Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA95982.1| (AB040891) KIAA1458 protein [Homo sapiens] 40 0.055
sp|P41484|PRA_MYCLE PROLINE-RICH ANTIGEN (36 KDA ANTIGEN) >... 38 0.28
pir||A41497 36K antigen pra - Mycobacterium leprae >gi|6992... 38 0.28
dbj|BAB07546.1| (AP001520) unknown conserved protein in B. ... 35 1.4
gb|AAF99684.1|AF263099_1 (AF263099) SUP35 allosuppressor mu... 35 1.9
emb|CAA68760.1| (Y00829) GST1 [Saccharomyces cerevisiae] 35 1.9
ref|NP_010457.1| translation termination factor eRF3; Sup35... 35 1.9
sp|P35085|CBPA_DICDI CALCIUM-BINDING PROTEIN >gi|416313|gb|... 35 1.9
gb|AAG01008.1|AF288210_1 (AF288210) TRK-fused protein TFG [... 35 1.9
pir||A29149 proline-rich protein - mouse >gi|200539|gb|AAA4... 35 1.9
gb|AAA35132.1| (M21129) omnipotent suppressor [Saccharomyce... 35 1.9
pir||T02437 hypothetical protein T26J13.1 - Arabidopsis tha... 35 1.9
dbj|BAA78427.1| (AB021267) polyprotein [Arabidopsis thaliana] 34 2.4
pir||B48013 proline-rich proteoglycan 2 precursor, parotid ... 34 2.4
pir||T13049 eyelid - fruit fly (Drosophila melanogaster) >g... 34 3.2
dbj|BAA24075.1| (AB000516) DSIF p160 [Homo sapiens] 34 3.2
emb|CAA73326.1| (Y12790) Supt5h protein [Homo sapiens] >gi|... 34 3.2
ref|NP_003160.1| suppressor of Ty (S.cerevisiae) 5 homolog ... 34 3.2
gb|AAF55457.1| (AE003718) osa gene product [Drosophila mela... 34 3.2
pir||T42204 chromatin structural protein homolog Supt5hp - ... 34 3.2
sp|Q05201|EYA_DROME DEVELOPMENTAL PROTEIN EYES ABSENT (PROT... 34 4.2
pir||A45174 eye cell development gene eya protein, splice f... 34 4.2
gb|AAF50643.1| (AE003561) CG10099 gene product [Drosophila ... 34 4.2
emb|CAA96575.1| (Z72494) ZP2 [Cyprinus carpio] 33 5.5
pir||B30411 synapsin Ib - rat >gi|206933|gb|AAA42148.1| (M2... 33 5.5
pir||T26931 hypothetical protein Y45F10D.4 - Caenorhabditis... 33 5.5
ref|NP_062006.1| synapsin I >gi|6686305|sp|P09951|SYN1_RAT ... 33 5.5
ref|NP_014840.1| Yor197wp >gi|2132083|pir||S67089 hypotheti... 33 7.1
pir||T29265 hypothetical protein C01G8.7 - Caenorhabditis e... 33 7.1
gb|AAF46682.1| (AE003453) CG9418 gene product [Drosophila m... 32 9.4
pir||T01397 LTR gag/pol polyprotein homolog T4I9.16 - Arabi... 32 9.4
pir||T24593 hypothetical protein T06E4.11 - Caenorhabditis ... 32 9.4
pir||A42817 proline-rich protein precursor - rat 32 9.4
dbj|BAA78424.1| (AB021264) polyprotein [Arabidopsis thaliana] 32 9.4
sp|O62732|SYN1_CANFA SYNAPSIN I >gi|2944066|gb|AAC05207.1| ... 32 9.4
>dbj|BAA95982.1| (AB040891) KIAA1458 protein [Homo sapiens]
Length = 612
Score = 39.9 bits (91), Expect = 0.055
Identities = 34/143 (23%), Positives = 59/143 (40%), Gaps = 10/143 (6%)
Frame = -1
Query: 1045 YPGPEAQYGSQQFGTQNFST------QDYYRPGYNPQHFESQYNPQNYPPVSGPQTGPND 884
YP P+ + + + T Q+ Y +N + S Y+P P S P+
Sbjct: 189 YPSPDVECAKKSLIHKLDQTMSALKRQNLYNNPFNSMSYTSPYSPNASSPYSSGFNSPSS 248
Query: 883 LPMRP--ISESYLPNNPGTMASAIKPPHQMVPANIPADL--GELRALRTNCQFNLREYIS 716
P+RP + + LP N G + S+ + P ++I ++L EL + L +
Sbjct: 249 TPVRPPIVKQLILPGNSGNLKSSDRNPPLSPQSSIDSELSASELDEDSIGSNYKLNDVTD 308
