McIntyre Publications

Wayne, M. L., Y.J. Pan, S. V. Nuzhdin and McIntyre L. M. 2004 Additivity and trans-acting effects on gene expression in male Drosophila simulans Genetics (In Press)

Verhoeven K., Simonsen K., McIntyre L. M. Implementing false discovery rate control: increasing your power Oikos (In press).

Coffman C. , Doerge R, Simonsen K., Nichols K., Duarte C., Wolfinger R, McIntyre L.M. Model Selection in Binary Trait Locus Mapping. Genetics (accepted)

Fowler, V G Sakoulas, L. M. McIntyre, V. Meka, R D. Arbeit, C H. Cabell, M E. Stryjewski, G. M. Eliopoulos, L. B. Reller, G. R. Corey,1 T. .Jones5, N. Lucindo, M R. Yeaman5,6,A S. Bayer. 2004 Persistent Bacteremia in Methicillin-Resistant Staphylococcus aureus Bloodstream Infections is Associated with agr Dysfunction and Low-Level In vitro Resistance to Thrombin -Induced Platelet Microbicidal Protein JID J Infect Dis. 190(6):1140-9.

Sergey V. Nuzhdin, Marta L. Wayne, Kristy L. Harmon, and L. M. McIntyre 2004 Common pattern of evolution of gene expression level and protein sequence in Drosophila Molecular Biology and Evolution 21(7):1308-17

Hong Li, A K. Singh, L. M. McIntyre and A. Sherman 2004 Differential gene expression in response to hydrogen peroxide and the putative PerR regulon of Synechocystis sp. Strain PCC 6803 J. of Bacteriology 186 (11): 3331-3345

Pedra, JHF, L. M. McIntyre, M.E. Scharf and B. Pittendrigh 2004 Genome-wide transcription profile of field and laboratory selected DDT resistant Drosophila PNAS 101(18):7034-7039

Simonsen, K, L M. McIntyre, 2004 Using alpha wisely: Improving power to detect multiple QTL. Statistical Applications in Genetics and Molecular Biology Vol: 3 No Article 1

Pirttilä, A. M., L. M. McIntyre, G. A., Payne and C. P. Woloshuk. 2004 Comparison of expression profiles associate gene tags with fumonisin biosynthesis in wild type and fcc1 mutant of Fusarium verticillioides 2 Fungal Genetics and Biology 41(6): 647-656

C. Coffman, R. Doerge, M. Wayne, L. McIntyre. 2003. Intersection tests for single marker QTL analysis can be more powerful than two marker QTL analysis. BMC Genetics 4:10.

A.Singh, L. McIntyre, and L. Sherman. 2003. Microarray Analysis of the Genome-wide Response to Iron Deficiency and Iron Reconstitution in the Cyanobacterium Synechocystis sp. PCC 6803 Plant Physiology 132 (4): 1825-1839.

Brett Lahner, Jiming Gong, Mehrzad Mahmoudian, Ellen L Smith, Khush B Abid,Elizabeth E Rogers, Mary L Guerinot, Jeffrey F Harper, John M Ward, Lauren McIntyre, Julian I Schroeder & David E Salt 2003. Genomic scale profiling of nutrient and trace elements in Arabidopsis thaliana Nature Biotechnology 21 (10): pp 1215 1221

Tao Jin, Maria Bokarewa, Lauren McIntyre, Andrej Tarkowski, G. Ralph Corey, L. Barth Reller, and Vance G. Fowler, Jr. Fatal Outcome Of Bacteremic Patients Caused By Infection With Staphylokinase Deficient Staphylococcus aureus 2003 JMM. 52: 919-923.

Pirttilä, A. M., McIntyre, L. M. , Payne, G. A., and Woloshuk, C. P. Comparison of expression profiles associate gene tags with fumonisin biosynthesis in wild type and fcc1 mutant of Fusarium verticillioides 2 Fungal Genetics and Biology (accepted pending minor revision)

Moody, D.E., Z. Zou, L. McIntyre (2002) Cross-species hybridization of pig RNA to human nylon microarrays. BMC Genomics 3:27.

