Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA35061.1| (AB015207) ribosomal protein CRP7 [Neurospo... 152 2e-36
emb|CAB77635.1| (AJ390495) ribosomal protein S21 [Candida a... 137 7e-32
ref|NP_012399.1| Ribosomal protein S21B (S26B) (YS25); Rps2... 131 5e-30
ref|NP_012983.1| Ribosomal protein S21A (S26A) (YS25); Rps2... 131 5e-30
emb|CAA82137.1| (Z28283) ORF YKR057w [Saccharomyces cerevis... 124 6e-28
sp|P05764|RS21_SCHPO 40S RIBOSOMAL PROTEIN S21 (S28) >gi|82... 120 1e-26
pir||T39757 40s ribosomal protein s21 - fission yeast (Schi... 118 5e-26
emb|CAB57312.1| (AJ011718) 40S ribosomal protein S21 [Cyano... 101 5e-21
ref|NP_001015.1| ribosomal protein S21 >gi|464710|sp|P35265... 99 4e-20
sp|P05765|RS21_RAT 40S RIBOSOMAL PROTEIN S21 >gi|71045|pir|... 99 4e-20
pir||T28840 hypothetical protein F37C12.11 - Caenorhabditis... 97 1e-19
sp|P49197|RS21_CAEEL PROBABLE 40S RIBOSOMAL PROTEIN S21 97 1e-19
emb|CAA08751.1| (AJ009557) ribosomal protein S21 [Drosophil... 96 2e-19
sp|P35687|RS21_ORYSA 40S RIBOSOMAL PROTEIN S21 >gi|481227|p... 90 1e-17
pir||T02717 ribosomal protein S21 - maize >gi|1707868|emb|C... 88 7e-17
sp|Q41852|RS21_MAIZE 40S RIBOSOMAL PROTEIN S21 >gi|7440559|... 87 1e-16
emb|CAB88351.1| (AL132960) 40S ribosomal protein S21 homolo... 85 6e-16
dbj|BAA25821.1| (AB007157) ribosomal protein S21 [Homo sapi... 63 2e-09
pir||S51027 differentiation factor, 8.2K, precursor - human... 60 4e-09
emb|CAA56100.2| (X79563) 8.2 kDa differentiation factor [Ho... 59 8e-09
dbj|BAA86033.1| (AB026995) loocyte membrane protein [Xenopu... 35 0.46
gb|AAC60129.1| (U43200) antifreeze glycopeptide AFGP polypr... 35 0.46
pir||T06823 ribosomal protein S21 - garden pea >gi|3087874|... 34 0.79
gb|AAD56316.1|AC009326_3 (AC009326) hypothetical protein [A... 34 1.0
emb|CAB88499.1| (AL353817) conserved hypothetical protein [... 34 1.0
gb|AAD52672.1|AF178772_1 (AF178772) 98kDa HDM allergen [Der... 34 1.4
pir||T34369 hypothetical protein T19D12.1 - Caenorhabditis ... 34 1.4
gb|AAA21754.1| (L20249) homologous to Saccharopolyspora ery... 33 1.8
gb|AAF75679.1|AF247669_1 (AF247669) opacity factor Sof prec... 33 1.8
gb|AAC77826.1| (AF082301) arabinogalactan-protein [Arabidop... 33 1.8
emb|CAA67558.1| (X99106) gp340 [Human herpesvirus 4] 33 2.3
ref|NP_002448.1| mucin 2, intestinal/tracheal >gi|2506877|s... 33 2.3
pir||PC2022 mucin like protein Muc2 precursor - rat (fragme... 33 2.3
gb|AAA59163.1| (M94131) mucin [Homo sapiens] 33 2.3
emb|CAB06616.1| (Z84818) GP80 [Bovine herpesvirus 4] 33 2.3
pir||A43932 mucin 2 precursor, intestinal - human (fragments) 33 2.3
gb|AAA59875.1| (M74027) mucin [Homo sapiens] 33 2.3
ref|NP_010247.1| Ydl037cp >gi|2131317|pir||S67570 hypotheti... 33 2.3
dbj|BAB02066.1| (AB026647) gb|AAF02890.1~gene_id:MJL12.2~si... 32 3.0
gb|AAF58192.1| (AE003813) CG10228 gene product [Drosophila ... 32 3.0
emb|CAB52444.1| (AL109787) putative protein [Arabidopsis th... 32 3.0
emb|CAA19845.2| (AL031028) /prediction=(method:""genscan"",... 32 3.0
gb|AAC77825.1| (AF082300) arabinogalactan-protein [Arabidop... 32 4.0
sp|Q01168|NUT1_MAGGR NITROGEN REGULATORY PROTEIN NUT1 >gi|1... 32 4.0
emb|CAA52447.1| (X74428) serine-rich protein [Saccharomyces... 32 4.0
ref|NP_012456.1| Similar to plant PR-1 class of pathogen re... 32 4.0
gb|AAD31493.1|AF138800_1 (AF138800) serum opacity factor pr... 32 4.0
ref|NP_014653.1| induced by cold shock; Tir2p >gi|464887|sp... 32 4.0
gb|AAD51697.1|AF172332_1 (AF172332) major outer envelope gl... 32 5.2
sp|Q07284|VGP3_EBVA8 ENVELOPE GLYCOPROTEIN GP340 (MEMBRANE ... 32 5.2
pir||T14004 trfA protein - slime mold (Dictyostelium discoi... 32 5.2
ref|NP_050265.1| U86 >gi|5733571|gb|AAD49674.1|AF157706_95 ... 31 6.8
gb|AAF49931.1| (AE003541) CG17615 gene product [Drosophila ... 31 9.0
sp|P93329|NO20_MEDTR EARLY NODULIN 20 PRECURSOR (N-20) >gi|... 31 9.0
gb|AAD25169.1| (AF057697) serum opacity factor [Streptococc... 31 9.0
gb|AAD56420.1|AF186605_1 (AF186605) MLL2 protein [Homo sapi... 31 9.0
emb|CAB61302.1| (AL132991) putative transcriptional regulat... 31 9.0
ref|NP_055542.1| KIAA0304 gene product >gi|5123787|emb|CAB4... 31 9.0
emb|CAB97456.1| (AL389900) conserved hypothetical protein [... 31 9.0
>dbj|BAA35061.1| (AB015207) ribosomal protein CRP7 [Neurospora crassa]
Length = 87
Score = 152 bits (380), Expect = 2e-36
Identities = 74/84 (88%), Positives = 79/84 (93%)
Frame = +2
Query: 17 DRGEIVDLYVPRKCSATNRIIKAKDHGSVQISIAKVDENGRAIQGENHVYALCGFVRAMG 196
DRGEIVDLYVPRKCSAT RIIK+KDHGS QI+IAKVDENGRAIQGEN +YAL GFVRAMG
Sbjct: 4 DRGEIVDLYVPRKCSATGRIIKSKDHGSCQITIAKVDENGRAIQGENIIYALSGFVRAMG 63
