Score E
Sequences producing significant alignments: (bits) Value
emb|CAB51041.1| (AJ243883) putative transcription factor [P... 36 0.47
emb|CAB76563.1| (AJ276003) GAR1 protein [Homo sapiens] 36 0.62
pir||S12022 extensin - rape 36 0.62
gb|AAF50683.1| (AE003563) CG12330 gene product [Drosophila ... 35 1.1
pir||T09965 extensin CYC17 precursor - Madagascar periwinkl... 35 1.1
pir||PQ0479 pistil extensin-like protein (clone pMG14) - co... 35 1.1
gb|AAF47476.1| (AE003471) CG9184 gene product [Drosophila m... 35 1.1
sp|P06599|EXTN_DAUCA EXTENSIN PRECURSOR >gi|82047|pir||A243... 34 1.4
gb|AAD39332.1|AC007258_21 (AC007258) Hypothetical protein [... 34 1.4
gb|AAC69930.1| (AC005819) putative extensin [Arabidopsis th... 34 1.8
gb|AAF49404.1| (AE003526) CG9715 gene product [Drosophila m... 34 1.8
gb|AAF47912.1| (AE003481) CG13722 gene product [Drosophila ... 34 1.8
pir||S22697 extensin - Volvox carteri (fragment) >gi|21992|... 34 2.4
gb|AAC38245.1| (AF003947) 3-carboxy-cis,cis-muconate cycloi... 34 2.4
sp|P39055|DYN1_CAEEL DYNAMIN 33 3.1
pir||I46646 ryanodine receptor, skeletal muscle - pig >gi|1... 33 3.1
pir||I46645 ryanodine receptor - pig >gi|164646|gb|AAA31118... 33 3.1
sp|P16960|RYNR_PIG RYANODINE RECEPTOR, SKELETAL MUSCLE (SKE... 33 3.1
gb|AAB72228.2| (L29031) dynamin [Caenorhabditis elegans] 33 3.1
pir||T18860 hypothetical protein C02C6.1 - Caenorhabditis e... 33 3.1
pir||T20647 hypothetical protein F09C6.9 - Caenorhabditis e... 33 3.1
pir||T06782 extensin - soybean >gi|1165322|gb|AAB53156.1| (... 33 3.1
gb|AAD50438.1|AF167982_1 (AF167982) dynamin [Caenorhabditis... 33 3.1
gb|AAC00630.1| (AC002291) extensin [Arabidopsis thaliana] 33 3.1
pir||S18135 ryanodine receptor - pig (fragment) >gi|2136484... 33 3.1
emb|CAB62487.1| (AL133363) proline-rich protein [Arabidopsi... 33 3.1
pir||T07622 extensin homolog - soybean (fragment) >gi|34745... 33 3.1
gb|AAF60718.1| (AC024798) contains similarity to TR:Q9Z2V7 ... 33 3.1
pir||S61885 extensin precursor (clone 6PExt1.2) - wood tobacco 33 4.1
gb|AAA59163.1| (M94131) mucin [Homo sapiens] 33 4.1
pir||S71558 probable cell wall-plasma membrane linker prote... 33 4.1
ref|NP_002448.1| mucin 2, intestinal/tracheal >gi|2506877|s... 33 4.1
emb|CAA49808.1| (X70343) extensin [Nicotiana sylvestris] 33 4.1
pir||S71227 extensin 1 - Arabidopsis thaliana >gi|1167961|g... 33 4.1
gb|AAF51054.1| (AE003578) capu gene product [Drosophila mel... 33 4.1
gb|AAC47514.1| (U24189) RRM-type RNA binding protein [Caeno... 33 4.1
pir||A43932 mucin 2 precursor, intestinal - human (fragments) 33 4.1
sp|Q09442|YP85_CAEEL HYPOTHETICAL 40.9 KD PROTEIN C08B11.5 ... 33 4.1
gb|AAF03043.1| (AF098663) unknown [Glycine max] 33 4.1
pir||T07598 proline-rich protein GPP1 - potato >gi|3402282|... 33 4.1
emb|CAB60993.1| (Z46676) similar to Poly(A) RNA binding pro... 33 4.1
pir||JC5437 spliceosome-associated protein 49 - Caenorhabdi... 33 4.1
emb|CAA04822.1| (AJ001550) FMR2 protein [Homo sapiens] 32 5.4
gb|AAA99416.1| (L76569) fragile X E mental retardation synd... 32 5.4
gb|AAB69976.1| (AC005731) fragile X mental retardation prot... 32 5.4
gb|AAF55584.1| (AE003723) CG7709 gene product [Drosophila m... 32 5.4
gb|AAA87047.1| (U45958) pistil extensin-like protein [Nicot... 32 5.4
dbj|BAA23580.1| (AB001573) Me-FKH1 [Oryzias latipes] 32 5.4
ref|NP_009293.1| diaphanous 2 isoform 12C >gi|3171904|emb|C... 32 5.4
gb|AAD39890.1|AF106929_1 (AF106929) putative cell wall prot... 32 5.4
gb|AAF63169.1|AC010657_5 (AC010657) T5E21.13 [Arabidopsis t... 32 5.4
ref|NP_006720.1| diaphanous 2 isoform 156 >gi|6166119|sp|O6... 32 5.4
pir||T28770 hypothetical protein W03D2.1 - Caenorhabditis e... 32 5.4
gb|AAD55980.1|AF159297_1 (AF159297) extensin-like protein [... 32 5.4
ref|NP_002016.1| fragile X mental retardation 2 >gi|2228248... 32 5.4
sp|P51816|FMR2_HUMAN FRAGILE X MENTAL RETARDATION 2 PROTEIN... 32 5.4
sp|Q03211|EXLP_TOBAC PISTIL-SPECIFIC EXTENSIN-LIKE PROTEIN ... 32 7.0
sp|P16537|SPC3_STRPU SPEC3 PROTEIN >gi|280640|pir||A43696 S... 32 7.0
pir||A39369 homeotic protein BarH1 - fruit fly (Drosophila ... 32 7.0
pir||S16356 ovo protein - fruit fly (Drosophila melanogaster) 32 7.0
pir||T16038 hypothetical protein F11H8.4 - Caenorhabditis e... 32 7.0
gb|AAD11796.1| (AF104328) cell wall-plasma membrane linker ... 32 7.0
pir||S72273 actin-depolymerizing protein N-WASP, brain - bo... 32 7.0
gb|AAF46552.1| (AE003449) CG2971 gene product [Drosophila m... 32 7.0
gb|AAF68526.1|AF252743_1 (AF252743) ovo protein [Drosophila... 32 7.0
dbj|BAA92595.1| (AB037778) KIAA1357 protein [Homo sapiens] 32 7.0
gb|AAF47428.1| (AE003469) CG13903 gene product [Drosophila ... 32 7.0
pir||D41132 collagen-related protein 4 - Hydra magnipapilla... 32 7.0
sp|P51521|OVO_DROME OVO PROTEIN (SHAVEN BABY PROTEIN) >gi|1... 32 7.0
emb|CAB59301.1| (Y18252) protein kinase C [Botryotinia fuck... 32 7.0
gb|AAF46002.1| (AE003433) ovo gene product [alt 1] [Drosoph... 32 7.0
emb|CAB36921.1| (X59772) ovo protein [Drosophila melanogaster] 32 7.0
gb|AAC17501.1| (AF062008) unknown [Caenorhabditis elegans] 32 7.0
gb|AAF46003.1| (AE003433) ovo gene product [alt 2] [Drosoph... 32 7.0
gb|AAA53435.1| (L12695) engrailed protein [Gallus gallus] 32 9.2
gb|AAF04792.1| (AF159550) structural polyprotein [Eastern e... 32 9.2
pir||T09964 extensin CYC15 precursor - Madagascar periwinkl... 32 9.2
pir||T10863 extensin precursor - kidney bean >gi|727264|gb|... 32 9.2
dbj|BAA81795.1| (AB026542) WASP-family protein [Homo sapiens] 32 9.2
gb|AAF27679.1|AC018908_18 (AC018908) hypothetical protein [... 32 9.2
