Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA35061.1| (AB015207) ribosomal protein CRP7 [Neurospo... 158 5e-38
emb|CAB77635.1| (AJ390495) ribosomal protein S21 [Candida a... 143 2e-33
ref|NP_012399.1| Ribosomal protein S21B (S26B) (YS25); Rps2... 137 1e-31
ref|NP_012983.1| Ribosomal protein S21A (S26A) (YS25); Rps2... 137 1e-31
sp|P05764|RS21_SCHPO 40S RIBOSOMAL PROTEIN S21 (S28) >gi|82... 126 3e-28
pir||T39757 40s ribosomal protein s21 - fission yeast (Schi... 124 1e-27
emb|CAA82137.1| (Z28283) ORF YKR057w [Saccharomyces cerevis... 124 1e-27
emb|CAB57312.1| (AJ011718) 40S ribosomal protein S21 [Cyano... 106 4e-22
ref|NP_001015.1| ribosomal protein S21 >gi|464710|sp|P35265... 103 2e-21
sp|P05765|RS21_RAT 40S RIBOSOMAL PROTEIN S21 >gi|71045|pir|... 103 2e-21
emb|CAA08751.1| (AJ009557) ribosomal protein S21 [Drosophil... 102 4e-21
sp|P49197|RS21_CAEEL PROBABLE 40S RIBOSOMAL PROTEIN S21 101 7e-21
pir||T28840 hypothetical protein F37C12.11 - Caenorhabditis... 101 7e-21
sp|P35687|RS21_ORYSA 40S RIBOSOMAL PROTEIN S21 >gi|481227|p... 95 9e-19
pir||T02717 ribosomal protein S21 - maize >gi|1707868|emb|C... 92 5e-18
sp|Q41852|RS21_MAIZE 40S RIBOSOMAL PROTEIN S21 >gi|7440559|... 92 8e-18
emb|CAB88351.1| (AL132960) 40S ribosomal protein S21 homolo... 91 1e-17
pir||S51027 differentiation factor, 8.2K, precursor - human... 64 3e-10
emb|CAA56100.2| (X79563) 8.2 kDa differentiation factor [Ho... 64 6e-10
dbj|BAA25821.1| (AB007157) ribosomal protein S21 [Homo sapi... 63 3e-09
dbj|BAA86033.1| (AB026995) loocyte membrane protein [Xenopu... 35 0.81
gb|AAD56316.1|AC009326_3 (AC009326) hypothetical protein [A... 34 1.4
pir||T06823 ribosomal protein S21 - garden pea >gi|3087874|... 34 1.4
emb|CAB88499.1| (AL353817) conserved hypothetical protein [... 34 1.8
gb|AAF60743.1| (AC006797) contains similarity to Pfam famil... 34 2.4
pir||T34369 hypothetical protein T19D12.1 - Caenorhabditis ... 34 2.4
gb|AAC60129.1| (U43200) antifreeze glycopeptide AFGP polypr... 34 2.4
emb|CAC01757.1| (AL391143) putative protein [Arabidopsis th... 34 2.4
gb|AAD52672.1|AF178772_1 (AF178772) 98kDa HDM allergen [Der... 34 2.4
gb|AAC77826.1| (AF082301) arabinogalactan-protein [Arabidop... 33 3.1
gb|AAA21754.1| (L20249) homologous to Saccharopolyspora ery... 33 3.1
gb|AAF75679.1|AF247669_1 (AF247669) opacity factor Sof prec... 33 3.1
emb|CAB06616.1| (Z84818) GP80 [Bovine herpesvirus 4] 33 4.1
pir||PC2022 mucin like protein Muc2 precursor - rat (fragme... 33 4.1
pir||A43932 mucin 2 precursor, intestinal - human (fragments) 33 4.1
emb|CAA67558.1| (X99106) gp340 [Human herpesvirus 4] 33 4.1
gb|AAA59163.1| (M94131) mucin [Homo sapiens] 33 4.1
ref|NP_002448.1| mucin 2, intestinal/tracheal >gi|2506877|s... 33 4.1
gb|AAA59875.1| (M74027) mucin [Homo sapiens] 33 4.1
emb|CAB52444.1| (AL109787) putative protein [Arabidopsis th... 32 5.4
dbj|BAB02066.1| (AB026647) gb|AAF02890.1~gene_id:MJL12.2~si... 32 5.4
gb|AAF58192.1| (AE003813) CG10228 gene product [Drosophila ... 32 5.4
emb|CAA19845.2| (AL031028) /prediction=(method:""genscan"",... 32 5.4
ref|NP_014653.1| induced by cold shock; Tir2p >gi|464887|sp... 32 7.0
sp|Q01168|NUT1_MAGGR NITROGEN REGULATORY PROTEIN NUT1 >gi|1... 32 7.0
ref|NP_012456.1| Similar to plant PR-1 class of pathogen re... 32 7.0
ref|NP_010247.1| Ydl037cp >gi|2131317|pir||S67570 hypotheti... 32 7.0
gb|AAD31493.1|AF138800_1 (AF138800) serum opacity factor pr... 32 7.0
gb|AAC77825.1| (AF082300) arabinogalactan-protein [Arabidop... 32 7.0
emb|CAA52447.1| (X74428) serine-rich protein [Saccharomyces... 32 7.0
pir||T14004 trfA protein - slime mold (Dictyostelium discoi... 32 9.2
gb|AAD51697.1|AF172332_1 (AF172332) major outer envelope gl... 32 9.2
sp|Q07284|VGP3_EBVA8 ENVELOPE GLYCOPROTEIN GP340 (MEMBRANE ... 32 9.2
ref|NP_012685.1| Yjr151cp >gi|1352944|sp|P47179|YJ9P_YEAST ... 32 9.2
>dbj|BAA35061.1| (AB015207) ribosomal protein CRP7 [Neurospora crassa]
Length = 87
Score = 158 bits (396), Expect = 5e-38
Identities = 77/87 (88%), Positives = 82/87 (93%)
Frame = -3
Query: 692 MENDRGEIVDLYVPRKCSATNRIIKAKDHGSVQISIAKVDENGRAIQGENHVYALCGFVR 513
MENDRGEIVDLYVPRKCSAT RIIK+KDHGS QI+IAKVDENGRAIQGEN +YAL GFVR
Sbjct: 1 MENDRGEIVDLYVPRKCSATGRIIKSKDHGSCQITIAKVDENGRAIQGENIIYALSGFVR 60
Query: 512 AMGESDDSLNRLAQRDGLLKSVWSGQR 432
AMGESDDSLNRLAQRDGLLK+VW+ QR
Sbjct: 61 AMGESDDSLNRLAQRDGLLKAVWNPQR 87
>emb|CAB77635.1| (AJ390495) ribosomal protein S21 [Candida albicans]
Length = 87
Score = 143 bits (358), Expect = 2e-33
Identities = 69/87 (79%), Positives = 78/87 (89%)
Frame = -3
Query: 692 MENDRGEIVDLYVPRKCSATNRIIKAKDHGSVQISIAKVDENGRAIQGENHVYALCGFVR 513
MEND+G++V+LYVPRKCSATNRIIKAKDH SVQISIAKVDE+GRAI GEN YAL G+VR