M. Wayne and L. McIntyre (2002) Combining Mapping and Arraying: A novel approach to candidate gene identification. PNAS 99: 14903-14906.

Moody, D. B. Fadlia, A. Singh, S. Shah, L. McIntyre (2002) Quantitative Comparison of Image Analysis Software. DNA Press 155-166.

Oddone, E. R. Horner, A. Ward, K. Steuchuchack, L. McIntyre, D. Pitterle, J. Whittle(2002) Carotid endarterectomy and race: Do clinical indications and patient preferences account for differences? Stroke 33(12):2936-43

G. Bepler, A. Gautam, L. McIntyre, A. F. Beck, D. Chervinsky, Y.C. Kim, D. Pitterle, A. Hyland (2002) Prognostic Significance of Molecular Genetic Aberrations on Chromosome Segment 11p15.5 in Non-Small-Cell Lung Cancer J Clin. Oncol. 20(5):1353-60

Vermerris, W., K. Thompson, L. McIntyre, J. Axtell (2002) Evidence for an evolutionarily conserved interaction between cell wall biosynthesis and flowering in maize and sorghum. BMC Evol. Biol. 2(1).

Vermerris, W., K. Thompson, L. McIntyre (2002) The maize Brown midrib locus affects cell wall composition and plant development in a dose dependent manner. Heredity 88(6):450-7.

L. McIntyre, K. O'Briant, C. McBride, G. Bepler (2001) Rater Agreement and the Utility of the Mutagen-Induced Chromosome Damage Assay. Anticancer Research 21:605-610.

B. M. Peck, D. A. Asch, S. D. Goold, D. L. Roter, P. A. Ubel, L. McIntyre, K. H. Abbott, J. Hoff, C. M. Koropchak, and J. A. Tulsky (2001) Measuring Patient Expectations: Does the Instrument Affect Satisfaction or Expectations? Medical Care (39(1):100-8)

L. McIntyre, C. Coffman, R. Doerge (2001) Detection and Location of Single Binary Trait Loci in Experimental Populations. Genetical Research 78:79-92.

C. McBride, S. Halabi, G. Bepler, P. Lyna, L. McIntyre, I. Lipkus, J. Albright, K. O'Briant (2001) Maximizing the Motivational Impact of Feedback of Lung cancer Susceptibility on Smokers desire to Quit. J. Health Commun 5:229-241.

B. M. Peck, D. A. Asch, S. D. Goold, D. L. Roter, P. A. Ubel, L. McIntyre, K. H. Abbott, J. A. Hoff, C. M. Koropchak, J. A. Tulsky (2001) Measuring Patient Expectations Does the Instrument Affect Satisfaction or Expectations? Medical Care 39(1):100-108

W. Demark-Wahnefried J. Schildkraut, D. Thompson, S. Lesko, L. McIntyre,P. Schwingl, D. Paulson, C. Robertson, E. Anderson, P. Walther (2000) Early Onset Baldness and Prostate Cancer Risk. Cancer Epidemiology, Biomarkers and Prevention 9: 325-328.

H. Bosworth, K. Parsey, M. Butterfield, L. McIntyre, E. Oddone, K. Stechuchak, L. Bastian (2000) Racial Variation in Wanting and Obtaining Mental Health Services Among Women Veterans in a Primary Care Clinic. Journal of the National Medical Association 92: 231-236.

K. Steinhauser, E.Clipp, M. McNeilly, N. Christakis, L. McIntyre, J. Tulsky (2000) In Search of a Good Death: Observations of Patients, Families and Providers. Annals of Internal Medicine 132:825-832.

L. McIntyre, E. Martin, K. Simonsen, N. Kaplan (2000) Circumventing Multiple Testing: A Multilocus Monte Carlo Approach to Testing for Association. Genetic Epidemiology 19:18-29.

A. Oberg, J. Ferguson, L. McIntyre, R. Horner (2000) Incidence of Stroke and Season of the Year:Evidence of an Association. American Journal of Epidemiology 152: 558-564.

