Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA21666.1| (D28880) surface antigen [Hepatitis B virus] 36 1.2
dbj|BAA32926.1| (AB014385) envelope protein [Hepatitis B vi... 35 1.5
dbj|BAA32933.1| (AB014387) envelope protein [Hepatitis B vi... 35 1.5
sp|P31869|VMSA_HPBVS MAJOR SURFACE ANTIGEN >gi|73569|pir||S... 35 2.0
emb|CAC02731.1| (AL390114) extremely cysteine/valine rich p... 34 2.6
dbj|BAA85370.1| (AB033557) preS1/preS2/S envelope [Hepatiti... 34 2.6
dbj|BAA85350.1| (AB033551) preS1/preS2/S envelope [Hepatiti... 34 2.6
dbj|BAA32853.1| (AB014365) envelope protein [Hepatitis B vi... 34 2.6
dbj|BAA04928.1| (D23682) HBV surface proteins [Hepatitis B ... 34 2.6
sp|P12934|VMSA_HPBV4 MAJOR SURFACE ANTIGEN PRECURSOR 34 2.6
dbj|BAA32964.1| (AB014396) envelope protein [Hepatitis B vi... 34 2.6
dbj|BAA04936.1| (D23684) HBV surface proteins [Hepatitis B ... 34 2.6
dbj|BAA32973.1| (AB014399) envelope protein [Hepatitis B vi... 34 2.6
dbj|BAA32899.1| (AB014377) envelope protein [Hepatitis B vi... 34 2.6
dbj|BAA32954.1| (AB014393) envelope protein [Hepatitis B vi... 34 2.6
gb|AAF82724.1|AF233236_3 (AF233236) large surface antigen [... 34 2.6
dbj|BAA85383.1| (AB033550) preS1/preS2/S envelope protein [... 34 2.6
prf||1011236B antigen HBsAg,surface [Hepatitis B virus] 34 2.6
dbj|BAA85358.1| (AB033553) preS1/preS2/S envelope [Hepatiti... 34 2.6
sp|P03140|VMSA_HPBVR MAJOR SURFACE ANTIGEN PRECURSOR >gi|73... 34 2.6
dbj|BAA23450.1| (D50519) large surface protein [Hepatitis B... 34 2.6
dbj|BAA85354.1| (AB033552) preS1/preS2/S envelope [Hepatiti... 34 2.6
dbj|BAA23456.1| (D50520) large surface protein [Hepatitis B... 34 2.6
dbj|BAA32895.1| (AB014376) envelope protein [Hepatitis B vi... 34 2.6
gb|AAC06358.1| (AF052576) large surface antigen [Hepatitis ... 34 2.6
dbj|BAA32958.1| (AB014394) envelope protein [Hepatitis B vi... 34 2.6
dbj|BAA32887.1| (AB014374) envelope protein [Hepatitis B vi... 34 2.6
dbj|BAA32914.1| (AB014381) envelope protein [Hepatitis B vi... 34 2.6
dbj|BAA32841.1| (AB014362) envelope protein [Hepatitis B vi... 34 2.6
dbj|BAA04932.1| (D23683) HBV surface proteins [Hepatitis B ... 34 2.6
dbj|BAA32951.1| (AB014392) envelope protein [Hepatitis B vi... 34 2.6
dbj|BAA23436.1| (D50517) large surface protein [Hepatitis B... 34 2.6
pir||S35528 surface antigen - hepatitis B virus (subtype ad... 34 2.6
gb|AAB36407.2| (S81946) envelope [Hepatitis B virus] 34 2.6
dbj|BAA32970.1| (AB014398) envelope protein [Hepatitis B vi... 34 2.6
dbj|BAA23437.1| (D50517) middle surface protein [Hepatitis ... 34 2.6
dbj|BAA00944.1| (D10055) envelope proteins [Hepatitis B virus] 34 2.6
gb|AAC06359.1| (AF052576) middle surface antigen [Hepatitis... 34 2.6
dbj|BAA23451.1| (D50519) middle surface protein [Hepatitis ... 34 2.6
dbj|BAA23457.1| (D50520) middle surface protein [Hepatitis ... 34 2.6
pir||JQ2110 surface antigen - hepatitis B virus (subtype ad... 34 2.6
pir||JQ2115 surface antigen - hepatitis B virus (subtype ad... 34 2.6
gb|AAA45525.1| (M17688) S gene adyr peptide subtype ayr [He... 34 2.6
emb|CAB38768.1| (Y18857) main protein [Hepatitis B virus] 34 2.6
pir||JQ2111 surface antigen - hepatitis B virus (subtype ad... 34 2.6
emb|CAA10455.1| (AJ131575) pre-S1/preS2/S protein [Hepatiti... 34 2.6
gb|AAA45522.1| (M17687) S gene adr peptide subtype adr [Hep... 34 2.6
emb|CAA10431.1| (AJ131569) pre-S1/preS2/S protein [Hepatiti... 34 2.6
gb|AAC34729.1| (U19777) surface antigen HBsAg [Hepatitis B ... 34 2.6
gb|AAB00532.1| (L29017) amino acid feature: immunodominant ... 34 2.6
dbj|BAA85046.1| (AB026811) surface antigen [Hepatitis B vir... 34 2.6
sp|Q28983|ZAN_PIG ZONADHESIN PRECURSOR >gi|7522633|pir||T34... 34 2.6
pir||JQ2109 surface antigen - hepatitis B virus (subtype ad... 34 2.6
dbj|BAA23431.1| (D50517) small surface protein [Hepatitis B... 34 2.6
dbj|BAA32879.1| (AB014372) envelope protein [Hepatitis B vi... 34 2.6
gb|AAA45521.1| (M17550) S gene adwr peptide subtype adr [He... 34 2.6
pir||JQ1576 major surface antigen - hepatitis B virus (subt... 34 2.6
pir||JQ2094 surface antigen - hepatitis B virus (subtype ad... 34 2.6
emb|CAA10439.2| (AJ131571) pre-S1/preS2/S protein [Hepatiti... 34 2.6
gb|AAC06360.1| (AF052576) small surface antigen [Hepatitis ... 34 2.6
gb|AAA45497.1| (M23805) surface antigen HBsAG, clone pHBR3 ... 34 2.6
gb|AAA45501.1| (M23809) surface antigen HBsAG, clone pHBR53... 34 2.6
dbj|BAA82651.1| (AB030514) surface antigen [Hepatitis B virus] 34 2.6
gb|AAF23471.1|AF208876_1 (AF208876) small surface antigen [... 34 2.6
ref|NP_056799.1| surface antigen >gi|484612|pir||JQ2104 sur... 34 2.6