Sbjct: 1 MENDKGQLVELYVPRKCSATNRIIKAKDHASVQISIAKVDEDGRAIAGENITYALSGYVR 60
Query: 512 AMGESDDSLNRLAQRDGLLKSVWSGQR 432
GE+DDSLNRLAQ+DGLLK+VWS R
Sbjct: 61 GRGEADDSLNRLAQQDGLLKNVWSYSR 87
>ref|NP_012399.1| Ribosomal protein S21B (S26B) (YS25); Rps21bp
pir||S56918 ribosomal protein S21.e.B, cytosolic - yeast (Saccharomyces
cerevisiae)
emb|CAA60819.1| (X87371) homologous to ORF YKR057w; ORF19 [Saccharomyces
cerevisiae]
emb|CAA89431.1| (Z49411) ORF YJL136c [Saccharomyces cerevisiae]
Length = 87
Score = 137 bits (342), Expect = 1e-31
Identities = 66/87 (75%), Positives = 75/87 (85%)
Frame = -3
Query: 692 MENDRGEIVDLYVPRKCSATNRIIKAKDHGSVQISIAKVDENGRAIQGENHVYALCGFVR 513
MEND+G++V+LYVPRKCSATNRIIKA DH SVQI++AKVDE GRAI GE YAL G+VR
Sbjct: 1 MENDKGQLVELYVPRKCSATNRIIKADDHASVQINVAKVDEEGRAIPGEYITYALSGYVR 60
Query: 512 AMGESDDSLNRLAQRDGLLKSVWSGQR 432
+ GESDDSLNRLAQ DGLLK+VWS R
Sbjct: 61 SRGESDDSLNRLAQNDGLLKNVWSYSR 87
>ref|NP_012983.1| Ribosomal protein S21A (S26A) (YS25); Rps21ap
sp|P05760|RS21_YEAST 40S RIBOSOMAL PROTEIN S21 (S26) (YS25)
pir||R3BY1E ribosomal protein S21.e.A, cytosolic - yeast (Saccharomyces
cerevisiae)
emb|CAA30671.1| (X07811) YS25 protein [Saccharomyces cerevisiae]
emb|CAA82135.1| (Z28282) ORF YKR057w [Saccharomyces cerevisiae]
Length = 87
Score = 137 bits (342), Expect = 1e-31
Identities = 66/87 (75%), Positives = 75/87 (85%)
Frame = -3
Query: 692 MENDRGEIVDLYVPRKCSATNRIIKAKDHGSVQISIAKVDENGRAIQGENHVYALCGFVR 513
MEND+G++V+LYVPRKCSATNRIIKA DH SVQI++AKVDE GRAI GE YAL G+VR
Sbjct: 1 MENDKGQLVELYVPRKCSATNRIIKADDHASVQINVAKVDEEGRAIPGEYVTYALSGYVR 60
Query: 512 AMGESDDSLNRLAQRDGLLKSVWSGQR 432
+ GESDDSLNRLAQ DGLLK+VWS R
Sbjct: 61 SRGESDDSLNRLAQNDGLLKNVWSYSR 87
>sp|P05764|RS21_SCHPO 40S RIBOSOMAL PROTEIN S21 (S28)
pir||B23862 ribosomal protein S21.e - fission yeast (Schizosaccharomyces pombe)
Length = 87
Score = 126 bits (313), Expect = 3e-28
Identities = 59/87 (67%), Positives = 70/87 (79%)
Frame = -3
Query: 692 MENDRGEIVDLYVPRKCSATNRIIKAKDHGSVQISIAKVDENGRAIQGENHVYALCGFVR 513
MEN+ G++VDLYVPRKCSATNRII+AKDH SVQI++A VD+ GR I GE YA+ GFVR
Sbjct: 1 MENEAGQLVDLYVPRKCSATNRIIQAKDHASVQINVAAVDQEGRQIPGEKTTYAISGFVR 60
Query: 512 AMGESDDSLNRLAQRDGLLKSVWSGQR 432
+ GESDD +NRL +DGLL VWS QR
Sbjct: 61 SKGESDDDINRLQTQDGLLTGVWSYQR 87
>pir||T39757 40s ribosomal protein s21 - fission yeast (Schizosaccharomyces
pombe)
emb|CAA22666.1| (AL035077) 40s ribosomal protein s21 [Schizosaccharomyces pombe]
Length = 87
Score = 124 bits (308), Expect = 1e-27
Identities = 58/87 (66%), Positives = 69/87 (78%)
Frame = -3
Query: 692 MENDRGEIVDLYVPRKCSATNRIIKAKDHGSVQISIAKVDENGRAIQGENHVYALCGFVR 513
MEN+ G++VDLYVPRKCSATNRII+AKDH SVQI++ VD GR I GE YA+ GFVR
Sbjct: 1 MENEAGQLVDLYVPRKCSATNRIIQAKDHASVQINVCAVDAEGRQIPGEKTTYAISGFVR 60
Query: 512 AMGESDDSLNRLAQRDGLLKSVWSGQR 432
+ GESDD +NRL +DGLL+ VWS QR
Sbjct: 61 SKGESDDCINRLTTQDGLLEGVWSYQR 87
>emb|CAA82137.1| (Z28283) ORF YKR057w [Saccharomyces cerevisiae]
Length = 79
Score = 124 bits (308), Expect = 1e-27
Identities = 61/79 (77%), Positives = 67/79 (84%)
Frame = -3
Query: 668 VDLYVPRKCSATNRIIKAKDHGSVQISIAKVDENGRAIQGENHVYALCGFVRAMGESDDS 489
V+LYVPRKCSATNRIIKA DH SVQI++AKVDE GRAI GE YAL G+VR+ GESDDS
Sbjct: 1 VELYVPRKCSATNRIIKADDHASVQINVAKVDEEGRAIPGEYVTYALSGYVRSRGESDDS 60
Query: 488 LNRLAQRDGLLKSVWSGQR 432
LNRLAQ DGLLK+VWS R
Sbjct: 61 LNRLAQNDGLLKNVWSYSR 79
>emb|CAB57312.1| (AJ011718) 40S ribosomal protein S21 [Cyanophora paradoxa]
Length = 82
Score = 106 bits (261), Expect = 4e-22
Identities = 48/82 (58%), Positives = 62/82 (75%)
Frame = -3
Query: 692 MENDRGEIVDLYVPRKCSATNRIIKAKDHGSVQISIAKVDENGRAIQGENHVYALCGFVR 513
M+ND G+IVDLY+PRKCSATNR+I A DH +VQI++ VD N G+ +ALCGFVR
Sbjct: 1 MQNDEGKIVDLYIPRKCSATNRLISATDHAAVQINVGHVDPNSGLYTGDYTTFALCGFVR 60
Query: 512 AMGESDDSLNRLAQRDGLLKSV 447
+MGESD +LNRL + GL K++
Sbjct: 61 SMGESDAALNRLCVKHGLAKAI 82
>ref|NP_001015.1| ribosomal protein S21
sp|P35265|RS21_HUMAN 40S RIBOSOMAL PROTEIN S21
pir||S34108 ribosomal protein S21, cytosolic - human
gb|AAA99893.1| (L04483) ribosomal protein S21 [Homo sapiens]
emb|CAB83213.1| (AJ250907) ribosomal protein S21 [Homo sapiens]
Length = 83
Score = 103 bits (254), Expect = 2e-21
Identities = 47/79 (59%), Positives = 62/79 (77%)
Frame = -3
Query: 692 MENDRGEIVDLYVPRKCSATNRIIKAKDHGSVQISIAKVDENGRAIQGENHVYALCGFVR 513
M+ND GE VDLYVPRKCSA+NRII AKDH S+Q+++A+VD+ G+ YA+CG +R
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 512 AMGESDDSLNRLAQRDGLL 456
MGESDDS+ RLA+ DG++
Sbjct: 61 RMGESDDSILRLAKADGIV 79
>sp|P05765|RS21_RAT 40S RIBOSOMAL PROTEIN S21
pir||R3RT21 ribosomal protein S21 - rat
emb|CAA55658.1| (X79059) ribosomal protein S21 [Rattus norvegicus]
Length = 83
Score = 103 bits (254), Expect = 2e-21
Identities = 46/79 (58%), Positives = 61/79 (76%)
Frame = -3