V. G. Fowler, Jr., L. McIntyre, M. R. Yeaman, G. E. Peterson,L. B. Reller, G. Corey, D. Wray, A. S. Bayer (2000) In Vitro Resistance to Thrombin-induced Platelet Microbicidal Protein in Isolates of Staphylococcus aureus from Endocarditis Patients Correlates with an Intravascular Device Source. Journal of Infectous Disease (182:1251-4)

C. Hulette, K. Welsh-Bohmer, M. Murray, A. Saunders, D. Mash, L. McIntyre (1999) Neuropathological changes in normal aging:Evidence for Preclinical Alzheimer Disease in Cognitively Normal Individuals. Journal of Neuropathology and Experimental Neurology 57: 1168-1174.

L. McIntyre, M. Butterfield, K. Nanda, K. Parsey, K. Stechuchak, A.McChesney,C. Koons, L. Bastian (1999) Validation of a Sexual Trauma Questionnaire in Veteran Women. Journal General Internal Medicine 14: 186-189.

 H. Hoenig, L. Branch, L. McIntyre, J. Hoff, R. Horner (1999) The Validity in Persons with Spinal Cord Injury of a Self-Reported Functional Measure (SRFM) Derived from the FIM. Spine 24: 539-544.

E. Oddone, R. Horner, R. Sloane, L. McIntyre, A. Ward,J. Whittle,L. Passman, L. Kroupa, R. Heaney, S. Diem, D. Matchar (1999) Race, Clinical Factors, and the Use of Carotid Artery Imaging and Carotid Endarterectomy for Symptomatic Patients. Stroke 30: 1350-1356.

W. Vermerris and L. McIntyre (1999) Time to Flowering in brown midrib mutants of maize: an alternative approach to the analysis of developmental traits. Heredity 83: 171-178.

E. Johnson, L. McIntyre, J. Hoff, G. Bepler (1999) The Effect of Orchiectomy on Lung Cancer Survival. Anticancer Research 19.

H. Hoenig, L. Branch, L. McIntyre,J. Hoff, R. Horner (1999) The Validity in Persons with Spinal Cord Injury of a Self-Reported Functional Measure Derived from the Functional Independence Measure. Spine 24: 539-544. 1999

H. Hoenig, L. McIntyre, J. Hoff, G. Samsa, L. Branch (1999) Disability Fingerprints:Patterns of Disability in Spinal Cord Injury and Multiple Sclerosis Differ. Journals of Gerontology 54: M613-620.

E. Oddone, R. Horner, T. Diers, J. Lipscomb, L. McIntyre,C. Coffman, J. Whittle,L. Passman, L. Patterson, R. Heaney, D. Matchar (1998) Understanding Racial Variation in the Utilization of Carotid Endarterectomy: Role of Aversion to Surgery. Journal of the National Medical Association 90: 25-33.

H. Hoenig, L. McIntyre, R. Sloane, L. Branch, A. Truncali, R. Horner (1998) The Reliability of a Self-Reported Measure of Disease, Impairment, and Function in Persons with Spinal Cord Dysfunction. Archives of Physical Medicine and Rehabilitation 79: 378-387.

M. Butterfield, L. McIntyre, K. Stechuchak, K. Nanda, L. Bastian (1998) Mental disorder Symptoms in Veteran Women: Impact of Physical and Sexual Assault. Journal American Medical Women's Association 53: 198-200.

L. McIntyre, B. Weir (1997) Hardy-Weinberg Testing for Continuous Data. Genetics 147: 1965-1975.

M. Butterfield, L. Bastian, L. McIntyre, C. Koons, M. Vollmer, B. Burns (1996) Screening for Mental Disorder Symptoms and a History of Sexual Trauma and Battering Among Women Using Primary Health Care Services. Journal of Clinical Outcomes Management 3: 55-61.

L. McIntyre (1994) Using Cigarette Data for an Introduction to Multiple Regression. Journal of Statistical Education 2 (1)