Score E
Sequences producing significant alignments: (bits) Value
sp|P42783|WAPP_COCIM WALL-ASSOCIATED PROTEINASE PRECURSOR >... 46 5e-04
ref|NP_012567.1| Rav1p >gi|1352875|sp|P47104|YJ03_YEAST HYP... 36 0.98
gb|AAA88735.1| (L36344) ORF; putative [Saccharomyces cerevi... 36 0.98
gb|AAC39772.1| (AF043447) hepatitis A virus cellular recept... 35 1.7
gb|AAC39771.1| (AF043446) hepatitis A virus cellular recept... 35 1.7
emb|CAA19845.2| (AL031028) /prediction=(method:""genscan"",... 34 2.2
emb|CAA52910.1| (X74955) mucin [Homo sapiens] 34 2.2
pir||T00490 nonstructural protein precursor - himetobi P vi... 34 2.2
sp|P09847|RPA2_METTW DNA-DIRECTED RNA POLYMERASE SUBUNIT A"... 34 2.9
ref|NP_033915.1| calcium channel, voltage dependent, alpha2... 34 2.9
sp|O27126|RPA2_METTH DNA-DIRECTED RNA POLYMERASE SUBUNIT A"... 34 2.9
gb|AAC39773.1| (AF043448) hepatitis A virus cellular recept... 34 2.9
gb|AAC39774.1| (AF043449) hepatitis A virus cellular recept... 34 2.9
prf||2119210A mucin [Homo sapiens] 34 2.9
ref|NP_048362.1| Asn/Thr/Ser/Val rich protein >gi|7461293|p... 33 5.0
gb|AAA59163.1| (M94131) mucin [Homo sapiens] 33 5.0
ref|NP_002448.1| mucin 2, intestinal/tracheal >gi|2506877|s... 33 5.0
gb|AAA59875.1| (M74027) mucin [Homo sapiens] 33 5.0
pir||A60095 larval glue protein Lgp-1 precursor - fruit fly... 33 5.0
pir||A43932 mucin 2 precursor, intestinal - human (fragments) 33 5.0
gb|AAF55492.1| (AE003720) sr gene product [Drosophila melan... 33 6.5
gb|AAF58068.1| (AE003808) CG18250 gene product [Drosophila ... 33 6.5
dbj|BAA25638.1| (AB012855) chitinase [Oryza sativa] 33 6.5
ref|NP_012685.1| Yjr151cp >gi|1352944|sp|P47179|YJ9P_YEAST ... 33 6.5
dbj|BAA33762.1| (AB018248) chitinase [Oryza sativa] 33 6.5
pir||T22696 hypothetical protein F55B11.3 - Caenorhabditis ... 32 8.5
ref|NP_014590.1| S-adenosylmethionine decarboxylase; Spe2p ... 32 8.5
ref|NP_060868.1| calcium channel alpha2-delta3 subunit >gi|... 32 8.5
pir||A45761 Ca2+-transporting ATPase (EC 3.6.1.38) - Plasmo... 32 8.5
gb|AAF16955.1|AF197623_1 (AF197623) ATPase alpha subunit [C... 32 8.5
>sp|P42783|WAPP_COCIM WALL-ASSOCIATED PROTEINASE PRECURSOR
pir||A43865 chymotrypsin-like serine proteinase, 34K - Coccidioides immitis
emb|CAA44828.1| (X63114) serine proteinase [Coccidioides immitis]
gb|AAA33048.1| (M81863) proteinase [Coccidioides immitis]
gb|AAB20974.1| (S77562) 34 kda chymotrypsinlike serine proteinase [Coccidioides
immitis, Peptide, 309 aa]
Length = 309
Score = 46.5 bits (108), Expect = 5e-04
Identities = 64/236 (27%), Positives = 102/236 (43%), Gaps = 16/236 (6%)
Frame = -3
Query: 1028 APISVLLNSNVTDDKGLQVFYVTSQDNLGVALRNSAAKGVDSQDFYEAAADAHV--GLIP 855
+P++VL N + L +F++TS+ L + R ++S Y A D V G+I
Sbjct: 3 SPVTVLENPIPKSGQHL-LFFLTSKQQLALEQRP-----IESSLGYSAYVDHGVSQGVIV 56
Query: 854 VKSEIGSAVMNGLNLVVAITKHKLKDECEKPTLNDVSIVSPVYQVL---DTTGITNTTAA 684