Query: 715 LQRQRRSGDASMSAYELETRLRNQTIFVLNDLR 617
+Q R + S+ T R + N R
Sbjct: 309 VQILARMQEESLRQEYAATTSRRSSGSSCNSTR 341
>sp|P41484|PRA_MYCLE PROLINE-RICH ANTIGEN (36 KDA ANTIGEN)
emb|CAA46515.1| (X65546) proline-rich antigen [Mycobacterium leprae]
Length = 249
Score = 37.5 bits (85), Expect = 0.28
Identities = 23/56 (41%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
Frame = -1
Query: 976 YRPGYNPQHFESQYNPQNYPPVSG-----PQTGPNDLPMRPISESYLPNNPGTMASAIKP 812
Y P + P S Y P PPV G P G + P P SY P P T A A P
Sbjct: 25 YEPSFAPSELGSAYPPPTAPPVGGSYPPPPPPGGSYPPPPPPGGSYPPPPPSTGAYAPPP 84
Query: 811 P 809
P
Sbjct: 85 P 85
>pir||A41497 36K antigen pra - Mycobacterium leprae
gb|AAA63035.1| (U15183) proline-rich antigen [Mycobacterium leprae]
Length = 249
Score = 37.5 bits (85), Expect = 0.28
Identities = 23/56 (41%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
Frame = -1
Query: 976 YRPGYNPQHFESQYNPQNYPPVSG-----PQTGPNDLPMRPISESYLPNNPGTMASAIKP 812
Y P + P S Y P PPV G P G + P P SY P P T A A P
Sbjct: 25 YEPSFAPSELGSAYPPPTAPPVGGSYPPPPPPGGSYPPPPPPGGSYPPPPPSTGAYAPPP 84
Query: 811 P 809
P
Sbjct: 85 P 85
>dbj|BAB07546.1| (AP001520) unknown conserved protein in B. subtilis [Bacillus
halodurans]
Length = 198
Score = 35.2 bits (79), Expect = 1.4
Identities = 22/69 (31%), Positives = 31/69 (44%)
Frame = -1
Query: 1051 KSYPGPEAQYGSQQFGTQNFSTQDYYRPGYNPQHFESQYNPQNYPPVSGPQTGPNDLPMR 872
+++PG Q Q FS Q Y + P F Q PQ P+ P T P+ L
Sbjct: 56 QAFPGMYGQQTPQGQQPGYFSAQQYQ---FQPPGFTQQQVPQQQQPMMQPMTPPDTL--- 109
Query: 871 PISESYLPN 845
P+ +SY+ N
Sbjct: 110 PLEQSYIEN 118
>gb|AAF99684.1|AF263099_1 (AF263099) SUP35 allosuppressor mutant sal3-4 [Saccharomyces
cerevisiae]
Length = 685
Score = 34.8 bits (78), Expect = 1.9
Identities = 20/51 (39%), Positives = 24/51 (46%), Gaps = 1/51 (1%)
Frame = -1
Query: 1045 YPGPEAQYGSQQFGTQNFSTQDYYRPGYNPQHFESQYNPQ-NYPPVSGPQTG 893
Y + G QQ G Q ++ Y+ YNPQ QYNPQ Y PQ G
Sbjct: 46 YQNYQGYSGYQQGGYQQYNPDAGYQQQYNPQGGYQQYNPQGGYQQQFNPQGG 97
>emb|CAA68760.1| (Y00829) GST1 [Saccharomyces cerevisiae]
Length = 685
Score = 34.8 bits (78), Expect = 1.9
Identities = 20/51 (39%), Positives = 24/51 (46%), Gaps = 1/51 (1%)
Frame = -1
Query: 1045 YPGPEAQYGSQQFGTQNFSTQDYYRPGYNPQHFESQYNPQ-NYPPVSGPQTG 893
Y + G QQ G Q ++ Y+ YNPQ QYNPQ Y PQ G
Sbjct: 46 YQNYQGYCGYQQGGYQQYNPDAGYQQQYNPQGGYQQYNPQGGYQQQFNPQGG 97
>ref|NP_010457.1| translation termination factor eRF3; Sup35p
sp|P05453|ERF2_YEAST EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR GTP-BINDING SUBUNIT (ERF2)
(TRANSLATION RELEASE FACTOR 3) (ERF3) (ERF-3) (OMNIPOTENT
SUPPRESSOR PROTEIN 2) (G1 TO S PHASE TRANSITION PROTEIN
1)
pir||EFBYS2 suppressor 2 protein - yeast (Saccharomyces cerevisiae)
emb|CAA30155.1| (X07163) SUF12 suppressor protein (AA 1 - 685) [Saccharomyces
cerevisiae]
gb|AAA35133.1| (M21129) omnipotent suppressor (alt.) [Saccharomyces cerevisiae]
emb|CAA86677.1| (Z46727) Sup2p [Saccharomyces cerevisiae]
Length = 685
Score = 34.8 bits (78), Expect = 1.9
Identities = 20/51 (39%), Positives = 24/51 (46%), Gaps = 1/51 (1%)
Frame = -1