gb|AAC59867.2| (U37375) leucine zipper [Xenopus laevis] 32 9.2
gb|AAF58614.1| (AE003824) CG8986 gene product [Drosophila m... 32 9.2
ref|NP_008938.1| pre-mRNA cleavage factor Im (68kD) >gi|136... 32 9.2
gb|AAA32741.1| (L34685) cell wall protein [Arabidopsis thal... 32 9.2
gb|AAF46221.1| (AE003439) CG14431 gene product [Drosophila ... 32 9.2
gb|AAB61515.1| (AC000103) F21J9.13 [Arabidopsis thaliana] 32 9.2
sp|Q05916|HME1_CHICK HOMEOBOX PROTEIN ENGRAILED-1 (GG-EN-1) 32 9.2
pir||T13286 cappuccino gene protein - fruit fly (Drosophila... 32 9.2
ref|NP_006194.1| phosphodiesterase 4D, cAMP-specific (dunce... 32 9.2
>emb|CAB51041.1| (AJ243883) putative transcription factor [Periplaneta americana]
Length = 333
Score = 36.0 bits (81), Expect = 0.47
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = -3
Query: 793 PQKHKAVLWASVLRLAPSALSPVSPFKPPARNCPLPQEKKFGAPPPPPT 647
P K W+ V + +A +P+ P + PA N P K +PP PPT
Sbjct: 115 PTKKPTSAWSPVTASSTAARTPLVPIEIPASNLQQPARSKGVSPPVPPT 163
>emb|CAB76563.1| (AJ276003) GAR1 protein [Homo sapiens]
Length = 217
Score = 35.6 bits (80), Expect = 0.62
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = +3
Query: 624 GGSPYFLSVGGGGGAPNFFSWGRGQFRAGGLKG 722
G S +F GGGGG NF GRG F GG +G
Sbjct: 24 GSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRG 56
>pir||S12022 extensin - rape
Length = 299
Score = 35.6 bits (80), Expect = 0.62
Identities = 14/36 (38%), Positives = 18/36 (49%)
Frame = -3
Query: 730 PVSPFKPPARNCPLPQEKKFGAPPPPPTLKKYGDPP 623
PV + PP P P +K + PPP +K Y PP
Sbjct: 48 PVKHYSPPVYKSPPPPKKDYEYKSPPPPVKHYSPPP 83
>gb|AAF50683.1| (AE003563) CG12330 gene product [Drosophila melanogaster]
Length = 239
Score = 34.8 bits (78), Expect = 1.1
Identities = 19/41 (46%), Positives = 21/41 (50%), Gaps = 7/41 (17%)
Frame = -3
Query: 745 PSALSPVSPFKPPARNCPL-------PQEKKFGAPPPPPTLKKYGDPP 623
P+ PV P PP R P P +K G PPP P YG PP
Sbjct: 30 PATYLPVKPPAPPPRPPPPAPANSYGPPKKGNGKPPPAPPKPSYGPPP 77
>pir||T09965 extensin CYC17 precursor - Madagascar periwinkle
dbj|BAA13176.1| (D86854) extensin [Catharanthus roseus]
Length = 217
Score = 34.8 bits (78), Expect = 1.1
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -3
Query: 721 PFKPPARNCPLPQEKKFGAPPPPPTLKKYGDPP 623
P PP P P + +PPPPP + KY PP
Sbjct: 58 PPPPPIHKSPPPPPYVYKSPPPPPPVYKYKSPP 90
Score = 33.6 bits (75), Expect = 2.4
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 5/37 (13%)
Frame = -3
Query: 733 SPVSPFK-----PPARNCPLPQEKKFGAPPPPPTLKKYGDPP 623
SP P+ PP + P P K+ +PPPPP + K PP
Sbjct: 29 SPPPPYHYSSPPPPVHSPPPPPVYKYKSPPPPPPIHKSPPPP 70
>pir||PQ0479 pistil extensin-like protein (clone pMG14) - common tobacco
(fragment)
emb|CAA78393.1| (Z14015) pistil extensin like protein [Nicotiana tabacum]
Length = 393
Score = 34.8 bits (78), Expect = 1.1
Identities = 21/46 (45%), Positives = 25/46 (53%), Gaps = 2/46 (4%)
Frame = -3
Query: 760 VLRLAPSALSP-VSPFKPPARNC-PLPQEKKFGAPPPPPTLKKYGDPP 623
V R PS+ SP V P PP C P P ++ PPPPP K+ PP
Sbjct: 97 VNRPKPSSPSPPVKPPPPPPSPCKPSPPDQSTKQPPPPPPSKQPPPPP 144
>gb|AAF47476.1| (AE003471) CG9184 gene product [Drosophila melanogaster]
Length = 248
Score = 34.8 bits (78), Expect = 1.1
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -2
Query: 707 GPELSPPPRKEIWGPPPPP 651
GP PPP + WGPPPPP
Sbjct: 118 GPPAYPPPPQRPWGPPPPP 136
>sp|P06599|EXTN_DAUCA EXTENSIN PRECURSOR
pir||A24354 extensin precursor - carrot
emb|CAA26632.1| (X02873) put. precursor [Daucus carota]
prf||1111211A extensin [Daucus carota]
Length = 306
Score = 34.4 bits (77), Expect = 1.4
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Frame = -3
Query: 748 APSALSPVSPFK--PPARNCPLP-QEKKFGAPPPPPTLKKYGDPP 623
+P +PV +K PP ++ P P K+ +PPPP + KY PP
Sbjct: 103 SPPPPTPVYKYKSPPPPKHSPAPVHHYKYKSPPPPTPVYKYKSPP 147
>gb|AAD39332.1|AC007258_21 (AC007258) Hypothetical protein [Arabidopsis thaliana]
Length = 929
Score = 34.4 bits (77), Expect = 1.4
Identities = 21/40 (52%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Frame = -3
Query: 745 PSALSPVSPFKP---PARNCPLPQEKKFGA-PPPPPTLKKYGDP 626
PSA +P P P PA P P K GA PPPPP + K G P
Sbjct: 390 PSAAAPPPPPPPKKGPAAPPPPPPPGKKGAGPPPPPPMSKKGPP 433
>gb|AAC69930.1| (AC005819) putative extensin [Arabidopsis thaliana]
Length = 394
Score = 34.0 bits (76), Expect = 1.8
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -3
Query: 724 SPF-KPPARNCPLPQEKKFGAPPPPPTLKKYGDPP 623
SP+ PP+R+ P K PPPPP Y PP
Sbjct: 91 SPYHSPPSRHMSPPTPPKAATPPPPPPRSSYTSPP 125
>gb|AAF49404.1| (AE003526) CG9715 gene product [Drosophila melanogaster]
Length = 1700
Score = 34.0 bits (76), Expect = 1.8
Identities = 15/31 (48%), Positives = 18/31 (57%)
Frame = -3
Query: 730 PVSPFKPPARNCPLPQEKKFGAPPPPPTLKK 638
P SP K P PLP ++ APPPPP + K
Sbjct: 1481 PQSPSKGPPSPTPLPPVRQDMAPPPPPKMSK 1511
>gb|AAF47912.1| (AE003481) CG13722 gene product [Drosophila melanogaster]
Length = 707
Score = 34.0 bits (76), Expect = 1.8
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = -3
Query: 745 PSALSPVSPFKPPARNCPLPQEKKFGAPPPPPTLKKYGDPP 623
P +P + PP P P PPPPP KKY PP
Sbjct: 186 PPPTAPPQKYLPPVTTTPAP-------PPPPPPTKKYLPPP 219
Score = 32.1 bits (71), Expect = 7.0
Identities = 17/36 (47%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = -3
Query: 730 PVSPFKPPARNCP--LPQEKKFGAPPPPPTLKKYGDPP 623
P PF PP LP APPPPP KY PP
Sbjct: 591 PAIPFPPPTAPPQKYLPPVTTTQAPPPPPPTSKYLPPP 628
Score = 32.1 bits (71), Expect = 7.0
Identities = 17/36 (47%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = -3
Query: 730 PVSPFKPPARNCP--LPQEKKFGAPPPPPTLKKYGDPP 623
P PF PP LP APPPPP KY PP
Sbjct: 543 PAIPFPPPTAPPQKYLPPVTTTQAPPPPPPTSKYLPPP 580