sp|P31868|VMSA_HPBVD MAJOR SURFACE ANTIGEN >gi|73568|pir||S... 34 2.6
dbj|BAA85062.1| (AB026815) surface antigen [Hepatitis B virus] 34 2.6
gb|AAA45498.1| (M23806) surface antigen HBsAG, clone pHBR14... 34 2.6
pir||JQ2102 surface antigen - hepatitis B virus (subtype ay... 34 2.6
dbj|BAA23445.1| (D50519) small surface protein [Hepatitis B... 34 2.6
pir||JQ2116 surface antigen - hepatitis B virus (subtype ad... 34 2.6
pir||JQ2108 surface antigen - hepatitis B virus (subtype ad... 34 2.6
dbj|BAA82647.1| (AB030510) surface antigen [Hepatitis B virus] 34 2.6
dbj|BAA23452.1| (D50520) small surface protein [Hepatitis B... 34 2.6
sp|P30019|VMSA_HPBVN MAJOR SURFACE ANTIGEN >gi|73567|pir||S... 34 2.6
pir||S67506 large surface antigen - hepatitis B virus (subt... 34 2.6
dbj|BAA92370.1| (AB039741) HBs antigen [Hepatitis B virus] 34 2.6
emb|CAA24234.1| (V00867) HBsAg [Hepatitis B virus] >gi|4490... 34 2.6
dbj|BAA82652.1| (AB030515) surface antigen [Hepatitis B virus] 34 2.6
pir||JQ2105 surface antigen - hepatitis B virus (subtype ad... 34 2.6
dbj|BAA09080.1| (D50489) surface antigen [Hepatitis B virus] 34 2.6
dbj|BAA04069.1| (D16665) surface antigen [Hepatitis B virus] 34 2.6
gb|AAF23485.1|AF209402_1 (AF209402) small surface antigen [... 34 2.6
pir||JQ2106 surface antigen - hepatitis B virus (subtype ad... 34 2.6
emb|CAA25743.1| (X01587) hepatitis B surface antigen (HBsAg... 34 2.6
emb|CAA10443.1| (AJ131572) pre-S1/preS2/S protein [Hepatiti... 34 2.6
emb|CAB38772.1| (Y18858) main protein [Hepatitis B virus] 34 2.6
dbj|BAA92369.1| (AB039740) HBs antigen [Hepatitis B virus] 34 2.6
pir||JQ1581 major surface antigen - hepatitis B virus (subt... 34 2.6
gb|AAA45493.1| (L08805) envelope protein [Hepatitis B virus] 34 2.6
dbj|BAA32849.1| (AB014364) envelope protein [Hepatitis B vi... 34 2.6
emb|CAA25747.1| (X01587) unidentified reading frame (s gene... 34 2.6
dbj|BAA32911.1| (AB014380) envelope protein [Hepatitis B vi... 34 3.4
dbj|BAA32923.1| (AB014384) envelope protein [Hepatitis B vi... 34 3.4
dbj|BAA32917.1| (AB014382) envelope protein [Hepatitis B vi... 34 3.4
dbj|BAA32903.1| (AB014378) envelope protein [Hepatitis B vi... 34 3.4
dbj|BAA32948.1| (AB014391) envelope protein [Hepatitis B vi... 34 3.4
dbj|BAA32860.1| (AB014367) envelope protein [Hepatitis B vi... 34 3.4
dbj|BAA32967.1| (AB014397) envelope protein [Hepatitis B vi... 34 3.4
dbj|BAA32891.1| (AB014375) envelope protein [Hepatitis B vi... 34 3.4
gb|AAF15886.1| (AF202459) truncated large envelope protein ... 34 3.4
pir||T13469 large surface antigen - hepatitis B virus (isol... 34 3.4
gb|AAF05722.2|AF191303_1 (AF191303) large envelope protein ... 34 3.4
emb|CAA53335.1| (X75656) surface antigen [Hepatitis B virus] 34 3.4
dbj|BAA00522.1| (D00630) surface antigen [Hepatitis B virus] 34 3.4
emb|CAA10045.1| (AJ012481) surface antigen [Hepatitis B virus] 34 3.4
pir||JQ2096 surface antigen - hepatitis B virus (subtype ad... 34 3.4
pir||JQ2095 surface antigen - hepatitis B virus (subtype ad... 34 3.4
ref|NP_046800.1| preS1 surface protein >gi|3150072|gb|AAC16... 34 3.4
ref|NP_046801.1| surface protein >gi|3150073|gb|AAC16906.1|... 34 3.4
gb|AAF15597.1|AF198034_1 (AF198034) truncated large envelop... 34 3.4
dbj|BAA84826.1| (AB031265) envelope protein [Hepatitis B vi... 34 4.5
gb|AAD11756.1| (AF068756) surface antigen [Hepatitis B virus] 34 4.5
dbj|BAA84820.1| (AB031262) envelope protein [Hepatitis B vi... 34 4.5
pir||T13474 large surface antigen - hepatitis B virus (isol... 34 4.5
emb|CAB91420.1| (AL355932) conserved hypothetical protein [... 34 4.5
gb|AAC58029.1| (U87748) middle S protein [Hepatitis B virus] 34 4.5
gb|AAD31856.1|AF134139_1 (AF134139) surface antigen [Hepati... 34 4.5
pir||JQ2101 surface antigen - hepatitis B virus (subtype ay... 34 4.5
pir||JQ2099 surface antigen - hepatitis B virus (subtypes a... 34 4.5
pir||JQ2100 surface antigen - hepatitis B virus (subtype ad... 34 4.5
pir||JQ1574 major surface antigen - hepatitis B virus (subt... 34 4.5
gb|AAF23462.1|AF208867_1 (AF208867) small surface antigen [... 34 4.5
pir||JQ2097 surface antigen - hepatitis B virus (subtype ay... 34 4.5
gb|AAC13352.1| (AF013631) surface antigen [Hepatitis B virus] 34 4.5
pir||JQ2098 surface antigen - hepatitis B virus (subtype ad... 34 4.5
gb|AAB88751.1| (AF036238) surface antigen [Hepatitis B virus] 34 4.5
gb|AAF23476.1|AF209393_1 (AF209393) small surface antigen [... 34 4.5
gb|AAB88749.1| (AF036236) surface antigen [Hepatitis B virus] 34 4.5
gb|AAB88750.1| (AF036237) surface antigen [Hepatitis B virus] 34 4.5
gb|AAF15903.1| (AF208019) large envelope protein [Hepatitis... 33 5.9