Query: 1045 YPGPEAQYGSQQFGTQNFSTQDYYRPGYNPQHFESQYNPQ-NYPPVSGPQTG 893
Y + G QQ G Q ++ Y+ YNPQ QYNPQ Y PQ G
Sbjct: 46 YQNYQGYSGYQQGGYQQYNPDAGYQQQYNPQGGYQQYNPQGGYQQQFNPQGG 97
>sp|P35085|CBPA_DICDI CALCIUM-BINDING PROTEIN
gb|AAA03471.1| (U03413) calcium binding protein [Dictyostelium discoideum]
Length = 467
Score = 34.8 bits (78), Expect = 1.9
Identities = 26/83 (31%), Positives = 34/83 (40%), Gaps = 9/83 (10%)
Frame = -1
Query: 1042 PGPEAQYGSQQFGTQNFSTQDYYRPGYNPQHFESQYNPQN------YPPVSGPQTG---P 890
PG QY QQ + Q +PG P + QY PQ YPP Q G P
Sbjct: 131 PGAPGQYPPQQGQPGQYPPQQPGQPGQYPPQQQGQYPPQQPGQPGAYPPQQPGQPGAYPP 190
Query: 889 NDLPMRPISESYLPNNPGTMASAIKPPHQMVP 794
++++ P PG + PP P
Sbjct: 191 QQGVQNTLAKTGAPGQPG-----VPPPQGAYP 217
Score = 34.0 bits (76), Expect = 3.2
Identities = 32/82 (39%), Positives = 37/82 (45%), Gaps = 8/82 (9%)
Frame = -1
Query: 1042 PGPEAQYGSQQFGTQNFSTQDYYRPG-YNPQHFE-SQYNPQ------NYPPVSGPQTGPN 887
PG QY QQ G + Q PG Y PQ + QY PQ YPP Q P
Sbjct: 110 PGQSGQYPPQQPGQPGYPPQQPGAPGQYPPQQGQPGQYPPQQPGQPGQYPPQQQGQYPPQ 169
Query: 886 DLPMRPISESYLPNNPGTMASAIKPPHQMV 797
P +P +Y P PG + PP Q V
Sbjct: 170 Q-PGQP--GAYPPQQPGQPGA--YPPQQGV 194
>gb|AAG01008.1|AF288210_1 (AF288210) TRK-fused protein TFG [Xenopus laevis]
Length = 409
Score = 34.8 bits (78), Expect = 1.9
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = -1
Query: 1033 EAQYGSQQFGTQNFSTQDYYRPGYNPQHFESQYN-PQNY--PPVSGPQTGPNDLPMRPIS 863
+ Q QQ +Q Q Y GY PQ + +Q + P NY PPVS P PN +P +
Sbjct: 310 QQQQQQQQMVSQPPQPQQYQAGGYPPQTYTTQASQPANYNPPPVSQPGVAPN----QPGA 365
Query: 862 ESYLPNNPGTMASAIKPP 809
P + S + PP
Sbjct: 366 YQPRPAFTQSPGSTVTPP 383
>pir||A29149 proline-rich protein - mouse
gb|AAA40000.1| (M11900) 15-kDa proline-rich salivary protein [Mus musculus]
Length = 147
Score = 34.8 bits (78), Expect = 1.9
Identities = 37/124 (29%), Positives = 41/124 (32%), Gaps = 5/124 (4%)
Frame = -1
Query: 1180 EFGTRLRSLDPQPIRSPSPTXXXXXXXXXXXXXXXXXXGPERAKSYPGPEAQYGSQQFGT 1001
E G L+SLD P + P P P S GP Q G QQ
Sbjct: 18 EAGDELQSLDQTPNQKPPPPGFPPR--------------PPANGSQQGPPPQGGPQQKPP 63
Query: 1000 QNFSTQDYYRPGYNPQHFESQYNPQNYPPVSG-----PQTGPNDLPMRPISESYLPNNPG 836
Q Q PG Q N Q PP G PQ+G P P P PG
Sbjct: 64 QPGKPQGPPPPGGPQQKPPQPGNQQGPPPPGGPQQKPPQSGKPQGPPPPGGPQQRPPQPG 123
Query: 835 TMASAIKPP 809
S + P
Sbjct: 124 NQQSPPQGP 132
>gb|AAA35132.1| (M21129) omnipotent suppressor [Saccharomyces cerevisiae]
Length = 224
Score = 34.8 bits (78), Expect = 1.9
Identities = 20/51 (39%), Positives = 24/51 (46%), Gaps = 1/51 (1%)
Frame = -1
Query: 1045 YPGPEAQYGSQQFGTQNFSTQDYYRPGYNPQHFESQYNPQ-NYPPVSGPQTG 893
Y + G QQ G Q ++ Y+ YNPQ QYNPQ Y PQ G
Sbjct: 46 YQNYQGYSGYQQGGYQQYNPDAGYQQQYNPQGGYQQYNPQGGYQQQFNPQGG 97
>pir||T02437 hypothetical protein T26J13.1 - Arabidopsis thaliana
gb|AAC23727.1| (AC004625) unknown protein [Arabidopsis thaliana]
Length = 98
Score = 34.8 bits (78), Expect = 1.9
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = -1
Query: 1036 PEAQYGSQQFGTQNFSTQDYYRPGYNPQHFESQ-YNPQNYPPVSGPQTGP 890
P Y + Q + Q Y + GY PQ + Q Y Q YPP PQ P
Sbjct: 18 PPEGYPKDAYPPQGYPPQGYPQQGYPPQGYPQQGYPQQGYPPPYAPQYPP 67