Query: 692 MENDRGEIVDLYVPRKCSATNRIIKAKDHGSVQISIAKVDENGRAIQGENHVYALCGFVR 513
M+ND GE VDLYVPRKCSA+NRII AKDH S+Q+++A+VD + G+ Y +CG +R
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIAAKDHASIQMNVAEVDRSTGRFNGQFKTYGICGAIR 60
Query: 512 AMGESDDSLNRLAQRDGLL 456
MGESDDS+ RLA+ DG++
Sbjct: 61 RMGESDDSILRLAKADGIV 79
>emb|CAA08751.1| (AJ009557) ribosomal protein S21 [Drosophila melanogaster]
gb|AAF51191.1| (AE003581) oho23B gene product [Drosophila melanogaster]
Length = 83
Score = 102 bits (252), Expect = 4e-21
Identities = 52/79 (65%), Positives = 62/79 (77%), Gaps = 1/79 (1%)
Frame = -3
Query: 692 MENDRGEIVDLYVPRKCSATNRIIKAKDHGSVQISIAKVD-ENGRAIQGENHVYALCGFV 516
MEND GE VDLYVPRKCSA+NRII AKDH SVQ+SI VD E GR G + YA+CG +
Sbjct: 1 MENDAGENVDLYVPRKCSASNRIIHAKDHASVQLSIVDVDPETGRQTDG-SKTYAICGEI 59
Query: 515 RAMGESDDSLNRLAQRDGLL 456
R MGESDD + RLA++DG++
Sbjct: 60 RRMGESDDCIVRLAKKDGII 79
>sp|P49197|RS21_CAEEL PROBABLE 40S RIBOSOMAL PROTEIN S21
Length = 88
Score = 101 bits (250), Expect = 7e-21
Identities = 49/79 (62%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Frame = -3
Query: 692 MENDRGEIVDLYVPRKCSATNRIIKAKDHGSVQISIAKVD-ENGRAIQGENHVYALCGFV 516
M+ND G+ V+LYVPRKCS++NRII KDH SVQI VD E GR I G++ YA+CG +
Sbjct: 1 MQNDAGQTVELYVPRKCSSSNRIIGPKDHASVQIDFVDVDPETGRMIPGKSTRYAICGAI 60
Query: 515 RAMGESDDSLNRLAQRDGLL 456
R MGESDD++ RLAQ+DGL+
Sbjct: 61 RRMGESDDAILRLAQKDGLV 80
>pir||T28840 hypothetical protein F37C12.11 - Caenorhabditis elegans
gb|AAC48297.1| (U00033) similar to ribosomal protein S21 [Caenorhabditis elegans]
Length = 151
Score = 101 bits (250), Expect = 7e-21
Identities = 49/79 (62%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Frame = -3
Query: 692 MENDRGEIVDLYVPRKCSATNRIIKAKDHGSVQISIAKVD-ENGRAIQGENHVYALCGFV 516
M+ND G+ V+LYVPRKCS++NRII KDH SVQI VD E GR I G++ YA+CG +
Sbjct: 64 MQNDAGQTVELYVPRKCSSSNRIIGPKDHASVQIDFVDVDPETGRMIPGKSTRYAICGAI 123
Query: 515 RAMGESDDSLNRLAQRDGLL 456
R MGESDD++ RLAQ+DGL+
Sbjct: 124 RRMGESDDAILRLAQKDGLV 143
>sp|P35687|RS21_ORYSA 40S RIBOSOMAL PROTEIN S21
pir||S38357 ribosomal protein S21, cytosolic - rice
dbj|BAA02158.1| (D12633) 40S subunit ribosomal protein [Oryza sativa]
Length = 82
Score = 94.8 bits (232), Expect = 9e-19
Identities = 46/75 (61%), Positives = 58/75 (77%)
Frame = -3
Query: 692 MENDRGEIVDLYVPRKCSATNRIIKAKDHGSVQISIAKVDENGRAIQGENHVYALCGFVR 513
M+N+ G++VDLYVPRKCSATNRII AKDH SVQI+I VDENG G +AL GF+R
Sbjct: 1 MQNEEGQMVDLYVPRKCSATNRIITAKDHASVQINIGHVDENG-LYDGRFTTFALSGFIR 59
Query: 512 AMGESDDSLNRLAQR 468
A G++D +L+RL Q+
Sbjct: 60 AQGDADSALDRLWQK 74
>pir||T02717 ribosomal protein S21 - maize
emb|CAA70852.1| (Y09636) 40S ribosomal subunit protein S21 [Zea mays]
Length = 81
Score = 92.4 bits (226), Expect = 5e-18
Identities = 46/75 (61%), Positives = 56/75 (74%)
Frame = -3
Query: 692 MENDRGEIVDLYVPRKCSATNRIIKAKDHGSVQISIAKVDENGRAIQGENHVYALCGFVR 513
M+N+ G+ VDLYVPRKCSATNRII AKDH SVQI+I +D NG G +AL GFVR
Sbjct: 1 MQNEEGKTVDLYVPRKCSATNRIITAKDHASVQINIGHLDANG-LYDGHFTTFALSGFVR 59
Query: 512 AMGESDDSLNRLAQR 468
A G++D SL+RL Q+
Sbjct: 60 AQGDADSSLDRLRQK 74
>sp|Q41852|RS21_MAIZE 40S RIBOSOMAL PROTEIN S21
pir||T03945 ribosomal protein S21 - maize
emb|CAA67225.1| (X98656) ribosomal protein S21 [Zea mays]
Length = 81
Score = 91.7 bits (224), Expect = 8e-18
Identities = 46/75 (61%), Positives = 56/75 (74%)
Frame = -3
Query: 692 MENDRGEIVDLYVPRKCSATNRIIKAKDHGSVQISIAKVDENGRAIQGENHVYALCGFVR 513
M+N+ G+ VDLYVPRKCSATNRII AKDH SVQI+I +D NG G +AL GFVR
Sbjct: 1 MQNEEGKTVDLYVPRKCSATNRIITAKDHASVQINIGHLDANG-LYDGHFTTFALSGFVR 59
Query: 512 AMGESDDSLNRLAQR 468
A G++D SL+RL Q+
Sbjct: 60 AQGDADSSLDRLWQK 74
>emb|CAB88351.1| (AL132960) 40S ribosomal protein S21 homolog [Arabidopsis thaliana]
Length = 82
Score = 90.9 bits (222), Expect = 1e-17
Identities = 41/75 (54%), Positives = 57/75 (75%)
Frame = -3
Query: 692 MENDRGEIVDLYVPRKCSATNRIIKAKDHGSVQISIAKVDENGRAIQGENHVYALCGFVR 513
MEND G++ +LY+PRKCSATNR+I +KDH SVQ++I +D NG G+ +ALCGFVR
Sbjct: 1 MENDAGQVTELYIPRKCSATNRMITSKDHASVQLNIGHLDANG-LYTGQFTTFALCGFVR 59
Query: 512 AMGESDDSLNRLAQR 468
A G++D ++RL Q+
Sbjct: 60 AQGDADSGVDRLWQK 74
>pir||S51027 differentiation factor, 8.2K, precursor - human
prf||2102276A 8.2kD differentiation factor [Homo sapiens]
Length = 97
Score = 64.4 bits (154), Expect(2) = 3e-10
Identities = 28/46 (60%), Positives = 37/46 (79%)
Frame = -3
Query: 692 MENDRGEIVDLYVPRKCSATNRIIKAKDHGSVQISIAKVDENGRAI 555
M+ND GE VDLYVPRKCSA+NRII AKDH S+Q+++A++ + I
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVARLTRSQAGI 46
Score = 22.3 bits (46), Expect(2) = 3e-10
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = -1
Query: 580 RLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWP 473
RLTR+ A SA W P +DWP