>pir||S22697 extensin - Volvox carteri (fragment)
emb|CAA46283.1| (X65165) extensin [Volvox carteri]
Length = 464
Score = 33.6 bits (75), Expect = 2.4
Identities = 16/44 (36%), Positives = 19/44 (42%)
Frame = -3
Query: 748 APSALSPVSPFKPPARNCPLPQEKKFGAPPPPPTLKKYGDPPGA 617
+P SP P PP R P P + PPPP + PP A
Sbjct: 330 SPPPPSPPPPSPPPPRPSPSPPPPRSSPSPPPPVVSPPPPPPRA 373
>gb|AAC38245.1| (AF003947) 3-carboxy-cis,cis-muconate cycloisomerase homolog
[Rhodococcus opacus]
Length = 450
Score = 33.6 bits (75), Expect = 2.4
Identities = 22/62 (35%), Positives = 30/62 (47%), Gaps = 3/62 (4%)
Frame = -2
Query: 494 GMYDEMQAKTAGRWGFDWQLASDELMRD---VADV*LEYGVTVGHPKCRRRHLDVTPRLL 324
G D Q + AG W +W+ +D L VA + G HP R+LD+T LL
Sbjct: 314 GSMDHEQQRAAGAWHAEWETLTDLLRLTGGAVARIADSLGGLNVHPDAMARNLDITGGLL 373
Query: 323 LRQIV 309
L + V
Sbjct: 374 LAERV 378
>sp|P39055|DYN1_CAEEL DYNAMIN
Length = 865
Score = 33.2 bits (74), Expect = 3.1
Identities = 19/42 (45%), Positives = 21/42 (49%), Gaps = 3/42 (7%)
Frame = -3
Query: 745 PSALSPV---SPFKPPARNCPLPQEKKFGAPPPPPTLKKYGDPPG 620
PS SPV +P P R P+P GAPPPP G P G
Sbjct: 760 PSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGG 804
>pir||I46646 ryanodine receptor, skeletal muscle - pig
gb|AAA31119.1| (M91452) ryanodine receptor [Sus scrofa]
Length = 5035
Score = 33.2 bits (74), Expect = 3.1
Identities = 14/29 (48%), Positives = 16/29 (54%)
Frame = -3
Query: 694 PLPQEKKFGAPPPPPTLKKYGDPPGAEIW 608
P P+ K APPPPP K+ G G E W
Sbjct: 4511 PPPEPPKKTAPPPPPPKKEEGGSGGLEFW 4539
>pir||I46645 ryanodine receptor - pig
gb|AAA31118.1| (M91451) ryanodine receptor [Sus scrofa]
Length = 5035
Score = 33.2 bits (74), Expect = 3.1
Identities = 14/29 (48%), Positives = 16/29 (54%)
Frame = -3
Query: 694 PLPQEKKFGAPPPPPTLKKYGDPPGAEIW 608
P P+ K APPPPP K+ G G E W
Sbjct: 4511 PPPEPPKKTAPPPPPPKKEEGGSGGLEFW 4539
>sp|P16960|RYNR_PIG RYANODINE RECEPTOR, SKELETAL MUSCLE (SKELETAL MUSCLE CALCIUM RELEASE
CHANNEL)
Length = 5035
Score = 33.2 bits (74), Expect = 3.1
Identities = 14/29 (48%), Positives = 16/29 (54%)
Frame = -3
Query: 694 PLPQEKKFGAPPPPPTLKKYGDPPGAEIW 608
P P+ K APPPPP K+ G G E W
Sbjct: 4511 PPPEPPKKTAPPPPPPKKEEGGSGGLEFW 4539
>gb|AAB72228.2| (L29031) dynamin [Caenorhabditis elegans]
Length = 830
Score = 33.2 bits (74), Expect = 3.1
Identities = 19/42 (45%), Positives = 21/42 (49%), Gaps = 3/42 (7%)
Frame = -3
Query: 745 PSALSPV---SPFKPPARNCPLPQEKKFGAPPPPPTLKKYGDPPG 620
PS SPV +P P R P+P GAPPPP G P G
Sbjct: 760 PSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGG 804
>pir||T18860 hypothetical protein C02C6.1 - Caenorhabditis elegans
emb|CAB01857.1| (Z79596) Identity to C.elegans dynamin (SW:DYN1_CAEEL)~cDNA EST
EMBL:D37360 comes from this gene [Caenorhabditis
elegans]
Length = 830
Score = 33.2 bits (74), Expect = 3.1
Identities = 19/42 (45%), Positives = 21/42 (49%), Gaps = 3/42 (7%)
Frame = -3
Query: 745 PSALSPV---SPFKPPARNCPLPQEKKFGAPPPPPTLKKYGDPPG 620
PS SPV +P P R P+P GAPPPP G P G
Sbjct: 760 PSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGG 804
>pir||T20647 hypothetical protein F09C6.9 - Caenorhabditis elegans
emb|CAB04069.1| (Z81496) predicted using Genefinder~similar to nuclear hormone
receptor [Caenorhabditis elegans]
Length = 466
Score = 33.2 bits (74), Expect = 3.1
Identities = 14/37 (37%), Positives = 22/37 (58%), Gaps = 3/37 (8%)
Frame = -3
Query: 709 PARNCPLPQEKKFGAPPPPPTLKKYGDP---PGAEIWLCF 599
P + CP+ ++K PPP P+ K+G P P + W+ F
Sbjct: 234 PMKECPIRSDQKKLPPPPHPSSAKFGGPKHNPDRKQWMYF 273
>pir||T06782 extensin - soybean
gb|AAB53156.1| (U44838) extensin [Glycine max]
Length = 432
Score = 33.2 bits (74), Expect = 3.1
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = -3
Query: 745 PSALSPVSPFK--PPARNCPLPQEKKFGAPPPPPTLKKYGDPP 623
PS PV +K PP P P + P PPP + KY PP
Sbjct: 368 PSPPPPVYKYKSPPPPYKYPSPPPPPYKYPSPPPPVYKYKSPP 410
Score = 33.2 bits (74), Expect = 3.1
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = -3
Query: 745 PSALSPVSPFK--PPARNCPLPQEKKFGAPPPPPTLKKYGDPP 623
PS PV +K PP P P + P PPP + KY PP
Sbjct: 222 PSPPPPVYKYKSPPPPYKYPSPPPPPYKYPSPPPPVYKYKSPP 264
>gb|AAD50438.1|AF167982_1 (AF167982) dynamin [Caenorhabditis elegans]
Length = 838
Score = 33.2 bits (74), Expect = 3.1
Identities = 19/42 (45%), Positives = 21/42 (49%), Gaps = 3/42 (7%)
Frame = -3
Query: 745 PSALSPV---SPFKPPARNCPLPQEKKFGAPPPPPTLKKYGDPPG 620
PS SPV +P P R P+P GAPPPP G P G
Sbjct: 760 PSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGG 804
>gb|AAC00630.1| (AC002291) extensin [Arabidopsis thaliana]
Length = 373
Score = 33.2 bits (74), Expect = 3.1
Identities = 19/41 (46%), Positives = 21/41 (50%), Gaps = 8/41 (19%)
Frame = -3
Query: 745 PSALSPVSPFK----PPARNCPLPQEKKFGAPP----PPPTLKKYGDPP 623
P SP P K PP P P K + PP PPP +K Y PP
Sbjct: 109 PVYKSPPPPVKHYSPPPVYKSPPPPVKHYSPPPVYKSPPPPVKHYSPPP 157
Score = 32.8 bits (73), Expect = 4.1
Identities = 19/41 (46%), Positives = 21/41 (50%), Gaps = 8/41 (19%)
Frame = -3
Query: 745 PSALSPVSPFK----PPARNCPLPQEKKFGAPP----PPPTLKKYGDPP 623
P SP P K PP P P K + PP PPP +K Y PP
Sbjct: 173 PVYKSPPPPVKHYSPPPVYKSPPPPVKYYSPPPVYKSPPPPVKHYSPPP 221
Score = 32.8 bits (73), Expect = 4.1
Identities = 19/41 (46%), Positives = 21/41 (50%), Gaps = 8/41 (19%)
Frame = -3
Query: 745 PSALSPVSPFK----PPARNCPLPQEKKFGAPP----PPPTLKKYGDPP 623
P SP P K PP P P K + PP PPP +K Y PP
Sbjct: 189 PVYKSPPPPVKYYSPPPVYKSPPPPVKHYSPPPVYKSPPPPVKYYSPPP 237
Score = 32.8 bits (73), Expect = 4.1
Identities = 19/41 (46%), Positives = 21/41 (50%), Gaps = 8/41 (19%)
Frame = -3
Query: 745 PSALSPVSPFK----PPARNCPLPQEKKFGAPP----PPPTLKKYGDPP 623