>dbj|BAA78427.1| (AB021267) polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 34.4 bits (77), Expect = 2.4
Identities = 48/196 (24%), Positives = 72/196 (36%), Gaps = 12/196 (6%)
Frame = -1
Query: 1150 PQPIRSPSP--TXXXXXXXXXXXXXXXXXXGPERAKSYPGPEAQYGSQQFGTQNFSTQDY 977
P+P SPSP T A SY GP+ Q N ++
Sbjct: 797 PRPPSSPSPLCTTQVSSSNLPSSSISSPSSSEPTAPSYNGPQPTTQPHQTQNSNSNSPIL 856
Query: 976 YRPGYNPQHFESQYNPQNYPPVSGPQTGPNDLPMRPISESYL---------PNNPGTMAS 824
P NP + P S Q P LP PIS ++ PN+P + ++
Sbjct: 857 NNP-----------NPNSPSPNSPNQNSP--LPQSPISSPHIPTPSTSISEPNSPSSSST 903
Query: 823 AIKPPHQMVPANIPADLGELRALRTNCQ-FNLREYISLQRQRRSGDASMSAYELETRLRN 647
+ P ++PA + + T+ ++ I Q+ S S++A E R
Sbjct: 904 STPPLPPVLPAPPIIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYATSLAA-NSEPR--- 959
Query: 646 QTIFVLNDLRILQGEVRSIAKEAENHRW 563
I + D R Q I + NH W
Sbjct: 960 TAIQAMKDDRWRQAMGSEINAQIGNHTW 987
>pir||B48013 proline-rich proteoglycan 2 precursor, parotid - rat
gb|AAA03074.1| (L17318) proline-rich proteoglycan [Rattus norvegicus]
Length = 295
Score = 34.4 bits (77), Expect = 2.4
Identities = 22/75 (29%), Positives = 30/75 (39%), Gaps = 5/75 (6%)
Frame = -1
Query: 1006 GTQNFSTQDYYRPGYNPQHFESQYNPQNYPPVSGPQT-----GPNDLPMRPISESYLPNN 842
G + S D RP PQH + ++P + PP +GPQ P P + P
Sbjct: 72 GDDDGSGDDVNRPERPPQHGGNHHHPHHPPPAAGPQRPPQPGSPQGPPPPGGPQQRPPQG 131
Query: 841 PGTMASAIKPPHQMVPANIP 782
P +PP P P
Sbjct: 132 PPPQGGPQRPPQPGSPQGPP 151
>pir||T13049 eyelid - fruit fly (Drosophila melanogaster)
gb|AAC06254.1| (AF053091) eyelid [Drosophila melanogaster]
Length = 2715
Score = 34.0 bits (76), Expect = 3.2
Identities = 24/68 (35%), Positives = 30/68 (43%), Gaps = 3/68 (4%)
Frame = -1
Query: 1042 PGPEAQYGSQQFGTQNFSTQDYYRP---GYNPQHFESQYNPQNYPPVSGPQTGPNDLPMR 872
P P YG + N Y +P G PQ + Q +PQ PP Q GP P R
Sbjct: 142 PHPHPAYG-RYHADPNMDPYRYGQPLPGGKPPQ--QQQPHPQQQPP---QQPGPGGSPNR 195
Query: 871 PISESYLPNNP 839
P + Y+P P
Sbjct: 196 PPQQRYIPGQP 206
>dbj|BAA24075.1| (AB000516) DSIF p160 [Homo sapiens]
Length = 1087
Score = 34.0 bits (76), Expect = 3.2
Identities = 24/86 (27%), Positives = 39/86 (44%), Gaps = 14/86 (16%)
Frame = -1
Query: 1063 PERAKSYPGPEAQYGSQQFGTQ-----------NFSTQDYYRPGYNPQHFESQYNPQNYP 917
P+ PG A Y + QF + S Q Y++ +P +++ ++P +Y
Sbjct: 872 PQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYH 931
Query: 916 PVSGP---QTGPNDLPMRPISESYLPNNPGTMASAIKPPH 806
P P Q P+ P+ Y P PG + PH
Sbjct: 932 PTPSPMAYQASPSPSPV-----GYSPMTPGAPSPGGYNPH 966
>emb|CAA73326.1| (Y12790) Supt5h protein [Homo sapiens]
gb|AAD02179.1| (AF040253) transcription factor Tat-CT1 [Homo sapiens]
Length = 1087
Score = 34.0 bits (76), Expect = 3.2
Identities = 24/86 (27%), Positives = 39/86 (44%), Gaps = 14/86 (16%)
Frame = -1
Query: 1063 PERAKSYPGPEAQYGSQQFGTQ-----------NFSTQDYYRPGYNPQHFESQYNPQNYP 917
P+ PG A Y + QF + S Q Y++ +P +++ ++P +Y
Sbjct: 872 PQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYH 931
Query: 916 PVSGP---QTGPNDLPMRPISESYLPNNPGTMASAIKPPH 806
P P Q P+ P+ Y P PG + PH
Sbjct: 932 PTPSPMAYQASPSPSPV-----GYSPMTPGAPSPGGYNPH 966