Query: 197 ESDDSLNRLAQRDGLLKSVWSGQR 268
ESDDSLNRLAQRDGLLK+VW+ QR
Sbjct: 64 ESDDSLNRLAQRDGLLKAVWNPQR 87
>emb|CAB77635.1| (AJ390495) ribosomal protein S21 [Candida albicans]
Length = 87
Score = 137 bits (342), Expect = 7e-32
Identities = 66/84 (78%), Positives = 75/84 (88%)
Frame = +2
Query: 17 DRGEIVDLYVPRKCSATNRIIKAKDHGSVQISIAKVDENGRAIQGENHVYALCGFVRAMG 196
D+G++V+LYVPRKCSATNRIIKAKDH SVQISIAKVDE+GRAI GEN YAL G+VR G
Sbjct: 4 DKGQLVELYVPRKCSATNRIIKAKDHASVQISIAKVDEDGRAIAGENITYALSGYVRGRG 63
Query: 197 ESDDSLNRLAQRDGLLKSVWSGQR 268
E+DDSLNRLAQ+DGLLK+VWS R
Sbjct: 64 EADDSLNRLAQQDGLLKNVWSYSR 87
>ref|NP_012399.1| Ribosomal protein S21B (S26B) (YS25); Rps21bp
pir||S56918 ribosomal protein S21.e.B, cytosolic - yeast (Saccharomyces
cerevisiae)
emb|CAA60819.1| (X87371) homologous to ORF YKR057w; ORF19 [Saccharomyces
cerevisiae]
emb|CAA89431.1| (Z49411) ORF YJL136c [Saccharomyces cerevisiae]
Length = 87
Score = 131 bits (326), Expect = 5e-30
Identities = 63/84 (75%), Positives = 72/84 (85%)
Frame = +2
Query: 17 DRGEIVDLYVPRKCSATNRIIKAKDHGSVQISIAKVDENGRAIQGENHVYALCGFVRAMG 196
D+G++V+LYVPRKCSATNRIIKA DH SVQI++AKVDE GRAI GE YAL G+VR+ G
Sbjct: 4 DKGQLVELYVPRKCSATNRIIKADDHASVQINVAKVDEEGRAIPGEYITYALSGYVRSRG 63
Query: 197 ESDDSLNRLAQRDGLLKSVWSGQR 268
ESDDSLNRLAQ DGLLK+VWS R
Sbjct: 64 ESDDSLNRLAQNDGLLKNVWSYSR 87
>ref|NP_012983.1| Ribosomal protein S21A (S26A) (YS25); Rps21ap
sp|P05760|RS21_YEAST 40S RIBOSOMAL PROTEIN S21 (S26) (YS25)
pir||R3BY1E ribosomal protein S21.e.A, cytosolic - yeast (Saccharomyces
cerevisiae)
emb|CAA30671.1| (X07811) YS25 protein [Saccharomyces cerevisiae]
emb|CAA82135.1| (Z28282) ORF YKR057w [Saccharomyces cerevisiae]
Length = 87
Score = 131 bits (326), Expect = 5e-30
Identities = 63/84 (75%), Positives = 72/84 (85%)
Frame = +2
Query: 17 DRGEIVDLYVPRKCSATNRIIKAKDHGSVQISIAKVDENGRAIQGENHVYALCGFVRAMG 196
D+G++V+LYVPRKCSATNRIIKA DH SVQI++AKVDE GRAI GE YAL G+VR+ G
Sbjct: 4 DKGQLVELYVPRKCSATNRIIKADDHASVQINVAKVDEEGRAIPGEYVTYALSGYVRSRG 63
Query: 197 ESDDSLNRLAQRDGLLKSVWSGQR 268
ESDDSLNRLAQ DGLLK+VWS R
Sbjct: 64 ESDDSLNRLAQNDGLLKNVWSYSR 87
>emb|CAA82137.1| (Z28283) ORF YKR057w [Saccharomyces cerevisiae]
Length = 79
Score = 124 bits (308), Expect = 6e-28
Identities = 61/79 (77%), Positives = 67/79 (84%)
Frame = +2
Query: 32 VDLYVPRKCSATNRIIKAKDHGSVQISIAKVDENGRAIQGENHVYALCGFVRAMGESDDS 211
V+LYVPRKCSATNRIIKA DH SVQI++AKVDE GRAI GE YAL G+VR+ GESDDS
Sbjct: 1 VELYVPRKCSATNRIIKADDHASVQINVAKVDEEGRAIPGEYVTYALSGYVRSRGESDDS 60
Query: 212 LNRLAQRDGLLKSVWSGQR 268
LNRLAQ DGLLK+VWS R
Sbjct: 61 LNRLAQNDGLLKNVWSYSR 79
>sp|P05764|RS21_SCHPO 40S RIBOSOMAL PROTEIN S21 (S28)
pir||B23862 ribosomal protein S21.e - fission yeast (Schizosaccharomyces pombe)
Length = 87
Score = 120 bits (297), Expect = 1e-26
Identities = 56/84 (66%), Positives = 67/84 (79%)
Frame = +2
Query: 17 DRGEIVDLYVPRKCSATNRIIKAKDHGSVQISIAKVDENGRAIQGENHVYALCGFVRAMG 196
+ G++VDLYVPRKCSATNRII+AKDH SVQI++A VD+ GR I GE YA+ GFVR+ G
Sbjct: 4 EAGQLVDLYVPRKCSATNRIIQAKDHASVQINVAAVDQEGRQIPGEKTTYAISGFVRSKG 63
Query: 197 ESDDSLNRLAQRDGLLKSVWSGQR 268
ESDD +NRL +DGLL VWS QR
Sbjct: 64 ESDDDINRLQTQDGLLTGVWSYQR 87
>pir||T39757 40s ribosomal protein s21 - fission yeast (Schizosaccharomyces
pombe)
emb|CAA22666.1| (AL035077) 40s ribosomal protein s21 [Schizosaccharomyces pombe]
Length = 87
Score = 118 bits (292), Expect = 5e-26
Identities = 55/84 (65%), Positives = 66/84 (78%)
Frame = +2
Query: 17 DRGEIVDLYVPRKCSATNRIIKAKDHGSVQISIAKVDENGRAIQGENHVYALCGFVRAMG 196
+ G++VDLYVPRKCSATNRII+AKDH SVQI++ VD GR I GE YA+ GFVR+ G
Sbjct: 4 EAGQLVDLYVPRKCSATNRIIQAKDHASVQINVCAVDAEGRQIPGEKTTYAISGFVRSKG 63
Query: 197 ESDDSLNRLAQRDGLLKSVWSGQR 268
ESDD +NRL +DGLL+ VWS QR
Sbjct: 64 ESDDCINRLTTQDGLLEGVWSYQR 87
>emb|CAB57312.1| (AJ011718) 40S ribosomal protein S21 [Cyanophora paradoxa]
Length = 82
Score = 101 bits (249), Expect = 5e-21
Identities = 46/81 (56%), Positives = 60/81 (73%)
Frame = +2
Query: 11 RGDRGEIVDLYVPRKCSATNRIIKAKDHGSVQISIAKVDENGRAIQGENHVYALCGFVRA 190
+ D G+IVDLY+PRKCSATNR+I A DH +VQI++ VD N G+ +ALCGFVR+
Sbjct: 2 QNDEGKIVDLYIPRKCSATNRLISATDHAAVQINVGHVDPNSGLYTGDYTTFALCGFVRS 61
Query: 191 MGESDDSLNRLAQRDGLLKSV 253
MGESD +LNRL + GL K++
Sbjct: 62 MGESDAALNRLCVKHGLAKAI 82
>ref|NP_001015.1| ribosomal protein S21
sp|P35265|RS21_HUMAN 40S RIBOSOMAL PROTEIN S21
pir||S34108 ribosomal protein S21, cytosolic - human
gb|AAA99893.1| (L04483) ribosomal protein S21 [Homo sapiens]
emb|CAB83213.1| (AJ250907) ribosomal protein S21 [Homo sapiens]
Length = 83
Score = 98.7 bits (242), Expect = 4e-20
Identities = 45/78 (57%), Positives = 60/78 (76%)
Frame = +2