dbj|BAA04924.1| (D23681) HBV surface proteins [Hepatitis B ... 33 5.9
gb|AAB36406.2| (S81945) envelope [Hepatitis B virus] 33 5.9
dbj|BAA32845.1| (AB014363) envelope protein [Hepatitis B vi... 33 5.9
dbj|BAA94507.1| (AB006449) surface antigen [Hepatitis B virus] 33 5.9
gb|AAF55988.1| (AE003738) CG13855 gene product [Drosophila ... 33 5.9
gb|AAF44875.1|AE003406_80 (AE003416) hypothetical protein [... 33 5.9
ref|NP_054793.1| PRO0529 protein >gi|6560616|gb|AAF16687.1|... 33 5.9
pir||JQ2103 surface antigen - hepatitis B virus (subtype ay... 33 5.9
dbj|BAA82645.1| (AB030508) sureface antigen [Hepatitis B vi... 33 5.9
dbj|BAA82648.1| (AB030511) surface antigen [Hepatitis B virus] 33 5.9
dbj|BAA82649.1| (AB030512) surface antigen [Hepatitis B virus] 33 5.9
dbj|BAA82653.1| (AB030516) surface antigen [Hepatitis B vir... 33 5.9
dbj|BAA32868.1| (AB014369) envelope protein [Hepatitis B vi... 33 7.7
dbj|BAA32875.1| (AB014371) envelope protein [Hepatitis B vi... 33 7.7
gb|AAA45526.1| (M74499) B1 mutated molecule; ORF2 [Hepatiti... 33 7.7
gb|AAA45527.1| (M74500) B1 recombinant molecule; ORF3 [Hepa... 33 7.7
dbj|BAA32944.1| (AB014390) envelope protein [Hepatitis B vi... 33 7.7
gb|AAF34735.1|AF160501_3 (AF160501) preS1/preS2/HBsAg prote... 33 7.7
dbj|BAA32883.1| (AB014373) envelope protein [Hepatitis B vi... 33 7.7
dbj|BAA32837.1| (AB014361) envelope protein [Hepatitis B vi... 33 7.7
pir||JQ2056 surface antigen - hepatitis B virus (subtype ad... 33 7.7
dbj|BAA92371.1| (AB039742) HBs antigen [Hepatitis B virus] 33 7.7
pir||S43492 surface antigen - hepatitis B virus (subtype ad... 33 7.7
>dbj|BAA21666.1| (D28880) surface antigen [Hepatitis B virus]
Length = 400
Score = 35.6 bits (80), Expect = 1.2
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = -2
Query: 999 CPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAV 883
CPGL+ +S PTS H TSCPP+C PG R++
Sbjct: 222 CPGLNSQS-------PTSNHSPTSCPPIC----PGYRSM 249
>dbj|BAA32926.1| (AB014385) envelope protein [Hepatitis B virus]
Length = 400
Score = 35.2 bits (79), Expect = 1.5
Identities = 20/44 (45%), Positives = 23/44 (51%)
Frame = -2
Query: 999 CPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
CPGL+ +S PTS H TSCPP C PG +RWM
Sbjct: 222 CPGLNSQS-------PTSNHSPTSCPPTC----PG-----YRWM 249
>dbj|BAA32933.1| (AB014387) envelope protein [Hepatitis B virus]
Length = 385
Score = 35.2 bits (79), Expect = 1.5
Identities = 20/44 (45%), Positives = 23/44 (51%)
Frame = -2
Query: 999 CPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
CPGL+ +S PTS H TSCPP C PG +RWM
Sbjct: 207 CPGLNSQS-------PTSNHSPTSCPPTC----PG-----YRWM 234
>sp|P31869|VMSA_HPBVS MAJOR SURFACE ANTIGEN
pir||SAVLAR major surface antigen - hepatitis B virus (subtype ar)
gb|AAA45519.1| (M27766) S protein [Hepatitis B virus]
Length = 226
Score = 34.8 bits (78), Expect = 2.0
Identities = 22/53 (41%), Positives = 27/53 (50%)
Frame = -2
Query: 1026 LPGQPLQFSCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
L G P +CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 42 LGGSP---TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 75
>emb|CAC02731.1| (AL390114) extremely cysteine/valine rich protein [Leishmania
major]
Length = 361
Score = 34.4 bits (77), Expect = 2.6
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 560 LCFGSCVCIRIHFHLCLRVCLDLCHRSGRCRIIRCTFSIC 679
+C CVC+R+ +C+RVC+ +C R C +R +C
Sbjct: 128 VCVCVCVCVRVCVCVCVRVCVCVCVRV--CACVRVCVCVC 165
>dbj|BAA85370.1| (AB033557) preS1/preS2/S envelope [Hepatitis B virus]
Length = 400
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 221 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 249
>dbj|BAA85350.1| (AB033551) preS1/preS2/S envelope [Hepatitis B virus]
Length = 400
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 221 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 249
>dbj|BAA32853.1| (AB014365) envelope protein [Hepatitis B virus]
Length = 400
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 221 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 249
>dbj|BAA04928.1| (D23682) HBV surface proteins [Hepatitis B virus]
Length = 400
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 221 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 249
>sp|P12934|VMSA_HPBV4 MAJOR SURFACE ANTIGEN PRECURSOR
Length = 400
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 221 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 249
>dbj|BAA32964.1| (AB014396) envelope protein [Hepatitis B virus]
Length = 400
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 221 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 249