>ref|NP_003160.1| suppressor of Ty (S.cerevisiae) 5 homolog
gb|AAC51102.1| (U56402) SUPT5H [Homo sapiens]
Length = 1087
Score = 34.0 bits (76), Expect = 3.2
Identities = 24/86 (27%), Positives = 39/86 (44%), Gaps = 14/86 (16%)
Frame = -1
Query: 1063 PERAKSYPGPEAQYGSQQFGTQ-----------NFSTQDYYRPGYNPQHFESQYNPQNYP 917
P+ PG A Y + QF + S Q Y++ +P +++ ++P +Y
Sbjct: 872 PQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYH 931
Query: 916 PVSGP---QTGPNDLPMRPISESYLPNNPGTMASAIKPPH 806
P P Q P+ P+ Y P PG + PH
Sbjct: 932 PTPSPMAYQASPSPSPV-----GYSPMTPGAPSPGGYNPH 966
>gb|AAF55457.1| (AE003718) osa gene product [Drosophila melanogaster]
Length = 2703
Score = 34.0 bits (76), Expect = 3.2
Identities = 24/68 (35%), Positives = 30/68 (43%), Gaps = 3/68 (4%)
Frame = -1
Query: 1042 PGPEAQYGSQQFGTQNFSTQDYYRP---GYNPQHFESQYNPQNYPPVSGPQTGPNDLPMR 872
P P YG + N Y +P G PQ + Q +PQ PP Q GP P R
Sbjct: 143 PHPHPAYG-RYHADPNMDPYRYGQPLPGGKPPQ--QQQPHPQQQPP---QQPGPGGSPNR 196
Query: 871 PISESYLPNNP 839
P + Y+P P
Sbjct: 197 PPQQRYIPGQP 207
>pir||T42204 chromatin structural protein homolog Supt5hp - mouse
gb|AAC40052.1| (U88539) chromatin structural protein homolog Supt5hp [Mus musculus]
Length = 1082
Score = 34.0 bits (76), Expect = 3.2
Identities = 24/86 (27%), Positives = 39/86 (44%), Gaps = 14/86 (16%)
Frame = -1
Query: 1063 PERAKSYPGPEAQYGSQQFGTQ-----------NFSTQDYYRPGYNPQHFESQYNPQNYP 917
P+ PG A Y + QF + S Q Y++ +P +++ ++P +Y
Sbjct: 866 PQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYH 925
Query: 916 PVSGP---QTGPNDLPMRPISESYLPNNPGTMASAIKPPH 806
P P Q P+ P+ Y P PG + PH
Sbjct: 926 PTPSPMAYQASPSPSPV-----GYSPMTPGAPSPGGYNPH 960
>sp|Q05201|EYA_DROME DEVELOPMENTAL PROTEIN EYES ABSENT (PROTEIN CLIFT)
gb|AAA28310.1| (L08502) developmental protein eya II [Drosophila melanogaster]
gb|AAF52400.1| (AE003614) cli gene product [Drosophila melanogaster]
Length = 766
Score = 33.6 bits (75), Expect = 4.2
Identities = 21/56 (37%), Positives = 26/56 (45%), Gaps = 2/56 (3%)
Frame = -1
Query: 1063 PERAKSYPGPEAQYGSQQFGTQNFSTQDYYRPGYNPQHFESQYNPQNYPP--VSGPQT 896
P A S Y S G NF QDY GY + + + Y+P NY P VS P +
Sbjct: 315 PSYAASGNNNSQLYSSPYAGYNNFGQQDY--GGYYNEQYGNYYSPANYSPYAVSSPSS 370
>pir||A45174 eye cell development gene eya protein, splice form 1 - fruit fly
(Drosophila melanogaster)
gb|AAA28723.1| (L08501) developmental protein eya I [Drosophila melanogaster]
Length = 760
Score = 33.6 bits (75), Expect = 4.2
Identities = 21/56 (37%), Positives = 26/56 (45%), Gaps = 2/56 (3%)
Frame = -1
Query: 1063 PERAKSYPGPEAQYGSQQFGTQNFSTQDYYRPGYNPQHFESQYNPQNYPP--VSGPQT 896
P A S Y S G NF QDY GY + + + Y+P NY P VS P +
Sbjct: 309 PSYAASGNNNSQLYSSPYAGYNNFGQQDY--GGYYNEQYGNYYSPANYSPYAVSSPSS 364
>gb|AAF50643.1| (AE003561) CG10099 gene product [Drosophila melanogaster]
Length = 659
Score = 33.6 bits (75), Expect = 4.2
Identities = 21/63 (33%), Positives = 29/63 (45%), Gaps = 15/63 (23%)
Frame = -1
Query: 1054 AKSYPGPEAQYGSQQFGTQNFSTQDYYRPGYNPQHFESQYN---------------PQNY 920
A SYP + S N+S+ +Y G+N Q ++S YN P
Sbjct: 44 ASSYPYAPGRVSSSSNSNTNYSSTNYNAGGFNVQRYQSPYNFQHVVTNAFSVLRHQPSEE 103