Query: 11 RGDRGEIVDLYVPRKCSATNRIIKAKDHGSVQISIAKVDENGRAIQGENHVYALCGFVRA 190
+ D GE VDLYVPRKCSA+NRII AKDH S+Q+++A+VD+ G+ YA+CG +R
Sbjct: 2 QNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIRR 61
Query: 191 MGESDDSLNRLAQRDGLL 244
MGESDDS+ RLA+ DG++
Sbjct: 62 MGESDDSILRLAKADGIV 79
>sp|P05765|RS21_RAT 40S RIBOSOMAL PROTEIN S21
pir||R3RT21 ribosomal protein S21 - rat
emb|CAA55658.1| (X79059) ribosomal protein S21 [Rattus norvegicus]
Length = 83
Score = 98.7 bits (242), Expect = 4e-20
Identities = 44/78 (56%), Positives = 59/78 (75%)
Frame = +2
Query: 11 RGDRGEIVDLYVPRKCSATNRIIKAKDHGSVQISIAKVDENGRAIQGENHVYALCGFVRA 190
+ D GE VDLYVPRKCSA+NRII AKDH S+Q+++A+VD + G+ Y +CG +R
Sbjct: 2 QNDAGEFVDLYVPRKCSASNRIIAAKDHASIQMNVAEVDRSTGRFNGQFKTYGICGAIRR 61
Query: 191 MGESDDSLNRLAQRDGLL 244
MGESDDS+ RLA+ DG++
Sbjct: 62 MGESDDSILRLAKADGIV 79
>pir||T28840 hypothetical protein F37C12.11 - Caenorhabditis elegans
gb|AAC48297.1| (U00033) similar to ribosomal protein S21 [Caenorhabditis elegans]
Length = 151
Score = 97.1 bits (238), Expect = 1e-19
Identities = 47/78 (60%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
Frame = +2
Query: 11 RGDRGEIVDLYVPRKCSATNRIIKAKDHGSVQISIAKVD-ENGRAIQGENHVYALCGFVR 187
+ D G+ V+LYVPRKCS++NRII KDH SVQI VD E GR I G++ YA+CG +R
Sbjct: 65 QNDAGQTVELYVPRKCSSSNRIIGPKDHASVQIDFVDVDPETGRMIPGKSTRYAICGAIR 124
Query: 188 AMGESDDSLNRLAQRDGLL 244
MGESDD++ RLAQ+DGL+
Sbjct: 125 RMGESDDAILRLAQKDGLV 143
>sp|P49197|RS21_CAEEL PROBABLE 40S RIBOSOMAL PROTEIN S21
Length = 88
Score = 97.1 bits (238), Expect = 1e-19
Identities = 47/78 (60%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
Frame = +2
Query: 11 RGDRGEIVDLYVPRKCSATNRIIKAKDHGSVQISIAKVD-ENGRAIQGENHVYALCGFVR 187
+ D G+ V+LYVPRKCS++NRII KDH SVQI VD E GR I G++ YA+CG +R
Sbjct: 2 QNDAGQTVELYVPRKCSSSNRIIGPKDHASVQIDFVDVDPETGRMIPGKSTRYAICGAIR 61
Query: 188 AMGESDDSLNRLAQRDGLL 244
MGESDD++ RLAQ+DGL+
Sbjct: 62 RMGESDDAILRLAQKDGLV 80
>emb|CAA08751.1| (AJ009557) ribosomal protein S21 [Drosophila melanogaster]
gb|AAF51191.1| (AE003581) oho23B gene product [Drosophila melanogaster]
Length = 83
Score = 96.3 bits (236), Expect = 2e-19
Identities = 49/76 (64%), Positives = 59/76 (77%), Gaps = 1/76 (1%)
Frame = +2
Query: 17 DRGEIVDLYVPRKCSATNRIIKAKDHGSVQISIAKVD-ENGRAIQGENHVYALCGFVRAM 193
D GE VDLYVPRKCSA+NRII AKDH SVQ+SI VD E GR G + YA+CG +R M
Sbjct: 4 DAGENVDLYVPRKCSASNRIIHAKDHASVQLSIVDVDPETGRQTDG-SKTYAICGEIRRM 62
Query: 194 GESDDSLNRLAQRDGLL 244
GESDD + RLA++DG++
Sbjct: 63 GESDDCIVRLAKKDGII 79
>sp|P35687|RS21_ORYSA 40S RIBOSOMAL PROTEIN S21
pir||S38357 ribosomal protein S21, cytosolic - rice
dbj|BAA02158.1| (D12633) 40S subunit ribosomal protein [Oryza sativa]
Length = 82
Score = 90.1 bits (220), Expect = 1e-17
Identities = 44/74 (59%), Positives = 56/74 (75%)
Frame = +2
Query: 11 RGDRGEIVDLYVPRKCSATNRIIKAKDHGSVQISIAKVDENGRAIQGENHVYALCGFVRA 190
+ + G++VDLYVPRKCSATNRII AKDH SVQI+I VDENG G +AL GF+RA
Sbjct: 2 QNEEGQMVDLYVPRKCSATNRIITAKDHASVQINIGHVDENG-LYDGRFTTFALSGFIRA 60
Query: 191 MGESDDSLNRLAQR 232
G++D +L+RL Q+
Sbjct: 61 QGDADSALDRLWQK 74
>pir||T02717 ribosomal protein S21 - maize
emb|CAA70852.1| (Y09636) 40S ribosomal subunit protein S21 [Zea mays]
Length = 81
Score = 87.8 bits (214), Expect = 7e-17
Identities = 44/74 (59%), Positives = 54/74 (72%)
Frame = +2
Query: 11 RGDRGEIVDLYVPRKCSATNRIIKAKDHGSVQISIAKVDENGRAIQGENHVYALCGFVRA 190
+ + G+ VDLYVPRKCSATNRII AKDH SVQI+I +D NG G +AL GFVRA
Sbjct: 2 QNEEGKTVDLYVPRKCSATNRIITAKDHASVQINIGHLDANG-LYDGHFTTFALSGFVRA 60
Query: 191 MGESDDSLNRLAQR 232
G++D SL+RL Q+
Sbjct: 61 QGDADSSLDRLRQK 74
>sp|Q41852|RS21_MAIZE 40S RIBOSOMAL PROTEIN S21
pir||T03945 ribosomal protein S21 - maize
emb|CAA67225.1| (X98656) ribosomal protein S21 [Zea mays]
Length = 81
Score = 87.0 bits (212), Expect = 1e-16
Identities = 44/74 (59%), Positives = 54/74 (72%)
Frame = +2
Query: 11 RGDRGEIVDLYVPRKCSATNRIIKAKDHGSVQISIAKVDENGRAIQGENHVYALCGFVRA 190
+ + G+ VDLYVPRKCSATNRII AKDH SVQI+I +D NG G +AL GFVRA
Sbjct: 2 QNEEGKTVDLYVPRKCSATNRIITAKDHASVQINIGHLDANG-LYDGHFTTFALSGFVRA 60
Query: 191 MGESDDSLNRLAQR 232
G++D SL+RL Q+
Sbjct: 61 QGDADSSLDRLWQK 74
>emb|CAB88351.1| (AL132960) 40S ribosomal protein S21 homolog [Arabidopsis thaliana]
Length = 82
Score = 84.7 bits (206), Expect = 6e-16
Identities = 38/72 (52%), Positives = 54/72 (74%)
Frame = +2
Query: 17 DRGEIVDLYVPRKCSATNRIIKAKDHGSVQISIAKVDENGRAIQGENHVYALCGFVRAMG 196
D G++ +LY+PRKCSATNR+I +KDH SVQ++I +D NG G+ +ALCGFVRA G
Sbjct: 4 DAGQVTELYIPRKCSATNRMITSKDHASVQLNIGHLDANG-LYTGQFTTFALCGFVRAQG 62
Query: 197 ESDDSLNRLAQR 232
++D ++RL Q+
Sbjct: 63 DADSGVDRLWQK 74
>dbj|BAA25821.1| (AB007157) ribosomal protein S21 [Homo sapiens]