Sbjct: 38 RLTRSQAGIMASLLKMLSAGPFVGWVSQMIPFSDWP 73
>emb|CAA56100.2| (X79563) 8.2 kDa differentiation factor [Homo sapiens]
Length = 97
Score = 64.0 bits (153), Expect(2) = 6e-10
Identities = 27/39 (69%), Positives = 35/39 (89%)
Frame = -3
Query: 692 MENDRGEIVDLYVPRKCSATNRIIKAKDHGSVQISIAKV 576
M+ND GE VDLYVPRKCSA+NRII AKDH S+Q+++A++
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVARL 39
Score = 21.6 bits (44), Expect(2) = 6e-10
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = -1
Query: 580 RLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWP 473
RLTR+ A SA W P +DWP
Sbjct: 38 RLTRSQAGLMASLKLMLSAGPFVGWVSQMIPFSDWP 73
>dbj|BAA25821.1| (AB007157) ribosomal protein S21 [Homo sapiens]
Length = 54
Score = 63.2 bits (151), Expect = 3e-09
Identities = 29/54 (53%), Positives = 40/54 (73%)
Frame = -3
Query: 632 NRIIKAKDHGSVQISIAKVDENGRAIQGENHVYALCGFVRAMGESDDSLNRLAQ 471
NRII AKDH S+Q+++A+VD+ G+ YA+CG +R MGESDDS+ RLA+
Sbjct: 1 NRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGESDDSILRLAK 54
>dbj|BAA86033.1| (AB026995) loocyte membrane protein [Xenopus laevis]
Length = 404
Score = 35.2 bits (79), Expect = 0.81
Identities = 24/55 (43%), Positives = 33/55 (59%)
Frame = -1
Query: 598 SRSPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRASGADS 434
SRS S +T ++ S RTTS P A ++ P ATTPS P+V+++ AS A S
Sbjct: 208 SRSQSAAVTPSSTTSSTRTTSAPVAPAAAP---ATTPS---PAVSSNDGASEATS 256
>gb|AAD56316.1|AC009326_3 (AC009326) hypothetical protein [Arabidopsis thaliana]
gb|AAF07827.1|AC010871_3 (AC010871) hypothetical protein [Arabidopsis thaliana]
Length = 541
Score = 34.4 bits (77), Expect = 1.4
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 8/105 (7%)
Frame = -1
Query: 739 TRHSKTTQNHPPKQPKWRTTAARLWTFXXXXXXXXXXXXXXXRITALSRSPSPR------ 578
TR S + + P + TAAR T T +P P
Sbjct: 179 TRASNSRSSTPTSRAT--LTAARATTSTAAPRTTTTSSGSARSATPTRSNPRPSSASSKK 236
Query: 577 -LTRTAVPSRARTTST-PSAVSSEPWARATTPSTDWPSVTASSRASGADSDKS 425
++R A P+R +T T PS VSS+ +R T+PS P+V + S+A + S
Sbjct: 237 PVSRPATPTRRPSTPTGPSIVSSKAPSRGTSPS---PTVNSLSKAPSRGTSPS 286
>pir||T06823 ribosomal protein S21 - garden pea
emb|CAA76644.1| (Y17134) ribosomal protein S21 [Pisum sativum]
Length = 94
Score = 34.4 bits (77), Expect = 1.4
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = -3
Query: 608 HGSVQISIAKVDENGRAIQGENHVYALCGFVRA 510
H SVQI++ +DE+G G +ALCGF RA
Sbjct: 21 HASVQINVGHLDESG-VYNGHFSTFALCGFTRA 52
>emb|CAB88499.1| (AL353817) conserved hypothetical protein [Neurospora crassa]
Length = 440
Score = 34.0 bits (76), Expect = 1.8
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -1
Query: 586 SPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRA 449
SP T T P R TT P PWA+ ++DW + + + RA
Sbjct: 80 SPTFTPTPTPWRPTTTRLPPITGPPPWAQQRRSASDWWNRSFNERA 125
>gb|AAF60743.1| (AC006797) contains similarity to Pfam family PF00078 (Reverse
transcriptase (RNA-dependent)), score=79.6, E=6.3e-20,
E=1 [Caenorhabditis elegans]
Length = 1079
Score = 33.6 bits (75), Expect = 2.4
Identities = 27/106 (25%), Positives = 42/106 (39%), Gaps = 7/106 (6%)
Frame = -1
Query: 739 TRHSKTTQNHPPKQ---PKWRTTAARLWTFXXXXXXXXXXXXXXXRITALSRSPSPRLTR 569
T +TT PP P TT T ITA + + +
Sbjct: 377 TTAPETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTITAPETTSTEPPSS 436
Query: 568 TAVPSRARTTSTPSAVSSEPWARATTP----STDWPSVTASSRASGADSDKST 422
+ P + TT+ P S+EP + +TTP +T P T++ S + + T
Sbjct: 437 STTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQT 489
Score = 33.2 bits (74), Expect = 3.1
Identities = 27/106 (25%), Positives = 39/106 (36%), Gaps = 3/106 (2%)
Frame = -1
Query: 739 TRHSKTTQNHPPKQ---PKWRTTAARLWTFXXXXXXXXXXXXXXXRITALSRSPSPRLTR 569
T +TT PP P TT T ITA + + +
Sbjct: 837 TTAPETTSTEPPSSSTSPVQTTTTTAPETTSTEPPSSSTTPVQTTTITAPETTSTEPPSS 896
Query: 568 TAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRASGADSDKST 422
+ P + TT+ P S+EP + +TTP ++TA S ST
Sbjct: 897 STTPVQTTTTTAPETTSTEPPSSSTTP-VQTTTITAPETTSTEPPSSST 944
Score = 32.8 bits (73), Expect = 4.1
Identities = 27/106 (25%), Positives = 41/106 (38%), Gaps = 7/106 (6%)
Frame = -1
Query: 739 TRHSKTTQNHPPKQ---PKWRTTAARLWTFXXXXXXXXXXXXXXXRITALSRSPSPRLTR 569
T +TT PP P TT T ITA + + +
Sbjct: 699 TTAPETTSTEPPSSSTSPVQTTTTTAPETTSTEPPSSSTTPVQTTTITAPETTSTEPPSS 758
Query: 568 TAVPSRARTTSTPSAVSSEPWARATTP----STDWPSVTASSRASGADSDKST 422
+ P + TT+ P S+EP + + TP +T P T++ S + S T
Sbjct: 759 STTPVQTTTTTAPETTSTEPPSSSNTPVQTTTTTAPETTSTEPPSSSTSPVQT 811
Score = 32.8 bits (73), Expect = 4.1
Identities = 27/102 (26%), Positives = 42/102 (40%), Gaps = 10/102 (9%)
Frame = -1
Query: 727 KTTQNHPPKQPKWRTTAARLWTFXXXXXXXXXXXXXXXRITALSRSPSPRLTRTAVPSRA 548
+TT PP TT + T + + +P TRT PS +
Sbjct: 312 ETTSTEPPSSS---TTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTRTEPPSSS 368