P SP P K PP P P K + PP PPP +K Y PP
Sbjct: 141 PVYKSPPPPVKHYSPPPVYKSPPPPVKYYSPPPVYKSPPPPVKHYSPPP 189
>pir||S18135 ryanodine receptor - pig (fragment)
pir||I47133 calcium release channel - pig (fragment)
emb|CAA44674.1| (X62880) calcium release channel [Sus scrofa]
Length = 5034
Score = 33.2 bits (74), Expect = 3.1
Identities = 14/29 (48%), Positives = 16/29 (54%)
Frame = -3
Query: 694 PLPQEKKFGAPPPPPTLKKYGDPPGAEIW 608
P P+ K APPPPP K+ G G E W
Sbjct: 4510 PPPEPPKKTAPPPPPPKKEEGGSGGLEFW 4538
>emb|CAB62487.1| (AL133363) proline-rich protein [Arabidopsis thaliana]
Length = 265
Score = 33.2 bits (74), Expect = 3.1
Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = -3
Query: 793 PQKHKAVLWASVLRLAPSALSPVSPFKPPARNCPLPQEKKFGAPP--PPPTLKKYGDPP 623
P K+ S+ P SP PP + P P KK + P PPPT KK PP
Sbjct: 102 PTPKKSPSPPSLTPFVPHPTPKKSPSPPPTPSLPPPAPKKSPSTPSLPPPTPKKSPPPP 160
>pir||T07622 extensin homolog - soybean (fragment)
gb|AAA33970.1| (L22029) hydroxyproline-rich glycoprotein [Glycine max]
Length = 199
Score = 33.2 bits (74), Expect = 3.1
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = -3
Query: 745 PSALSPVSPFK--PPARNCPLPQEKKFGAPPPPPTLKKYGDPP 623
PS PV +K PP P P + P PPP + KY PP
Sbjct: 155 PSPPPPVYKYKSPPPPYKYPSPPPPPYKYPSPPPPVYKYKSPP 197
Score = 33.2 bits (74), Expect = 3.1
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = -3
Query: 745 PSALSPVSPFK--PPARNCPLPQEKKFGAPPPPPTLKKYGDPP 623
PS PV +K PP P P + P PPP + KY PP
Sbjct: 9 PSPPPPVYKYKSPPPPYKYPSPPPPPYKYPSPPPPVYKYKSPP 51
Score = 31.7 bits (70), Expect = 9.2
Identities = 15/36 (41%), Positives = 18/36 (49%), Gaps = 2/36 (5%)
Frame = -3
Query: 730 PVSPFK--PPARNCPLPQEKKFGAPPPPPTLKKYGDPP 623
PV +K PP P P + P PPP + KY PP
Sbjct: 131 PVYKYKSPPPPHKYPSPPPPPYKYPSPPPPVYKYKSPP 168
>gb|AAF60718.1| (AC024798) contains similarity to TR:Q9Z2V7 [Caenorhabditis
elegans]
Length = 1164
Score = 33.2 bits (74), Expect = 3.1
Identities = 16/36 (44%), Positives = 17/36 (46%)
Frame = -3
Query: 730 PVSPFKPPARNCPLPQEKKFGAPPPPPTLKKYGDPP 623
P+ P PP PLPQ PPPPP G PP
Sbjct: 532 PIPPPPPP----PLPQNLSGAPPPPPPPPPMLGGPP 563
>pir||S61885 extensin precursor (clone 6PExt1.2) - wood tobacco
Length = 139
Score = 32.8 bits (73), Expect = 4.1
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -3
Query: 721 PFKPPARNCPLPQEKKFGAPPPPPTLKKYGDPP 623
P PP P P K+ +PPPPP + K PP
Sbjct: 86 PPPPPVYKSPPPPVYKYKSPPPPPPVYKSPPPP 118
>gb|AAA59163.1| (M94131) mucin [Homo sapiens]
Length = 1270
Score = 32.8 bits (73), Expect = 4.1
Identities = 33/113 (29%), Positives = 49/113 (43%), Gaps = 7/113 (6%)
Frame = +2
Query: 299 SVFRLFASKVD------AVLRQGASCDTSGDRQ*PRIPVKHRLRPSSAHRLPVASRIPNG 460
SVF + SKVD A + SCDT GD + V + + V R P+
Sbjct: 432 SVFSICHSKVDPKPFYEACVHDSCSCDTGGDCECFCSAVASYAQECTKEGACVFWRTPDL 491
Query: 461 QQSWLAFHRTYHRISWD-KCAGGRVLVXCSRISGCMLYSNATDTYLFEAEPNFCSRGIPI 637
+ ++ H W + G R C I+G ++SN + +YL P C + PI
Sbjct: 492 CPIFCDYYNPPHECEWHYEPCGNRSFETCRTING--IHSNISVSYLEGCYPR-CPKDRPI 548
>pir||S71558 probable cell wall-plasma membrane linker protein PRP precursor -
rape
emb|CAA64425.1| (X94976) cell wall-plasma membrane linker protein [Brassica napus]
Length = 376
Score = 32.8 bits (73), Expect = 4.1
Identities = 18/35 (51%), Positives = 19/35 (53%), Gaps = 1/35 (2%)
Frame = -3
Query: 730 PVSPFKPPARNCPLPQEKKFGAPP-PPPTLKKYGDP 626
PV P KPPA P P K PP PPTLK + P
Sbjct: 43 PVKPPKPPAAKPPKPPAVKPPKPPTKPPTLKPHPHP 78
>ref|NP_002448.1| mucin 2, intestinal/tracheal
sp|Q02817|MUC2_HUMAN MUCIN 2 PRECURSOR (INTESTINAL MUCIN 2)
gb|AAB95295.1| (L21998) mucin [Homo sapiens]
Length = 5179
Score = 32.8 bits (73), Expect = 4.1
Identities = 33/113 (29%), Positives = 49/113 (43%), Gaps = 7/113 (6%)
Frame = +2
Query: 299 SVFRLFASKVD------AVLRQGASCDTSGDRQ*PRIPVKHRLRPSSAHRLPVASRIPNG 460
SVF + SKVD A + SCDT GD + V + + V R P+
Sbjct: 1057 SVFSICHSKVDPKPFYEACVHDSCSCDTGGDCECFCSAVASYAQECTKEGACVFWRTPDL 1116
Query: 461 QQSWLAFHRTYHRISWD-KCAGGRVLVXCSRISGCMLYSNATDTYLFEAEPNFCSRGIPI 637
+ ++ H W + G R C I+G ++SN + +YL P C + PI
Sbjct: 1117 CPIFCDYYNPPHECEWHYEPCGNRSFETCRTING--IHSNISVSYLEGCYPR-CPKDRPI 1173
>emb|CAA49808.1| (X70343) extensin [Nicotiana sylvestris]
Length = 131
Score = 32.8 bits (73), Expect = 4.1
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -3
Query: 721 PFKPPARNCPLPQEKKFGAPPPPPTLKKYGDPP 623
P PP P P K+ +PPPPP + K PP
Sbjct: 78 PPPPPVYKSPPPPVYKYKSPPPPPPVYKSPPPP 110
>pir||S71227 extensin 1 - Arabidopsis thaliana
gb|AAA85899.1| (U43627) extensin [Arabidopsis thaliana]
Length = 284
Score = 32.8 bits (73), Expect = 4.1
Identities = 19/41 (46%), Positives = 21/41 (50%), Gaps = 8/41 (19%)
Frame = -3
Query: 745 PSALSPVSPFK----PPARNCPLPQEKKFGAPP----PPPTLKKYGDPP 623
P SP P K PP P P K + PP PPP +K Y PP
Sbjct: 85 PVYKSPPPPVKHYSPPPVYKSPPPPVKYYSPPPVYKSPPPPVKHYSPPP 133
Score = 32.8 bits (73), Expect = 4.1
Identities = 19/41 (46%), Positives = 21/41 (50%), Gaps = 8/41 (19%)
Frame = -3
Query: 745 PSALSPVSPFK----PPARNCPLPQEKKFGAPP----PPPTLKKYGDPP 623
P SP P K PP P P K + PP PPP +K Y PP
Sbjct: 101 PVYKSPPPPVKYYSPPPVYKSPPPPVKHYSPPPVYKSPPPPVKYYSPPP 149
Score = 31.7 bits (70), Expect = 9.2
Identities = 18/41 (43%), Positives = 21/41 (50%), Gaps = 8/41 (19%)
Frame = -3
Query: 745 PSALSPVSPFK----PPARNCPLPQEKKFGAPP----PPPTLKKYGDPP 623
P SP P K PP P P + + PP PPP +K Y PP
Sbjct: 53 PVYKSPPPPVKHYSPPPVYKSPPPPVRYYSPPPVYKSPPPPVKHYSPPP 101
>gb|AAF51054.1| (AE003578) capu gene product [Drosophila melanogaster]
Length = 1059
Score = 32.8 bits (73), Expect = 4.1
Identities = 17/41 (41%), Positives = 21/41 (50%), Gaps = 1/41 (2%)
Frame = -3
Query: 745 PSALSPVSPFKPPARNCPL-PQEKKFGAPPPPPTLKKYGDPP 623