S I +A+ + L V ITK + +S++SP Y ++ I T A
Sbjct: 57 NPSSIAAAMRSSLITVYGITKPGTDKQY-------ISVISPTYNLIANRQNQPIETTQKA 109
Query: 683 IVSNEDNS-NAWVYYLK-GSDPKEIQICEYELTTGNIGPISNLNIDP--DCSLGAFYDTN 516
+ + DN N WVYYL + I E + P P + +L A Y
Sbjct: 110 LAACSDNDRNNWVYYLNLPQGTAQYAIYELNIQDSTSAPTVYSGPTPSGNSNLAAVYFPP 169
Query: 515 GNGRSIIYQDKDQGHIKEYQIESGQTIDIGDSAGAKLNTS-LAVAYFEGY------AYLY 357
R II+ + D H + + Q+ + G+ ++ S LA +LY
Sbjct: 170 NKDRFIIFSNTDTRHYLYWVNSTLQSANRIAGTGSVMSASPLAATTITNVQTRSMTIFLY 229
Query: 356 YTDQFMNLYRII 321
Y D L RI+
Sbjct: 230 YMDVNTLLNRIV 241
>ref|NP_012567.1| Rav1p
sp|P47104|YJ03_YEAST HYPOTHETICAL 154.9 KD PROTEIN IN CPR7-PET191 INTERGENIC REGION
pir||S57052 hypothetical protein YJR033c - yeast (Saccharomyces cerevisiae)
emb|CAA89560.1| (Z49533) ORF YJR033c [Saccharomyces cerevisiae]
Length = 1357
Score = 35.6 bits (80), Expect = 0.98
Identities = 37/131 (28%), Positives = 55/131 (41%), Gaps = 10/131 (7%)
Frame = -3
Query: 749 VSIVSPVYQ----------VLDTTGITNTTAAIVSNEDNSNAWVYYLKGSDPKEIQICEY 600
+SI+ PV+Q ++ G+T T AIV+ D W I+ C
Sbjct: 547 ISIIDPVHQTFVSNRPLISLITKKGLTRTYKAIVNYNDRHVQW-----------IKAC-- 593
Query: 599 ELTTGNIGPISNLNIDPDCSLGAFYDTNGNGRSIIYQDKDQGHIKEYQIESGQTIDIGDS 420
E+ TG I N S G N G+ + D ++G + EY+ I+ D
Sbjct: 594 EINTG----IMNCTCIRGSSTGKLCIVNSTGKVMSLWDLNRG-VLEYEETFHNPIEDIDW 648
Query: 419 AGAKLNTSLAVAYFEGYAYLY 357
+ S+ F GYA LY
Sbjct: 649 TSTEYGQSIVSIGFTGYALLY 669
>gb|AAA88735.1| (L36344) ORF; putative [Saccharomyces cerevisiae]
Length = 1016
Score = 35.6 bits (80), Expect = 0.98
Identities = 37/131 (28%), Positives = 55/131 (41%), Gaps = 10/131 (7%)
Frame = -3
Query: 749 VSIVSPVYQ----------VLDTTGITNTTAAIVSNEDNSNAWVYYLKGSDPKEIQICEY 600
+SI+ PV+Q ++ G+T T AIV+ D W I+ C
Sbjct: 547 ISIIDPVHQTFVSNRPLISLITKKGLTRTYKAIVNYNDRHVQW-----------IKAC-- 593
Query: 599 ELTTGNIGPISNLNIDPDCSLGAFYDTNGNGRSIIYQDKDQGHIKEYQIESGQTIDIGDS 420
E+ TG I N S G N G+ + D ++G + EY+ I+ D
Sbjct: 594 EINTG----IMNCTCIRGSSTGKLCIVNSTGKVMSLWDLNRG-VLEYEETFHNPIEDIDW 648
Query: 419 AGAKLNTSLAVAYFEGYAYLY 357
+ S+ F GYA LY
Sbjct: 649 TSTEYGQSIVSIGFTGYALLY 669
>gb|AAC39772.1| (AF043447) hepatitis A virus cellular receptor 1 long form
[Cercopithecus aethiops]
Length = 474
Score = 34.8 bits (78), Expect = 1.7
Identities = 34/118 (28%), Positives = 50/118 (41%), Gaps = 3/118 (2%)
Frame = -1
Query: 592 PPATSVPFRTLTLILTVRSGLSMIQTATGDPXXXXXXXXXXXRNTK*SPVRPSTLATLPV 413
P T++P T+TL +T + I T T P T P +TL T+ +
Sbjct: 219 PTTTTLP-TTMTLPMT-----TTIPTTTTLPTTTTLPTTTTLPTTTTLPT--TTLPTMTL 270
Query: 412 PN*TLVSLSPTLRAT---PTFTTLISS*TCTASSRIRTLASGASTRRSPLEPTLTRPASL 242
P T + + TL T PT TTL ++ T ++ + T EP T P+S
Sbjct: 271 PTTTTLPTTMTLPMTTTLPTTTTLPTTTTLPTTTMVSTFVPPTPLPMQDHEPVATSPSSA 330
Query: 241 Q 239
Q
Sbjct: 331 Q 331
>gb|AAC39771.1| (AF043446) hepatitis A virus cellular receptor 1 short form
[Cercopithecus aethiops]
Length = 469
