BLASTX 2.1.3 [Apr-1-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
/home/local/jxu/web/Fgr/NCPvsCOGs/blast/0941_D06_G11ZS5.seq
(894 letters)
Database: COGs
78,847 sequences; 26,228,252 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CDA339 CDa339 COG0050 [J] GTPases - translation elongation fact... 310 1e-93
CDA6331 CDa6331 COG0050 [J] GTPases - translation elongation fa... 309 2e-93
CDA1202 CDa1202 COG0050 [J] GTPases - translation elongation fa... 309 2e-93
YPR080W YPR080w COG0050 [J] GTPases - translation elongation fa... 310 3e-93
YBR118W YBR118w COG0050 [J] GTPases - translation elongation fa... 310 3e-93
MJ0324 MJ0324 COG0050 [J] GTPases - translation elongation fact... 242 2e-66
MTH1058 MTH1058 COG0050 [J] GTPases - translation elongation fa... 237 7e-65
AF0937 AF0937 COG0050 [J] GTPases - translation elongation fact... 233 4e-64
TA0444 Ta0444 COG0050 [J] GTPases - translation elongation fact... 228 2e-63
PH1484 PH1484 COG0050 [J] GTPases - translation elongation fact... 228 3e-62
TVN1051 TVN1051 COG0050 [J] GTPases - translation elongation fa... 224 5e-62
PAB0465 PAB0465 COG0050 [J] GTPases - translation elongation fa... 227 9e-62
APE1844 APE1844 COG0050 [J] GTPases - translation elongation fa... 223 3e-58
VNG2649G VNG2649G COG0050 [J] GTPases - translation elongation ... 202 1e-55
YDR172W_2 YDR172w_2 COG0050 [J] GTPases - translation elongatio... 100 2e-25
CDA4164_2 CDa4164_2 COG0050 [J] GTPases - translation elongatio... 98 3e-23
AQ_005 aq_005 COG0050 [J] GTPases - translation elongation fact... 83 7e-16
AQ_1928 aq_1928 COG0050 [J] GTPases - translation elongation fa... 82 1e-15
AF0744 AF0744 COG0050 [J] GTPases - translation elongation fact... 79 8e-15
VNG1676G VNG1676G COG0050 [J] GTPases - translation elongation ... 77 4e-14
YOR187W YOR187w COG0050 [J] GTPases - translation elongation fa... 75 2e-13
UU522 UU522 COG0050 [J] GTPases - translation elongation factors 74 3e-13
TM1502 TM1502 COG0050 [J] GTPases - translation elongation fact... 73 6e-13
CPN0074 CPn0074 COG0050 [J] GTPases - translation elongation fa... 73 6e-13
XF2640 XF2640 COG0050 [J] GTPases - translation elongation fact... 73 8e-13
XF2628 XF2628 COG0050 [J] GTPases - translation elongation fact... 73 8e-13
CDA7591 CDa7591 COG0050 [J] GTPases - translation elongation fa... 72 1e-12
BB0476 BB0476 COG0050 [J] GTPases - translation elongation fact... 71 2e-12
DR2050 DR2050 COG0050 [J] GTPases - translation elongation fact... 71 2e-12
DR0309 DR0309 COG0050 [J] GTPases - translation elongation fact... 71 2e-12
MTH1185 MTH1185 COG0050 [J] GTPases - translation elongation fa... 71 3e-12
RV0685 Rv0685 COG0050 [J] GTPases - translation elongation fact... 70 6e-12
L0371 L0371 COG0050 [J] GTPases - translation elongation factors 70 6e-12
SPY0611 SPy0611 COG0050 [J] GTPases - translation elongation fa... 69 8e-12
TUFB tufB COG0050 [J] GTPases - translation elongation factors 69 8e-12
TUFA tufA COG0050 [J] GTPases - translation elongation factors 69 8e-12
ZTUFB ZtufB COG0050 [J] GTPases - translation elongation factors 69 8e-12
ZTUFA ZtufA COG0050 [J] GTPases - translation elongation factors 69 8e-12
PM1746 PM1746 COG0050 [J] GTPases - translation elongation fact... 68 2e-11
PM1357 PM1357 COG0050 [J] GTPases - translation elongation fact... 68 2e-11
SLL1099 sll1099 COG0050 [J] GTPases - translation elongation fa... 68 2e-11
CT322 CT322 COG0050 [J] GTPases - translation elongation factors 67 3e-11
ML1877 ML1877 COG0050 [J] GTPases - translation elongation fact... 67 3e-11
RP661 RP661 COG0050 [J] GTPases - translation elongation factors 67 4e-11
BU526 BU526 COG0050 [J] GTPases - translation elongation factors 67 4e-11
HI0632 HI0632 COG0050 [J] GTPases - translation elongation fact... 67 5e-11
HI0578 HI0578 COG0050 [J] GTPases - translation elongation fact... 67 5e-11
CJ0470 Cj0470 COG0050 [J] GTPases - translation elongation fact... 67 5e-11
MLR0288 mlr0288 COG0050 [J] GTPases - translation elongation fa... 66 9e-11
MLR0263 mlr0263 COG0050 [J] GTPases - translation elongation fa... 66 9e-11
VC2559 VC2559 COG2895 [P] GTPases - Sulfate adenylate transfera... 66 9e-11
CC3199 CC3199 COG0050 [J] GTPases - translation elongation fact... 65 1e-10
CC1240 CC1240 COG0050 [J] GTPases - translation elongation fact... 65 1e-10
BS_TUFA BS_tufA COG0050 [J] GTPases - translation elongation fa... 65 1e-10
TP0187 TP0187 COG0050 [J] GTPases - translation elongation fact... 65 2e-10
PA4277 PA4277 COG0050 [J] GTPases - translation elongation fact... 65 2e-10
PA4265 PA4265 COG0050 [J] GTPases - translation elongation fact... 65 2e-10
NMB0139 NMB0139 COG0050 [J] GTPases - translation elongation fa... 64 3e-10
NMB0124 NMB0124 COG0050 [J] GTPases - translation elongation fa... 64 3e-10
NMA0149 NMA0149 COG0050 [J] GTPases - translation elongation fa... 64 3e-10
NMA0134 NMA0134 COG0050 [J] GTPases - translation elongation fa... 64 3e-10
HP1205 HP1205 COG0050 [J] GTPases - translation elongation fact... 64 3e-10
CDA8044 CDa8044 COG0050 [J] GTPases - translation elongation fa... 64 3e-10
XF1501_1 XF1501_1 COG2895 [P] GTPases - Sulfate adenylate trans... 64 4e-10
CYSN cysN COG2895 [P] GTPases - Sulfate adenylate transferase s... 63 6e-10
ZCYSN ZcysN COG2895 [P] GTPases - Sulfate adenylate transferase... 63 6e-10
CC1482_1 CC1482_1 COG2895 [P] GTPases - Sulfate adenylate trans... 63 6e-10
BH0132 BH0132 COG0050 [J] GTPases - translation elongation fact... 63 8e-10
MLR7576_1 mlr7576_1 COG2895 [P] GTPases - Sulfate adenylate tra... 62 1e-09
VC0362 VC0362 COG0050 [J] GTPases - translation elongation fact... 62 2e-09
VC0321 VC0321 COG0050 [J] GTPases - translation elongation fact... 62 2e-09
JHP1128 jhp1128 COG0050 [J] GTPases - translation elongation fa... 62 2e-09
MG451 MG451 COG0050 [J] GTPases - translation elongation factors 61 2e-09
MPN665 MPN665 COG0050 [J] GTPases - translation elongation fact... 60 4e-09
NMA1364 NMA1364 COG2895 [P] GTPases - Sulfate adenylate transfe... 60 5e-09
PA4442_1 PA4442_1 COG2895 [P] GTPases - Sulfate adenylate trans... 60 5e-09
NMB1191 NMB1191 COG2895 [P] GTPases - Sulfate adenylate transfe... 59 9e-09
NMB1153 NMB1153 COG2895 [P] GTPases - Sulfate adenylate transfe... 59 9e-09
RV1286_1 Rv1286_1 COG2895 [P] GTPases - Sulfate adenylate trans... 58 3e-08
MJ0325 MJ0325 COG0050 [J] GTPases - translation elongation fact... 58 3e-08
AQ_1033 aq_1033 COG3276 [J] Selenocysteine-specific translation... 55 2e-07
MJ0495 MJ0495 COG0050 [J] GTPases - translation elongation fact... 54 4e-07
TVN0359 TVN0359 COG0050 [J] GTPases - translation elongation fa... 52 2e-06
BU423 BU423 COG2895 [P] GTPases - Sulfate adenylate transferase... 51 3e-06
YKR084C YKR084c COG0050 [J] GTPases - translation elongation fa... 45 1e-04
AQ_1725 aq_1725 COG0481 [N] Membrane GTPase LepA 39 0.016
PH1706 PH1706 COG0050 [J] GTPases - translation elongation fact... 35 0.13
PAB2040 PAB2040 COG0050 [J] GTPases - translation elongation fa... 35 0.13
HI0709 HI0709 COG3276 [J] Selenocysteine-specific translation e... 35 0.23
VC2744 VC2744 COG1217 [N] Predicted membrane GTPase involved in... 33 0.51
HI0864 HI0864 COG1217 [N] Predicted membrane GTPase involved in... 33 0.51
PM1173 PM1173 COG1217 [N] Predicted membrane GTPase involved in... 33 0.66
ZYIHK ZyihK COG1217 [N] Predicted membrane GTPase involved in s... 33 0.87
TYPA typA COG1217 [N] Predicted membrane GTPase involved in str... 33 0.87
AF0592 AF0592 COG0050 [J] GTPases - translation elongation fact... 32 1.1