P A++P P PP + + P PPPPP L YG PP
Sbjct: 480 PHAVAPPPPPPPPPLHAFVAPPPPPPPPPPPPPPLANYGAPP 521
>gb|AAC47514.1| (U24189) RRM-type RNA binding protein [Caenorhabditis elegans]
Length = 398
Score = 32.8 bits (73), Expect = 4.1
Identities = 13/28 (46%), Positives = 14/28 (49%)
Frame = -2
Query: 704 PELSPPPRKEIWGPPPPPDA*EIWGSPG 621
P PPP +W PPPPP G PG
Sbjct: 295 PRPPPPPSSGMWPPPPPPPPGRTPGPPG 322
>pir||A43932 mucin 2 precursor, intestinal - human (fragments)
Length = 3020
Score = 32.8 bits (73), Expect = 4.1
Identities = 33/113 (29%), Positives = 49/113 (43%), Gaps = 7/113 (6%)
Frame = +2
Query: 299 SVFRLFASKVD------AVLRQGASCDTSGDRQ*PRIPVKHRLRPSSAHRLPVASRIPNG 460
SVF + SKVD A + SCDT GD + V + + V R P+
Sbjct: 1057 SVFSICHSKVDPKPFYEACVHDSCSCDTGGDCECFCSAVASYAQECTKEGACVFWRTPDL 1116
Query: 461 QQSWLAFHRTYHRISWD-KCAGGRVLVXCSRISGCMLYSNATDTYLFEAEPNFCSRGIPI 637
+ ++ H W + G R C I+G ++SN + +YL P C + PI
Sbjct: 1117 CPIFCDYYNPPHECEWHYEPCGNRSFETCRTING--IHSNISVSYLEGCYPR-CPKDRPI 1173
>sp|Q09442|YP85_CAEEL HYPOTHETICAL 40.9 KD PROTEIN C08B11.5 IN CHROMOSOME II
pir||T19069 hypothetical protein C08B11.5 - Caenorhabditis elegans
Length = 379
Score = 32.8 bits (73), Expect = 4.1
Identities = 13/28 (46%), Positives = 14/28 (49%)
Frame = -2
Query: 704 PELSPPPRKEIWGPPPPPDA*EIWGSPG 621
P PPP +W PPPPP G PG
Sbjct: 285 PRPPPPPSSGMWPPPPPPPPGRTPGPPG 312
>gb|AAF03043.1| (AF098663) unknown [Glycine max]
Length = 102
Score = 32.8 bits (73), Expect = 4.1
Identities = 16/37 (43%), Positives = 20/37 (53%)
Frame = -3
Query: 733 SPVSPFKPPARNCPLPQEKKFGAPPPPPTLKKYGDPP 623
SP P+K P P P +K + P PPP + KY PP
Sbjct: 21 SPPPPYKYPFP--PPPPKKPYKYPSPPPPVYKYKSPP 55
>pir||T07598 proline-rich protein GPP1 - potato
emb|CAA04449.1| (AJ000997) proline-rich protein [Solanum tuberosum]
Length = 491
Score = 32.8 bits (73), Expect = 4.1
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -3
Query: 730 PVSPFKPPARNCPLPQEKKFGAPPPPPTLKKYGDPP 623
PV +KP + P+P K PPP PT K +PP
Sbjct: 269 PVPVYKPKPKPPPVPVYKPKPKPPPVPTYKPKPEPP 304
>emb|CAB60993.1| (Z46676) similar to Poly(A) RNA binding protein~cDNA EST
EMBL:D65752 comes from this gene~cDNA EST EMBL:D69301
comes from this gene~cDNA EST EMBL:C11188 comes from
this gene~cDNA EST EMBL:C13204 comes from this gene~cDNA
EST EMBL:C07735 comes from this>
Length = 389
Score = 32.8 bits (73), Expect = 4.1
Identities = 13/28 (46%), Positives = 14/28 (49%)
Frame = -2
Query: 704 PELSPPPRKEIWGPPPPPDA*EIWGSPG 621
P PPP +W PPPPP G PG
Sbjct: 295 PRPPPPPSSGMWPPPPPPPPGRTPGPPG 322
>pir||JC5437 spliceosome-associated protein 49 - Caenorhabditis elegans
Length = 388
Score = 32.8 bits (73), Expect = 4.1
Identities = 13/28 (46%), Positives = 14/28 (49%)
Frame = -2
Query: 704 PELSPPPRKEIWGPPPPPDA*EIWGSPG 621
P PPP +W PPPPP G PG
Sbjct: 285 PRPPPPPSSGMWPPPPPPPPGRTPGPPG 312
>emb|CAA04822.1| (AJ001550) FMR2 protein [Homo sapiens]
Length = 1272
Score = 32.5 bits (72), Expect = 5.4
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 7/58 (12%)
Frame = -3
Query: 796 IPQKHKAVLWASVLRLAPSALSPVSPFKPP-------ARNCPLPQEKKFGAPPPPPTLKK 638
IP+K + + A+ + L P +SP P KPP +R +E+K PP P +
Sbjct: 825 IPEKKQRLEEATTICLLPPCISPAPPHKPPNTRENNSSRRANRRKEEKLFPPPLSPLPE- 883
Query: 637 YGDPP 623
DPP
Sbjct: 884 --DPP 886
>gb|AAA99416.1| (L76569) fragile X E mental retardation syndrome protein [Homo
sapiens]
Length = 1276
Score = 32.5 bits (72), Expect = 5.4
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 7/58 (12%)
Frame = -3
Query: 796 IPQKHKAVLWASVLRLAPSALSPVSPFKPP-------ARNCPLPQEKKFGAPPPPPTLKK 638
IP+K + + A+ + L P +SP P KPP +R +E+K PP P +
Sbjct: 831 IPEKKQRLEEATTICLLPPCISPAPPHKPPNTRENNSSRRANRRKEEKLFPPPLSPLPE- 889
Query: 637 YGDPP 623
DPP
Sbjct: 890 --DPP 892
>gb|AAB69976.1| (AC005731) fragile X mental retardation protein [Homo sapiens]
Length = 790
Score = 32.5 bits (72), Expect = 5.4
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 7/58 (12%)
Frame = -3
Query: 796 IPQKHKAVLWASVLRLAPSALSPVSPFKPP-------ARNCPLPQEKKFGAPPPPPTLKK 638
IP+K + + A+ + L P +SP P KPP +R +E+K PP P +
Sbjct: 345 IPEKKQRLEEATTICLLPPCISPAPPHKPPNTRENNSSRRANRRKEEKLFPPPLSPLPE- 403
Query: 637 YGDPP 623
DPP
Sbjct: 404 --DPP 406
>gb|AAF55584.1| (AE003723) CG7709 gene product [Drosophila melanogaster]
Length = 950
Score = 32.5 bits (72), Expect = 5.4
Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 9/43 (20%)
Frame = -3
Query: 745 PSALSPVSPFKPPARNCPLPQEKK---------FGAPPPPPTLKKYGDPPGA 617
PS+ P +P P PQ KK +GAP P P + YG PP A
Sbjct: 195 PSSSYGPPPSRPSQSYGPPPQAKKPHHRRPSSSYGAPRPAPPSQSYGAPPSA 246
>gb|AAA87047.1| (U45958) pistil extensin-like protein [Nicotiana alata]
Length = 430
Score = 32.5 bits (72), Expect = 5.4
Identities = 17/41 (41%), Positives = 19/41 (45%)
Frame = -3
Query: 745 PSALSPVSPFKPPARNCPLPQEKKFGAPPPPPTLKKYGDPP 623
P A SP +PP + P P K PPPPP Y PP
Sbjct: 208 PRAPSPSPATQPPTKQPPPPPRAKKSPPPPPPPPVAY--PP 246
>dbj|BAA23580.1| (AB001573) Me-FKH1 [Oryzias latipes]
Length = 377
Score = 32.5 bits (72), Expect = 5.4
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -3
Query: 772 LWASVLRLAPSALSPVSPFKPPARNCPLPQEKKFGAPPPPPTLKKYGDPP 623
LW ++ ++++ +SP PP CPL APPPP ++ PP
Sbjct: 312 LWTALSCHPRTSIAHLSPCPPPPPPCPLGDLLLKPAPPPPVLSQQLPPPP 361
>ref|NP_009293.1| diaphanous 2 isoform 12C
emb|CAA75869.1| (Y15908) DIA-12C protein [Homo sapiens]
Length = 1096
Score = 32.5 bits (72), Expect = 5.4
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
Frame = -3
Query: 733 SPVSPFKPPARNC-----PLPQEKKFGAPPPPPTLKKYGDPPGAEI 611
+P+ P PP P P FG PPPPP L PPG +
Sbjct: 575 APLPPPPPPLPGMMGIPPPPPPPLLFGGPPPPPPLGGVPPPPGISL 620