Query: 919 PPVSGPQTGPNDLPMRPI 866
P T P +RPI
Sbjct: 104 PEFDSYPTRPQQAIVRPI 121
>emb|CAA96575.1| (Z72494) ZP2 [Cyprinus carpio]
Length = 632
Score = 33.2 bits (74), Expect = 5.5
Identities = 20/63 (31%), Positives = 29/63 (45%)
Frame = -1
Query: 1045 YPGPEAQYGSQQFGTQNFSTQDYYRPGYNPQHFESQYNPQNYPPVSGPQTGPNDLPMRPI 866
+P AQ SQQF Q + Q + + PQ Q +PQ +P QT P P +P
Sbjct: 208 WPQKPAQQTSQQFQPQKPAQQTSQQ--FQPQKPAQQTSPQFWPQKPAQQTSPQFWPQKPA 265
Query: 865 SES 857
++
Sbjct: 266 QQT 268
Score = 33.2 bits (74), Expect = 5.5
Identities = 26/97 (26%), Positives = 39/97 (39%), Gaps = 3/97 (3%)
Frame = -1
Query: 1027 QYGSQQFGTQNFSTQDYYRPGYNPQHFESQYNPQNYPPVSGPQTGPNDLPMRP---ISES 857
Q QQF Q + Q + + PQ Q +PQ +P QT P P +P S+
Sbjct: 36 QQTDQQFQPQKPAQQTSQQ--FQPQKPAQQISPQFWPQKPAQQTSPQFWPQKPAQQTSQQ 93
Query: 856 YLPNNPGTMASAIKPPHQMVPANIPADLGELRALRTNCQF 737
+ P P + +P PA + +T+ QF
Sbjct: 94 FQPQKPAQTSQQFQP---QKPAQTSPQFQPQKPAQTSPQF 130
Score = 32.8 bits (73), Expect = 7.1
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 1/103 (0%)
Frame = -1
Query: 1045 YPGPEAQYGSQQFGTQN-FSTQDYYRPGYNPQHFESQYNPQNYPPVSGPQTGPNDLPMRP 869
+P AQ SQQF Q T ++P P Q+ PQ P + PQ P P +
Sbjct: 82 WPQKPAQQTSQQFQPQKPAQTSQQFQP-QKPAQTSPQFQPQK-PAQTSPQFWPQK-PAQQ 138
Query: 868 ISESYLPNNPGTMASAIKPPHQMVPANIPADLGELRALRTNCQF 737
S+ + P P S P + P + A +T+ QF
Sbjct: 139 TSQQFQPQKPAQQTSPQFWPQKPAQQTSPLFWPQKPAQQTSQQF 182
>pir||B30411 synapsin Ib - rat
gb|AAA42148.1| (M27924) synapsin Ib [Rattus norvegicus]
Length = 668
Score = 33.2 bits (74), Expect = 5.5
Identities = 33/96 (34%), Positives = 42/96 (43%), Gaps = 13/96 (13%)
Frame = -1
Query: 1057 RAKSYPGPEAQYGSQQFGTQNFSTQDYYRP---GYNPQHFESQYNPQNYPPVSGP----- 902
R + P P+ Q G Q T+ S P G +P + Q PQ P +GP
Sbjct: 545 RPPASPSPQRQAGPPQ-ATRQASISGPAPPKVSGASPGGQQRQGPPQKPPGPAGPIRQAS 603
Query: 901 QTGPNDLPMRPISESYLPNNPGTMASAIKP-----PHQMVPANIPADLG 770
Q GP P ++ P+ PG KP P Q VP I A G
Sbjct: 604 QAGPGPRTGPPTTQQPRPSGPGPAGRPTKPQLAQKPSQDVPPPIIAAAG 652
>pir||T26931 hypothetical protein Y45F10D.4 - Caenorhabditis elegans
emb|CAA16379.1| (AL021492) Y45F10D.4 [Caenorhabditis elegans]
Length = 153
Score = 33.2 bits (74), Expect = 5.5
Identities = 20/67 (29%), Positives = 31/67 (45%)
Frame = +2
Query: 515 DHGNKSGNGSSHDPSSPAMVLGFFSDAAYLTLQNSQVIQDKNRLVAKTRFKLIGRHGSIA 694
DH N S D + P++ G A + Q+ D N + + +FK G +IA
Sbjct: 33 DHYENPRNVGSLDKNDPSVGTGIVGAPACGDVMKLQIRVDDNGKIIEAKFKTFGCGSAIA 92
Query: 695 TSSLALQ 715
+SSLA +
Sbjct: 93 SSSLATE 99
>ref|NP_062006.1| synapsin I
sp|P09951|SYN1_RAT SYNAPSIN I
pir||A30411 synapsin Ia - rat
gb|AAA42145.1| (M27812) synapsin Ia [Rattus norvegicus]
Length = 704
Score = 33.2 bits (74), Expect = 5.5
Identities = 33/96 (34%), Positives = 42/96 (43%), Gaps = 13/96 (13%)
Frame = -1
Query: 1057 RAKSYPGPEAQYGSQQFGTQNFSTQDYYRP---GYNPQHFESQYNPQNYPPVSGP----- 902
R + P P+ Q G Q T+ S P G +P + Q PQ P +GP
Sbjct: 545 RPPASPSPQRQAGPPQ-ATRQASISGPAPPKVSGASPGGQQRQGPPQKPPGPAGPIRQAS 603
Query: 901 QTGPNDLPMRPISESYLPNNPGTMASAIKP-----PHQMVPANIPADLG 770
Q GP P ++ P+ PG KP P Q VP I A G