>dbj|BAA04936.1| (D23684) HBV surface proteins [Hepatitis B virus]
Length = 400
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 221 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 249
>dbj|BAA32973.1| (AB014399) envelope protein [Hepatitis B virus]
Length = 400
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 221 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 249
>dbj|BAA32899.1| (AB014377) envelope protein [Hepatitis B virus]
Length = 400
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 221 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 249
>dbj|BAA32954.1| (AB014393) envelope protein [Hepatitis B virus]
Length = 400
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 221 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 249
>gb|AAF82724.1|AF233236_3 (AF233236) large surface antigen [Hepatitis B virus]
Length = 400
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 221 ACPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 249
>dbj|BAA85383.1| (AB033550) preS1/preS2/S envelope protein [Hepatitis B virus]
Length = 400
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 221 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 249
>prf||1011236B antigen HBsAg,surface [Hepatitis B virus]
Length = 400
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 221 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 249
>dbj|BAA85358.1| (AB033553) preS1/preS2/S envelope [Hepatitis B virus]
Length = 400
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 221 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 249
>sp|P03140|VMSA_HPBVR MAJOR SURFACE ANTIGEN PRECURSOR
pir||SAVLA large surface antigen - hepatitis B virus (subtype adr)
Length = 400
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 221 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 249
>dbj|BAA23450.1| (D50519) large surface protein [Hepatitis B virus]
Length = 400
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 221 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 249
>dbj|BAA85354.1| (AB033552) preS1/preS2/S envelope [Hepatitis B virus]
dbj|BAA85366.1| (AB033556) preS1/preS2/S envelope [Hepatitis B virus]
Length = 400
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 221 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 249
>dbj|BAA23456.1| (D50520) large surface protein [Hepatitis B virus]
Length = 400
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 221 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 249
>dbj|BAA32895.1| (AB014376) envelope protein [Hepatitis B virus]
Length = 400
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 221 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 249
>gb|AAC06358.1| (AF052576) large surface antigen [Hepatitis B virus]
Length = 400
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 221 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 249
>dbj|BAA32958.1| (AB014394) envelope protein [Hepatitis B virus]
Length = 400
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 221 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 249
>dbj|BAA32887.1| (AB014374) envelope protein [Hepatitis B virus]
Length = 400
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 221 ACPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 249
>dbj|BAA32914.1| (AB014381) envelope protein [Hepatitis B virus]
Length = 400
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 221 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 249
>dbj|BAA32841.1| (AB014362) envelope protein [Hepatitis B virus]
Length = 400
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 221 ACPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 249
>dbj|BAA04932.1| (D23683) HBV surface proteins [Hepatitis B virus]
Length = 400
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 221 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 249
>dbj|BAA32951.1| (AB014392) envelope protein [Hepatitis B virus]
Length = 400
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 221 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 249
>dbj|BAA23436.1| (D50517) large surface protein [Hepatitis B virus]
dbj|BAA23443.1| (D50518) large surface protein [Hepatitis B virus]
Length = 400
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 221 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 249
>pir||S35528 surface antigen - hepatitis B virus (subtype adr)
dbj|BAA02359.1| (D12980) surface antigen precursor [Hepatitis B virus]
Length = 400
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 221 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 249