Length = 54
Score = 63.2 bits (151), Expect = 2e-09
Identities = 29/54 (53%), Positives = 40/54 (73%)
Frame = +2
Query: 68 NRIIKAKDHGSVQISIAKVDENGRAIQGENHVYALCGFVRAMGESDDSLNRLAQ 229
NRII AKDH S+Q+++A+VD+ G+ YA+CG +R MGESDDS+ RLA+
Sbjct: 1 NRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGESDDSILRLAK 54
>pir||S51027 differentiation factor, 8.2K, precursor - human
prf||2102276A 8.2kD differentiation factor [Homo sapiens]
Length = 97
Score = 59.7 bits (142), Expect(2) = 4e-09
Identities = 26/45 (57%), Positives = 35/45 (77%)
Frame = +2
Query: 11 RGDRGEIVDLYVPRKCSATNRIIKAKDHGSVQISIAKVDENGRAI 145
+ D GE VDLYVPRKCSA+NRII AKDH S+Q+++A++ + I
Sbjct: 2 QNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVARLTRSQAGI 46
Score = 22.3 bits (46), Expect(2) = 4e-09
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = +3
Query: 120 RLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWP 227
RLTR+ A SA W P +DWP
Sbjct: 38 RLTRSQAGIMASLLKMLSAGPFVGWVSQMIPFSDWP 73
>emb|CAA56100.2| (X79563) 8.2 kDa differentiation factor [Homo sapiens]
Length = 97
Score = 59.3 bits (141), Expect(2) = 8e-09
Identities = 25/38 (65%), Positives = 33/38 (86%)
Frame = +2
Query: 11 RGDRGEIVDLYVPRKCSATNRIIKAKDHGSVQISIAKV 124
+ D GE VDLYVPRKCSA+NRII AKDH S+Q+++A++
Sbjct: 2 QNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVARL 39
Score = 21.6 bits (44), Expect(2) = 8e-09
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = +3
Query: 120 RLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWP 227
RLTR+ A SA W P +DWP
Sbjct: 38 RLTRSQAGLMASLKLMLSAGPFVGWVSQMIPFSDWP 73
>dbj|BAA86033.1| (AB026995) loocyte membrane protein [Xenopus laevis]
Length = 404
Score = 35.2 bits (79), Expect = 0.46
Identities = 24/55 (43%), Positives = 33/55 (59%)
Frame = +3
Query: 102 SRSPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRASGADS 266
SRS S +T ++ S RTTS P A ++ P ATTPS P+V+++ AS A S
Sbjct: 208 SRSQSAAVTPSSTTSSTRTTSAPVAPAAAP---ATTPS---PAVSSNDGASEATS 256
>gb|AAC60129.1| (U43200) antifreeze glycopeptide AFGP polyprotein precursor
[Boreogadus saida]
Length = 507
Score = 35.2 bits (79), Expect = 0.46
Identities = 26/82 (31%), Positives = 37/82 (44%), Gaps = 7/82 (8%)
Frame = +3
Query: 15 ATAARLWTFXXXXXXXXXXXXXXXXITALSRSPSPRLTRTAVPSRARTTSTPS------- 173
ATAA T TA + + R R A P+ A T +T +
Sbjct: 62 ATAATPATAATPATAATAATTAATAATAATAATPARAARAATPATAATPATAATAATAAT 121
Query: 174 AVSSEPWARATTPSTDWPSVTASSRASGA 260
A ++E ARA TP+T TA++ A+ A
Sbjct: 122 AATAETPARAATPATAATPATAATPATAA 150
Score = 33.2 bits (74), Expect = 1.8
Identities = 19/56 (33%), Positives = 31/56 (54%)
Frame = +3
Query: 93 TALSRSPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRASGA 260
TA + + + R A P+ A T +TP+ + ARA TP+T + TA++ A+ A
Sbjct: 154 TAATSATAATAARAATPATAATPATPATAARA--ARAATPATAATAATAATAATAA 207
Score = 30.9 bits (68), Expect = 9.0
Identities = 20/80 (25%), Positives = 33/80 (41%)
Frame = +3
Query: 15 ATAARLWTFXXXXXXXXXXXXXXXXITALSRSPSPRLTRTAVPSRARTTSTPSAVSSEPW 194
ATAA T A + +P+ T P+ + +A ++
Sbjct: 426 ATAATAATAATAATAATAATAPTPARAARAATPATGATPATAPTAGTAATAATAATAATP 485
Query: 195 ARATTPSTDWPSVTASSRAS 254
ARA+TP+T VTA++ A+
Sbjct: 486 ARASTPATAATPVTAATPAA 505
Score = 30.9 bits (68), Expect = 9.0
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Frame = +3
Query: 15 ATAARLWTFXXXXXXXXXXXXXXXXITALSRSPS--PRLTRTAVPSRARTTST-PSAVSS 185
ATAA T A + +P+ P A P+ A T +T P+A +
Sbjct: 195 ATAATAATAATAATAATAATAATPARAARAATPATAPTPATAATPATAATAATAPTAATP 254
Query: 186 EPWARATTPSTDWPSVTASSRASGA 260
ARA TP+T TA++ A+ A
Sbjct: 255 ARAARAATPATAATLATAATPATPA 279
>pir||T06823 ribosomal protein S21 - garden pea
emb|CAA76644.1| (Y17134) ribosomal protein S21 [Pisum sativum]
Length = 94
Score = 34.4 bits (77), Expect = 0.79
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +2
Query: 92 HGSVQISIAKVDENGRAIQGENHVYALCGFVRA 190
H SVQI++ +DE+G G +ALCGF RA
Sbjct: 21 HASVQINVGHLDESG-VYNGHFSTFALCGFTRA 52
>gb|AAD56316.1|AC009326_3 (AC009326) hypothetical protein [Arabidopsis thaliana]
gb|AAF07827.1|AC010871_3 (AC010871) hypothetical protein [Arabidopsis thaliana]
Length = 541
Score = 34.0 bits (76), Expect = 1.0
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Frame = +3
Query: 6 RHEATAARLWTFXXXXXXXXXXXXXXXXITALSRSPSPR-------LTRTAVPSRARTTS 164
R TAAR T T +P P ++R A P+R +T
Sbjct: 192 RATLTAARATTSTAAPRTTTTSSGSARSATPTRSNPRPSSASSKKPVSRPATPTRRPSTP 251
Query: 165 T-PSAVSSEPWARATTPSTDWPSVTASSRASGADSDKS 275
T PS VSS+ +R T+PS P+V + S+A + S
Sbjct: 252 TGPSIVSSKAPSRGTSPS---PTVNSLSKAPSRGTSPS 286
>emb|CAB88499.1| (AL353817) conserved hypothetical protein [Neurospora crassa]
Length = 440