>gb|AAD39890.1|AF106929_1 (AF106929) putative cell wall protein [Medicago truncatula]
Length = 191
Score = 32.5 bits (72), Expect = 5.4
Identities = 18/38 (47%), Positives = 20/38 (52%)
Frame = -3
Query: 763 SVLRLAPSALSPVSPFKPPARNCPLPQEKKFGAPPPPP 650
+VL +A PV PPA P P E GAPPPPP
Sbjct: 15 AVLIACVAAQGPVGA--PPAPGTPPPAEPAPGAPPPPP 50
>gb|AAF63169.1|AC010657_5 (AC010657) T5E21.13 [Arabidopsis thaliana]
Length = 1776
Score = 32.5 bits (72), Expect = 5.4
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -3
Query: 745 PSALSPVSPFKPPARNCPLPQEKKFGAPPPPPTLKKYGDP 626
P+A P P P R P PQ P PPP+++ G P
Sbjct: 677 PAAFPPPRPGVPTVRPLPPPQNLALNLPRPPPSVQYPGAP 716
>ref|NP_006720.1| diaphanous 2 isoform 156
sp|O60879|DIA2_HUMAN DIAPHANOUS PROTEIN HOMOLOG 2
emb|CAA75870.1| (Y15909) DIA-156 protein [Homo sapiens]
Length = 1101
Score = 32.5 bits (72), Expect = 5.4
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
Frame = -3
Query: 733 SPVSPFKPPARNC-----PLPQEKKFGAPPPPPTLKKYGDPPGAEI 611
+P+ P PP P P FG PPPPP L PPG +
Sbjct: 575 APLPPPPPPLPGMMGIPPPPPPPLLFGGPPPPPPLGGVPPPPGISL 620
>pir||T28770 hypothetical protein W03D2.1 - Caenorhabditis elegans
gb|AAC48255.1| (AF000298) weak similarity to collagens; glycine- and proline-rich
[Caenorhabditis elegans]
Length = 539
Score = 32.5 bits (72), Expect = 5.4
Identities = 18/42 (42%), Positives = 21/42 (49%)
Frame = -3
Query: 748 APSALSPVSPFKPPARNCPLPQEKKFGAPPPPPTLKKYGDPP 623
+P SP PPA P P + G+PPPPPT G PP
Sbjct: 267 SPPLAGSGSPPPPPAAGSPPPP--RTGSPPPPPT----GSPP 302
>gb|AAD55980.1|AF159297_1 (AF159297) extensin-like protein [Zea mays]
Length = 1315
Score = 32.5 bits (72), Expect = 5.4
Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 5/42 (11%)
Frame = -3
Query: 748 APSALSPVSPFKPPARNCPLPQEKKFGAP-----PPPPTLKKYGDPP 623
+P L+PVS PP + PLP K P P PPT K PP
Sbjct: 639 SPPPLAPVSSPSPPVKLPPLPAPGKSTPPPEEEKPTPPTPVKSSPPP 685
>ref|NP_002016.1| fragile X mental retardation 2
gb|AAC82513.1| (U48436) fragile X mental retardation protein FMR2p [Homo sapiens]
gb|AAB71534.1| (AF012626) familial mental retardation protein 2 [Homo sapiens]
Length = 1311
Score = 32.5 bits (72), Expect = 5.4
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 7/58 (12%)
Frame = -3
Query: 796 IPQKHKAVLWASVLRLAPSALSPVSPFKPP-------ARNCPLPQEKKFGAPPPPPTLKK 638
IP+K + + A+ + L P +SP P KPP +R +E+K PP P +
Sbjct: 864 IPEKKQRLEEATTICLLPPCISPAPPHKPPNTRENNSSRRANRRKEEKLFPPPLSPLPE- 922
Query: 637 YGDPP 623
DPP
Sbjct: 923 --DPP 925
>sp|P51816|FMR2_HUMAN FRAGILE X MENTAL RETARDATION 2 PROTEIN (PROTEIN FMR-2) (FMR2P) (OX19
PROTEIN) (FRAGILE X E MENTAL RETARDATION SYNDROME
PROTEIN)
Length = 1301
Score = 32.5 bits (72), Expect = 5.4
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 7/58 (12%)
Frame = -3
Query: 796 IPQKHKAVLWASVLRLAPSALSPVSPFKPP-------ARNCPLPQEKKFGAPPPPPTLKK 638
IP+K + + A+ + L P +SP P KPP +R +E+K PP P +
Sbjct: 854 IPEKKQRLEEATTICLLPPCISPAPPHKPPNTRENNSSRRANRRKEEKLFPPPLSPLPE- 912
Query: 637 YGDPP 623
DPP
Sbjct: 913 --DPP 915
>sp|Q03211|EXLP_TOBAC PISTIL-SPECIFIC EXTENSIN-LIKE PROTEIN PRECURSOR (PELP)
pir||JQ1696 pistil extensin-like protein precursor (clone pMG15) - common
tobacco
emb|CAA78397.1| (Z14019) pistil extensin like protein [Nicotiana tabacum]
Length = 426
Score = 32.1 bits (71), Expect = 7.0
Identities = 18/41 (43%), Positives = 22/41 (52%), Gaps = 2/41 (4%)
Frame = -3
Query: 745 PSALSP-VSPFKPPARNC-PLPQEKKFGAPPPPPTLKKYGDPP 623
PS+ SP V P PP C P P ++ PP PP K+ PP
Sbjct: 139 PSSPSPLVKPPPPPPSPCKPSPPDQSAKQPPQPPPAKQPSPPP 181
>sp|P16537|SPC3_STRPU SPEC3 PROTEIN
pir||A43696 Spec3 protein - sea urchin (Strongylocentrotus purpuratus)
Length = 208
Score = 32.1 bits (71), Expect = 7.0
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = -3
Query: 748 APSALSPVSPFKPPARNCPLPQEKKFGAP-----PPPPTLKKYGDPP 623
AP+ P P PP + P PQ+ +G P PPP L YG PP
Sbjct: 9 APTDAPPAYP--PPPQQAPPPQQPGYGQPQLGYGQPPPQL-GYGQPP 52
>pir||A39369 homeotic protein BarH1 - fruit fly (Drosophila ananassae)
gb|AAA28381.1| (M59963) BarH1 [Drosophila ananassae]
Length = 604
Score = 32.1 bits (71), Expect = 7.0
Identities = 19/56 (33%), Positives = 25/56 (43%), Gaps = 1/56 (1%)
Frame = -3
Query: 808 GTLGIPQKHKAVLWASVLRLAPSALSPVS-PFKPPARNCPLPQEKKFGAPPPPPTLKKYG 632
GT G P ++ LR AP A+ P P +P + + PLP P PTL G
Sbjct: 525 GTGGSPSPSGGLI--KPLRAAPPAVMPPHHPSRPDSASPPLPLPLARPPSTPSPTLNP-G 581
Query: 631 DPPGAEIWLC 602
PPG + C
Sbjct: 582 SPPGRSVDSC 591
>pir||S16356 ovo protein - fruit fly (Drosophila melanogaster)
Length = 1213
Score = 32.1 bits (71), Expect = 7.0
Identities = 21/51 (41%), Positives = 23/51 (44%)
Frame = +3
Query: 615 SAPGGSPYFLSVGGGGGAPNFFSWGRGQFRAGGLKGLTGESAEGANLNTLA 767
S PGG P S GGGGG G G GG+ G S +G NL A
Sbjct: 450 SGPGGGPSANSGGGGGG-----GGGNGYINCGGVGG-PNNSLDGNNLLNFA 494
>pir||T16038 hypothetical protein F11H8.4 - Caenorhabditis elegans
gb|AAA81161.1| (U40187) similar to PIR:A41724 chicken LD (limb deformity) gene
product and to formin; also P-rich region similar to
collagen [Caenorhabditis elegans]
Length = 1259
Score = 32.1 bits (71), Expect = 7.0
Identities = 19/41 (46%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Frame = -3
Query: 745 PSALSPVS----PFKPPARNCPLPQEKKFGAPPPPPTLKKYGDPP 623
P L P+S P PP CP P PPPPP K G PP
Sbjct: 748 PGGLPPISGGPPPPPPPPGGCPPPP------PPPPPGGFKGGPPP 786
>gb|AAD11796.1| (AF104328) cell wall-plasma membrane linker protein homolog
[Arabidopsis thaliana]
Length = 306
Score = 32.1 bits (71), Expect = 7.0
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = -3
Query: 730 PVSPFKPPARNCPLPQEKKFGAPPPPPTLKKYGDPP 623
PV P KPPA P P K P PPT+K + PP