>gb|AAB36407.2| (S81946) envelope [Hepatitis B virus]
Length = 384
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 205 TCPGRNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 233
>dbj|BAA32970.1| (AB014398) envelope protein [Hepatitis B virus]
Length = 384
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 205 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 233
>dbj|BAA23437.1| (D50517) middle surface protein [Hepatitis B virus]
dbj|BAA23444.1| (D50518) middle surface protein [Hepatitis B virus]
Length = 281
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 102 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 130
>dbj|BAA00944.1| (D10055) envelope proteins [Hepatitis B virus]
Length = 281
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 102 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 130
>gb|AAC06359.1| (AF052576) middle surface antigen [Hepatitis B virus]
Length = 281
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 102 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 130
>dbj|BAA23451.1| (D50519) middle surface protein [Hepatitis B virus]
Length = 281
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 102 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 130
>dbj|BAA23457.1| (D50520) middle surface protein [Hepatitis B virus]
Length = 281
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 102 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 130
>pir||JQ2110 surface antigen - hepatitis B virus (subtype adr, strain pNDR260)
Length = 226
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 47 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 75
>pir||JQ2115 surface antigen - hepatitis B virus (subtype adw, strain pIWK146)
Length = 226
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 47 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 75
>gb|AAA45525.1| (M17688) S gene adyr peptide subtype ayr [Hepatitis B virus]
Length = 226
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 47 ACPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 75
>emb|CAB38768.1| (Y18857) main protein [Hepatitis B virus]
Length = 226
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 47 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 75
>pir||JQ2111 surface antigen - hepatitis B virus (subtype adr, strain Bes)
Length = 226
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 47 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 75
>emb|CAA10455.1| (AJ131575) pre-S1/preS2/S protein [Hepatitis B virus]
Length = 389
Score = 34.4 bits (77), Expect = 2.6
Identities = 22/53 (41%), Positives = 27/53 (50%)
Frame = -2
Query: 1026 LPGQPLQFSCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
L G P+ CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 205 LGGAPV---CPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 238
>gb|AAA45522.1| (M17687) S gene adr peptide subtype adr [Hepatitis B virus]
Length = 226
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 47 ACPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 75
>emb|CAA10431.1| (AJ131569) pre-S1/preS2/S protein [Hepatitis B virus]
Length = 389
Score = 34.4 bits (77), Expect = 2.6
Identities = 22/53 (41%), Positives = 27/53 (50%)
Frame = -2
Query: 1026 LPGQPLQFSCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
L G P+ CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 205 LGGAPV---CPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 238
>gb|AAC34729.1| (U19777) surface antigen HBsAg [Hepatitis B virus]
Length = 226
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 47 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 75
>gb|AAB00532.1| (L29017) amino acid feature: immunodominant 'a' antigenic
determinant, bp 415 .. 441 [Hepatitis B virus]
Length = 226
Score = 34.4 bits (77), Expect = 2.6
Identities = 22/53 (41%), Positives = 27/53 (50%)
Frame = -2
Query: 1026 LPGQPLQFSCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
L G P+ CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 42 LGGAPV---CPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 75
>dbj|BAA85046.1| (AB026811) surface antigen [Hepatitis B virus]
dbj|BAA85050.1| (AB026812) surface antigen [Hepatitis B virus]
dbj|BAA85054.1| (AB026813) surface antigen [Hepatitis B virus]
dbj|BAA85058.1| (AB026814) surface antigen [Hepatitis B virus]
Length = 226
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 47 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 75
>sp|Q28983|ZAN_PIG ZONADHESIN PRECURSOR
pir||T34022 zonadhesin - pig