Score = 34.0 bits (76), Expect = 1.0
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 114 SPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRA 251
SP T T P R TT P PWA+ ++DW + + + RA
Sbjct: 80 SPTFTPTPTPWRPTTTRLPPITGPPPWAQQRRSASDWWNRSFNERA 125
>gb|AAD52672.1|AF178772_1 (AF178772) 98kDa HDM allergen [Dermatophagoides farinae]
Length = 555
Score = 33.6 bits (75), Expect = 1.4
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +3
Query: 93 TALSRSPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRAS 254
T + +PSP T T PS T+TPS + P P+T PS T + S
Sbjct: 439 TTPTTTPSPT-TPTTTPSPTTPTTTPSPTTPTPTTPTPAPTTSTPSPTTTEHTS 491
>pir||T34369 hypothetical protein T19D12.1 - Caenorhabditis elegans
gb|AAC24428.1| (U41263) similar to A. faecalis poly(3-hydroxybutyrate)
depolymerase (SP:PHB_ALCFA, P12625); similar to zinc
finger protein 40 (SP:ZEP1_HUMAN, P15822)
[Caenorhabditis elegans]
Length = 1777
Score = 33.6 bits (75), Expect = 1.4
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +3
Query: 102 SRSPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRASGADSDKS 275
S S S +T T PS T P++ S++P + P+T +VTAS +GA S S
Sbjct: 472 SGSSSTVVTSTITPS---TQGVPTSTSNQPTPSTSNPTTPKSTVTASPSTTGATSTAS 526
Score = 31.3 bits (69), Expect = 6.8
Identities = 28/86 (32%), Positives = 40/86 (45%), Gaps = 5/86 (5%)
Frame = +3
Query: 93 TALSRSPSPRLTRTAVPSRARTTSTPSAV---SSEPWARATTPSTDWPSVTAS--SRASG 257
TA S SP P ++ T+VPS TS+ S+ SS A T+ S+ T S S +
Sbjct: 1502 TAGSSSPQPTVSSTSVPSSTGATSSGSSTTVGSSTVGATQTSVSSSTVPNTGSTGSTVTN 1561
Query: 258 ADSDKSTKCGKKLLDIWF*ESSKRNSDTNGP 350
+ ST I ++ S T+GP
Sbjct: 1562 PSTSSSTSGSSSTQSIPSSTAANTGSSTSGP 1592
Score = 30.9 bits (68), Expect = 9.0
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = +3
Query: 90 ITALSRSPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPS--TDWPSVTASSRASG 257
+ A + +PS T V + T+T + + WA TT S T P VT S+ G
Sbjct: 263 LAATTTAPSTNTTTQGVTTTVGKTTTVTTAQNSTWAATTTASNTTTQPVVTTSTSTQG 320
>gb|AAA21754.1| (L20249) homologous to Saccharopolyspora erythraea beta-ketoacyl
synthase [Streptomyces coriofaciens]
Length = 527
Score = 33.2 bits (74), Expect = 1.8
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +3
Query: 105 RSPSPRLTRTAVPS--RARTTSTPSAVSSEPWARATTPSTDWPSVTASSRASGADSDKST 278
R+ P R+A PS R+R S+ SA S PW S P+ A S + ST
Sbjct: 390 RTQDPAACRSATPSTPRSRNRSSSSARSPAPWRTPNRASPSSPTSPAPSPRPVSSPIPST 449
Query: 279 KCG 287
CG
Sbjct: 450 GCG 452
>gb|AAF75679.1|AF247669_1 (AF247669) opacity factor Sof precursor [Streptococcus pyogenes]
Length = 207
Score = 33.2 bits (74), Expect = 1.8
Identities = 24/81 (29%), Positives = 41/81 (49%), Gaps = 3/81 (3%)
Frame = +3
Query: 114 SPRLTRTAVPSRARTTSTPSAVSSE---PWARATTPSTDWPSVTASSRASGADSDKSTKC 284
+P+L P+ T+S S SSE P A +TT S S T +S ++G++ T+
Sbjct: 70 TPQLQTQTPPAATSTSSASSTSSSEDKAPKAASTTSS----SATVASPSNGSNQGAGTEA 125
Query: 285 GKKLLDIWF*ESSKRNSDTNGPQG 356
+++D+ K +S+ N G
Sbjct: 126 APQMMDVEKYTVDKESSELNIKDG 149
>gb|AAC77826.1| (AF082301) arabinogalactan-protein [Arabidopsis thaliana]
gb|AAD38870.1|AF060874_1 (AF060874) AtAGP4 [Arabidopsis thaliana]
emb|CAB89400.1| (AL353995) AtAGP4 [Arabidopsis thaliana]
Length = 135
Score = 33.2 bits (74), Expect = 1.8
Identities = 16/48 (33%), Positives = 27/48 (55%)
Frame = +3
Query: 93 TALSRSPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVT 236
+AL+++P+P T T P+ +TP V++ P A P+T P+ T
Sbjct: 18 SALAQAPAPTPTATPPPATPPPVATPPPVATPPPAATPAPATPPPAAT 65
>emb|CAA67558.1| (X99106) gp340 [Human herpesvirus 4]
Length = 856
Score = 32.8 bits (73), Expect = 2.3
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +3
Query: 93 TALSRSPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRASGA 260
T + SP L +T+ P+ A TT TP+A S P TP+ P+V +S + A
Sbjct: 529 TPTPNATSPTLGKTS-PTSAVTTPTPNATSPTPAVTTPTPNATSPTVGETSPQANA 583
>ref|NP_002448.1| mucin 2, intestinal/tracheal
sp|Q02817|MUC2_HUMAN MUCIN 2 PRECURSOR (INTESTINAL MUCIN 2)
gb|AAB95295.1| (L21998) mucin [Homo sapiens]
Length = 5179
Score = 32.8 bits (73), Expect = 2.3
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +3
Query: 108 SPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRASGADSDKST 278
+PSP +T T P T S+P +++ P TT +T P+ T SS + + ST
Sbjct: 1664 TPSPPITTTTTPPPTTTPSSP--ITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSST 1718
>pir||PC2022 mucin like protein Muc2 precursor - rat (fragment)
emb|CAA82313.1| (Z29072) mucin [Rattus norvegicus]
Length = 235
Score = 32.8 bits (73), Expect = 2.3
Identities = 21/62 (33%), Positives = 33/62 (52%), Gaps = 3/62 (4%)
Frame = +3
Query: 93 TALSRSPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPS---TDWPSVTASSRASGAD 263