Score = 34.8 bits (78), Expect = 1.7
Identities = 34/118 (28%), Positives = 50/118 (41%), Gaps = 3/118 (2%)
Frame = -1
Query: 592 PPATSVPFRTLTLILTVRSGLSMIQTATGDPXXXXXXXXXXXRNTK*SPVRPSTLATLPV 413
P T++P T+TL +T + I T T P T P +TL T+ +
Sbjct: 214 PTTTTLP-TTMTLPMT-----TTIPTTTTLPTTTTLPTTTTLPTTTTLPT--TTLPTMTL 265
Query: 412 PN*TLVSLSPTLRAT---PTFTTLISS*TCTASSRIRTLASGASTRRSPLEPTLTRPASL 242
P T + + TL T PT TTL ++ T ++ + T EP T P+S
Sbjct: 266 PTTTTLPTTMTLPMTTTLPTTTTLPTTTTLPTTTMVSTFVPPTPLPMQDHEPVATSPSSA 325
Query: 241 Q 239
Q
Sbjct: 326 Q 326
>emb|CAA19845.2| (AL031028) /prediction=(method:""genscan"", version:""1.0"",
score:""477.26"")~/prediction=(method:""genefinder"",
version:""084"") [Drosophila melanogaster]
gb|AAF45644.1| (AE003421) EG:56G7.1 gene product [Drosophila melanogaster]
Length = 1795
Score = 34.4 bits (77), Expect = 2.2
Identities = 31/127 (24%), Positives = 46/127 (35%)
Frame = -1
Query: 625 LRRSKSANMS*PPATSVPFRTLTLILTVRSGLSMIQTATGDPXXXXXXXXXXXRNTK*SP 446
LR S + PP T+ P T T LTV S T T P P
Sbjct: 736 LRSSTETTSTQPPTTTTPQPTTTTTLTVTPKTSTTTTTTEKPITSSP-----------KP 784
Query: 445 VRPSTLATLPVPN*TLVSLSPTLRATPTFTTLISS*TCTASSRIRTLASGASTRRSPLEP 266
+ T PN T V+++ TPT +T T + + T ++ P+
Sbjct: 785 TTTTQKTTSTAPNTTKVAITTQKETTPTQSTS----TTIFTRKTTTNNPEPTSTEKPITS 840
Query: 265 TLTRPAS 245
T +P++
Sbjct: 841 TTPKPST 847
>emb|CAA52910.1| (X74955) mucin [Homo sapiens]
Length = 622
Score = 34.4 bits (77), Expect = 2.2
Identities = 33/121 (27%), Positives = 45/121 (36%), Gaps = 2/121 (1%)
Frame = -1
Query: 592 PPATSVPFRTLTLILTVRSGLSMIQTATGDPXXXXXXXXXXXRNTK*SPVRPSTLATLPV 413
P AT T ILT + TAT T PST AT+ V
Sbjct: 238 PTATPSSTPGTTWILT-----ELTTTATTTASTGSTATLSSTPGTTWILTEPSTTATVTV 292
Query: 412 PN*TLVSLSPT--LRATPTFTTLISS*TCTASSRIRTLASGASTRRSPLEPTLTRPASLQ 239
P + + S T TP +T ++ T T+S + + G +T L T T P +
Sbjct: 293 PTGSTATASSTQATAGTPHVSTTATTPTVTSSKATPSSSPGTATALPALRSTATTPTATS 352
Query: 238 LLA 230
A
Sbjct: 353 FTA 355
>pir||T00490 nonstructural protein precursor - himetobi P virus
dbj|BAA32553.1| (AB017037) nonstructural protein precursor [Himetobi P virus]
Length = 1777
Score = 34.4 bits (77), Expect = 2.2
Identities = 20/81 (24%), Positives = 39/81 (47%)
Frame = -3
Query: 761 TLNDVSIVSPVYQVLDTTGITNTTAAIVSNEDNSNAWVYYLKGSDPKEIQICEYELTTGN 582
++N+ + +Y L+ N ++ E++S W Y+ KE++ L GN
Sbjct: 93 SMNETHLHPDLYMNLEYVMNPNKDLDLLCGENDS--WDQYVLSRQLKEMRAIWVGLQAGN 150
Query: 581 IGPISNLNIDPDCSLGAFYDT 519
+ PI + ++PDC + +Y T
Sbjct: 151 VDPILD-TVNPDCQIALYYMT 170
>sp|P09847|RPA2_METTW DNA-DIRECTED RNA POLYMERASE SUBUNIT A" (SUBUNIT C)
pir||S02197 DNA-directed RNA polymerase (EC 2.7.7.6) chain A'' -
Methanobacterium thermoautotrophicum (strain Winter)
emb|CAA30839.1| (X08038) RNA polymerase subunit C (AA 1-449) [Methanobacterium
thermoautotrophicum]
Length = 449
Score = 34.0 bits (76), Expect = 2.9
Identities = 22/82 (26%), Positives = 43/82 (51%), Gaps = 4/82 (4%)