BS_RPLA BS_rplA COG0081 [J] Ribosomal protein L1 31 3.3
PM1766 PM1766 COG3276 [J] Selenocysteine-specific translation e... 31 3.3
SPY1527 SPy1527 COG1217 [N] Predicted membrane GTPase involved ... 30 4.3
NMA1370 NMA1370 COG1217 [N] Predicted membrane GTPase involved ... 30 4.3
BS_LEPA BS_lepA COG0481 [N] Membrane GTPase LepA 30 5.6
MLR4536 mlr4536 COG0481 [N] Membrane GTPase LepA 30 5.6
BH1342 BH1342 COG0481 [N] Membrane GTPase LepA 30 7.3
SPY1053 SPy1053 COG0481 [N] Membrane GTPase LepA 30 7.3
>CDA339 CDa339 COG0050 [J] GTPases - translation elongation factors
Length = 458
Score = 310 bits (793), Expect(2) = 1e-93
Identities = 151/225 (67%), Positives = 176/225 (78%), Gaps = 12/225 (5%)
Frame = +2
Query: 80 P*KVPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEPKRPSDK 223
P VPFVPISG+ GDNMIE STN WYKG TLLEA+D I P RP+DK
Sbjct: 183 PKTVPFVPISGWNGDNMIEASTNCPWYKGWEKETKSGKVTGKTLLEAIDAIEPPTRPTDK 242
Query: 224 PLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHESLLEALP 403
PLRLPLQDVYKIGGIGTVPVGRVETG+IK GMVVTF P G+TTEVKSVEMHHE L E +P
Sbjct: 243 PLRLPLQDVYKIGGIGTVPVGRVETGIIKAGMVVTFAPAGVTTEVKSVEMHHEQLAEGVP 302
Query: 404 GDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSXVIIMNHPGQIGNGYAPVLDCH 583
GDNVGFNVKNV+VK+++RG V +SK+DP K +F + VI++NHPGQI GY+PVLDCH
Sbjct: 303 GDNVGFNVKNVSVKEIRRGNVCGDSKNDPPKGCDSFNAQVIVLNHPGQISAGYSPVLDCH 362
Query: 584 TSHIAVKFAELVTKIDRRSGXEIEAAPKFLKNGDAGLVKMIPTSP 718
T+HIA KF LV KIDRR+G ++E PKF+K+GDA +VKM+PT P
Sbjct: 363 TAHIACKFDTLVEKIDRRTGKKLEENPKFVKSGDAAIVKMVPTKP 407
Score = 53.5 bits (127), Expect(2) = 1e-93
Identities = 26/41 (63%), Positives = 28/41 (67%)
Frame = +1
Query: 712 QPMGVETFATYPPLGSFGVRDLRQTVAVGGIKGVRKRTHPG 834
+PM VE F YPPLG F VRD+RQTVAVG IK V K G
Sbjct: 406 KPMCVEAFTDYPPLGRFAVRDMRQTVAVGVIKSVEKSDKAG 446
>CDA6331 CDa6331 COG0050 [J] GTPases - translation elongation
factors
Length = 458
Score = 309 bits (792), Expect(2) = 2e-93
Identities = 151/225 (67%), Positives = 176/225 (78%), Gaps = 12/225 (5%)
Frame = +2
Query: 80 P*KVPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEPKRPSDK 223
P VPFVPISG+ GDNMIE STN WYKG TLLEA+D I P RP+DK
Sbjct: 183 PKTVPFVPISGWNGDNMIEPSTNCPWYKGWEKETKSGKVTGKTLLEAIDAIEPPTRPTDK 242
Query: 224 PLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHESLLEALP 403
PLRLPLQDVYKIGGIGTVPVGRVETG+IK GMVVTF P G+TTEVKSVEMHHE L E +P
Sbjct: 243 PLRLPLQDVYKIGGIGTVPVGRVETGIIKAGMVVTFAPAGVTTEVKSVEMHHEQLAEGVP 302
Query: 404 GDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSXVIIMNHPGQIGNGYAPVLDCH 583
GDNVGFNVKNV+VK+++RG V +SK+DP K +F + VI++NHPGQI GY+PVLDCH
Sbjct: 303 GDNVGFNVKNVSVKEIRRGNVCGDSKNDPPKGCDSFNAQVIVLNHPGQISAGYSPVLDCH 362
Query: 584 TSHIAVKFAELVTKIDRRSGXEIEAAPKFLKNGDAGLVKMIPTSP 718
T+HIA KF LV KIDRR+G ++E PKF+K+GDA +VKM+PT P
Sbjct: 363 TAHIACKFDTLVEKIDRRTGKKLEENPKFVKSGDAAIVKMVPTKP 407
Score = 53.5 bits (127), Expect(2) = 2e-93
Identities = 26/41 (63%), Positives = 28/41 (67%)
Frame = +1
Query: 712 QPMGVETFATYPPLGSFGVRDLRQTVAVGGIKGVRKRTHPG 834
+PM VE F YPPLG F VRD+RQTVAVG IK V K G
Sbjct: 406 KPMCVEAFTDYPPLGRFAVRDMRQTVAVGVIKSVEKSDKAG 446
>CDA1202 CDa1202 COG0050 [J] GTPases - translation elongation
factors
Length = 458
Score = 309 bits (792), Expect(2) = 2e-93
Identities = 151/225 (67%), Positives = 176/225 (78%), Gaps = 12/225 (5%)
Frame = +2
Query: 80 P*KVPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEPKRPSDK 223
P VPFVPISG+ GDNMIE STN WYKG TLLEA+D I P RP+DK
Sbjct: 183 PKTVPFVPISGWNGDNMIEPSTNCPWYKGWEKETKSGKVTGKTLLEAIDAIEPPTRPTDK 242
Query: 224 PLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHESLLEALP 403
PLRLPLQDVYKIGGIGTVPVGRVETG+IK GMVVTF P G+TTEVKSVEMHHE L E +P
Sbjct: 243 PLRLPLQDVYKIGGIGTVPVGRVETGIIKAGMVVTFAPAGVTTEVKSVEMHHEQLAEGVP 302
Query: 404 GDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSXVIIMNHPGQIGNGYAPVLDCH 583
GDNVGFNVKNV+VK+++RG V +SK+DP K +F + VI++NHPGQI GY+PVLDCH
Sbjct: 303 GDNVGFNVKNVSVKEIRRGNVCGDSKNDPPKGCDSFNAQVIVLNHPGQISAGYSPVLDCH 362
Query: 584 TSHIAVKFAELVTKIDRRSGXEIEAAPKFLKNGDAGLVKMIPTSP 718
T+HIA KF LV KIDRR+G ++E PKF+K+GDA +VKM+PT P
Sbjct: 363 TAHIACKFDTLVEKIDRRTGKKLEENPKFVKSGDAAIVKMVPTKP 407
Score = 53.5 bits (127), Expect(2) = 2e-93
Identities = 26/41 (63%), Positives = 28/41 (67%)
Frame = +1
Query: 712 QPMGVETFATYPPLGSFGVRDLRQTVAVGGIKGVRKRTHPG 834
+PM VE F YPPLG F VRD+RQTVAVG IK V K G
Sbjct: 406 KPMCVEAFTDYPPLGRFAVRDMRQTVAVGVIKSVEKSDKAG 446
>YPR080W YPR080w COG0050 [J] GTPases - translation elongation
factors
Length = 458
Score = 310 bits (793), Expect(2) = 3e-93
Identities = 150/225 (66%), Positives = 178/225 (78%), Gaps = 12/225 (5%)
Frame = +2
Query: 80 P*KVPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEPKRPSDK 223
P VPFVPISG+ GDNMIE +TN WYKG TLLEA+D I +P RP+DK
Sbjct: 183 PKTVPFVPISGWNGDNMIEATTNAPWYKGWEKETKAGVVKGKTLLEAIDAIEQPSRPTDK 242
Query: 224 PLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHESLLEALP 403
PLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTF P G+TTEVKSVEMHHE L + +P
Sbjct: 243 PLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFAPAGVTTEVKSVEMHHEQLEQGVP 302
Query: 404 GDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSXVIIMNHPGQIGNGYAPVLDCH 583
GDNVGFNVKNV+VK+++RG V ++K+DP K A+F + VI++NHPGQI GY+PVLDCH
Sbjct: 303 GDNVGFNVKNVSVKEIRRGNVCGDAKNDPPKGCASFNATVIVLNHPGQISAGYSPVLDCH 362
Query: 584 TSHIAVKFAELVTKIDRRSGXEIEAAPKFLKNGDAGLVKMIPTSP 718
T+HIA +F EL+ K DRRSG ++E PKFLK+GDA LVK +P+ P
Sbjct: 363 TAHIACRFDELLEKNDRRSGKKLEDHPKFLKSGDAALVKFVPSKP 407
Score = 52.4 bits (124), Expect(2) = 3e-93
Identities = 25/36 (69%), Positives = 28/36 (77%)
Frame = +1
Query: 712 QPMGVETFATYPPLGSFGVRDLRQTVAVGGIKGVRK 819
+PM VE F+ YPPLG F VRD+RQTVAVG IK V K
Sbjct: 406 KPMCVEAFSEYPPLGRFAVRDMRQTVAVGVIKSVDK 441
>YBR118W YBR118w COG0050 [J] GTPases - translation elongation
factors
Length = 458
Score = 310 bits (793), Expect(2) = 3e-93
Identities = 150/225 (66%), Positives = 178/225 (78%), Gaps = 12/225 (5%)
Frame = +2
Query: 80 P*KVPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEPKRPSDK 223
P VPFVPISG+ GDNMIE +TN WYKG TLLEA+D I +P RP+DK
Sbjct: 183 PKTVPFVPISGWNGDNMIEATTNAPWYKGWEKETKAGVVKGKTLLEAIDAIEQPSRPTDK 242
Query: 224 PLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHESLLEALP 403
PLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTF P G+TTEVKSVEMHHE L + +P
Sbjct: 243 PLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFAPAGVTTEVKSVEMHHEQLEQGVP 302
Query: 404 GDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSXVIIMNHPGQIGNGYAPVLDCH 583
GDNVGFNVKNV+VK+++RG V ++K+DP K A+F + VI++NHPGQI GY+PVLDCH
Sbjct: 303 GDNVGFNVKNVSVKEIRRGNVCGDAKNDPPKGCASFNATVIVLNHPGQISAGYSPVLDCH 362
Query: 584 TSHIAVKFAELVTKIDRRSGXEIEAAPKFLKNGDAGLVKMIPTSP 718
T+HIA +F EL+ K DRRSG ++E PKFLK+GDA LVK +P+ P
Sbjct: 363 TAHIACRFDELLEKNDRRSGKKLEDHPKFLKSGDAALVKFVPSKP 407
Score = 52.4 bits (124), Expect(2) = 3e-93
Identities = 25/36 (69%), Positives = 28/36 (77%)
Frame = +1
Query: 712 QPMGVETFATYPPLGSFGVRDLRQTVAVGGIKGVRK 819
+PM VE F+ YPPLG F VRD+RQTVAVG IK V K
Sbjct: 406 KPMCVEAFSEYPPLGRFAVRDMRQTVAVGVIKSVDK 441
>MJ0324 MJ0324 COG0050 [J] GTPases - translation elongation factors
Length = 428
Score = 242 bits (618), Expect(2) = 2e-66
Identities = 110/213 (51%), Positives = 155/213 (72%)
Frame = +2
Query: 80 P*KVPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKI 259
P ++ F+P + +GDN+++RS N+ WYKGPTL+EALD+ P++P++ PLR+P+QDVY I
Sbjct: 180 PDQIDFIPTASLKGDNVVKRSENMPWYKGPTLVEALDKFQPPEKPTNLPLRIPIQDVYSI 239