T + S +P +T T+ P R+ TT TPS VS+ TTP+ T P+ T + ++
Sbjct: 159 TTQTTSATPIVTETSTP-RSTTTQTPSTVSTTTGTPTTTPTIGKTTTPTSTVTETSTPTS 217
Query: 264 SDKST 278
+ T
Sbjct: 218 TTTQT 222
>gb|AAA59163.1| (M94131) mucin [Homo sapiens]
Length = 1270
Score = 32.8 bits (73), Expect = 2.3
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +3
Query: 108 SPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRASGADSDKST 278
+PSP +T T P T S+P +++ P TT +T P+ T SS + + ST
Sbjct: 1039 TPSPPITTTTTPPPTTTPSSP--ITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSST 1093
>emb|CAB06616.1| (Z84818) GP80 [Bovine herpesvirus 4]
Length = 273
Score = 32.8 bits (73), Expect = 2.3
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +3
Query: 93 TALSRSPSPR---LTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRASGAD 263
T+ SPSP + TA S + TSTP+A ++ + +T +T S T SS AS +
Sbjct: 59 TSSVSSPSPSSSSVPSTATSSSSSPTSTPTATTTTATSSTSTNTTSSVSTTVSSTASQST 118
Query: 264 SDKST 278
+ ST
Sbjct: 119 TLTST 123
>pir||A43932 mucin 2 precursor, intestinal - human (fragments)
Length = 3020
Score = 32.8 bits (73), Expect = 2.3
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +3
Query: 108 SPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRASGADSDKST 278
+PSP +T T P T S+P +++ P TT +T P+ T SS + + ST
Sbjct: 1664 TPSPPITTTTTPPPTTTPSSP--ITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSST 1718
>gb|AAA59875.1| (M74027) mucin [Homo sapiens]
Length = 573
Score = 32.8 bits (73), Expect = 2.3
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +3
Query: 108 SPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRASGADSDKST 278
+PSP +T T P T S+P +++ P TT +T P+ T SS + + ST
Sbjct: 322 TPSPPITTTTTPPPTTTPSSP--ITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSST 376
>ref|NP_010247.1| Ydl037cp
pir||S67570 hypothetical protein YDL037c - yeast (Saccharomyces cerevisiae)
emb|CAA96452.1| (Z71781) unknown [Saccharomyces cerevisiae]
emb|CAA98596.1| (Z74085) ORF YDL037c [Saccharomyces cerevisiae]
Length = 328
Score = 32.8 bits (73), Expect = 2.3
Identities = 23/90 (25%), Positives = 39/90 (42%)
Frame = +3
Query: 12 EATAARLWTFXXXXXXXXXXXXXXXXITALSRSPSPRLTRTAVPSRARTTSTPSAVSSEP 191
+A+++ + T T S + S T ++ S + TTS+ + SS
Sbjct: 159 KASSSSITTSSITTSSTTTSSTTTSSTTTSSSTTSSSTTSSSTTSSS-TTSSSTTSSSTT 217
Query: 192 WARATTPSTDWPSVTASSRASGADSDKSTK 281
+ T+ ST S T+SS S + + STK
Sbjct: 218 SSSTTSSSTTSSSTTSSSTTSSSTTSSSTK 247
>dbj|BAB02066.1| (AB026647) gb|AAF02890.1~gene_id:MJL12.2~similar to unknown protein
[Arabidopsis thaliana]
Length = 242
Score = 32.5 bits (72), Expect = 3.0
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = -2
Query: 379 LPSCPNPKPCGPFVSEFLFEDSQNQMSSNFFPHFVDLSLSAPDALEEAVTLGQSVEGVVA 200
LP CP P PF +L +DS+ Q ++++ +++L+++ D EA G S +V
Sbjct: 123 LPECP---PENPFEIYYLMKDSELQENNDWIRLYLELAVATTDRNREASDFGLSNLEIVN 179
Query: 199 LA 194
+A
Sbjct: 180 VA 181
>gb|AAF58192.1| (AE003813) CG10228 gene product [Drosophila melanogaster]
Length = 1945
Score = 32.5 bits (72), Expect = 3.0
Identities = 24/80 (30%), Positives = 38/80 (47%)
Frame = +3
Query: 102 SRSPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRASGADSDKSTK 281
S S S +R S++ TTS+ S+ S T S++ P+V S + + DSD+ +
Sbjct: 363 SSSHSSSSSRKRSESKSSTTSSSSSSSDVRHKGVTASSSNQPTVKRSGKITSKDSDRYVR 422
Query: 282 CGKKLLDIWF*ESSKRNSDT 341
G L S+KR S +
Sbjct: 423 NGSPL------GSAKRKSSS 436
>emb|CAB52444.1| (AL109787) putative protein [Arabidopsis thaliana]
emb|CAB79789.1| (AL161577) putative protein [Arabidopsis thaliana]
Length = 644
Score = 32.5 bits (72), Expect = 3.0
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +3
Query: 93 TALSRSPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPS 230
T R PSP +TR V S +++ + AVS+E +T PS PS
Sbjct: 42 TKNGRCPSPSVTRPTVSSSSQSVAAKRAVSAERKRPSTPPSPTSPS 87
>emb|CAA19845.2| (AL031028) /prediction=(method:""genscan"", version:""1.0"",
score:""477.26"")~/prediction=(method:""genefinder"",
version:""084"") [Drosophila melanogaster]
gb|AAF45644.1| (AE003421) EG:56G7.1 gene product [Drosophila melanogaster]
Length = 1795
Score = 32.5 bits (72), Expect = 3.0
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = +3
Query: 93 TALSRSPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRASGADSDK 272
T + SP + T + +TT+TPS + TTPST PS T S + + +
Sbjct: 547 TTHNTSPDTKTTIRSTTLSPKTTTTPSTTTPS----TTTPSTTTPSTTTPSTTTPSTTTP 602
Query: 273 ST 278
ST
Sbjct: 603 ST 604
Score = 31.3 bits (69), Expect = 6.8
Identities = 18/54 (33%), Positives = 25/54 (45%)
Frame = +3
Query: 93 TALSRSPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRAS 254
T S + SP+ T T + TT+ + S TTPST PS T + + S