Frame = -3
Query: 806 VAITKHKLKDECEKPTLNDVSIVSPVYQVLDTTGITNTTAAIVSNEDNSNAWVYYLKGSD 627
V I + L+ E KPT+ ++ +++ + L +G+ N ++ ED+ WV + +GS+
Sbjct: 257 VEIDNNILRFEPPKPTIRELRLLADKVRKLQISGVKNIGKVVIRKEDDE--WVIHTEGSN 314
Query: 626 P----KEIQICEYELTTGNIGPISNL 561
KE + + TT +I I +
Sbjct: 315 LGDRFKEEGVDKVRTTTNDIHEIETV 340
>ref|NP_033915.1| calcium channel, voltage dependent, alpha2/delta subunit 3
pir||T30256 calcium channel alpha-2-delta-C chain - mouse
emb|CAA09423.1| (AJ010949) calcium channel alpha-2-delta-C subunit [Mus musculus]
Length = 1091
Score = 34.0 bits (76), Expect = 2.9
Identities = 31/102 (30%), Positives = 51/102 (49%), Gaps = 23/102 (22%)
Frame = -3
Query: 1046 FNSANMAPI-----SVLLNSNVTDDKGLQVFYVTSQDNLGVALRNSAAKGVDSQDF---- 894
F++ API S+ LN + DKG++V ++ ++ L A+ + +QDF
Sbjct: 696 FDAVVSAPIEAYWTSLALNKSENSDKGVEVAFLGTRTGLSRINLFVGAEQLTNQDFLKAG 755
Query: 893 --------------YEAAADAHVGLIPVKSEIGSAVMNGLNLVVAITKHKLKDECEKPTL 756
Y AA+ G + +N N+V A T +L DE + P +
Sbjct: 756 DKENIFNADHFPLWYRRAAEQIAGSFVYSIPFSTGTVNKSNVVTASTSIQLLDERKSPVV 815
Query: 755 NDVSI 741
V I
Sbjct: 816 AAVGI 820
>sp|O27126|RPA2_METTH DNA-DIRECTED RNA POLYMERASE SUBUNIT A"
pir||H69006 DNA-directed RNA polymerase (EC 2.7.7.6) chain A'' -
Methanobacterium thermoautotrophicum (strain Delta H)
gb|AAB85543.1| (AE000876) DNA-dependent RNA polymerase, subunit A''
[Methanobacterium thermoautotrophicum]
Length = 451
Score = 34.0 bits (76), Expect = 2.9
Identities = 22/82 (26%), Positives = 43/82 (51%), Gaps = 4/82 (4%)
Frame = -3
Query: 806 VAITKHKLKDECEKPTLNDVSIVSPVYQVLDTTGITNTTAAIVSNEDNSNAWVYYLKGSD 627
V I + L+ E KPT+ ++ +++ + L +G+ N ++ ED+ WV + +GS+
Sbjct: 257 VEIDNNILRFEPPKPTIRELRLLADKVRKLQISGVKNIGKVVIRKEDDE--WVIHTEGSN 314
Query: 626 ----PKEIQICEYELTTGNIGPISNL 561
KE + + TT +I I +
Sbjct: 315 LGAVLKEEGVDKVRTTTNDIHEIETV 340
>gb|AAC39773.1| (AF043448) hepatitis A virus cellular receptor 1 short form
[Cercopithecus aethiops]
Length = 473
Score = 34.0 bits (76), Expect = 2.9
Identities = 33/118 (27%), Positives = 50/118 (41%), Gaps = 3/118 (2%)
Frame = -1
Query: 592 PPATSVPFRTLTLILTVRSGLSMIQTATGDPXXXXXXXXXXXRNTK*SPVRPSTLATLPV 413
P T++P T+TL +T + + T T P T P +TL T+ +
Sbjct: 218 PTTTTLP-TTMTLPMT-----TTLPTTTTLPTTTTLPTTTTLPTTTTLPT--TTLPTMTL 269
Query: 412 PN*TLVSLSPTLRAT---PTFTTLISS*TCTASSRIRTLASGASTRRSPLEPTLTRPASL 242
P T + + TL T PT TTL ++ T ++ + T EP T P+S
Sbjct: 270 PTTTTLPTTMTLPMTTTLPTTTTLPTTTTLPTTTMVSTFVPPTPLPMQDHEPVATSPSSA 329
Query: 241 Q 239
Q
Sbjct: 330 Q 330
>gb|AAC39774.1| (AF043449) hepatitis A virus cellular receptor 1 long form
[Cercopithecus aethiops]
Length = 478
Score = 34.0 bits (76), Expect = 2.9
Identities = 33/118 (27%), Positives = 50/118 (41%), Gaps = 3/118 (2%)
Frame = -1
Query: 592 PPATSVPFRTLTLILTVRSGLSMIQTATGDPXXXXXXXXXXXRNTK*SPVRPSTLATLPV 413
P T++P T+TL +T + + T T P T P +TL T+ +