Sbjct: 604 QAGPGPRTGPPTTQQPRPSGPGPAGRPTKPQLAQKPSQDVPPPIIAAAG 652
>ref|NP_014840.1| Yor197wp
pir||S67089 hypothetical protein YOR197w - yeast (Saccharomyces cerevisiae)
emb|CAA99410.1| (Z75105) ORF YOR197w [Saccharomyces cerevisiae]
Length = 453
Score = 32.8 bits (73), Expect = 7.1
Identities = 28/80 (35%), Positives = 32/80 (40%), Gaps = 7/80 (8%)
Frame = -1
Query: 1042 PGPEAQYGSQQFGTQNFSTQDYYRPGYNPQHFESQYNPQNYP-------PVSGPQTGPND 884
P P QYG QQ+G Q N Q F QY P P PV P +
Sbjct: 46 PPPNQQYG-QQYGQQYEQQYGQQYGQQNDQQFSQQYAPPPGPPPMAYNRPVYPPPQFQQE 104
Query: 883 LPMRPISESYLPNNPGTMASAIKPPHQ 803
+S Y NNP AS + P Q
Sbjct: 105 QAKAQLSNGY--NNPNVNASNMYGPPQ 129
>pir||T29265 hypothetical protein C01G8.7 - Caenorhabditis elegans
gb|AAB37645.1| (U80439) coded for by C. elegans cDNA yk7c8.5; coded for by C.
elegans cDNA yk133b3.5; coded for by C. elegans cDNA
yk65a4.5; coded for by C. elegans cDNA yk7c8.3; coded for
by C. elegans cDNA CEESQ66F; coded for by C. elegans cDNA
yk65a4.3; coded for >
Length = 1357
Score = 32.8 bits (73), Expect = 7.1
Identities = 20/52 (38%), Positives = 23/52 (43%), Gaps = 1/52 (1%)
Frame = -1
Query: 1042 PGPEAQYGSQQFG-TQNFSTQDYYRPGYNPQHFESQYNPQNYPPVSGPQTGPN 887
P P++ G Q G Q PG PQ S Y YPPV PQ GP+
Sbjct: 12 PPPQSANGPHQNGYLQVPHGSGQPSPGATPQRSPSNYPMPGYPPVYPPQPGPS 64
>gb|AAF46682.1| (AE003453) CG9418 gene product [Drosophila melanogaster]
Length = 376
Score = 32.5 bits (72), Expect = 9.4
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -1
Query: 916 PVSGPQTGPNDLPMRPISESYLPNNPGTMASAIKPPHQMVPANIPA 779
PV P+D+P+ + + P P A+ ++PP VP PA
Sbjct: 189 PVKRQSEDPDDVPLAKVKRAQTPPPPTPPAAPVQPPPSSVPPATPA 234
>pir||T01397 LTR gag/pol polyprotein homolog T4I9.16 - Arabidopsis thaliana
gb|AAC79110.1| (AF069442) putative polyprotein of LTR transposon [Arabidopsis
thaliana]
emb|CAB77781.1| (AL161495) putative polyprotein of LTR transposon [Arabidopsis
thaliana]
Length = 1456
Score = 32.5 bits (72), Expect = 9.4
Identities = 47/196 (23%), Positives = 72/196 (35%), Gaps = 12/196 (6%)
Frame = -1
Query: 1150 PQPIRSPSP--TXXXXXXXXXXXXXXXXXXGPERAKSYPGPEAQYGSQQFGTQNFSTQDY 977
P+P SPSP T A S+ GP+ Q N ++
Sbjct: 778 PRPPSSPSPLCTTQVSSSNLPSSSISSPSSSEPTAPSHNGPQPTAQPHQTQNSNSNSPIL 837
Query: 976 YRPGYNPQHFESQYNPQNYPPVSGPQTGPNDLPMRPISESYL---------PNNPGTMAS 824
P NP + P S Q P LP PIS ++ PN+P + ++
Sbjct: 838 NNP-----------NPNSPSPNSPNQNSP--LPQSPISSPHIPTPSTSISEPNSPSSSST 884
Query: 823 AIKPPHQMVPANIPADLGELRALRTNCQ-FNLREYISLQRQRRSGDASMSAYELETRLRN 647
+ P ++PA + + T+ ++ I Q+ S S++A E R
Sbjct: 885 STPPLPPVLPAPPIIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYATSLAA-NSEPR--- 940
Query: 646 QTIFVLNDLRILQGEVRSIAKEAENHRW 563
I + D R Q I + NH W
Sbjct: 941 TAIQAMKDDRWRQAMGSEINAQIGNHTW 968
>pir||T24593 hypothetical protein T06E4.11 - Caenorhabditis elegans
emb|CAA94797.1| (Z70756) T06E4.11 [Caenorhabditis elegans]
Length = 275
Score = 32.5 bits (72), Expect = 9.4
Identities = 25/93 (26%), Positives = 35/93 (36%), Gaps = 3/93 (3%)
Frame = -1
Query: 1063 PERAKSYPGPEAQYGSQQFGT---QNFSTQDYYRPGYNPQHFESQYNPQNYPPVSGPQTG 893