gb|AAC48486.1| (U40024) zonadhesin [Sus scrofa]
Length = 2476
Score = 34.4 bits (77), Expect = 2.6
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = -2
Query: 1050 TLPITLADLPGQ-PLQFSCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHR 874
T+P + +P + P F P L P+ T P PT+ PP + P V
Sbjct: 366 TIPTEKSTVPTKKPTVFKEPTLPPEGPTVPAERPTT-------PPEGPAVPPKGPTVLTE 418
Query: 873 WMTGHTQKST 844
W T HT+KST
Sbjct: 419 WPTSHTEKST 428
>pir||JQ2109 surface antigen - hepatitis B virus (subtype adr, strain pADRRoh)
Length = 226
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 47 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 75
>dbj|BAA23431.1| (D50517) small surface protein [Hepatitis B virus]
dbj|BAA23438.1| (D50518) small surface protein [Hepatitis B virus]
Length = 226
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 47 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 75
>dbj|BAA32879.1| (AB014372) envelope protein [Hepatitis B virus]
Length = 389
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 210 ACPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 238
>gb|AAA45521.1| (M17550) S gene adwr peptide subtype adr [Hepatitis B virus]
Length = 226
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 47 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 75
>pir||JQ1576 major surface antigen - hepatitis B virus (subtype adr, strain P8)
emb|CAA53435.1| (X75792) surface antigen [Hepatitis B virus]
Length = 226
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 47 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 75
>pir||JQ2094 surface antigen - hepatitis B virus (subtype adrq-, strain Wan)
Length = 226
Score = 34.4 bits (77), Expect = 2.6
Identities = 22/53 (41%), Positives = 27/53 (50%)
Frame = -2
Query: 1026 LPGQPLQFSCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
L G P+ CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 42 LGGAPV---CPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 75
>emb|CAA10439.2| (AJ131571) pre-S1/preS2/S protein [Hepatitis B virus]
Length = 389
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 210 ACPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 238
>gb|AAC06360.1| (AF052576) small surface antigen [Hepatitis B virus]
Length = 226
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 47 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 75
>gb|AAA45497.1| (M23805) surface antigen HBsAG, clone pHBR3 [Hepatitis B virus]
Length = 226
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 47 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 75
>gb|AAA45501.1| (M23809) surface antigen HBsAG, clone pHBR53 [Hepatitis B virus]
Length = 226
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 47 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 75
>dbj|BAA82651.1| (AB030514) surface antigen [Hepatitis B virus]
Length = 226
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 47 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 75
>gb|AAF23471.1|AF208876_1 (AF208876) small surface antigen [Hepatitis B virus]
Length = 226
Score = 34.4 bits (77), Expect = 2.6
Identities = 22/53 (41%), Positives = 27/53 (50%)
Frame = -2
Query: 1026 LPGQPLQFSCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
L G P+ CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 42 LGGAPV---CPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 75
>ref|NP_056799.1| surface antigen
pir||JQ2104 surface antigen - hepatitis B virus (subtype adr, strain pHBV1-1)
gb|AAA45479.1| (M12906) surface antigen [Hepatitis B virus]
gb|AAA45523.1| (M17549) S gene adwr peptide subtype adw [Hepatitis B virus]
gb|AAF34669.1|AF222315_1 (AF222315) surface protein [Hepatitis B virus]
Length = 226
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 47 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 75
>sp|P31868|VMSA_HPBVD MAJOR SURFACE ANTIGEN
pir||SAVLAD major surface antigen - hepatitis B virus (subtype ad)
gb|AAA45518.1| (M27765) S protein [Hepatitis B virus]
Length = 226
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 47 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 75
>dbj|BAA85062.1| (AB026815) surface antigen [Hepatitis B virus]
Length = 226
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 47 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 75
>gb|AAA45498.1| (M23806) surface antigen HBsAG, clone pHBR14 [Hepatitis B virus]
Length = 226
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 47 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 75
>pir||JQ2102 surface antigen - hepatitis B virus (subtype ayr, strain 709/92)