Sbjct: 223 PTTTTLP-TTMTLPMT-----TTLPTTTTLPTTTTLPTTTTLPTTTTLPT--TTLPTMTL 274
Query: 412 PN*TLVSLSPTLRAT---PTFTTLISS*TCTASSRIRTLASGASTRRSPLEPTLTRPASL 242
P T + + TL T PT TTL ++ T ++ + T EP T P+S
Sbjct: 275 PTTTTLPTTMTLPMTTTLPTTTTLPTTTTLPTTTMVSTFVPPTPLPMQDHEPVATSPSSA 334
Query: 241 Q 239
Q
Sbjct: 335 Q 335
>prf||2119210A mucin [Homo sapiens]
Length = 164
Score = 34.0 bits (76), Expect = 2.9
Identities = 21/68 (30%), Positives = 33/68 (47%)
Frame = -1
Query: 451 SPVRPSTLATLPVPN*TLVSLSPTLRATPTFTTLISS*TCTASSRIRTLASGASTRRSPL 272
+P P+T TL T + + + +TPT +T + T T S+ ++ SG T SP+
Sbjct: 71 TPSAPTTSTTLAPTTSTTSAPTTSTTSTPTSSTTSTPQTSTTSASTTSITSGPGTTPSPV 130
Query: 271 EPTLTRPA 248
T T A
Sbjct: 131 PTTSTTSA 138
>ref|NP_048362.1| Asn/Thr/Ser/Val rich protein
pir||T17504 hypothetical protein A14R - Chlorella virus PBCV-1
gb|AAC96382.1| (U42580) Asn/Thr/Ser/Val rich protein [Paramecium bursaria Chlorella
virus 1]
Length = 1369
Score = 33.2 bits (74), Expect = 5.0
Identities = 45/218 (20%), Positives = 81/218 (36%), Gaps = 7/218 (3%)
Frame = -3
Query: 1043 NSANMAPISVLLNSNVTDD-----KGLQVFYVTSQDNLGVALRNSAAKGVDSQDFYEAAA 879
N+AN+ + N NVT + + FY TS + +G N+A + FY+ +
Sbjct: 772 NTANIVNYTPTSNINVTGNLTLGNANIVNFYATSANIVGNITANNAVITFLTTPFYKGSG 831
Query: 878 DAHVGLIPVKSEIGSAVMNGLNLVVAITKHKLKDECEKPTLNDVSIVSPVYQVLDTTGIT 699
G + S N L+ V+ L++ V+ V+ + G
Sbjct: 832 TVSAGFTSIIS------ANALSNVIVFGNLSANIVVSNTLLSNSINVATVFSNVVNIGQV 885
Query: 698 NTTAAIVSNEDNSNAWVYYLKGS--DPKEIQICEYELTTGNIGPISNLNIDPDCSLGAFY 525
+T + N N N + G+ +++ +TT N I+N+ + ++G
Sbjct: 886 TSTGTTLVNSINFNISNVDVSGNVLVTRDVYTTNISVTTAN---IANVTFFSNVAIGNLI 942
Query: 524 DTNGNGRSIIYQDKDQGHIKEYQIESGQTIDIGDSAGAKLNTSLA 390
T + + D + Y TID + L T A
Sbjct: 943 STRNLTAANLISSSDLFNSGPYTSSQNVTIDTLNFTAGNLGTVAA 987
>gb|AAA59163.1| (M94131) mucin [Homo sapiens]
Length = 1270
Score = 33.2 bits (74), Expect = 5.0
Identities = 33/114 (28%), Positives = 47/114 (40%), Gaps = 7/114 (6%)
Frame = -1
Query: 592 PPATSVPFRTLTLILT---VRSGLSMIQTATGDPXXXXXXXXXXXRNTK*SPVR----PS 434
PP T+ P +T T + S I T P T SP+ PS
Sbjct: 1034 PPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTT--TPSSPITTTTTPS 1091
Query: 433 TLATLPVPN*TLVSLSPTLRATPTFTTLISS*TCTASSRIRTLASGASTRRSPLEPTLTR 254
+ T P T+ + SPT +P TT+ + T SS + T +PL P++T
Sbjct: 1092 STTTPSPPPTTMTTPSPTTTPSPPTTTMTTLPPTTTSSPLTT---------TPLPPSITP 1142
Query: 253 P 251
P
Sbjct: 1143 P 1143
>ref|NP_002448.1| mucin 2, intestinal/tracheal
sp|Q02817|MUC2_HUMAN MUCIN 2 PRECURSOR (INTESTINAL MUCIN 2)
gb|AAB95295.1| (L21998) mucin [Homo sapiens]
Length = 5179
Score = 33.2 bits (74), Expect = 5.0
Identities = 33/114 (28%), Positives = 47/114 (40%), Gaps = 7/114 (6%)
Frame = -1
Query: 592 PPATSVPFRTLTLILT---VRSGLSMIQTATGDPXXXXXXXXXXXRNTK*SPVR----PS 434
PP T+ P +T T + S I T P T SP+ PS
Sbjct: 1659 PPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTT--TPSSPITTTTTPS 1716