Query: 260 GGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVA 439
G+GTVPVGRVETG+++PG V F P G++ EVKS+EMHHE + +A PGDN+GFNV+ V+
Sbjct: 240 TGVGTVPVGRVETGILRPGDKVVFEPAGVSGEVKSIEMHHEQIPQAEPGDNIGFNVRGVS 299
Query: 440 VKDLKRGFVASNSKDDPAKEAANFTSXVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELV 619
KD+KRG V + D+P A FT+ ++++ HP I GY PV HT+ +A F EL+
Sbjct: 300 KKDIKRGDVCGH-PDNPPTVAEEFTAQIVVLQHPTAITVGYTPVFHAHTAQVACTFIELL 358
Query: 620 TKIDRRSGXEIEAAPKFLKNGDAGLVKMIPTSP 718
K+D R+G IE P+FLK GDA +VK+ PT P
Sbjct: 359 KKLDPRTGQVIEENPQFLKTGDAAIVKIKPTKP 391
Score = 30.4 bits (67), Expect(2) = 2e-66
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 712 QPMGVETFATYPPLGSFGVRDLRQTVAVG 798
+PM +E P LG F +RD+ T+A G
Sbjct: 390 KPMVIENVREIPQLGRFAIRDMGMTIAAG 418
>MTH1058 MTH1058 COG0050 [J] GTPases - translation elongation
factors
Length = 413
Score = 237 bits (604), Expect(2) = 7e-65
Identities = 113/214 (52%), Positives = 150/214 (69%)
Frame = +2
Query: 77 QP*KVPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYK 256
+P V F+P+S FEGDN+ +S N WYKG TL+EALD + P++P D PLR+P+QDVY
Sbjct: 165 KPSDVEFIPLSAFEGDNITSKSENTPWYKGKTLVEALDDLEAPEKPVDLPLRIPIQDVYS 224
Query: 257 IGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNV 436
I G+GTVPVGRVETGV+K G V F P G++ EVKS+EMHHE + +A PGDN+GFNV+ V
Sbjct: 225 ITGVGTVPVGRVETGVLKKGENVIFEPAGVSGEVKSIEMHHEMIEQAEPGDNIGFNVRGV 284
Query: 437 AVKDLKRGFVASNSKDDPAKEAANFTSXVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEL 616
D++RG VA + D+P K A FT+ ++++ HPG I GY PV CHT+ +A F EL
Sbjct: 285 GKNDIRRGDVAGH-LDNPPKVAKEFTAQIVVLQHPGVITVGYTPVFHCHTAQVACTFLEL 343
Query: 617 VTKIDRRSGXEIEAAPKFLKNGDAGLVKMIPTSP 718
V K++ +G E P FLK G+A +VK+ PT P
Sbjct: 344 VQKMNPATGQVEEENPDFLKTGNAAVVKVKPTKP 377
Score = 30.4 bits (67), Expect(2) = 7e-65
Identities = 12/29 (41%), Positives = 18/29 (61%)
Frame = +1
Query: 712 QPMGVETFATYPPLGSFGVRDLRQTVAVG 798
+P+ +E P +G F +RD+ QTVA G
Sbjct: 376 KPLVIEKIKDIPHMGRFAIRDMGQTVAAG 404
>AF0937 AF0937 COG0050 [J] GTPases - translation elongation factors
Length = 423
Score = 233 bits (595), Expect(2) = 4e-64
Identities = 109/211 (51%), Positives = 150/211 (70%)
Frame = +2
Query: 86 KVPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGG 265
++PF+P+S + GDN+ ++S WY GPTLLEA D + P++ DKPLR+P+QDVY I G
Sbjct: 178 EIPFIPVSAYYGDNVAKKSDKTPWYNGPTLLEAFDLLKPPEKLVDKPLRIPIQDVYSISG 237
Query: 266 IGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVK 445
+GTVPVGRVE+GV++ G V F P G++ EVKS+EMHHE + EA PGDN+GFNV+ V+ K
Sbjct: 238 VGTVPVGRVESGVLRVGDKVVFEPAGVSGEVKSIEMHHEPIQEAYPGDNIGFNVRGVSKK 297
Query: 446 DLKRGFVASNSKDDPAKEAANFTSXVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTK 625
D++RG VA + D+P +FT+ ++++ HP I GY PV+ HT+ IA +F EL K
Sbjct: 298 DIRRGDVAGH-PDNPPTVVKDFTAQLVVLQHPTAITVGYTPVVHAHTAQIACRFVELQKK 356
Query: 626 IDRRSGXEIEAAPKFLKNGDAGLVKMIPTSP 718
ID R+G E P+FLK GDA +VK+ PT P
Sbjct: 357 IDPRTGQVKEENPQFLKTGDAAIVKLEPTRP 387
Score = 31.2 bits (69), Expect(2) = 4e-64
Identities = 12/37 (32%), Positives = 20/37 (53%)
Frame = +1
Query: 712 QPMGVETFATYPPLGSFGVRDLRQTVAVGGIKGVRKR 822
+PM +E PP+G F +RD+ T+ G + + R
Sbjct: 386 RPMVIERVKDIPPMGRFAIRDMGMTIGAGMVLDLTPR 422
>TA0444 Ta0444 COG0050 [J] GTPases - translation elongation factors
Length = 427
Score = 228 bits (582), Expect(2) = 2e-63
Identities = 107/210 (50%), Positives = 145/210 (68%)
Frame = +2
Query: 89 VPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGI 268
+ FVPISG++GDN+ + S N+ WYKGPTLL+ALD P++P +KPLR+P++DVY I GI
Sbjct: 184 ISFVPISGYKGDNVTKPSPNMPWYKGPTLLQALDAFKVPEKPINKPLRIPVEDVYSITGI 243
Query: 269 GTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKD 448
GTVPVGRVETGV+KPG V F P +VKS+EMHHE L +A PGDN+GFNV+ +A D
Sbjct: 244 GTVPVGRVETGVLKPGDKVIFLPADKQGDVKSIEMHHEPLQQAEPGDNIGFNVRGIAKND 303
Query: 449 LKRGFVASNSKDDPAKEAANFTSXVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKI 628
+KRG V + D P FT+ +I++NHP I GY PV HT+ +A + E+V +
Sbjct: 304 IKRGDVCGH-LDTPPTVVKAFTAQIIVLNHPSVIAPGYKPVFHVHTAQVACRIDEIVKTL 362
Query: 629 DRRSGXEIEAAPKFLKNGDAGLVKMIPTSP 718
+ + G ++ P F+KNGD +VK+IP P
Sbjct: 363 NPKDGTTLKEKPDFIKNGDVAIVKVIPDKP 392
Score = 33.9 bits (76), Expect(2) = 2e-63
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +1
Query: 712 QPMGVETFATYPPLGSFGVRDLRQTVAVGGIKGVRKR 822
+P+ +E + P LG F VRD+ QTVA G + KR
Sbjct: 391 KPLVIEKVSEIPQLGRFAVRDMGQTVAAGQCIDLEKR 427
>PH1484 PH1484 COG0050 [J] GTPases - translation elongation factors
Length = 428
Score = 228 bits (582), Expect(2) = 3e-62
Identities = 109/217 (50%), Positives = 150/217 (68%), Gaps = 8/217 (3%)
Frame = +2
Query: 92 PFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIG 271
P +P S + GDN++++S + WY GPTL+EALDQI EP++P DKPLR+P+QDVY I G+G
Sbjct: 176 PVIPTSAWNGDNVVKKSDKMPWYNGPTLIEALDQIPEPEKPIDKPLRIPIQDVYSIKGVG 235
Query: 272 TVPVGRVETGVIKPGMVVTFGPTG------LTTEVKSVEMHHESLLEALPGDNVGFNVKN 433
TVPVGRVETG +K G VV F P + EVKS+EMHHE L EALPGDN+GFNV+
Sbjct: 236 TVPVGRVETGKLKVGDVVIFEPASTIFHKPIQGEVKSIEMHHEPLQEALPGDNIGFNVRG 295
Query: 434 VAVKDLKRGFVASNSKDDP--AKEAANFTSXVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 607
V+ D+KRG VA ++ P + F + +I++NHP I GY+PVL HT+ I V+F
Sbjct: 296 VSKNDIKRGDVAGHTDKPPTVVRTKDTFKAQIIVLNHPTAITVGYSPVLHAHTAQIPVRF 355
Query: 608 AELVTKIDRRSGXEIEAAPKFLKNGDAGLVKMIPTSP 718
+++ K+D R+G +E P+F+K GD+ +V + P P
Sbjct: 356 EQILAKVDPRTGNIVEENPQFIKTGDSAIVVLRPMKP 392
Score = 30.0 bits (66), Expect(2) = 3e-62
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 712 QPMGVETFATYPPLGSFGVRDLRQTVAVGGIKGVRK 819
+P+ +E P LG F +RD+ T+A G + ++K
Sbjct: 391 KPVVLEPVKEIPQLGRFAIRDMGMTIAAGMVISIQK 426
>TVN1051 TVN1051 COG0050 [J] GTPases - translation elongation
factors
Length = 424
Score = 224 bits (570), Expect(2) = 5e-62
Identities = 105/208 (50%), Positives = 143/208 (68%)
Frame = +2
Query: 95 FVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGT 274
FVPISG++GDN+ + S N+ WYKGP+LL+ALD P++P +KPLR+P++DVY I GIGT
Sbjct: 183 FVPISGYKGDNVTKPSPNMPWYKGPSLLQALDAFKVPEKPINKPLRVPVEDVYSITGIGT 242
Query: 275 VPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLK 454
VPVGRVETGV+KPG V F P +VKS+EMHHE L +A PGDN+GFNV+ +A D+K
Sbjct: 243 VPVGRVETGVLKPGDKVIFLPADKQGDVKSIEMHHEPLQQAEPGDNIGFNVRGIAKNDIK 302
Query: 455 RGFVASNSKDDPAKEAANFTSXVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDR 634
RG V + D P FT+ ++++NHP I GY PV HT+ +A K E+V ++
Sbjct: 303 RGDVCGH-LDSPPTVVRAFTAQIVVLNHPSVIAPGYKPVFHVHTAQVACKIDEIVRTLNP 361
Query: 635 RSGXEIEAAPKFLKNGDAGLVKMIPTSP 718
+ G ++ P F+K GD +VK+IP P
Sbjct: 362 KDGTTLKDKPDFIKTGDIAIVKVIPDKP 389
Score = 33.9 bits (76), Expect(2) = 5e-62
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +1
Query: 712 QPMGVETFATYPPLGSFGVRDLRQTVAVGGIKGVRKR 822
+P+ +E + P LG F VRD+ QTVA G + KR
Sbjct: 388 KPLVIEKVSEIPQLGRFAVRDMGQTVAAGQCIDLEKR 424
>PAB0465 PAB0465 COG0050 [J] GTPases - translation elongation
factors
Length = 428
Score = 227 bits (578), Expect(2) = 9e-62
Identities = 110/217 (50%), Positives = 148/217 (67%), Gaps = 8/217 (3%)
Frame = +2
Query: 92 PFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIG 271
P +P S + GDN++++S + WY GPTL+EALDQI EP++P DKPLR+P+QDVY I G+G
Sbjct: 176 PVIPTSAWNGDNIVKKSDKMPWYNGPTLIEALDQIPEPEKPVDKPLRIPIQDVYSIKGVG 235
Query: 272 TVPVGRVETGVIKPGMVVTFGPTG------LTTEVKSVEMHHESLLEALPGDNVGFNVKN 433
TVPVGRVETG +K G VV F P + EVKS+EMHHE L EALPGDN+GFNV+
Sbjct: 236 TVPVGRVETGKLKVGDVVIFEPASTIFHKPIQGEVKSIEMHHEPLQEALPGDNIGFNVRG 295
Query: 434 VAVKDLKRGFVASNSKDDP--AKEAANFTSXVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 607