Query: 547 RT------TSTPSAVSSEPWARATTP----STDWPSVTASSRASGADSDKST 422
T T+ P S+EP + +TTP +T P T++ S + + T
Sbjct: 369 TTPVQNTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQT 420
Score = 32.5 bits (72), Expect = 5.4
Identities = 26/106 (24%), Positives = 42/106 (39%), Gaps = 7/106 (6%)
Frame = -1
Query: 739 TRHSKTTQNHPPKQ---PKWRTTAARLWTFXXXXXXXXXXXXXXXRITALSRSPSPRLTR 569
T +TT PP P TT T TA + + +
Sbjct: 584 TTAPETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSS 643
Query: 568 TAVPSRARTTSTPSAVSSEPWARATTP----STDWPSVTASSRASGADSDKST 422
+ P + TT+ P S+EP + +TTP +T P T++ S +++ T
Sbjct: 644 STTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSNTPVQT 696
Score = 32.1 bits (71), Expect = 7.0
Identities = 27/106 (25%), Positives = 42/106 (39%), Gaps = 10/106 (9%)
Frame = -1
Query: 739 TRHSKTTQNHPPKQPKWRTTAARLWTFXXXXXXXXXXXXXXXRITALSRSPSPRLTRTAV 560
T +TT PP TT + T + + +P T T
Sbjct: 469 TTAPETTSTEPPSSS---TTPVQTTTITAPETTSTEPPSSSTTPVQTTTTTAPETTSTES 525
Query: 559 PS------RARTTSTPSAVSSEPWARATTP----STDWPSVTASSRASGADSDKST 422
PS + TT+ P S+EP + +TTP +T P T++ S + + T
Sbjct: 526 PSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQT 581
Score = 32.1 bits (71), Expect = 7.0
Identities = 26/100 (26%), Positives = 39/100 (39%), Gaps = 7/100 (7%)
Frame = -1
Query: 739 TRHSKTTQNHPPKQ---PKWRTTAARLWTFXXXXXXXXXXXXXXXRITALSRSPSPRLTR 569
T +TT PP P TT T ITA + + +
Sbjct: 262 TTAPETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTITAPETTSTEPPSS 321
Query: 568 TAVPSRARTTSTPSAVSSEPWARATTP----STDWPSVTASSRASGA 440
+ P + TT+ P S+EP + +TTP +T P T + S +
Sbjct: 322 STTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTRTEPPSSS 368
Score = 32.1 bits (71), Expect = 7.0
Identities = 25/102 (24%), Positives = 40/102 (38%), Gaps = 7/102 (6%)
Frame = -1
Query: 727 KTTQNHPPKQ---PKWRTTAARLWTFXXXXXXXXXXXXXXXRITALSRSPSPRLTRTAVP 557
+TT PP P TT T TA + + + + P
Sbjct: 496 ETTSTEPPSSSTTPVQTTTTTAPETTSTESPSSSTTPVQTTTTTAPETTSTEPPSSSTTP 555
Query: 556 SRARTTSTPSAVSSEPWARATTP----STDWPSVTASSRASGADSDKST 422
+ TT+ P S+EP + +TTP +T P T++ S + + T
Sbjct: 556 VQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQT 604
Score = 32.1 bits (71), Expect = 7.0
Identities = 26/106 (24%), Positives = 41/106 (38%), Gaps = 7/106 (6%)
Frame = -1
Query: 739 TRHSKTTQNHPPKQ---PKWRTTAARLWTFXXXXXXXXXXXXXXXRITALSRSPSPRLTR 569
T +TT PP P TT T TA + + +
Sbjct: 193 TTAPETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTSTESPSS 252
Query: 568 TAVPSRARTTSTPSAVSSEPWARATTP----STDWPSVTASSRASGADSDKST 422
+ P + TT+ P S+EP + +TTP +T P T++ S + + T
Sbjct: 253 STTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQT 305
>pir||T34369 hypothetical protein T19D12.1 - Caenorhabditis elegans
gb|AAC24428.1| (U41263) similar to A. faecalis poly(3-hydroxybutyrate)
depolymerase (SP:PHB_ALCFA, P12625); similar to zinc
finger protein 40 (SP:ZEP1_HUMAN, P15822)
[Caenorhabditis elegans]
Length = 1777
Score = 33.6 bits (75), Expect = 2.4
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = -1
Query: 598 SRSPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRASGADSDKS 425
S S S +T T PS T P++ S++P + P+T +VTAS +GA S S
Sbjct: 472 SGSSSTVVTSTITPS---TQGVPTSTSNQPTPSTSNPTTPKSTVTASPSTTGATSTAS 526
>gb|AAC60129.1| (U43200) antifreeze glycopeptide AFGP polyprotein precursor
[Boreogadus saida]
Length = 507
Score = 33.6 bits (75), Expect = 2.4
Identities = 25/81 (30%), Positives = 36/81 (43%), Gaps = 7/81 (8%)
Frame = -1
Query: 682 TAARLWTFXXXXXXXXXXXXXXXRITALSRSPSPRLTRTAVPSRARTTSTPS-------A 524
TAA T TA + + R R A P+ A T +T + A
Sbjct: 63 TAATPATAATPATAATAATTAATAATAATAATPARAARAATPATAATPATAATAATAATA 122
Query: 523 VSSEPWARATTPSTDWPSVTASSRASGA 440
++E ARA TP+T TA++ A+ A
Sbjct: 123 ATAETPARAATPATAATPATAATPATAA 150
Score = 33.2 bits (74), Expect = 3.1
Identities = 19/56 (33%), Positives = 31/56 (54%)
Frame = -1
Query: 607 TALSRSPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRASGA 440
TA + + + R A P+ A T +TP+ + ARA TP+T + TA++ A+ A
Sbjct: 154 TAATSATAATAARAATPATAATPATPATAARA--ARAATPATAATAATAATAATAA 207
>emb|CAC01757.1| (AL391143) putative protein [Arabidopsis thaliana]
Length = 927
Score = 33.6 bits (75), Expect = 2.4
Identities = 29/81 (35%), Positives = 39/81 (47%), Gaps = 3/81 (3%)
Frame = +3
Query: 66 DLSATA--FSEPNQSAARRLSE*PQNPRSRLTCKVCPRRLCQPYRGIVTSSSHLQTRIRD 239
D+S TA F +P S P N R + P + R +V SS H +TR RD
Sbjct: 108 DISTTASQFEQPGLSNGENPVREPTNGSPRWGGLMMPSDI----RELVRSSIHKETRTRD 163
Query: 240 IVMLSQN-RAERLEVDLLDAANPS 308
LSQ ++ R V LL ++PS
Sbjct: 164 EEALSQQPKSARANVSLLKESSPS 187
>gb|AAD52672.1|AF178772_1 (AF178772) 98kDa HDM allergen [Dermatophagoides farinae]
Length = 555
Score = 33.6 bits (75), Expect = 2.4
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -1