Query: 433 TLATLPVPN*TLVSLSPTLRATPTFTTLISS*TCTASSRIRTLASGASTRRSPLEPTLTR 254
+ T P T+ + SPT +P TT+ + T SS + T +PL P++T
Sbjct: 1717 STTTPSPPPTTMTTPSPTTTPSPPTTTMTTLPPTTTSSPLTT---------TPLPPSITP 1767
Query: 253 P 251
P
Sbjct: 1768 P 1768
>gb|AAA59875.1| (M74027) mucin [Homo sapiens]
Length = 573
Score = 33.2 bits (74), Expect = 5.0
Identities = 33/114 (28%), Positives = 47/114 (40%), Gaps = 7/114 (6%)
Frame = -1
Query: 592 PPATSVPFRTLTLILT---VRSGLSMIQTATGDPXXXXXXXXXXXRNTK*SPVR----PS 434
PP T+ P +T T + S I T P T SP+ PS
Sbjct: 317 PPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTT--TPSSPITTTTTPS 374
Query: 433 TLATLPVPN*TLVSLSPTLRATPTFTTLISS*TCTASSRIRTLASGASTRRSPLEPTLTR 254
+ T P T+ + SPT +P TT+ + T SS + T +PL P++T
Sbjct: 375 STTTPSPPPTTMTTPSPTTTPSPPTTTMTTLPPTTTSSPLTT---------TPLPPSITP 425
Query: 253 P 251
P
Sbjct: 426 P 426
>pir||A60095 larval glue protein Lgp-1 precursor - fruit fly (Drosophila
virilis)
pir||S50126 glue protein lgp-1 - fruit fly (Drosophila virilis)
emb|CAA53796.1| (X76203) major larval glue protein [Drosophila virilis]
emb|CAA82672.1| (Z29565) glue protein [Drosophila virilis]
prf||2021274B glue protein [Drosophila virilis]
Length = 232
Score = 33.2 bits (74), Expect = 5.0
Identities = 19/60 (31%), Positives = 27/60 (44%)
Frame = -1
Query: 436 STLATLPVPN*TLVSLSPTLRATPTFTTLISS*TCTASSRIRTLASGASTRRSPLEPTLT 257
+T T P P T + T TP TT + T T ++ RT + +T R+ PT T
Sbjct: 75 TTTTTTPCPTTTTTRTTTTTTTTPCPTTTTTRTTTTPTTTTRTTTTPTTTTRTTTTPTTT 134
>pir||A43932 mucin 2 precursor, intestinal - human (fragments)
Length = 3020
Score = 33.2 bits (74), Expect = 5.0
Identities = 33/114 (28%), Positives = 47/114 (40%), Gaps = 7/114 (6%)
Frame = -1
Query: 592 PPATSVPFRTLTLILT---VRSGLSMIQTATGDPXXXXXXXXXXXRNTK*SPVR----PS 434
PP T+ P +T T + S I T P T SP+ PS
Sbjct: 1659 PPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTT--TPSSPITTTTTPS 1716
Query: 433 TLATLPVPN*TLVSLSPTLRATPTFTTLISS*TCTASSRIRTLASGASTRRSPLEPTLTR 254
+ T P T+ + SPT +P TT+ + T SS + T +PL P++T
Sbjct: 1717 STTTPSPPPTTMTTPSPTTTPSPPTTTMTTLPPTTTSSPLTT---------TPLPPSITP 1767
Query: 253 P 251
P
Sbjct: 1768 P 1768
>gb|AAF55492.1| (AE003720) sr gene product [Drosophila melanogaster]
Length = 1186
Score = 32.8 bits (73), Expect = 6.5
Identities = 12/48 (25%), Positives = 21/48 (43%)
Frame = -2
Query: 834 CRHERSQSRRGHHQAQAEG*MREAHS*RCLHREPCLPGSRYHWYHQHH 691
C H Q ++ Q ++ + LH++ LP +H +H HH
Sbjct: 607 CHHSHQQQQQQQQQQHMSSPQQQYQQHQILHQQQQLPNHHHHHHHHHH 654
>gb|AAF58068.1| (AE003808) CG18250 gene product [Drosophila melanogaster]
Length = 1277
Score = 32.8 bits (73), Expect = 6.5
Identities = 34/124 (27%), Positives = 50/124 (39%), Gaps = 5/124 (4%)
Frame = -1
Query: 616 SKSANMS*PPATSVPFRTLTLILTVRSGLSMIQTATGDPXXXXXXXXXXXRNTK*SPVRP 437
S S++ S PP++SVP + T T S S + T +T +
Sbjct: 441 SSSSSASPPPSSSVPTQA-TQPTTSASSFSSSSSTTTTSTTATVSTTTTASSTATTTTTT 499