V+ D+KRG VA + P + F + +I++NHP I GY+PVL HT+ + V+F
Sbjct: 296 VSKNDIKRGDVAGHPDKPPTVVRTKDTFKAQIIVLNHPTAITVGYSPVLHAHTAQVPVRF 355
Query: 608 AELVTKIDRRSGXEIEAAPKFLKNGDAGLVKMIPTSP 718
+L+ KID R+G E P+F+K GD+ +V + P P
Sbjct: 356 EQLLAKIDPRTGNITEENPQFIKTGDSAIVVLRPMKP 392
Score = 30.0 bits (66), Expect(2) = 9e-62
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 712 QPMGVETFATYPPLGSFGVRDLRQTVAVGGIKGVRK 819
+P+ +E P LG F +RD+ T+A G + ++K
Sbjct: 391 KPVVLEPVKELPQLGRFAIRDMGMTIAAGMVISIQK 426
>APE1844 APE1844 COG0050 [J] GTPases - translation elongation
factors
Length = 437
Score = 223 bits (569), Expect = 3e-58
Identities = 104/211 (49%), Positives = 147/211 (69%)
Frame = +2
Query: 86 KVPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGG 265
K+PF+P+S ++GDN+IERS N+ WY GPTL+EALDQ+ P +P DKPLR+P+Q+VY I G
Sbjct: 186 KIPFIPVSAWKGDNLIERSPNMPWYNGPTLVEALDQLQPPAKPVDKPLRIPVQNVYSIPG 245
Query: 266 IGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVK 445
GTVPVGRVETGV++ G V F P G+ EV+S+EMH++ L +A PGDN+GF V+ V+
Sbjct: 246 AGTVPVGRVETGVLRVGDKVVFMPPGVVGEVRSIEMHYQQLQQAEPGDNIGFAVRGVSKS 305
Query: 446 DLKRGFVASNSKDDPAKEAANFTSXVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTK 625
D+KRG VA + D P A F + + ++ HP I GY PV+ HT+ ++ + E+ K
Sbjct: 306 DIKRGDVAGH-LDKPPTVAEEFEARIFVIWHPSAITVGYTPVIHVHTASVSSRIIEIKAK 364
Query: 626 IDRRSGXEIEAAPKFLKNGDAGLVKMIPTSP 718
+D ++G +E P+FLK GDA +V+ P P
Sbjct: 365 LDPKTGQVVEQNPQFLKAGDAAIVRFKPVKP 395
>VNG2649G VNG2649G COG0050 [J] GTPases - translation elongation
factors
Length = 421
Score = 202 bits (513), Expect(2) = 1e-55
Identities = 101/213 (47%), Positives = 134/213 (62%)
Frame = +2
Query: 80 P*KVPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKI 259
P F+ S FEGDN+ + S N WY GPTLLEAL+ + P+ P+D LRLP+QDVY I
Sbjct: 175 PDDAKFIATSAFEGDNVSDHSDNTPWYDGPTLLEALNGLPVPQPPTDADLRLPIQDVYTI 234
Query: 260 GGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVA 439
GIGTVPVGR+ETGV+ G V+F P+ + EVK++EMHHE + A PGDNVGFNV+ +
Sbjct: 235 SGIGTVPVGRIETGVMNTGDNVSFQPSDVGGEVKTIEMHHEEVPNAEPGDNVGFNVRGIG 294
Query: 440 VKDLKRGFVASNSKDDPAKEAANFTSXVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELV 619
D++RG V + DDP A F + V++M HP I GY PV HT+ +A +
Sbjct: 295 KDDIRRGDVCGPA-DDPPSVADTFQAQVVVMQHPSVITAGYTPVFHAHTAQVACTIESID 353
Query: 620 TKIDRRSGXEIEAAPKFLKNGDAGLVKMIPTSP 718
K+D SG E P F+++GDA +V + P P
Sbjct: 354 KKMDPASGETQEENPDFIQSGDAAVVTVRPQKP 386
Score = 34.7 bits (78), Expect(2) = 1e-55
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 712 QPMGVETFATYPPLGSFGVRDLRQTVAVGGIKGV 813
+P+ +E + P LGSF VRD+ QT+A G + V
Sbjct: 385 KPLSLEPSSEIPELGSFAVRDMGQTIAAGKVLDV 418
>YDR172W_2 YDR172w_2 COG0050 [J] GTPases - translation elongation
factors
Length = 432
Score = 100 bits (250), Expect(2) = 2e-25
Identities = 60/201 (29%), Positives = 104/201 (50%), Gaps = 3/201 (1%)
Frame = +2
Query: 89 VPFVPISGFEGDNMIER--STNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIG 262
V F+P+SG+ G N+ + WY GPTLLE LD +N R + P LP+ K+
Sbjct: 189 VVFMPVSGYSGANLKDHVDPKECPWYTGPTLLEYLDTMNHVDRHINAPFMLPI--AAKMK 246
Query: 263 GIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHESLLE-ALPGDNVGFNVKNVA 439
+GT+ G++E+G IK G P E++++ E+ ++ A+ G+ V +K V
Sbjct: 247 DLGTIVEGKIESGHIKKGQSTLLMPNKTAVEIQNIYNETENEVDMAMCGEQVKLRIKGVE 306
Query: 440 VKDLKRGFVASNSKDDPAKEAANFTSXVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELV 619
+D+ GFV ++ K +P K F + + I+ I G++ V+ HT+ V +L+
Sbjct: 307 EEDISPGFVLTSPK-NPIKSVTKFVAQIAIVELKSIIAAGFSCVMHVHTAIEEVHIVKLL 365
Query: 620 TKIDRRSGXEIEAAPKFLKNG 682
K+++ + + + P F K G
Sbjct: 366 HKLEKGTNRKSKKPPAFAKKG 386
Score = 34.7 bits (78), Expect(2) = 2e-25
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 703 DSHQPMGVETFATYPPLGSFGVRDLRQTVAVGGI 804
++ P+ VET+ YP LG F +RD T+A+G I
Sbjct: 394 ETEAPVCVETYQDYPQLGRFTLRDQGTTIAIGKI 427
>CDA4164_2 CDa4164_2 COG0050 [J] GTPases - translation elongation
factors
Length = 430
Score = 97.8 bits (242), Expect(2) = 3e-23
Identities = 58/199 (29%), Positives = 104/199 (52%), Gaps = 3/199 (1%)
Frame = +2
Query: 95 FVPISGFEGDNMIERSTNLD--WYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGI 268
++P+SG+ G + +R D WY GP+LLE LD ++ R + P +P+ K+ +
Sbjct: 190 YMPVSGYTGAGLKDRVDPKDCPWYDGPSLLEYLDNMDTMNRKINGPFMMPVSG--KMKDL 247
Query: 269 GTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHESLLE-ALPGDNVGFNVKNVAVK 445
GT+ G++E+G +K G + P EV ++ E + A G+ V +K + +
Sbjct: 248 GTIVEGKIESGHVKKGTNLIMMPNKTPIEVLTIFNETEQECDTAFSGEQVRLKIKGIEEE 307
Query: 446 DLKRGFVASNSKDDPAKEAANFTSXVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTK 625
DL+ G+V ++ K+ P K F + + I+ + NG++ V+ HT+ VKF EL K
Sbjct: 308 DLQPGYVLTSPKN-PVKTVTRFEAQIAIVELKSILSNGFSCVMHLHTAIEEVKFIELKHK 366
Query: 626 IDRRSGXEIEAAPKFLKNG 682
+++ + + + P F K G
Sbjct: 367 LEKGTNRKSKKPPAFAKKG 385
Score = 30.4 bits (67), Expect(2) = 3e-23
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 727 ETFATYPPLGSFGVRDLRQTVAVGGI 804
ET+ YP LG F +RD T+A+G I
Sbjct: 401 ETYKDYPQLGRFTLRDQGTTIAIGKI 426
>AQ_005 aq_005 COG0050 [J] GTPases - translation elongation factors
Length = 405
Score = 82.8 bits (203), Expect = 7e-16
Identities = 51/132 (38%), Positives = 75/132 (56%), Gaps = 5/132 (3%)
Frame = +2
Query: 86 KVPFVPISGFEGDNMIERSTNLDWYKG-PTLLEALDQ-INEPKRPSDKPLRLPLQDVYKI 259
+VP + S +E+++ W + LL A+D+ I P+R DKP +P++DV+ I
Sbjct: 171 EVPVIRGSALGALQELEQNSPGKWVESIKELLNAMDEYIPTPQREVDKPFLMPIEDVFSI 230
Query: 260 GGIGTVPVGRVETGVIKPG---MVVTFGPTGLTTEVKSVEMHHESLLEALPGDNVGFNVK 430
G GTV GRVE GV++PG +V L T S+EM + L EALPGDN+G ++
Sbjct: 231 SGRGTVVTGRVERGVLRPGDEVEIVGLREEPLKTVATSIEMFRKVLDEALPGDNIGVLLR 290
Query: 431 NVAVKDLKRGFV 466
V D++RG V
Sbjct: 291 GVGKDDVERGQV 302
>AQ_1928 aq_1928 COG0050 [J] GTPases - translation elongation
factors
Length = 405
Score = 82.4 bits (202), Expect = 1e-15
Identities = 51/132 (38%), Positives = 75/132 (56%), Gaps = 5/132 (3%)
Frame = +2
Query: 86 KVPFVPISGFEGDNMIERSTNLDWYKG-PTLLEALDQ-INEPKRPSDKPLRLPLQDVYKI 259
+VP + S +E+++ W + LL A+D+ I P+R DKP +P++DV+ I
Sbjct: 171 EVPVIRGSALGALQELEQNSPGKWVESIKELLNAMDEYIPTPQREVDKPFLMPIEDVFSI 230
Query: 260 GGIGTVPVGRVETGVIKPG---MVVTFGPTGLTTEVKSVEMHHESLLEALPGDNVGFNVK 430
G GTV GRVE GV++PG +V L T S+EM + L EALPGDN+G ++
Sbjct: 231 SGRGTVVTGRVERGVLRPGDEVEIVGLREEPLKTVATSIEMFRKVLDEALPGDNIGVLLR 290
Query: 431 NVAVKDLKRGFV 466
V D++RG V
Sbjct: 291 GVGRDDVERGQV 302
>AF0744 AF0744 COG0050 [J] GTPases - translation elongation factors
Length = 565
Score = 79.3 bits (194), Expect = 8e-15
Identities = 57/186 (30%), Positives = 86/186 (45%), Gaps = 10/186 (5%)
Frame = +2
Query: 176 LEALDQINE-----PKR-PSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGP 337
LE D + E PKR +D+ + + +Y + G+GTV G V++G + G V GP
Sbjct: 365 LEGYDILEEIFLHLPKRYTADEDFLMYIDKIYSVTGVGTVVSGSVKSGELAEGDEVYIGP 424
Query: 338 ----TGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAA 505
+ ++S+EMHH + A GD +G VK V +L+RG V S + E
Sbjct: 425 FQDGSFRRVRIQSIEMHHYRIDRAKAGDIIGAAVKGVRYDELRRGMVISRKEPRAVWE-- 482
Query: 506 NFTSXVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGXEIEAAPKFLKNGD 685
F + + + HP I GY PV+ T V F +E ++LK GD
Sbjct: 483 -FDAEIYVFTHPTLISVGYEPVMHVETISETVTF--------------VEMDKEYLKPGD 527
Query: 686 AGLVKM 703
G+V+M
Sbjct: 528 RGIVRM 533
>VNG1676G VNG1676G COG0050 [J] GTPases - translation elongation
factors
Length = 540
Score = 77.0 bits (188), Expect = 4e-14
Identities = 44/132 (33%), Positives = 70/132 (52%), Gaps = 4/132 (3%)
Frame = +2
Query: 224 PLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGP----TGLTTEVKSVEMHHESLL 391