Query: 607 TALSRSPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRAS 446
T + +PSP T T PS T+TPS + P P+T PS T + S
Sbjct: 439 TTPTTTPSPT-TPTTTPSPTTPTTTPSPTTPTPTTPTPAPTTSTPSPTTTEHTS 491
>gb|AAC77826.1| (AF082301) arabinogalactan-protein [Arabidopsis thaliana]
gb|AAD38870.1|AF060874_1 (AF060874) AtAGP4 [Arabidopsis thaliana]
emb|CAB89400.1| (AL353995) AtAGP4 [Arabidopsis thaliana]
Length = 135
Score = 33.2 bits (74), Expect = 3.1
Identities = 16/48 (33%), Positives = 27/48 (55%)
Frame = -1
Query: 607 TALSRSPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVT 464
+AL+++P+P T T P+ +TP V++ P A P+T P+ T
Sbjct: 18 SALAQAPAPTPTATPPPATPPPVATPPPVATPPPAATPAPATPPPAAT 65
>gb|AAA21754.1| (L20249) homologous to Saccharopolyspora erythraea beta-ketoacyl
synthase [Streptomyces coriofaciens]
Length = 527
Score = 33.2 bits (74), Expect = 3.1
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = -1
Query: 595 RSPSPRLTRTAVPS--RARTTSTPSAVSSEPWARATTPSTDWPSVTASSRASGADSDKST 422
R+ P R+A PS R+R S+ SA S PW S P+ A S + ST
Sbjct: 390 RTQDPAACRSATPSTPRSRNRSSSSARSPAPWRTPNRASPSSPTSPAPSPRPVSSPIPST 449
Query: 421 KCG 413
CG
Sbjct: 450 GCG 452
>gb|AAF75679.1|AF247669_1 (AF247669) opacity factor Sof precursor [Streptococcus pyogenes]
Length = 207
Score = 33.2 bits (74), Expect = 3.1
Identities = 24/81 (29%), Positives = 41/81 (49%), Gaps = 3/81 (3%)
Frame = -1
Query: 586 SPRLTRTAVPSRARTTSTPSAVSSE---PWARATTPSTDWPSVTASSRASGADSDKSTKC 416
+P+L P+ T+S S SSE P A +TT S S T +S ++G++ T+
Sbjct: 70 TPQLQTQTPPAATSTSSASSTSSSEDKAPKAASTTSS----SATVASPSNGSNQGAGTEA 125
Query: 415 GKKLLDIWF*ESSKRNSDTNGPQG 344
+++D+ K +S+ N G
Sbjct: 126 APQMMDVEKYTVDKESSELNIKDG 149
>emb|CAB06616.1| (Z84818) GP80 [Bovine herpesvirus 4]
Length = 273
Score = 32.8 bits (73), Expect = 4.1
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = -1
Query: 607 TALSRSPSPR---LTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRASGAD 437
T+ SPSP + TA S + TSTP+A ++ + +T +T S T SS AS +
Sbjct: 59 TSSVSSPSPSSSSVPSTATSSSSSPTSTPTATTTTATSSTSTNTTSSVSTTVSSTASQST 118
Query: 436 SDKST 422
+ ST
Sbjct: 119 TLTST 123
>pir||PC2022 mucin like protein Muc2 precursor - rat (fragment)
emb|CAA82313.1| (Z29072) mucin [Rattus norvegicus]
Length = 235
Score = 32.8 bits (73), Expect = 4.1
Identities = 21/62 (33%), Positives = 33/62 (52%), Gaps = 3/62 (4%)
Frame = -1
Query: 607 TALSRSPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPS---TDWPSVTASSRASGAD 437
T + S +P +T T+ P R+ TT TPS VS+ TTP+ T P+ T + ++
Sbjct: 159 TTQTTSATPIVTETSTP-RSTTTQTPSTVSTTTGTPTTTPTIGKTTTPTSTVTETSTPTS 217
Query: 436 SDKST 422
+ T
Sbjct: 218 TTTQT 222
>pir||A43932 mucin 2 precursor, intestinal - human (fragments)
Length = 3020
Score = 32.8 bits (73), Expect = 4.1
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = -1
Query: 592 SPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRASGADSDKST 422
+PSP +T T P T S+P +++ P TT +T P+ T SS + + ST
Sbjct: 1664 TPSPPITTTTTPPPTTTPSSP--ITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSST 1718
>emb|CAA67558.1| (X99106) gp340 [Human herpesvirus 4]
Length = 856
Score = 32.8 bits (73), Expect = 4.1
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = -1
Query: 607 TALSRSPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRASGA 440
T + SP L +T+ P+ A TT TP+A S P TP+ P+V +S + A
Sbjct: 529 TPTPNATSPTLGKTS-PTSAVTTPTPNATSPTPAVTTPTPNATSPTVGETSPQANA 583
>gb|AAA59163.1| (M94131) mucin [Homo sapiens]
Length = 1270
Score = 32.8 bits (73), Expect = 4.1
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = -1
Query: 592 SPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRASGADSDKST 422
+PSP +T T P T S+P +++ P TT +T P+ T SS + + ST
Sbjct: 1039 TPSPPITTTTTPPPTTTPSSP--ITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSST 1093
>ref|NP_002448.1| mucin 2, intestinal/tracheal
sp|Q02817|MUC2_HUMAN MUCIN 2 PRECURSOR (INTESTINAL MUCIN 2)
gb|AAB95295.1| (L21998) mucin [Homo sapiens]
Length = 5179
Score = 32.8 bits (73), Expect = 4.1
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = -1
Query: 592 SPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRASGADSDKST 422
+PSP +T T P T S+P +++ P TT +T P+ T SS + + ST
Sbjct: 1664 TPSPPITTTTTPPPTTTPSSP--ITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSST 1718
Score = 32.1 bits (71), Expect = 7.0
Identities = 25/106 (23%), Positives = 40/106 (37%), Gaps = 2/106 (1%)
Frame = -1
Query: 739 TRHSKTTQNHPPKQPKWRTTAARLWTFXXXXXXXXXXXXXXXRITALSRSPSPRLTRT-- 566
T + TT+N P TT + T ++ +P+P T+T
Sbjct: 1884 TMTTTTTENPTPPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPT 1943
Query: 565 AVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRASGADSDKST 422
P TT TP+ + TTP T +VT + +G + +T
Sbjct: 1944 TTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 1991