Query: 436 STLATLPVPN*TLVSLS-----PTLRATPTFTTLISS*TCTASSRIRTLASGASTRRSPL 272
+TL+ P PN L L P T T + T TA++ T A+ A+T +
Sbjct: 500 TTLSESPKPNTVLNELELSTQLPIDDFEGTATATQPTGTATATAIASTAAAAAATAAAAT 559
Query: 271 EPTLTRPAS 245
T AS
Sbjct: 560 ATATTANAS 568
>dbj|BAA25638.1| (AB012855) chitinase [Oryza sativa]
Length = 328
Score = 32.8 bits (73), Expect = 6.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -2
Query: 939 CPQKLCCQRR*LAGLLRGSCRCACRSHSRQVRD 841
CP +LCC R GL C+ C+S R RD
Sbjct: 32 CPNRLCCSRWGWCGLTDDYCKGGCQSQCRVSRD 64
>ref|NP_012685.1| Yjr151cp
sp|P47179|YJ9P_YEAST HYPOTHETICAL 118.4 KD PROTEIN IN BAT2-DAL5 INTERGENIC REGION
PRECURSOR
pir||S57180 probable membrane protein YJR151c - yeast (Saccharomyces
cerevisiae)
emb|CAA89684.1| (Z49651) ORF YJR151c [Saccharomyces cerevisiae]
Length = 1161
Score = 32.8 bits (73), Expect = 6.5
Identities = 30/118 (25%), Positives = 45/118 (37%), Gaps = 6/118 (5%)
Frame = -1
Query: 616 SKSANMS*PPATSVPFRTLTLILTVRSGLSMIQTATGDPXXXXXXXXXXXRNTK*SPVR- 440
S ++ S P TS T T T S T + P T +P
Sbjct: 144 STTSTTSTTPTTSTTSTTPTTSTT--STTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTS 201
Query: 439 -----PSTLATLPVPN*TLVSLSPTLRATPTFTTLISS*TCTASSRIRTLASGASTRRSP 275
P+T T P + S +PT TPT +T ++ + S T +S ++T +
Sbjct: 202 TTSTTPTTSTTSTTPTTSTTSTTPTTSTTPTTSTTSTTSQTSTKSTTPTTSSTSTTPTTS 261
Query: 274 LEPT 263
PT
Sbjct: 262 TTPT 265
>dbj|BAA33762.1| (AB018248) chitinase [Oryza sativa]
Length = 340
Score = 32.8 bits (73), Expect = 6.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -2
Query: 939 CPQKLCCQRR*LAGLLRGSCRCACRSHSRQVRD 841
CP +LCC R GL C+ C+S R RD
Sbjct: 44 CPNRLCCSRWGWCGLTDDYCKGGCQSQCRVSRD 76
>pir||T22696 hypothetical protein F55B11.3 - Caenorhabditis elegans
emb|CAB05903.1| (Z83318) predicted using Genefinder~cDNA EST yk369e7.5 comes from
this gene [Caenorhabditis elegans]
Length = 851
Score = 32.5 bits (72), Expect = 8.5
Identities = 26/99 (26%), Positives = 41/99 (41%)
Frame = -1
Query: 583 TSVPFRTLTLILTVRSGLSMIQTATGDPXXXXXXXXXXXRNTK*SPVRPSTLATLPVPN* 404
T+VP T T+ T S + T T P + + P+T T+P
Sbjct: 480 TTVPTTTTTVPTTTTS---VPTTTTTVPTTTTTVPTTTTTVSTTTTTVPTTTTTVPT--- 533
Query: 403 TLVSLSPTLRATPTFTTLISS*TCTASSRIRTLASGAST 287
T ++S T PT TT + + T T S+ T+ + +T
Sbjct: 534 TTTTVSTTTTTVPTTTTTVPTTTTTVSTTTTTVPTTTTT 572
>ref|NP_014590.1| S-adenosylmethionine decarboxylase; Spe2p
sp|P21182|DCAM_YEAST S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME (ADOMETDC)
pir||DCBYDM adenosylmethionine decarboxylase (EC 4.1.1.50) precursor - yeast
(Saccharomyces cerevisiae)
gb|AAA34421.1| (M38434) S-adenosylmethionine decarboxylase [Saccharomyces
cerevisiae]
emb|CAA62536.1| (X91067) adenosylmethionine decarboxylase [Saccharomyces
cerevisiae]
emb|CAA99058.1| (Z74794) ORF YOL052c [Saccharomyces cerevisiae]
Length = 396
Score = 32.5 bits (72), Expect = 8.5
Identities = 18/83 (21%), Positives = 34/83 (40%)