P++ + YP P Q Q QN+ Q Y+PQ + Q P Y P+ G
Sbjct: 81 PQQQQPYPYPSQQQLQSQASQGYPQNYPQQQPMPSQYSPQQAQQQLPPSQY-----PEQG 135
Query: 892 PNDLPMRPISESYLPNNPGTMASAIKPPHQMVPANI 785
P PI + + P A P Q P +
Sbjct: 136 PG-----PIQQQFPQQYPQGPAQQQAPGPQQYPQGL 166
>pir||A42817 proline-rich protein precursor - rat
Length = 223
Score = 32.5 bits (72), Expect = 9.4
Identities = 39/133 (29%), Positives = 42/133 (31%)
Frame = -1
Query: 1180 EFGTRLRSLDPQPIRSPSPTXXXXXXXXXXXXXXXXXXGPERAKSYPGPEAQYGSQQFGT 1001
E G L+ LD P + P P P S GP Q G QQ
Sbjct: 18 EAGDELQILDQTPNQKPPPPGFPPR--------------PPANGSQQGPPPQGGPQQSPL 63
Query: 1000 QNFSTQDYYRPGYNPQHFESQYNPQNYPPVSGPQTGPNDLPMRPISESYLPNNPGTMASA 821
Q QD G Q PQ PP GPQ P P +P P PG
Sbjct: 64 QPGKPQDPPPQGSPQQKPPQPGKPQGPPPPGGPQKKPPQ-PGKPQG----PPPPG--GPQ 116
Query: 820 IKPPHQMVPANIP 782
KPP P P
Sbjct: 117 KKPPQPGKPQGPP 129
>dbj|BAA78424.1| (AB021264) polyprotein [Arabidopsis thaliana]
Length = 1330
Score = 32.5 bits (72), Expect = 9.4
Identities = 47/196 (23%), Positives = 72/196 (35%), Gaps = 12/196 (6%)
Frame = -1
Query: 1150 PQPIRSPSP--TXXXXXXXXXXXXXXXXXXGPERAKSYPGPEAQYGSQQFGTQNFSTQDY 977
P+P SPSP T A S+ GP+ Q N ++
Sbjct: 652 PRPPSSPSPLCTTQVSSSNLPSSSISSPSSSEPTAPSHNGPQPTAQPHQTQNSNSNSPIL 711
Query: 976 YRPGYNPQHFESQYNPQNYPPVSGPQTGPNDLPMRPISESYL---------PNNPGTMAS 824
P NP + P S Q P LP PIS ++ PN+P + ++
Sbjct: 712 NNP-----------NPNSPSPNSPNQNSP--LPQSPISSPHIPTPSTSISEPNSPSSSST 758
Query: 823 AIKPPHQMVPANIPADLGELRALRTNCQ-FNLREYISLQRQRRSGDASMSAYELETRLRN 647
+ P ++PA + + T+ ++ I Q+ S S++A E R
Sbjct: 759 STPPLPPVLPAPPIIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYATSLAA-NSEPR--- 814
Query: 646 QTIFVLNDLRILQGEVRSIAKEAENHRW 563
I + D R Q I + NH W
Sbjct: 815 TAIQAMKDDRWRQAMGSEINAQIGNHTW 842
>sp|O62732|SYN1_CANFA SYNAPSIN I
gb|AAC05207.1| (AF049588) synapsin I [Canis familiaris]
Length = 415
Score = 32.5 bits (72), Expect = 9.4
Identities = 33/96 (34%), Positives = 42/96 (43%), Gaps = 13/96 (13%)
Frame = -1
Query: 1057 RAKSYPGPEAQYGSQQFGTQNFSTQDYYRP---GYNPQHFESQYNPQNYPPVSGP----- 902
R + P P+ Q G Q T+ S P G P + Q PQ P +GP
Sbjct: 275 RPPASPSPQRQAGPPQ-ATRQTSVSGQAPPKASGAPPSGQQRQGPPQKPPGPAGPTRQAS 333
Query: 901 QTGPNDLPMRPISESYLPNNPGTMASAIKP-----PHQMVPANIPADLG 770
Q GP P ++ P+ PG KP P Q VP+ PA G
Sbjct: 334 QAGPMPRTGPPTTQQPRPSGPGPAGRPAKPQLAQKPSQDVPS--PATAG 380
Database: nr
Posted date: Sep 29, 2000 9:53 PM
Number of letters in database: 177,575,912
Number of sequences in database: 565,281
Lambda K H
0.318 0.135 0.00
Gapped
Lambda K H
0.270 0.0470 4.94e-324
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 349999681
Number of Sequences: 565281
Number of extensions: 7243349
Number of successful extensions: 23781
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 23694
Number of HSP's gapped (non-prelim): 85
length of query: 393
length of database: 177,575,912
effective HSP length: 54
effective length of query: 338
effective length of database: 147,050,738
effective search space: 49703149444
effective search space used: 49703149444
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 72 (32.5 bits)