P R+ + Y + G+G V G V++G ++ G + GP + T EV+S+EMH+ +
Sbjct: 360 PFRMYVDRTYSVTGVGAVASGTVKSGTVEDGETLLLGPFPNGSFRTVEVRSIEMHYHRVD 419
Query: 392 EALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSXVIIMNHPGQIGNGYAPV 571
A G VG +K V+ + ++RG V DP A F + V+++NHP +I GY PV
Sbjct: 420 SAQAGRIVGIALKGVSEEAIERGMVLLPGDADPTPVRA-FDAEVMVLNHPTRIDAGYEPV 478
Query: 572 LDCHTSHIAVKF 607
+ T A +F
Sbjct: 479 VHLETIGEAARF 490
>YOR187W YOR187w COG0050 [J] GTPases - translation elongation
factors
Length = 437
Score = 75.1 bits (183), Expect = 2e-13
Identities = 51/153 (33%), Positives = 77/153 (49%), Gaps = 10/153 (6%)
Frame = +2
Query: 173 LLEALDQ-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPG---MVVTFGPT 340
LL+A+D+ I P+R +KP +P++D++ I G GTV GRVE G +K G +V T
Sbjct: 230 LLDAVDEYIPTPERDLNKPFLMPVEDIFSISGRGTVVTGRVERGNLKKGEELEIVGHNST 289
Query: 341 GLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSX 520
L T V +EM + L A+ GDN G ++ + LKRG V +K K +
Sbjct: 290 PLKTTVTGIEMFRKELDSAMAGDNAGVLLRGIRRDQLKRGMVL--AKPGTVKAHTKILAS 347
Query: 521 VIIMN------HPGQIGNGYAPVLDCHTSHIAV 601
+ I++ H G G Y P + T+ + V
Sbjct: 348 LYILSKEEGGRHSG-FGENYRPQMFIRTADVTV 379
>UU522 UU522 COG0050 [J] GTPases - translation elongation factors
Length = 394
Score = 74.3 bits (181), Expect = 3e-13
Identities = 59/195 (30%), Positives = 96/195 (48%), Gaps = 14/195 (7%)
Frame = +2
Query: 110 GFEGDNM-IERSTNLDWYKGPTLLEA-LDQINE--------PKRPSDKPLRLPLQDVYKI 259
GF+GDN + R + L +G + EA +D++ + P+R +DKP L ++DV+ I
Sbjct: 162 GFDGDNTPVIRGSGLKALEGDPVWEAKIDELMDAVDSWIPLPERSTDKPFLLAIEDVFTI 221
Query: 260 GGIGTVPVGRVETGVIKPGMVVTFGPTGL----TTEVKSVEMHHESLLEALPGDNVGFNV 427
G GTV GRVE GV+K V GL T V +EM +SL +A GDN G +
Sbjct: 222 SGRGTVVTGRVERGVLKVNDEVEI--VGLKDTQKTVVTGIEMFRKSLDQAEAGDNAGILL 279
Query: 428 KNVAVKDLKRGFVASNSKDDPAKEAANFTSXVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 607
+ + +D++RG V K K FT+ V I+ + G + P++ + +
Sbjct: 280 RGIKKEDVERGQVL--VKPGSIKPHRTFTAKVYILKK--EEGGRHTPIVSGYRPQFYFRT 335
Query: 608 AELVTKIDRRSGXEI 652
++ I +G ++
Sbjct: 336 TDVTGAISLPAGVDL 350
>TM1502 TM1502 COG0050 [J] GTPases - translation elongation factors
Length = 400
Score = 73.2 bits (178), Expect = 6e-13
Identities = 44/104 (42%), Positives = 64/104 (61%), Gaps = 6/104 (5%)
Frame = +2
Query: 173 LLEALDQ-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLT 349
LL+A+D I +P+R DKP +P++DV+ I G GTV GR+E G I+PG V GL+
Sbjct: 196 LLDAMDNYIPDPQRDVDKPFLMPIEDVFSITGRGTVVTGRIERGRIRPGDEVEI--IGLS 253
Query: 350 TEVK-----SVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFV 466
E+K SVEM + L E + GDNVG ++ + +++RG V
Sbjct: 254 YEIKKTVVTSVEMFRKELDEGIAGDNVGCLLRGIDKDEVERGQV 297
>CPN0074 CPn0074 COG0050 [J] GTPases - translation elongation
factors
Length = 394
Score = 73.2 bits (178), Expect = 6e-13
Identities = 50/147 (34%), Positives = 74/147 (50%), Gaps = 4/147 (2%)
Frame = +2
Query: 104 ISGFEGD-NMIERSTNLDWYKGPTLLEALDQ-INEPKRPSDKPLRLPLQDVYKIGGIGTV 277
+ EGD N IE+ L ++A+D I P+R DKP +P++DV+ I G GTV
Sbjct: 176 LKALEGDANYIEKVREL--------MQAVDDNIPTPEREIDKPFLMPIEDVFSISGRGTV 227
Query: 278 PVGRVETGVIKPGMVVTFGPTGLTTE--VKSVEMHHESLLEALPGDNVGFNVKNVAVKDL 451
GR+E G++K V G T E V VEM + L E G+NVG ++ + D+
Sbjct: 228 VTGRIERGIVKVSDKVQLVGLGETKETIVTGVEMFRKELPEGRAGENVGLLLRGIGKNDV 287
Query: 452 KRGFVASNSKDDPAKEAANFTSXVIIM 532
+RG V + + K F S V ++
Sbjct: 288 ERGMVV--CQPNSVKPHTKFKSAVYVL 312
>XF2640 XF2640 COG0050 [J] GTPases - translation elongation factors
Length = 396
Score = 72.8 bits (177), Expect = 8e-13
Identities = 53/164 (32%), Positives = 82/164 (49%), Gaps = 4/164 (2%)
Frame = +2
Query: 173 LLEALD-QINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPG---MVVTFGPT 340
L EALD I P+R D+P +P++DV+ I G GTV GRVE GVIK G +V PT
Sbjct: 194 LAEALDTHIPNPERAIDRPFLMPVEDVFSISGRGTVVTGRVECGVIKVGDEVEIVGIRPT 253
Query: 341 GLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSX 520
T V VEM + L + GDN G ++ +++RG V +K K F +
Sbjct: 254 SKTI-VTGVEMFRKLLDQGQAGDNAGLLLRGTKRDEVERGQVL--AKPGSIKAHKEFEAE 310
Query: 521 VIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGXEI 652
V +++ + G + P + +T ++ ++ K+ G E+
Sbjct: 311 VYVLSK--EEGGRHTPFFNGYTPQFYMRTTDITGKVCLPEGVEM 352
>XF2628 XF2628 COG0050 [J] GTPases - translation elongation factors
Length = 396
Score = 72.8 bits (177), Expect = 8e-13
Identities = 53/164 (32%), Positives = 82/164 (49%), Gaps = 4/164 (2%)
Frame = +2
Query: 173 LLEALD-QINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPG---MVVTFGPT 340
L EALD I P+R D+P +P++DV+ I G GTV GRVE GVIK G +V PT
Sbjct: 194 LAEALDTHIPNPERAIDRPFLMPVEDVFSISGRGTVVTGRVECGVIKVGDEVEIVGIRPT 253
Query: 341 GLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSX 520
T V VEM + L + GDN G ++ +++RG V +K K F +
Sbjct: 254 SKTI-VTGVEMFRKLLDQGQAGDNAGLLLRGTKRDEVERGQVL--AKPGSIKAHKEFEAE 310
Query: 521 VIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGXEI 652
V +++ + G + P + +T ++ ++ K+ G E+
Sbjct: 311 VYVLSK--EEGGRHTPFFNGYTPQFYMRTTDITGKVCLPEGVEM 352
>CDA7591 CDa7591 COG0050 [J] GTPases - translation elongation
factors
Length = 426
Score = 72.0 bits (175), Expect = 1e-12
Identities = 51/155 (32%), Positives = 75/155 (47%), Gaps = 9/155 (5%)
Frame = +2
Query: 173 LLEALDQ-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPG---MVVTFGPT 340
LL+A+D+ I P R ++P LP++DV+ I G GTV GRVE GV+K G +V
Sbjct: 218 LLDAVDEHIPTPSRDLEQPFLLPVEDVFSISGRGTVVTGRVERGVLKKGEEIEIVGGFDK 277
Query: 341 GLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSX 520
T V +EM + L A+ GDN G ++ V ++KRG V +K A F +
Sbjct: 278 PYKTTVTGIEMFKKELDSAMAGDNCGVLLRGVKRDEIKRGMVL--AKPGTATSHKKFLAS 335
Query: 521 VIIM-----NHPGQIGNGYAPVLDCHTSHIAVKFA 610
+ I+ G GY P T+ + F+
Sbjct: 336 LYILTSEEGGRSTPFGEGYKPQCFFRTNDVTTTFS 370
>BB0476 BB0476 COG0050 [J] GTPases - translation elongation factors
Length = 401
Score = 71.2 bits (173), Expect = 2e-12
Identities = 45/104 (43%), Positives = 61/104 (58%), Gaps = 4/104 (3%)
Frame = +2
Query: 173 LLEALDQINE-PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGM---VVTFGPT 340
LLE++D + P+R DKP L ++DV+ I G GTV GR+E G+IK G +V T
Sbjct: 200 LLESMDNYFDLPERDIDKPFLLAVEDVFSISGRGTVATGRIERGIIKVGQEVEIVGIKET 259
Query: 341 GLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFVAS 472
TT V VEM + L + GDNVG ++ V KD++RG V S
Sbjct: 260 RKTT-VTGVEMFQKILEQGQAGDNVGLLLRGVDKKDIERGQVLS 302
>DR2050 DR2050 COG0050 [J] GTPases - translation elongation factors
Length = 405
Score = 71.2 bits (173), Expect = 2e-12
Identities = 54/152 (35%), Positives = 77/152 (50%), Gaps = 11/152 (7%)
Frame = +2
Query: 173 LLEALDQ-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLT 349
LL+A+D I P+R +DK +P++DV+ I G GTV GRVE G +K V GLT
Sbjct: 203 LLDAVDSYIPTPERDTDKTFLMPVEDVFTITGRGTVATGRVERGTVKVQDEVEI--VGLT 260
Query: 350 ----TEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTS 517
T V +EMH + L + GDNVG ++ VA D++RG V +K K F +
Sbjct: 261 DTRKTTVTGIEMHRKLLDSGMAGDNVGVLLRGVARDDVERGQVL--AKPGSIKPHTKFEA 318
Query: 518 XVIIMN------HPGQIGNGYAPVLDCHTSHI 595
V +++ H G GY P T+ +
Sbjct: 319 SVYVLSKDEGGRHSAFFG-GYRPQFYFRTTDV 349
>DR0309 DR0309 COG0050 [J] GTPases - translation elongation factors
Length = 405
Score = 71.2 bits (173), Expect = 2e-12
Identities = 54/152 (35%), Positives = 77/152 (50%), Gaps = 11/152 (7%)
Frame = +2
Query: 173 LLEALDQ-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLT 349
LL+A+D I P+R +DK +P++DV+ I G GTV GRVE G +K V GLT
Sbjct: 203 LLDAVDSYIPTPERDTDKTFLMPVEDVFTITGRGTVATGRVERGTVKVQDEVEI--VGLT 260