Sbjct: 558 TIRSTTLSPKTTTTPSTTTPSTTTPSTTTPSTTTPSTTTPSTTTPSTTTTVKVS 611
>gb|AAC77825.1| (AF082300) arabinogalactan-protein [Arabidopsis thaliana]
Length = 139
Score = 32.1 bits (71), Expect = 4.0
Identities = 19/62 (30%), Positives = 28/62 (44%)
Frame = +3
Query: 90 ITALSRSPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRASGADSD 269
I A +P P T P T++P A +P+A A PS P+ + RA G +D
Sbjct: 57 IPANEPTPVPTTPPTVSPPTTSPTTSPVASPPKPYALAPGPSGPTPAPAPAPRADGPVAD 116
Query: 270 KS 275
+
Sbjct: 117 SA 118
>sp|Q01168|NUT1_MAGGR NITROGEN REGULATORY PROTEIN NUT1
gb|AAB03415.1| (U60290) nitrogen regulatory protein [Pyricularia grisea]
Length = 956
Score = 32.1 bits (71), Expect = 4.0
Identities = 22/71 (30%), Positives = 33/71 (45%), Gaps = 6/71 (8%)
Frame = -2
Query: 379 LPSCPNPKPCGPFVSEFLFEDSQNQMSSNFFPHF------VDLSLSAPDALEEAVTLGQS 218
+PS P GP+ F F S + M+SN FP + SL+ PD G +
Sbjct: 311 VPSEPMIHSAGPYQQNFSFSPSTSPMASNGFPQHMFNGQSITNSLANPDLYSPP---GSA 367
Query: 217 VEGVVALAHGSDETAEG 167
+ V+ H +E +G
Sbjct: 368 YQSQVSTPHPMNENGDG 384
>emb|CAA52447.1| (X74428) serine-rich protein [Saccharomyces cerevisiae]
Length = 250
Score = 32.1 bits (71), Expect = 4.0
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +3
Query: 96 ALSRSPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRASGADSDKS 275
A S S T +AV S + TTS+ A SSE + A S++ S A+S A + S+ +
Sbjct: 116 ASSTEASSAATSSAVASSSETTSSAVASSSEATSSAVASSSEASSSAATSSAVASSSEAT 175
Query: 276 T 278
+
Sbjct: 176 S 176
>ref|NP_012456.1| Similar to plant PR-1 class of pathogen related proteins; Pry1p
sp|P47032|YJH9_YEAST HYPOTHETICAL 30.6 KD PROTEIN IN SCP160-SMC3 INTERGENIC REGION
PRECURSOR
pir||S56031 pathogenesis-related protein homolog YJL079c - yeast (Saccharomyces
cerevisiae)
emb|CAA61315.1| (X88851) hypothetical protein [Saccharomyces cerevisiae]
emb|CAA58491.1| (X83502) J1022 [Saccharomyces cerevisiae]
emb|CAA89372.1| (Z49354) ORF YJL079c [Saccharomyces cerevisiae]
Length = 299
Score = 32.1 bits (71), Expect = 4.0
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = +3
Query: 144 SRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRASGADSDKS 275
++A TTSTP+A S+ ATT ++ A+S AS +DSD S
Sbjct: 120 AQATTTSTPAAASTTSTPAATTTTS---QAAATSSASSSDSDLS 160
>gb|AAD31493.1|AF138800_1 (AF138800) serum opacity factor precursor [Streptococcus pyogenes]
Length = 209
Score = 32.1 bits (71), Expect = 4.0
Identities = 18/59 (30%), Positives = 29/59 (48%)
Frame = +3
Query: 93 TALSRSPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRASGADSD 269
T L + S ++ T + + T+T SA ++ ATTPS + T + SGA S+
Sbjct: 4 TVLGQEVSTGVSNTEASASSTNTNTASADATASGTAATTPSAGTSTSTGEAAGSGASSE 62
>ref|NP_014653.1| induced by cold shock; Tir2p
sp|P33890|TIR2_YEAST COLD SHOCK INDUCED PROTEIN TIR2 PRECURSOR (SERINE-RICH PROTEIN 2)
pir||S61310 cold shock protein TIR2 precursor - yeast (Saccharomyces
cerevisiae)
gb|AAA92869.1| (L23521) TIR2 [Saccharomyces cerevisiae]
gb|AAC49490.1| (U43491) cold shock induced protein precursor [Saccharomyces
cerevisiae]
emb|CAA99198.1| (Z74918) ORF YOR010c [Saccharomyces cerevisiae]
Length = 251
Score = 32.1 bits (71), Expect = 4.0
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +3
Query: 96 ALSRSPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRASGADSDKS 275
A S S T +AV S + TTS+ A SSE + A S++ S A+S A + S+ +
Sbjct: 117 ASSTEASSAATSSAVASSSETTSSAVASSSEATSSAVASSSEASSSAATSSAVASSSEAT 176
Query: 276 T 278
+
Sbjct: 177 S 177
>gb|AAD51697.1|AF172332_1 (AF172332) major outer envelope glycoprotein gp350 [Human
herpesvirus 4]
Length = 886
Score = 31.7 bits (70), Expect = 5.2
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +3
Query: 93 TALSRSPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRAS 254
T + SP L +T+ P+ A TT TP+A S P TP+ P++ +S S
Sbjct: 529 TPTPNATSPTLGKTS-PTSAVTTPTPNATSPTPAVTTPTPNATIPTLGKTSPTS 581
>sp|Q07284|VGP3_EBVA8 ENVELOPE GLYCOPROTEIN GP340 (MEMBRANE ANTIGEN) (MA)
pir||S29605 glycoprotein 350/220 - human herpesvirus 4
emb|CAA47986.1| (X67776) glycoprotein 350/220 [Human herpesvirus 4]
gb|AAA02783.1| (L07922) glycoprotein 340 [Human herpesvirus 4]
gb|AAA02787.1| (L07923) glycoprotein 340 [Human herpesvirus 4]
Length = 886
Score = 31.7 bits (70), Expect = 5.2
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +3
Query: 93 TALSRSPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRAS 254
T + SP L +T+ P+ A TT TP+A S P TP+ P++ +S S
Sbjct: 529 TPTPNATSPTLGKTS-PTSAVTTPTPNATSPTPAVTTPTPNATIPTLGKTSPTS 581
>pir||T14004 trfA protein - slime mold (Dictyostelium discoideum)
dbj|BAA33143.1| (AB009080) TRFA [Dictyostelium discoideum]
Length = 1390
Score = 31.7 bits (70), Expect = 5.2