Length = 226
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 47 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 75
>dbj|BAA23445.1| (D50519) small surface protein [Hepatitis B virus]
Length = 226
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 47 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 75
>pir||JQ2116 surface antigen - hepatitis B virus (subtype ad, strain 750/92)
Length = 226
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 47 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 75
>pir||JQ2108 surface antigen - hepatitis B virus (subtype adr, strain 747/92)
Length = 226
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 47 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 75
>dbj|BAA82647.1| (AB030510) surface antigen [Hepatitis B virus]
Length = 226
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 47 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 75
>dbj|BAA23452.1| (D50520) small surface protein [Hepatitis B virus]
Length = 226
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 47 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 75
>sp|P30019|VMSA_HPBVN MAJOR SURFACE ANTIGEN
pir||SAVLN1 major surface antigen - hepatitis B virus (subtype adr, strain NC-1)
Length = 226
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 47 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 75
>pir||S67506 large surface antigen - hepatitis B virus (subtype ayw3, isolate Hope
CH1357)
gb|AAB41952.1| (U46935) pre-HBsAg protein [Hepatitis B virus]
Length = 389
Score = 34.4 bits (77), Expect = 2.6
Identities = 22/53 (41%), Positives = 27/53 (50%)
Frame = -2
Query: 1026 LPGQPLQFSCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
L G P+ CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 205 LGGAPV---CPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 238
>dbj|BAA92370.1| (AB039741) HBs antigen [Hepatitis B virus]
Length = 226
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 47 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 75
>emb|CAA24234.1| (V00867) HBsAg [Hepatitis B virus]
emb|CAB38760.1| (Y18855) main protein [Hepatitis B virus]
emb|CAB38764.1| (Y18856) main protein [Hepatitis B virus]
dbj|BAA82644.1| (AB030507) surface antigen [Hepatitis B virus]
Length = 226
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 47 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 75
>dbj|BAA82652.1| (AB030515) surface antigen [Hepatitis B virus]
Length = 226
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 47 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 75
>pir||JQ2105 surface antigen - hepatitis B virus (subtype adw, strain pAK66)
Length = 226
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 47 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 75
>dbj|BAA09080.1| (D50489) surface antigen [Hepatitis B virus]
Length = 226
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 47 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 75
>dbj|BAA04069.1| (D16665) surface antigen [Hepatitis B virus]
Length = 226
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 47 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 75
>gb|AAF23485.1|AF209402_1 (AF209402) small surface antigen [Hepatitis B virus]
Length = 226
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 47 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 75
>pir||JQ2106 surface antigen - hepatitis B virus (subtype adr, strain OLL)
Length = 226
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 47 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 75
>emb|CAA25743.1| (X01587) hepatitis B surface antigen (HBsAg) [Hepatitis B virus]
Length = 226
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 47 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 75
>emb|CAA10443.1| (AJ131572) pre-S1/preS2/S protein [Hepatitis B virus]
Length = 389
Score = 34.4 bits (77), Expect = 2.6
Identities = 22/53 (41%), Positives = 27/53 (50%)
Frame = -2
Query: 1026 LPGQPLQFSCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
L G P+ CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 205 LGGAPV---CPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 238
>emb|CAB38772.1| (Y18858) main protein [Hepatitis B virus]
Length = 226
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 47 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 75
>dbj|BAA92369.1| (AB039740) HBs antigen [Hepatitis B virus]
Length = 226
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 47 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 75