Query: 350 ----TEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTS 517
T V +EMH + L + GDNVG ++ VA D++RG V +K K F +
Sbjct: 261 DTRKTTVTGIEMHRKLLDSGMAGDNVGVLLRGVARDDVERGQVL--AKPGSIKPHTKFEA 318
Query: 518 XVIIMN------HPGQIGNGYAPVLDCHTSHI 595
V +++ H G GY P T+ +
Sbjct: 319 SVYVLSKDEGGRHSAFFG-GYRPQFYFRTTDV 349
>MTH1185 MTH1185 COG0050 [J] GTPases - translation elongation
factors
Length = 529
Score = 70.9 bits (172), Expect = 3e-12
Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 10/147 (6%)
Frame = +2
Query: 176 LEALDQ------INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGP 337
LE LD+ + ++P + + +Y I G+GTV G ++ G+++ G + GP
Sbjct: 326 LEILDELFLNLRVRRDVNGDEEPFLMYIDKIYSIRGVGTVVSGTIQQGLVRKGDTLLLGP 385
Query: 338 --TGLTTEV--KSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAA 505
TG EV KS+EMHH + A PG VG ++ + +++RG + ++ DP +
Sbjct: 386 LKTGKFREVTVKSIEMHHYRIGCAEPGHIVGISISGASPDEIERGMILAHPDYDP-EAVR 444
Query: 506 NFTSXVIIMNHPGQIGNGYAPVLDCHT 586
F + V I+ HP I GY V T
Sbjct: 445 EFEAEVAILVHPTTIKAGYESVTHIET 471
>RV0685 Rv0685 COG0050 [J] GTPases - translation elongation factors
Length = 396
Score = 69.7 bits (169), Expect = 6e-12
Identities = 42/104 (40%), Positives = 61/104 (58%), Gaps = 4/104 (3%)
Frame = +2
Query: 173 LLEALDQ-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPG---MVVTFGPT 340
L+ A+D+ I +P R +DKP +P++DV+ I G GTV GRVE GVI +V P+
Sbjct: 193 LMNAVDESIPDPVRETDKPFLMPVEDVFTITGRGTVVTGRVERGVINVNEEVEIVGIRPS 252
Query: 341 GLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFVAS 472
T V VEM + L + GDNVG ++ V +D++RG V +
Sbjct: 253 TTKTTVTGVEMFRKLLDQGQAGDNVGLLLRGVKREDVERGQVVT 296
>L0371 L0371 COG0050 [J] GTPases - translation elongation factors
Length = 395
Score = 69.7 bits (169), Expect = 6e-12
Identities = 41/104 (39%), Positives = 62/104 (59%), Gaps = 6/104 (5%)
Frame = +2
Query: 173 LLEALDQ-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLT 349
L++ +D+ I P+R +DKPL LP++DV+ I G GTV GR+E G +K G V G+
Sbjct: 192 LMDIVDEYIPTPERDTDKPLLLPVEDVFSITGRGTVASGRIERGTVKVGDEVEI--VGIK 249
Query: 350 TEVK-----SVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFV 466
E K +EM ++L E L GDNVG ++ + +++RG V
Sbjct: 250 EETKKAVVTGIEMFRKTLTEGLAGDNVGALLRGIQRDEIERGQV 293
>SPY0611 SPy0611 COG0050 [J] GTPases - translation elongation
factors
Length = 398
Score = 69.3 bits (168), Expect = 8e-12
Identities = 54/195 (27%), Positives = 94/195 (47%), Gaps = 15/195 (7%)
Frame = +2
Query: 113 FEGDNM-IERSTNLDWYKGPT-----LLEALDQIN----EPKRPSDKPLRLPLQDVYKIG 262
F GD++ + + + L +G T ++E +D ++ EP+R +DKPL LP++DV+ I
Sbjct: 166 FPGDDLPVIQGSALKALEGDTKFEDIIMELMDTVDSYIPEPERDTDKPLLLPVEDVFSIT 225
Query: 263 GIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVK-----SVEMHHESLLEALPGDNVGFNV 427
G GTV GR++ G ++ + G+ E K VEM + L E L GDNVG +
Sbjct: 226 GRGTVASGRIDRGTVRVNDEIEI--VGIKEETKKAVVTGVEMFRKQLDEGLAGDNVGILL 283
Query: 428 KNVAVKDLKRGFVASNSKDDPAKEAANFTSXVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 607
+ V +++RG V +K F V I++ G + P + + +
Sbjct: 284 RGVQRDEIERGQVI--AKPSSINPHTKFKGEVYILSK--DEGGRHTPFFNNYRPQFYFRT 339
Query: 608 AELVTKIDRRSGXEI 652
++ I+ +G E+
Sbjct: 340 TDVTGSIELPAGTEM 354
>TUFB tufB COG0050 [J] GTPases - translation elongation factors
Length = 394
Score = 69.3 bits (168), Expect = 8e-12
Identities = 51/157 (32%), Positives = 76/157 (47%), Gaps = 4/157 (2%)
Frame = +2
Query: 194 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKS--- 364
I EP+R DKP LP++DV+ I G GTV GRVE G+IK G V G+ KS
Sbjct: 200 IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEI--VGIKETQKSTCT 257
Query: 365 -VEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSXVIIMNHP 541
VEM + L E G+NVG ++ + ++++RG V +K K F S V I++
Sbjct: 258 GVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVL--AKPGTIKPHTKFESEVYILSK- 314
Query: 542 GQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGXEI 652
G + P + + ++ I+ G E+
Sbjct: 315 -DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM 350
>TUFA tufA COG0050 [J] GTPases - translation elongation factors
Length = 394
Score = 69.3 bits (168), Expect = 8e-12
Identities = 51/157 (32%), Positives = 76/157 (47%), Gaps = 4/157 (2%)
Frame = +2
Query: 194 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKS--- 364
I EP+R DKP LP++DV+ I G GTV GRVE G+IK G V G+ KS
Sbjct: 200 IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEI--VGIKETQKSTCT 257
Query: 365 -VEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSXVIIMNHP 541
VEM + L E G+NVG ++ + ++++RG V +K K F S V I++
Sbjct: 258 GVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVL--AKPGTIKPHTKFESEVYILSK- 314
Query: 542 GQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGXEI 652
G + P + + ++ I+ G E+
Sbjct: 315 -DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM 350
>ZTUFB ZtufB COG0050 [J] GTPases - translation elongation factors
Length = 394
Score = 69.3 bits (168), Expect = 8e-12
Identities = 51/157 (32%), Positives = 76/157 (47%), Gaps = 4/157 (2%)
Frame = +2
Query: 194 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKS--- 364
I EP+R DKP LP++DV+ I G GTV GRVE G+IK G V G+ KS
Sbjct: 200 IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEI--VGIKETQKSTCT 257
Query: 365 -VEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSXVIIMNHP 541
VEM + L E G+NVG ++ + ++++RG V +K K F S V I++
Sbjct: 258 GVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVL--AKPGTIKPHTKFESEVYILSK- 314
Query: 542 GQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGXEI 652
G + P + + ++ I+ G E+
Sbjct: 315 -DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM 350
>ZTUFA ZtufA COG0050 [J] GTPases - translation elongation factors
Length = 394
Score = 69.3 bits (168), Expect = 8e-12
Identities = 51/157 (32%), Positives = 76/157 (47%), Gaps = 4/157 (2%)
Frame = +2
Query: 194 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKS--- 364
I EP+R DKP LP++DV+ I G GTV GRVE G+IK G V G+ KS
Sbjct: 200 IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEI--VGIKETQKSTCT 257
Query: 365 -VEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSXVIIMNHP 541
VEM + L E G+NVG ++ + ++++RG V +K K F S V I++
Sbjct: 258 GVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVL--AKPGTIKPHTKFESEVYILSK- 314
Query: 542 GQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGXEI 652
G + P + + ++ I+ G E+
Sbjct: 315 -DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM 350
>PM1746 PM1746 COG0050 [J] GTPases - translation elongation factors
Length = 394
Score = 68.2 bits (165), Expect = 2e-11
Identities = 51/179 (28%), Positives = 85/179 (46%), Gaps = 2/179 (1%)
Frame = +2
Query: 122 DNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETG 301
+ ++E + +LD Y I EP+R D+P LP++DV+ I G GTV GRVE G
Sbjct: 187 EKILELANHLDTY-----------IPEPQRAIDQPFLLPIEDVFSISGRGTVVTGRVERG 235
Query: 302 VIKPGMVVTFGPTGLTTE--VKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFVASN 475
+I+ G V TT+ V VEM + L E G+NVG ++ ++++RG V
Sbjct: 236 IIRTGEEVEIVGIKATTKTTVTGVEMFRKLLDEGRAGENVGALLRGTKREEIERGQVL-- 293
Query: 476 SKDDPAKEAANFTSXVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGXEI 652
+K +F S V +++ + G + P + + ++ I+ G E+
Sbjct: 294 AKPGSITPHTDFESEVYVLSK--EEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM 350
>PM1357 PM1357 COG0050 [J] GTPases - translation elongation factors
Length = 394
Score = 68.2 bits (165), Expect = 2e-11
Identities = 51/179 (28%), Positives = 85/179 (46%), Gaps = 2/179 (1%)
Frame = +2
Query: 122 DNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETG 301