Identities = 22/63 (34%), Positives = 31/63 (48%), Gaps = 3/63 (4%)
Frame = +3
Query: 99 LSRSPSPRLTRTAVPSRARTTSTPSAVSSEPWARAT-TPSTDWPSV--TASSRASGADSD 269
++ +PS RL + PS A T STPS P + T P + + SS +S + S
Sbjct: 1265 ITSTPSKRLKPDSTPSSATTASTPSEQPESPLKKENPVGETLSPEIKDSKSSSSSSSSSS 1324
Query: 270 KSTKCG 287
ST G
Sbjct: 1325 SSTNTG 1330
>ref|NP_050265.1| U86
gb|AAD49674.1|AF157706_95 (AF157706) U86 [Human herpesvirus 6B]
Length = 1520
Score = 31.3 bits (69), Expect = 6.8
Identities = 23/61 (37%), Positives = 37/61 (59%), Gaps = 1/61 (1%)
Frame = +3
Query: 96 ALSRSPSPRLTRTAVPSRARTTSTPSA-VSSEPWARATTPSTDWPSVTASSRASGADSDK 272
A SR+ S +RT+ + +R S S+ VSS +RA++ ++ S ASSRASG S +
Sbjct: 764 ASSRASSRASSRTSSRASSRAFSRASSRVSSRASSRASSRASSRASSRASSRASGRASGR 823
Query: 273 ST 278
++
Sbjct: 824 AS 825
>gb|AAF49931.1| (AE003541) CG17615 gene product [Drosophila melanogaster]
Length = 285
Score = 30.9 bits (68), Expect = 9.0
Identities = 16/51 (31%), Positives = 25/51 (48%)
Frame = +3
Query: 108 SPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRASGA 260
+PSP T A + A ++ A ATTP++ P+ T S A+G+
Sbjct: 170 APSPAGTSVATSQLGGAVAAAIAAAAAAAAAATTPTSTGPAATGSGNANGS 220
>sp|P93329|NO20_MEDTR EARLY NODULIN 20 PRECURSOR (N-20)
emb|CAA67830.1| (X99467) ENOD20 [Medicago truncatula]
Length = 268
Score = 30.9 bits (68), Expect = 9.0
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = +3
Query: 102 SRSPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRASGA 260
S SPSP L+++ PS + + + + S A +++PS + PS S +SG+
Sbjct: 194 SPSPSPSLSKSPSPSESPSLAPSPSDSVASLAPSSSPSDESPSPAPSPSSSGS 246
>gb|AAD25169.1| (AF057697) serum opacity factor [Streptococcus pyogenes]
Length = 1029
Score = 30.9 bits (68), Expect = 9.0
Identities = 21/77 (27%), Positives = 41/77 (52%)
Frame = +3
Query: 108 SPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRASGADSDKSTKCG 287
+P+ +TA P+ TTS+ S+ + +P ATT ++ P A+S +S + T+
Sbjct: 104 TPASPQAQTA-PAATTTTSSASSSNEKPLKTATTTTSSTP---AASSSSNGNQVTGTEVE 159
Query: 288 KKLLDIWF*ESSKRNSD 338
+++D+ + K NS+
Sbjct: 160 PQMMDVEQYKVDKENSE 176
>gb|AAD56420.1|AF186605_1 (AF186605) MLL2 protein [Homo sapiens]
Length = 2605
Score = 30.9 bits (68), Expect = 9.0
Identities = 20/61 (32%), Positives = 24/61 (38%)
Frame = +3
Query: 108 SPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRASGADSDKSTKCG 287
SP P + T R R TPS + ARA T P+ T S+ G D T
Sbjct: 346 SPPPVVPATCSRKRGRPPLTPSQRAEREAARAGPEGTSPPTPTPSTATGGPPEDSPTVAP 405
Query: 288 K 290
K
Sbjct: 406 K 406
>emb|CAB61302.1| (AL132991) putative transcriptional regulatory protein
[Streptomyces coelicolor A3(2)]
Length = 292
Score = 30.9 bits (68), Expect = 9.0
Identities = 24/67 (35%), Positives = 37/67 (54%), Gaps = 13/67 (19%)
Frame = +3
Query: 93 TALSRSPSPRLTR----TAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRASG- 257
+A ++S + R TR T P RA + +S+P A+ T ST + A+++A+
Sbjct: 90 SAAAQSETDRRTRGRKTTTAPKRAAAAKPGAKPASKPKAKKATKSTATATTKATTKATAK 149
Query: 258 --------ADSDKSTKCGKK 293
AD STK G K
Sbjct: 150 TDKPADPKADPKPSTKTGTK 169
>ref|NP_055542.1| KIAA0304 gene product
emb|CAB45385.1| (AJ007041) trithorax homologue 2 [Homo sapiens]
Length = 2715
Score = 30.9 bits (68), Expect = 9.0
Identities = 20/61 (32%), Positives = 24/61 (38%)
Frame = +3
Query: 108 SPSPRLTRTAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRASGADSDKSTKCG 287
SP P + T R R TPS + ARA T P+ T S+ G D T
Sbjct: 456 SPPPVVPATCSRKRGRPPLTPSQRAEREAARAGPEGTSPPTPTPSTATGGPPEDSPTVAP 515
Query: 288 K 290
K
Sbjct: 516 K 516
>emb|CAB97456.1| (AL389900) conserved hypothetical protein [Neurospora crassa]
Length = 1213
Score = 30.9 bits (68), Expect = 9.0
Identities = 19/48 (39%), Positives = 24/48 (49%)
Frame = +3
Query: 132 TAVPSRARTTSTPSAVSSEPWARATTPSTDWPSVTASSRASGADSDKS 275
T V S TTST S +P A TT +TD + T + AS D K+
Sbjct: 18 TEVGSAKPTTSTYSKKQKKPKATTTTTTTDGTTPTHNEHASAKDPRKA 65
Database: nr
Posted date: Sep 29, 2000 9:53 PM
Number of letters in database: 177,575,912
Number of sequences in database: 565,281
Lambda K H
0.318 0.135 0.00
Gapped
Lambda K H
0.270 0.0470 4.94e-324
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 155243910
Number of Sequences: 565281
Number of extensions: 3205306
Number of successful extensions: 14361
Number of sequences better than 10.0: 118
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 14121
Number of HSP's gapped (non-prelim): 264
length of query: 161
length of database: 177,575,912
effective HSP length: 52
effective length of query: 109
effective length of database: 148,181,300
effective search space: 16151761700
effective search space used: 16151761700
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 68 (30.9 bits)