>pir||JQ1581 major surface antigen - hepatitis B virus (subtype adrq-)
emb|CAA53359.1| (X75665) surface antigen [Hepatitis B virus]
Length = 226
Score = 34.4 bits (77), Expect = 2.6
Identities = 22/53 (41%), Positives = 27/53 (50%)
Frame = -2
Query: 1026 LPGQPLQFSCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
L G P+ CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 42 LGGAPV---CPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 75
>gb|AAA45493.1| (L08805) envelope protein [Hepatitis B virus]
Length = 225
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 46 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 74
>dbj|BAA32849.1| (AB014364) envelope protein [Hepatitis B virus]
Length = 408
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 229 ACPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 257
>emb|CAA25747.1| (X01587) unidentified reading frame (s gene) (not complementary ->
circular molecule) [Hepatitis B virus]
Length = 445
Score = 34.4 bits (77), Expect = 2.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2
Query: 1002 SCPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
+CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 266 TCPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 294
>dbj|BAA32911.1| (AB014380) envelope protein [Hepatitis B virus]
Length = 400
Score = 34.0 bits (76), Expect = 3.4
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = -2
Query: 999 CPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 222 CPGQNSQS-------PTSNHSLTSCPPIC----PG-----YRWM 249
>dbj|BAA32923.1| (AB014384) envelope protein [Hepatitis B virus]
Length = 400
Score = 34.0 bits (76), Expect = 3.4
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = -2
Query: 999 CPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 222 CPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 249
>dbj|BAA32917.1| (AB014382) envelope protein [Hepatitis B virus]
Length = 400
Score = 34.0 bits (76), Expect = 3.4
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = -2
Query: 999 CPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 222 CPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 249
>dbj|BAA32903.1| (AB014378) envelope protein [Hepatitis B virus]
Length = 400
Score = 34.0 bits (76), Expect = 3.4
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = -2
Query: 999 CPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 222 CPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 249
>dbj|BAA32948.1| (AB014391) envelope protein [Hepatitis B virus]
Length = 400
Score = 34.0 bits (76), Expect = 3.4
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = -2
Query: 999 CPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 222 CPGRNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 249
>dbj|BAA32860.1| (AB014367) envelope protein [Hepatitis B virus]
Length = 400
Score = 34.0 bits (76), Expect = 3.4
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = -2
Query: 999 CPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 222 CPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 249
>dbj|BAA32967.1| (AB014397) envelope protein [Hepatitis B virus]
Length = 390
Score = 34.0 bits (76), Expect = 3.4
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = -2
Query: 999 CPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 212 CPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 239
>dbj|BAA32891.1| (AB014375) envelope protein [Hepatitis B virus]
Length = 385
Score = 34.0 bits (76), Expect = 3.4
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = -2
Query: 999 CPGLDPKSITAPKSYPTSLHGTTSCPPVCQSWLPGSRAVRHRWM 868
CPG + +S PTS H TSCPP+C PG +RWM
Sbjct: 207 CPGQNSQS-------PTSNHSPTSCPPIC----PG-----YRWM 234
Database: nr
Posted date: Sep 29, 2000 9:53 PM
Number of letters in database: 177,575,912
Number of sequences in database: 565,281
Lambda K H
0.318 0.135 0.00
Gapped
Lambda K H
0.270 0.0470 4.94e-324
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 427470788
Number of Sequences: 565281
Number of extensions: 9918758
Number of successful extensions: 31191
Number of sequences better than 10.0: 308
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 172
Number of HSP's that attempted gapping in prelim test: 31093
Number of HSP's gapped (non-prelim): 230
length of query: 419
length of database: 177,575,912
effective HSP length: 54
effective length of query: 364
effective length of database: 147,050,738
effective search space: 53526468632
effective search space used: 53526468632
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 72 (32.5 bits)