+ ++E + +LD Y I EP+R D+P LP++DV+ I G GTV GRVE G
Sbjct: 187 EKILELANHLDTY-----------IPEPQRAIDQPFLLPIEDVFSISGRGTVVTGRVERG 235
Query: 302 VIKPGMVVTFGPTGLTTE--VKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFVASN 475
+I+ G V TT+ V VEM + L E G+NVG ++ ++++RG V
Sbjct: 236 IIRTGEEVEIVGIKATTKTTVTGVEMFRKLLDEGRAGENVGALLRGTKREEIERGQVL-- 293
Query: 476 SKDDPAKEAANFTSXVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGXEI 652
+K +F S V +++ + G + P + + ++ I+ G E+
Sbjct: 294 AKPGSITPHTDFESEVYVLSK--EEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM 350
>SLL1099 sll1099 COG0050 [J] GTPases - translation elongation
factors
Length = 399
Score = 68.2 bits (165), Expect = 2e-11
Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Frame = +2
Query: 173 LLEALDQ-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPG---MVVTFGPT 340
L++A+D I+ P+R DKP + ++DV+ I G GTV GR+E G +K G +V T
Sbjct: 192 LMKAVDDYIDTPEREVDKPFLMAVEDVFSITGRGTVATGRIERGKVKVGEEISIVGIKDT 251
Query: 341 GLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFV 466
T V VEM ++L E + GDNVG ++ + +D++RG V
Sbjct: 252 RKAT-VTGVEMFQKTLEEGMAGDNVGLLLRGIQKEDIERGMV 292
>CT322 CT322 COG0050 [J] GTPases - translation elongation factors
Length = 394
Score = 67.4 bits (163), Expect = 3e-11
Identities = 39/101 (38%), Positives = 57/101 (55%), Gaps = 3/101 (2%)
Frame = +2
Query: 173 LLEALDQ-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLT 349
L++A+D I P+R DKP +P++DV+ I G GTV GR+E G++K V T
Sbjct: 192 LMQAVDDNIPTPEREIDKPFLMPIEDVFSISGRGTVVTGRIERGIVKVSDKVQLVGLRDT 251
Query: 350 TE--VKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFV 466
E V VEM + L E G+NVG ++ + D++RG V
Sbjct: 252 KETIVTGVEMFRKELPEGRAGENVGLLLRGIGKNDVERGMV 292
>ML1877 ML1877 COG0050 [J] GTPases - translation elongation factors
Length = 396
Score = 67.4 bits (163), Expect = 3e-11
Identities = 42/109 (38%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Frame = +2
Query: 155 WYKGPT-LLEALDQ-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPG---M 319
W + T L++A+D+ I P R +DKP +P++DV+ I G GTV GRVE GV+
Sbjct: 186 WVESVTQLMDAVDESIPAPVRETDKPFLMPVEDVFTITGRGTVVTGRVERGVVNVNEEVE 245
Query: 320 VVTFGPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFV 466
+V T T V VEM + L + GDNVG ++ + +D++RG V
Sbjct: 246 IVGIRQTTTKTTVTGVEMFRKLLDQGQAGDNVGLLLRGIKREDVERGQV 294
>RP661 RP661 COG0050 [J] GTPases - translation elongation factors
Length = 394
Score = 67.0 bits (162), Expect = 4e-11
Identities = 46/125 (36%), Positives = 69/125 (54%), Gaps = 4/125 (3%)
Frame = +2
Query: 173 LLEALDQ-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPG---MVVTFGPT 340
L+ A+D I +P R +DKP +P++DV+ I G GTV GRVE+G+IK G +V T
Sbjct: 192 LMNAVDSYIPQPIRATDKPFLMPIEDVFSISGRGTVVTGRVESGIIKVGEEIEIVGLKNT 251
Query: 341 GLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSX 520
TT VEM + L E GDNVG ++ ++++RG V +K K F +
Sbjct: 252 QKTT-CTGVEMFRKLLDEGQSGDNVGILLRGTKREEVERGQVL--AKPGSIKPHDKFEAE 308
Query: 521 VIIMN 535
V +++
Sbjct: 309 VYVLS 313
>BU526 BU526 COG0050 [J] GTPases - translation elongation factors
Length = 423
Score = 67.0 bits (162), Expect = 4e-11
Identities = 48/155 (30%), Positives = 73/155 (46%), Gaps = 2/155 (1%)
Frame = +2
Query: 194 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEV--KSV 367
I EPKR D+P LP++DV+ I G GTV GRVE G+IK G V TT+ V
Sbjct: 229 IPEPKRAVDQPFLLPIEDVFSISGRGTVVTGRVEKGIIKVGEEVEIVGIKKTTKTTCTGV 288
Query: 368 EMHHESLLEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSXVIIMNHPGQ 547
EM + L E G+NVG ++ +++RG V +K F S V +++ +
Sbjct: 289 EMFRKLLDEGRAGENVGVLLRGTKRDEIERGQVL--AKPGSIHPHTTFESEVYVLSK--E 344
Query: 548 IGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGXEI 652
G + P + + ++ I+ G E+
Sbjct: 345 EGGRHTPFFKGYRPQFYFRTTDVTGSIELPEGIEM 379
>HI0632 HI0632 COG0050 [J] GTPases - translation elongation factors
Length = 394
Score = 66.6 bits (161), Expect = 5e-11
Identities = 51/180 (28%), Positives = 85/180 (46%), Gaps = 3/180 (1%)
Frame = +2
Query: 122 DNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETG 301
+ ++E + +LD Y I EP+R D+P LP++DV+ I G GTV GRVE G
Sbjct: 187 EKILELANHLDTY-----------IPEPERAIDQPFLLPIEDVFSISGRGTVVTGRVERG 235
Query: 302 VIKPG---MVVTFGPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFVAS 472
+I+ G +V T TT V VEM + L E G+N+G ++ ++++RG V
Sbjct: 236 IIRTGDEVEIVGIKDTAKTT-VTGVEMFRKLLDEGRAGENIGALLRGTKREEIERGQVL- 293
Query: 473 NSKDDPAKEAANFTSXVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGXEI 652
+K +F S V +++ G + P + + ++ I+ G E+
Sbjct: 294 -AKPGSITPHTDFESEVYVLSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM 350
>HI0578 HI0578 COG0050 [J] GTPases - translation elongation factors
Length = 394
Score = 66.6 bits (161), Expect = 5e-11
Identities = 51/180 (28%), Positives = 85/180 (46%), Gaps = 3/180 (1%)
Frame = +2
Query: 122 DNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETG 301
+ ++E + +LD Y I EP+R D+P LP++DV+ I G GTV GRVE G
Sbjct: 187 EKILELANHLDTY-----------IPEPERAIDQPFLLPIEDVFSISGRGTVVTGRVERG 235
Query: 302 VIKPG---MVVTFGPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFVAS 472
+I+ G +V T TT V VEM + L E G+N+G ++ ++++RG V
Sbjct: 236 IIRTGDEVEIVGIKDTAKTT-VTGVEMFRKLLDEGRAGENIGALLRGTKREEIERGQVL- 293
Query: 473 NSKDDPAKEAANFTSXVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGXEI 652
+K +F S V +++ G + P + + ++ I+ G E+
Sbjct: 294 -AKPGSITPHTDFESEVYVLSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM 350
>CJ0470 Cj0470 COG0050 [J] GTPases - translation elongation factors
Length = 399
Score = 66.6 bits (161), Expect = 5e-11
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 5/165 (3%)
Frame = +2
Query: 173 LLEALDQ-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGL- 346
L+ A+D I P R ++K +P++DV+ I G GTV GR+E GV+K G + G+
Sbjct: 197 LMAAVDSYIPTPTRDTEKDFLMPIEDVFSISGRGTVVTGRIEKGVVKVGDTIEI--VGIK 254
Query: 347 ---TTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTS 517
TT V VEM + + + GDNVG ++ +++ RG V + K +F +
Sbjct: 255 DTQTTTVTGVEMFRKEMDQGEAGDNVGVLLRGTKKEEVIRGMVLAKPKS--ITPHTDFEA 312
Query: 518 XVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGXEI 652
V I+N G + P + + V+ ++ I G E+
Sbjct: 313 EVYILNK--DEGGRHTPFFNNYRPQFYVRTTDVTGSIKLADGVEM 355
>MLR0288 mlr0288 COG0050 [J] GTPases - translation elongation
factors
Length = 391
Score = 65.9 bits (159), Expect = 9e-11
Identities = 43/116 (37%), Positives = 61/116 (52%), Gaps = 3/116 (2%)
Frame = +2
Query: 194 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPG---MVVTFGPTGLTTEVKS 364
I P RP DKP +P++DV+ I G GTV GRVE GV+K G ++ PT TT
Sbjct: 197 IPTPVRPLDKPFLMPIEDVFSISGRGTVVTGRVERGVVKVGEELEIIGIRPTTKTT-CTG 255
Query: 365 VEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSXVIIM 532
VEM + L + GDN+G ++ V + ++RG V +K K F + I+
Sbjct: 256 VEMFRKLLDQGQAGDNIGALLRGVDREGVERGQVL--AKPGTVKPHKKFVAEAYIL 309
>MLR0263 mlr0263 COG0050 [J] GTPases - translation elongation
factors
Length = 391
Score = 65.9 bits (159), Expect = 9e-11
Identities = 43/116 (37%), Positives = 61/116 (52%), Gaps = 3/116 (2%)
Frame = +2
Query: 194 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPG---MVVTFGPTGLTTEVKS 364
I P RP DKP +P++DV+ I G GTV GRVE GV+K G ++ PT TT
Sbjct: 197 IPTPVRPLDKPFLMPIEDVFSISGRGTVVTGRVERGVVKVGEELEIIGIRPTTKTT-CTG 255
Query: 365 VEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSXVIIM 532
VEM + L + GDN+G ++ V + ++RG V +K K F + I+
Sbjct: 256 VEMFRKLLDQGQAGDNIGALLRGVDREGVERGQVL--AKPGTVKPHKKFVAEAYIL 309
>VC2559 VC2559 COG2895 [P] GTPases - Sulfate adenylate transferase