>gb|AAA59875.1| (M74027) mucin [Homo sapiens]
Length = 573
Score = 32.8 bits (73), Expect = 4.1
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = -1
Query: 592 SPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRASGADSDKST 422
+PSP +T T P T S+P +++ P TT +T P+ T SS + + ST
Sbjct: 322 TPSPPITTTTTPPPTTTPSSP--ITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSST 376
>emb|CAB52444.1| (AL109787) putative protein [Arabidopsis thaliana]
emb|CAB79789.1| (AL161577) putative protein [Arabidopsis thaliana]
Length = 644
Score = 32.5 bits (72), Expect = 5.4
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = -1
Query: 607 TALSRSPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPS 470
T R PSP +TR V S +++ + AVS+E +T PS PS
Sbjct: 42 TKNGRCPSPSVTRPTVSSSSQSVAAKRAVSAERKRPSTPPSPTSPS 87
>dbj|BAB02066.1| (AB026647) gb|AAF02890.1~gene_id:MJL12.2~similar to unknown protein
[Arabidopsis thaliana]
Length = 242
Score = 32.5 bits (72), Expect = 5.4
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = +3
Query: 321 LPSCPNPKPCGPFVSEFLFEDSQNQMSSNFFPHFVDLSLSAPDALEEAVTLGQSVEGVVA 500
LP CP P PF +L +DS+ Q ++++ +++L+++ D EA G S +V
Sbjct: 123 LPECP---PENPFEIYYLMKDSELQENNDWIRLYLELAVATTDRNREASDFGLSNLEIVN 179
Query: 501 LA 506
+A
Sbjct: 180 VA 181
>gb|AAF58192.1| (AE003813) CG10228 gene product [Drosophila melanogaster]
Length = 1945
Score = 32.5 bits (72), Expect = 5.4
Identities = 24/80 (30%), Positives = 38/80 (47%)
Frame = -1
Query: 598 SRSPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRASGADSDKSTK 419
S S S +R S++ TTS+ S+ S T S++ P+V S + + DSD+ +
Sbjct: 363 SSSHSSSSSRKRSESKSSTTSSSSSSSDVRHKGVTASSSNQPTVKRSGKITSKDSDRYVR 422
Query: 418 CGKKLLDIWF*ESSKRNSDT 359
G L S+KR S +
Sbjct: 423 NGSPL------GSAKRKSSS 436
>emb|CAA19845.2| (AL031028) /prediction=(method:""genscan"", version:""1.0"",
score:""477.26"")~/prediction=(method:""genefinder"",
version:""084"") [Drosophila melanogaster]
gb|AAF45644.1| (AE003421) EG:56G7.1 gene product [Drosophila melanogaster]
Length = 1795
Score = 32.5 bits (72), Expect = 5.4
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = -1
Query: 607 TALSRSPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRASGADSDK 428
T + SP + T + +TT+TPS + TTPST PS T S + + +
Sbjct: 547 TTHNTSPDTKTTIRSTTLSPKTTTTPSTTTPS----TTTPSTTTPSTTTPSTTTPSTTTP 602
Query: 427 ST 422
ST
Sbjct: 603 ST 604
>ref|NP_014653.1| induced by cold shock; Tir2p
sp|P33890|TIR2_YEAST COLD SHOCK INDUCED PROTEIN TIR2 PRECURSOR (SERINE-RICH PROTEIN 2)
pir||S61310 cold shock protein TIR2 precursor - yeast (Saccharomyces
cerevisiae)
gb|AAA92869.1| (L23521) TIR2 [Saccharomyces cerevisiae]
gb|AAC49490.1| (U43491) cold shock induced protein precursor [Saccharomyces
cerevisiae]
emb|CAA99198.1| (Z74918) ORF YOR010c [Saccharomyces cerevisiae]
Length = 251
Score = 32.1 bits (71), Expect = 7.0
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = -1
Query: 604 ALSRSPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRASGADSDKS 425
A S S T +AV S + TTS+ A SSE + A S++ S A+S A + S+ +
Sbjct: 117 ASSTEASSAATSSAVASSSETTSSAVASSSEATSSAVASSSEASSSAATSSAVASSSEAT 176
Query: 424 T 422
+
Sbjct: 177 S 177
>sp|Q01168|NUT1_MAGGR NITROGEN REGULATORY PROTEIN NUT1
gb|AAB03415.1| (U60290) nitrogen regulatory protein [Pyricularia grisea]
Length = 956
Score = 32.1 bits (71), Expect = 7.0
Identities = 22/71 (30%), Positives = 33/71 (45%), Gaps = 6/71 (8%)
Frame = +3
Query: 321 LPSCPNPKPCGPFVSEFLFEDSQNQMSSNFFPHF------VDLSLSAPDALEEAVTLGQS 482
+PS P GP+ F F S + M+SN FP + SL+ PD G +
Sbjct: 311 VPSEPMIHSAGPYQQNFSFSPSTSPMASNGFPQHMFNGQSITNSLANPDLYSPP---GSA 367
Query: 483 VEGVVALAHGSDETAEG 533
+ V+ H +E +G
Sbjct: 368 YQSQVSTPHPMNENGDG 384
>ref|NP_012456.1| Similar to plant PR-1 class of pathogen related proteins; Pry1p
sp|P47032|YJH9_YEAST HYPOTHETICAL 30.6 KD PROTEIN IN SCP160-SMC3 INTERGENIC REGION
PRECURSOR
pir||S56031 pathogenesis-related protein homolog YJL079c - yeast (Saccharomyces
cerevisiae)
emb|CAA61315.1| (X88851) hypothetical protein [Saccharomyces cerevisiae]
emb|CAA58491.1| (X83502) J1022 [Saccharomyces cerevisiae]
emb|CAA89372.1| (Z49354) ORF YJL079c [Saccharomyces cerevisiae]
Length = 299
Score = 32.1 bits (71), Expect = 7.0
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = -1
Query: 556 SRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRASGADSDKS 425
++A TTSTP+A S+ ATT ++ A+S AS +DSD S
Sbjct: 120 AQATTTSTPAAASTTSTPAATTTTS---QAAATSSASSSDSDLS 160
>ref|NP_010247.1| Ydl037cp
pir||S67570 hypothetical protein YDL037c - yeast (Saccharomyces cerevisiae)
emb|CAA96452.1| (Z71781) unknown [Saccharomyces cerevisiae]
emb|CAA98596.1| (Z74085) ORF YDL037c [Saccharomyces cerevisiae]
Length = 328
Score = 32.1 bits (71), Expect = 7.0