Sbjct: 43 PVKPPKPPAVKPPKPPAVK-PPTPKPPTVKPHPKPP 77
>pir||S72273 actin-depolymerizing protein N-WASP, brain - bovine
dbj|BAA11082.1| (D67066) N-WASP [Bos taurus]
Length = 505
Score = 32.1 bits (71), Expect = 7.0
Identities = 26/83 (31%), Positives = 33/83 (39%), Gaps = 1/83 (1%)
Frame = -3
Query: 745 PSALSPVSPFKPP-ARNCPLPQEKKFGAPPPPPTLKKYGDPPGAEIWLCFKQVGISSIRI 569
PS P P PP + P P + GAPPPPP+ PP + G+ +
Sbjct: 282 PSRGGPPPPPPPPHSSGPPPPPARGRGAPPPPPSRAPTAAPPPPPP----SRPGVGAPPP 337
Query: 568 *HTATYPRTLDENPSSSTFVPRDP 497
YP L PSS+ P P
Sbjct: 338 PPNRMYPPPLPALPSSAPSGPPPP 361
>gb|AAF46552.1| (AE003449) CG2971 gene product [Drosophila melanogaster]
Length = 1260
Score = 32.1 bits (71), Expect = 7.0
Identities = 17/40 (42%), Positives = 20/40 (49%)
Frame = -3
Query: 769 WASVLRLAPSALSPVSPFKPPARNCPLPQEKKFGAPPPPP 650
W + +AP+A P P PP PLP APPPPP
Sbjct: 5 WQTAAAVAPTAALPPQPSVPP----PLPD-----APPPPP 35
>gb|AAF68526.1|AF252743_1 (AF252743) ovo protein [Drosophila simulans]
Length = 453
Score = 32.1 bits (71), Expect = 7.0
Identities = 21/51 (41%), Positives = 23/51 (44%)
Frame = +3
Query: 615 SAPGGSPYFLSVGGGGGAPNFFSWGRGQFRAGGLKGLTGESAEGANLNTLA 767
S PGG P S GGGGG G G GG+ G S +G NL A
Sbjct: 221 SGPGGGPSANSGGGGGG-----GGGNGYINCGGVGG-PNNSLDGNNLLNFA 265
>dbj|BAA92595.1| (AB037778) KIAA1357 protein [Homo sapiens]
Length = 836
Score = 32.1 bits (71), Expect = 7.0
Identities = 18/41 (43%), Positives = 21/41 (50%), Gaps = 4/41 (9%)
Frame = -3
Query: 745 PSALSPVSPFKPPARNC----PLPQEKKFGAPPPPPTLKKYGDPP 623
P+ SP P PP +C PLP F PPPP L + PP
Sbjct: 173 PADRSPFLPPPPPVTDCSQGSPLPHSPVF-PPPPPEALIPFCSPP 216
>gb|AAF47428.1| (AE003469) CG13903 gene product [Drosophila melanogaster]
Length = 1003
Score = 32.1 bits (71), Expect = 7.0
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 9/38 (23%)
Frame = -3
Query: 760 VLRLAP------SALSPVSPFKPPARNCPLP---QEKKFGAPPPPPT 647
VL+LAP +A +PV+ P +N PLP Q+ + AP P PT
Sbjct: 480 VLQLAPPQPAQVAAAAPVAQLSSPPQNLPLPTAHQQSQLPAPVPAPT 526
>pir||D41132 collagen-related protein 4 - Hydra magnipapillata (fragment)
pir||S21932 mini-collagen - Hydra sp
emb|CAA43382.1| (X61048) mini-collagen [Hydra sp.]
Length = 172
Score = 32.1 bits (71), Expect = 7.0
Identities = 19/51 (37%), Positives = 21/51 (40%), Gaps = 6/51 (11%)
Frame = -3
Query: 745 PSALSPVSPFKPPA------RNCPLPQEKKFGAPPPPPTLKKYGDPPGAEIWLCFKQ 593
P +P +P PP R CP P G PPPPP PP C Q
Sbjct: 111 PGIPAPPAPPAPPLCLHHCIRICPAPSPACVGLPPPPPPPPPPPPPPSPMSCFCQPQ 167
>sp|P51521|OVO_DROME OVO PROTEIN (SHAVEN BABY PROTEIN)
pir||A56038 DNA-binding protein ovo - fruit fly (Drosophila melanogaster)
gb|AAB60216.1| (U11383) Ovo-1028aa [Drosophila melanogaster]
Length = 1028
Score = 32.1 bits (71), Expect = 7.0
Identities = 21/51 (41%), Positives = 23/51 (44%)
Frame = +3
Query: 615 SAPGGSPYFLSVGGGGGAPNFFSWGRGQFRAGGLKGLTGESAEGANLNTLA 767
S PGG P S GGGGG G G GG+ G S +G NL A
Sbjct: 87 SGPGGGPSANSGGGGGG-----GGGNGYINCGGVGG-PNNSLDGNNLLNFA 131
>emb|CAB59301.1| (Y18252) protein kinase C [Botryotinia fuckeliana]
Length = 1170
Score = 32.1 bits (71), Expect = 7.0
Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 8/40 (20%)
Frame = -3
Query: 745 PSALSPVSPFKPPARNC--------PLPQEKKFGAPPPPPTLKKYGDP 626
PSA P P PA P+PQ + PPPPPT Y P
Sbjct: 752 PSAQMPTQPTYNPALYANVDSGYSQPVPQLQNSPLPPPPPTATMYAPP 799
>gb|AAF46002.1| (AE003433) ovo gene product [alt 1] [Drosophila melanogaster]
Length = 1028
Score = 32.1 bits (71), Expect = 7.0
Identities = 21/51 (41%), Positives = 23/51 (44%)
Frame = +3
Query: 615 SAPGGSPYFLSVGGGGGAPNFFSWGRGQFRAGGLKGLTGESAEGANLNTLA 767
S PGG P S GGGGG G G GG+ G S +G NL A
Sbjct: 87 SGPGGGPSANSGGGGGG-----GGGNGYINCGGVGG-PNNSLDGNNLLNFA 131
>emb|CAB36921.1| (X59772) ovo protein [Drosophila melanogaster]
Length = 850
Score = 32.1 bits (71), Expect = 7.0
Identities = 21/51 (41%), Positives = 23/51 (44%)
Frame = +3
Query: 615 SAPGGSPYFLSVGGGGGAPNFFSWGRGQFRAGGLKGLTGESAEGANLNTLA 767
S PGG P S GGGGG G G GG+ G S +G NL A
Sbjct: 87 SGPGGGPSANSGGGGGG-----GGGNGYINCGGVGG-PNNSLDGNNLLNFA 131
>gb|AAC17501.1| (AF062008) unknown [Caenorhabditis elegans]
Length = 1018
Score = 32.1 bits (71), Expect = 7.0
Identities = 19/41 (46%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Frame = -3
Query: 745 PSALSPVS----PFKPPARNCPLPQEKKFGAPPPPPTLKKYGDPP 623
P L P+S P PP CP P PPPPP K G PP
Sbjct: 331 PGGLPPISGGPPPPPPPPGGCPPPP------PPPPPGGFKGGPPP 369
>gb|AAF46003.1| (AE003433) ovo gene product [alt 2] [Drosophila melanogaster]
Length = 850
Score = 32.1 bits (71), Expect = 7.0
Identities = 21/51 (41%), Positives = 23/51 (44%)
Frame = +3
Query: 615 SAPGGSPYFLSVGGGGGAPNFFSWGRGQFRAGGLKGLTGESAEGANLNTLA 767
S PGG P S GGGGG G G GG+ G S +G NL A
Sbjct: 87 SGPGGGPSANSGGGGGG-----GGGNGYINCGGVGG-PNNSLDGNNLLNFA 131
>gb|AAA53435.1| (L12695) engrailed protein [Gallus gallus]
Length = 229
Score = 31.7 bits (70), Expect = 9.2
Identities = 15/28 (53%), Positives = 18/28 (63%), Gaps = 3/28 (10%)
Frame = -3
Query: 733 SPVSPFKPPARN---CPLPQEKKFGAPPPPP 650
+PVSP PA CPLP ++ PPPPP
Sbjct: 35 APVSPSPAPASPAAPCPLPLPRRRPPPPPPP 65
>gb|AAF04792.1| (AF159550) structural polyprotein [Eastern equine encephalomyelitis
virus]
Length = 1242
Score = 31.7 bits (70), Expect = 9.2
Identities = 20/56 (35%), Positives = 25/56 (43%), Gaps = 5/56 (8%)
Frame = -3
Query: 763 SVLRLAPSALSPVSPFKPPARNC-----PLPQEKKFGAPPPPPTLKKYGDPPGAEIWLCF 599
SV L +P P PPA+ P P + K PPPP +K PG +C
Sbjct: 47 SVANLTLKQRAPNPPAGPPAKRKKPAPKPKPAQAKKKRPPPPAKKQKRKPKPGKRQRMCM 106
Query: 598 K 596
K
Sbjct: 107 K 107
>pir||T09964 extensin CYC15 precursor - Madagascar periwinkle
dbj|BAA13175.1| (D86853) extensin [Catharanthus roseus]