Frame = -3
Query: 680 VSNEDNSNAWVYYLKGSDPKEIQICEYELTTGNIGPISNLNIDPDCSLGAFYDTNGNGRS 501
V D SN W Y+ +D + EY + +DP+C+ + +
Sbjct: 178 VGRNDKSNHWNLYVTETDRSTPKGKEYIEDDDETFEVLMTELDPECASKFVCGPEASTTA 237
Query: 500 IIYQDKDQGHIKEYQIESGQTID 432
++ ++D+GH YQ+ +D
Sbjct: 238 LVEPNEDKGHNLGYQMTKNTRLD 260
>ref|NP_060868.1| calcium channel alpha2-delta3 subunit
emb|CAB75962.1| (AJ272268) calcium channel alpha2-delta3 subunit [Homo sapiens]
Length = 997
Score = 32.5 bits (72), Expect = 8.5
Identities = 31/102 (30%), Positives = 51/102 (49%), Gaps = 23/102 (22%)
Frame = -3
Query: 1046 FNSANMAPI-----SVLLNSNVTDDKGLQVFYVTSQDNLGVALRNSAAKGVDSQDF---- 894
F++ API S+ LN + DKG++V ++ ++ L A+ + +QDF
Sbjct: 602 FDAVVSAPIEAYWTSLALNKSENSDKGVEVAFLGTRTGLSRINLFVGAEQLTNQDFLKAG 661
Query: 893 --------------YEAAADAHVGLIPVKSEIGSAVMNGLNLVVAITKHKLKDECEKPTL 756
Y AA+ G + +N N+V A T +L DE + P +
Sbjct: 662 DKENIFNADHFPLWYRRAAEQIPGSFVYSIPFSTGPVNKSNVVTASTSIQLLDERKSPVV 721
Query: 755 NDVSI 741
V I
Sbjct: 722 AAVGI 726
>pir||A45761 Ca2+-transporting ATPase (EC 3.6.1.38) - Plasmodium yoelii
emb|CAA38982.1| (X55197) ATPase [Plasmodium yoelii]
prf||1704358A Ca ATPase [Plasmodium berghei yoelii]
Length = 1115
Score = 32.5 bits (72), Expect = 8.5
Identities = 19/88 (21%), Positives = 45/88 (50%), Gaps = 5/88 (5%)
Frame = -3
Query: 827 MNGLNLVVAITKHKLKDECEKPTLNDVSIVS-----PVYQVLDTTGITNTTAAIVSNEDN 663
+NG + K+K+ D+ +PT + + + ++++ T + +V N +
Sbjct: 547 LNGGHDSSTYKKNKISDKKSEPTFPSKCVSAWRNECTIMRIIEFTRERKLMSVVVEN--S 604
Query: 662 SNAWVYYLKGSDPKEIQICEYELTTGNIGPISN 564
N ++ Y KG+ I C+Y ++ +I P+++
Sbjct: 605 KNEYILYCKGAPENIINRCKYYMSKNDIRPLTD 637
>gb|AAF16955.1|AF197623_1 (AF197623) ATPase alpha subunit [Cycas revoluta]
Length = 403
Score = 32.5 bits (72), Expect = 8.5
Identities = 22/77 (28%), Positives = 31/77 (39%)
Frame = -3
Query: 716 DTTGITNTTAAIVSNEDNSNAWVYYLKGSDPKEIQICEYELTTGNIGPISNLNIDPDCSL 537
D+ + AI + V L G+D E I T + P+ L P C+
Sbjct: 157 DSEKLYRVYVAIGQKRSTAAQLVQILSGADASEYPII-VAATASDPAPLQFLAPYPGCAA 215
Query: 536 GAFYDTNGNGRSIIYQD 486
G ++ NG SIIY D
Sbjct: 216 GEYFRDNGMHASIIYDD 232
Database: nr
Posted date: Sep 29, 2000 9:53 PM
Number of letters in database: 177,575,912
Number of sequences in database: 565,281
Lambda K H
0.318 0.135 0.00
Gapped
Lambda K H
0.270 0.0470 4.94e-324
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 324884294
Number of Sequences: 565281
Number of extensions: 6891651
Number of successful extensions: 21238
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 21180
Number of HSP's gapped (non-prelim): 75
length of query: 362
length of database: 177,575,912
effective HSP length: 54
effective length of query: 307
effective length of database: 147,050,738
effective search space: 45144576566
effective search space used: 45144576566
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 72 (32.5 bits)