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = -1
Query: 607 TALSRSPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRASGADSDK 428
T S S + T ++ + + TTS+ + SS + T+ ST S T+SS S + +
Sbjct: 185 TTTSSSTTSSSTTSSSTTSSSTTSSSTTSSSTTSSSTTSSSTTSSSTTSSSTTSSSTTSS 244
Query: 427 STK 419
STK
Sbjct: 245 STK 247
>gb|AAD31493.1|AF138800_1 (AF138800) serum opacity factor precursor [Streptococcus pyogenes]
Length = 209
Score = 32.1 bits (71), Expect = 7.0
Identities = 18/59 (30%), Positives = 29/59 (48%)
Frame = -1
Query: 607 TALSRSPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRASGADSD 431
T L + S ++ T + + T+T SA ++ ATTPS + T + SGA S+
Sbjct: 4 TVLGQEVSTGVSNTEASASSTNTNTASADATASGTAATTPSAGTSTSTGEAAGSGASSE 62
>gb|AAC77825.1| (AF082300) arabinogalactan-protein [Arabidopsis thaliana]
Length = 139
Score = 32.1 bits (71), Expect = 7.0
Identities = 19/62 (30%), Positives = 28/62 (44%)
Frame = -1
Query: 610 ITALSRSPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRASGADSD 431
I A +P P T P T++P A +P+A A PS P+ + RA G +D
Sbjct: 57 IPANEPTPVPTTPPTVSPPTTSPTTSPVASPPKPYALAPGPSGPTPAPAPAPRADGPVAD 116
Query: 430 KS 425
+
Sbjct: 117 SA 118
>emb|CAA52447.1| (X74428) serine-rich protein [Saccharomyces cerevisiae]
Length = 250
Score = 32.1 bits (71), Expect = 7.0
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = -1
Query: 604 ALSRSPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRASGADSDKS 425
A S S T +AV S + TTS+ A SSE + A S++ S A+S A + S+ +
Sbjct: 116 ASSTEASSAATSSAVASSSETTSSAVASSSEATSSAVASSSEASSSAATSSAVASSSEAT 175
Query: 424 T 422
+
Sbjct: 176 S 176
>pir||T14004 trfA protein - slime mold (Dictyostelium discoideum)
dbj|BAA33143.1| (AB009080) TRFA [Dictyostelium discoideum]
Length = 1390
Score = 31.7 bits (70), Expect = 9.2
Identities = 22/63 (34%), Positives = 31/63 (48%), Gaps = 3/63 (4%)
Frame = -1
Query: 601 LSRSPSPRLTRTAVPSRARTTSTPSAVSSEPWARAT-TPSTDWPSV--TASSRASGADSD 431
++ +PS RL + PS A T STPS P + T P + + SS +S + S
Sbjct: 1265 ITSTPSKRLKPDSTPSSATTASTPSEQPESPLKKENPVGETLSPEIKDSKSSSSSSSSSS 1324
Query: 430 KSTKCG 413
ST G
Sbjct: 1325 SSTNTG 1330
>gb|AAD51697.1|AF172332_1 (AF172332) major outer envelope glycoprotein gp350 [Human
herpesvirus 4]
Length = 886
Score = 31.7 bits (70), Expect = 9.2
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = -1
Query: 607 TALSRSPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRAS 446
T + SP L +T+ P+ A TT TP+A S P TP+ P++ +S S
Sbjct: 529 TPTPNATSPTLGKTS-PTSAVTTPTPNATSPTPAVTTPTPNATIPTLGKTSPTS 581
>sp|Q07284|VGP3_EBVA8 ENVELOPE GLYCOPROTEIN GP340 (MEMBRANE ANTIGEN) (MA)
pir||S29605 glycoprotein 350/220 - human herpesvirus 4
emb|CAA47986.1| (X67776) glycoprotein 350/220 [Human herpesvirus 4]
gb|AAA02783.1| (L07922) glycoprotein 340 [Human herpesvirus 4]
gb|AAA02787.1| (L07923) glycoprotein 340 [Human herpesvirus 4]
Length = 886
Score = 31.7 bits (70), Expect = 9.2
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = -1
Query: 607 TALSRSPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRAS 446
T + SP L +T+ P+ A TT TP+A S P TP+ P++ +S S
Sbjct: 529 TPTPNATSPTLGKTS-PTSAVTTPTPNATSPTPAVTTPTPNATIPTLGKTSPTS 581
>ref|NP_012685.1| Yjr151cp
sp|P47179|YJ9P_YEAST HYPOTHETICAL 118.4 KD PROTEIN IN BAT2-DAL5 INTERGENIC REGION
PRECURSOR
pir||S57180 probable membrane protein YJR151c - yeast (Saccharomyces
cerevisiae)
emb|CAA89684.1| (Z49651) ORF YJR151c [Saccharomyces cerevisiae]
Length = 1161
Score = 31.7 bits (70), Expect = 9.2
Identities = 26/106 (24%), Positives = 39/106 (36%), Gaps = 1/106 (0%)
Frame = -1
Query: 739 TRHSKTTQNHPPKQPKWRTTAARLWTFXXXXXXXXXXXXXXXRITALSRSPSPRLTRTA- 563
T + +T + P TT+ T S +P+ T TA
Sbjct: 214 TTPTTSTTSTTPTTSTTPTTSTTSTTSQTSTKSTTPTTSSTSTTPTTSTTPTTSTTSTAP 273
Query: 562 VPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRASGADSDKST 422
S TTST S +S+ P T+ + S +ASS S + +T
Sbjct: 274 TTSTTSTTSTTSTISTAPTTSTTSSTFSTSSASASSVISTTATTSTT 320
Database: nr
Posted date: Sep 29, 2000 9:53 PM
Number of letters in database: 177,575,912
Number of sequences in database: 565,281
Lambda K H
0.318 0.135 0.00
Gapped
Lambda K H
0.270 0.0470 4.94e-324
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 250042611
Number of Sequences: 565281
Number of extensions: 5276216
Number of successful extensions: 20727
Number of sequences better than 10.0: 108
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 20452
Number of HSP's gapped (non-prelim): 258
length of query: 249
length of database: 177,575,912
effective HSP length: 54
effective length of query: 194
effective length of database: 147,050,738
effective search space: 28527843172
effective search space used: 28527843172
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 70 (31.7 bits)