Length = 225
Score = 31.7 bits (70), Expect = 9.2
Identities = 18/41 (43%), Positives = 20/41 (47%), Gaps = 1/41 (2%)
Frame = -3
Query: 745 PSALSPVSPFKPPARNCPLPQEKKFGAPPPPPTLK-KYGDPP 623
P SP P PP P P K+ +PPPPP KY PP
Sbjct: 48 PFYKSPPPP--PPVYKSPPPPPYKYKSPPPPPHKPYKYKSPP 87
>pir||T10863 extensin precursor - kidney bean
gb|AAA87902.1| (U18791) hydroxyproline-rich glycoprotein precursor [Phaseolus
vulgaris]
Length = 580
Score = 31.7 bits (70), Expect = 9.2
Identities = 15/36 (41%), Positives = 18/36 (49%), Gaps = 2/36 (5%)
Frame = -3
Query: 730 PVSPFK--PPARNCPLPQEKKFGAPPPPPTLKKYGDPP 623
PV +K PP P P + P PPP + KY PP
Sbjct: 394 PVYKYKSPPPPYKYPSPPPPPYKYPSPPPPVYKYNSPP 431
>dbj|BAA81795.1| (AB026542) WASP-family protein [Homo sapiens]
Length = 498
Score = 31.7 bits (70), Expect = 9.2
Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
Frame = -3
Query: 745 PSALSPVSPFKPPARNCP-LP----QEKKFGAPPPPPTLKKYGDPP 623
P +P P PPA + P LP + GAPPPPP G PP
Sbjct: 359 PDFAAPPPPPPPPAADYPTLPPPPLSQPTGGAPPPPPPPPPPGPPP 404
>gb|AAF27679.1|AC018908_18 (AC018908) hypothetical protein [Arabidopsis thaliana]
Length = 907
Score = 31.7 bits (70), Expect = 9.2
Identities = 14/32 (43%), Positives = 17/32 (52%)
Frame = -3
Query: 745 PSALSPVSPFKPPARNCPLPQEKKFGAPPPPP 650
P A+ P+ F PP P + K APPPPP
Sbjct: 481 PPAVMPLKHFAPPPPTPPAFKPLKGSAPPPPP 512
>gb|AAC59867.2| (U37375) leucine zipper [Xenopus laevis]
Length = 331
Score = 31.7 bits (70), Expect = 9.2
Identities = 21/61 (34%), Positives = 30/61 (48%), Gaps = 1/61 (1%)
Frame = -3
Query: 697 CPLPQEKKFGAPPP-PPTLKKYGDPPGAEIWLCFKQVGISSIRI*HTATYPRTLDENPSS 521
CP P + APP PPTL+ Y PP EI + S + + + R+ +P+S
Sbjct: 7 CPTPVDPP--APPQVPPTLEAYAPPPHEEISPSTSLISGSGLLLARSLLGCRSTPSSPTS 64
Query: 520 ST 515
ST
Sbjct: 65 ST 66
>gb|AAF58614.1| (AE003824) CG8986 gene product [Drosophila melanogaster]
Length = 198
Score = 31.7 bits (70), Expect = 9.2
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 694 PLPQEKKFGAPPPPPTLKKYGDPPGA 617
P P ++G PPPP K+YG P A
Sbjct: 21 PEPPRSRYGPPPPPAPQKEYGPPAPA 46
>ref|NP_008938.1| pre-mRNA cleavage factor Im (68kD)
pir||S57447 HPBRII-7 protein - human
emb|CAA47752.1| (X67337) Human pre-mRNA cleavage factor I 68 kDa subunit [Homo
sapiens]
emb|CAA47751.1| (X67336) HPBRII-7 [Homo sapiens]
Length = 551
Score = 31.7 bits (70), Expect = 9.2
Identities = 19/45 (42%), Positives = 20/45 (44%)
Frame = -3
Query: 754 RLAPSALSPVSPFKPPARNCPLPQEKKFGAPPPPPTLKKYGDPPG 620
R P L P PF P PLP P PPP + YG PPG
Sbjct: 272 RPPPPVLFPGQPFGQPPLG-PLP-------PGPPPPVPGYGPPPG 308
>gb|AAA32741.1| (L34685) cell wall protein [Arabidopsis thaliana]
Length = 305
Score = 31.7 bits (70), Expect = 9.2
Identities = 16/36 (44%), Positives = 21/36 (57%), Gaps = 8/36 (22%)
Frame = -3
Query: 730 PVSPFKPPARNCPLPQE-----KKFGAPP---PPPTLKKYGDPP 623
P+ + PP + P P+E K + PP PPP K Y PP
Sbjct: 201 PIKKYPPPIKKYPPPEEYPPPIKTYPHPPVKYPPPPYKTYPHPP 244
>gb|AAF46221.1| (AE003439) CG14431 gene product [Drosophila melanogaster]
Length = 1086
Score = 31.7 bits (70), Expect = 9.2
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = -3
Query: 748 APSALSPVSPFKPPARNCPLPQEKKFGAPPPPPTLKKYGDPP 623
AP AL+P P + P P PPPPP Y PP
Sbjct: 516 APPALAPAPPARSPTPAAAAPP------PPPPPPSPSYEPPP 551
>gb|AAB61515.1| (AC000103) F21J9.13 [Arabidopsis thaliana]
Length = 1013
Score = 31.7 bits (70), Expect = 9.2
Identities = 20/51 (39%), Positives = 25/51 (48%)
Frame = +3
Query: 615 SAPGGSPYFLSVGGGGGAPNFFSWGRGQFRAGGLKGLTGESAEGANLNTLA 767
S GGS S GGG G+P G G GG G +G+S E + + LA
Sbjct: 407 SPGGGSGSPPSTGGGSGSPPSTGGGGGSPSKGGGGGKSGKSGEEKSSSNLA 457
>sp|Q05916|HME1_CHICK HOMEOBOX PROTEIN ENGRAILED-1 (GG-EN-1)
Length = 333
Score = 31.7 bits (70), Expect = 9.2
Identities = 15/28 (53%), Positives = 18/28 (63%), Gaps = 3/28 (10%)
Frame = -3
Query: 733 SPVSPFKPPARN---CPLPQEKKFGAPPPPP 650
+PVSP PA CPLP ++ PPPPP
Sbjct: 35 APVSPSPAPASPAAPCPLPLPRRRPPPPPPP 65
>pir||T13286 cappuccino gene protein - fruit fly (Drosophila melanogaster)
gb|AAC46925.1| (U34258) cappuccino [Drosophila melanogaster]
prf||2123320A cappuccino gene [Drosophila melanogaster]
Length = 1058
Score = 31.7 bits (70), Expect = 9.2
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -3
Query: 727 VSPFKPPARNCPLPQEKKFGAPPPPPTLKKYGDPPGA 617
V+P PP P P +GAPPPPP PPG+
Sbjct: 498 VAPPPPPPPPPPPPPLANYGAPPPPPP-----PPPGS 529
>ref|NP_006194.1| phosphodiesterase 4D, cAMP-specific (dunce (Drosophila)-homolog
phosphodiesterase E3)
gb|AAC00042.1| (L20969) cyclic AMP phosphodiesterase [Homo sapiens]
Length = 809
Score = 31.7 bits (70), Expect = 9.2
Identities = 17/40 (42%), Positives = 18/40 (44%)
Frame = -3
Query: 736 LSPVSPFKPPARNCPLPQEKKFGAPPPPPTLKKYGDPPGA 617
L P PP P PQ + PPPPP L PPGA
Sbjct: 51 LHPHHHLPPPPPPSPQPQPQCPLQPPPPPPLPPPPPPPGA 90
Database: nr
Posted date: Jun 11, 2000 9:46 PM
Number of letters in database: 159,777,284
Number of sequences in database: 509,459
Lambda K H
0.318 0.135 0.00
Gapped
Lambda K H
0.270 0.0470 4.94e-324
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 251170338
Number of Sequences: 509459
Number of extensions: 6090920
Number of successful extensions: 36427
Number of sequences better than 10.0: 178
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 35096
Number of HSP's gapped (non-prelim): 720
length of query: 270
length of database: 159,777,284
effective HSP length: 54
effective length of query: 215
effective length of database: 132,266,498
effective search space: 28437297070
effective search space used: 28437297070
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 70 (31.7 bits)