subunit 1
Length = 476
Score = 65.9 bits (159), Expect = 9e-11
Identities = 45/161 (27%), Positives = 77/161 (46%), Gaps = 2/161 (1%)
Frame = +2
Query: 86 KVPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGG 265
++ +P+S EGDN++E+S +DWY+GP+LLE L+ ++ + S R P+Q V +
Sbjct: 198 EIQIIPLSALEGDNVVEKSRLMDWYQGPSLLELLEYVDIDRDKSSGAFRFPVQYVNRPNL 257
Query: 266 IGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVK 445
G + +GV+K G + P+G T+ V + L +A G V + +
Sbjct: 258 DFRGFAGTIASGVVKVGDKIKALPSGKTSTVTRIVTFDGDLPQAQAGLAVTLTLADEI-- 315
Query: 446 DLKRG--FVASNSKDDPAKEAANFTSXVIIMNHPGQIGNGY 562
D+ RG V +++ D V + P Q+G Y
Sbjct: 316 DISRGDLIVLESAQVDSTNHL--LADVVWMTEQPLQVGRDY 354
>CC3199 CC3199 COG0050 [J] GTPases - translation elongation factors
Length = 396
Score = 65.5 bits (158), Expect = 1e-10
Identities = 38/94 (40%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Frame = +2
Query: 194 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPG---MVVTFGPTGLTTEVKS 364
I +P+RP D P +P++DV+ I G GTV GRVE G++K G +V P TT
Sbjct: 202 IPQPERPVDMPFLMPVEDVFSISGRGTVVTGRVERGIVKVGEEVEIVGIRPVQKTT-CTG 260
Query: 365 VEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFV 466
VEM + L + GDNVG ++ +D++RG V
Sbjct: 261 VEMFRKLLDQGQAGDNVGVLLRGTKREDVERGQV 294
>CC1240 CC1240 COG0050 [J] GTPases - translation elongation factors
Length = 396
Score = 65.5 bits (158), Expect = 1e-10
Identities = 38/94 (40%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Frame = +2
Query: 194 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPG---MVVTFGPTGLTTEVKS 364
I +P+RP D P +P++DV+ I G GTV GRVE G++K G +V P TT
Sbjct: 202 IPQPERPVDMPFLMPVEDVFSISGRGTVVTGRVERGIVKVGEEVEIVGIRPVQKTT-CTG 260
Query: 365 VEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFV 466
VEM + L + GDNVG ++ +D++RG V
Sbjct: 261 VEMFRKLLDQGQAGDNVGVLLRGTKREDVERGQV 294
>BS_TUFA BS_tufA COG0050 [J] GTPases - translation elongation
factors
Length = 396
Score = 65.5 bits (158), Expect = 1e-10
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Frame = +2
Query: 173 LLEALDQ-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPG---MVVTFGPT 340
L++A+D+ I P+R ++KP +P++DV+ I G GTV GRVE G +K G ++
Sbjct: 193 LMDAVDEYIPTPERDTEKPFMMPVEDVFSITGRGTVATGRVERGQVKVGDEVEIIGLQEE 252
Query: 341 GLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFV 466
T V VEM + L A GDN+G ++ V+ ++++RG V
Sbjct: 253 NKKTTVTGVEMFRKLLDYAEAGDNIGALLRGVSREEIQRGQV 294
>TP0187 TP0187 COG0050 [J] GTPases - translation elongation factors
Length = 495
Score = 65.1 bits (157), Expect = 2e-10
Identities = 48/164 (29%), Positives = 80/164 (48%), Gaps = 4/164 (2%)
Frame = +2
Query: 173 LLEALDQ-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVI---KPGMVVTFGPT 340
LL A+D +P R +P L ++DVY I G GTV GR+E GVI + +V PT
Sbjct: 293 LLAAMDSYFEDPVRDDARPFLLSIEDVYTISGRGTVVTGRIECGVISLNEEVEIVGIKPT 352
Query: 341 GLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSX 520
T V +EM ++ L + + GDNVG ++ V K+++RG V SK K F +
Sbjct: 353 KKTV-VTGIEMFNKLLDQGIAGDNVGLLLRGVDKKEVERGQVL--SKPGSIKPHTKFEAQ 409
Query: 521 VIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGXEI 652
+ +++ + G ++P + + ++ I G ++
Sbjct: 410 IYVLSK--EEGGRHSPFFQGYRPQFYFRTTDITGTISLPEGVDM 451
>PA4277 PA4277 COG0050 [J] GTPases - translation elongation factors
Length = 397
Score = 65.1 bits (157), Expect = 2e-10
Identities = 45/124 (36%), Positives = 64/124 (51%), Gaps = 3/124 (2%)
Frame = +2
Query: 173 LLEALDQ-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLT 349
L+E LD I EP R D+P +P++DV+ I G GTV GRVE G+IK V T
Sbjct: 195 LVETLDSYIPEPVRAIDQPFLMPIEDVFSISGRGTVVTGRVERGIIKVQEEVEIVGIKAT 254
Query: 350 TEV--KSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSXV 523
T+ VEM + L E G+NVG ++ +D++RG V +K K F V
Sbjct: 255 TKTTCTGVEMFRKLLDEGRAGENVGILLRGTKREDVERGQVL--AKPGTIKPHTKFECEV 312
Query: 524 IIMN 535
+++
Sbjct: 313 YVLS 316
>PA4265 PA4265 COG0050 [J] GTPases - translation elongation factors
Length = 397
Score = 65.1 bits (157), Expect = 2e-10
Identities = 45/124 (36%), Positives = 64/124 (51%), Gaps = 3/124 (2%)
Frame = +2
Query: 173 LLEALDQ-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLT 349
L+E LD I EP R D+P +P++DV+ I G GTV GRVE G+IK V T
Sbjct: 195 LVETLDSYIPEPVRAIDQPFLMPIEDVFSISGRGTVVTGRVERGIIKVQEEVEIVGIKAT 254
Query: 350 TEV--KSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSXV 523
T+ VEM + L E G+NVG ++ +D++RG V +K K F V
Sbjct: 255 TKTTCTGVEMFRKLLDEGRAGENVGILLRGTKREDVERGQVL--AKPGTIKPHTKFECEV 312
Query: 524 IIMN 535
+++
Sbjct: 313 YVLS 316
>NMB0139 NMB0139 COG0050 [J] GTPases - translation elongation
factors
Length = 394
Score = 64.3 bits (155), Expect = 3e-10
Identities = 44/102 (43%), Positives = 56/102 (54%), Gaps = 4/102 (3%)
Frame = +2
Query: 173 LLEALDQ-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPG---MVVTFGPT 340
L ALD I P+R DKP LP++DV+ I G GTV GRVE G+I G +V T
Sbjct: 192 LAAALDSYIPTPERAVDKPFLLPIEDVFSISGRGTVVTGRVERGIIHVGDEIEIVGLKET 251
Query: 341 GLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFV 466
TT VEM + L E GDNVG ++ +D++RG V
Sbjct: 252 QKTT-CTGVEMFRKLLDEGQAGDNVGVLLRGTKREDVERGQV 292
>NMB0124 NMB0124 COG0050 [J] GTPases - translation elongation
factors
Length = 394
Score = 64.3 bits (155), Expect = 3e-10
Identities = 44/102 (43%), Positives = 56/102 (54%), Gaps = 4/102 (3%)
Frame = +2
Query: 173 LLEALDQ-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPG---MVVTFGPT 340
L ALD I P+R DKP LP++DV+ I G GTV GRVE G+I G +V T
Sbjct: 192 LAAALDSYIPTPERAVDKPFLLPIEDVFSISGRGTVVTGRVERGIIHVGDEIEIVGLKET 251
Query: 341 GLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFV 466
TT VEM + L E GDNVG ++ +D++RG V
Sbjct: 252 QKTT-CTGVEMFRKLLDEGQAGDNVGVLLRGTKREDVERGQV 292
>NMA0149 NMA0149 COG0050 [J] GTPases - translation elongation
factors
Length = 394
Score = 64.3 bits (155), Expect = 3e-10
Identities = 44/102 (43%), Positives = 56/102 (54%), Gaps = 4/102 (3%)
Frame = +2
Query: 173 LLEALDQ-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPG---MVVTFGPT 340
L ALD I P+R DKP LP++DV+ I G GTV GRVE G+I G +V T
Sbjct: 192 LAAALDSYIPTPERAVDKPFLLPIEDVFSISGRGTVVTGRVERGIIHVGDEIEIVGLKET 251
Query: 341 GLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFV 466
TT VEM + L E GDNVG ++ +D++RG V
Sbjct: 252 QKTT-CTGVEMFRKLLDEGQAGDNVGVLLRGTKREDVERGQV 292
>NMA0134 NMA0134 COG0050 [J] GTPases - translation elongation
factors
Length = 394
Score = 64.3 bits (155), Expect = 3e-10
Identities = 44/102 (43%), Positives = 56/102 (54%), Gaps = 4/102 (3%)
Frame = +2
Query: 173 LLEALDQ-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPG---MVVTFGPT 340
L ALD I P+R DKP LP++DV+ I G GTV GRVE G+I G +V T
Sbjct: 192 LAAALDSYIPTPERAVDKPFLLPIEDVFSISGRGTVVTGRVERGIIHVGDEIEIVGLKET 251
Query: 341 GLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFV 466
TT VEM + L E GDNVG ++ +D++RG V
Sbjct: 252 QKTT-CTGVEMFRKLLDEGQAGDNVGVLLRGTKREDVERGQV 292
>HP1205 HP1205 COG0050 [J] GTPases - translation elongation factors
Length = 399
Score = 64.3 bits (155), Expect = 3e-10
Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Frame = +2
Query: 194 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPG---MVVTFGPTGLTTEVKS 364
I P+R ++K +P++DV+ I G GTV GR+E GV+K G +V PT TT V
Sbjct: 205 IPTPERDTEKTFLMPVEDVFSIAGRGTVVTGRIERGVVKVGDEVEIVGIRPTQKTT-VTG 263
Query: 365 VEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFV 466
VEM + L + GDNVG ++ ++++RG V
Sbjct: 264 VEMFRKELEKGEAGDNVGVLLRGTKKEEVERGMV 297
>CDA8044 CDa8044 COG0050 [J] GTPases - translation elongation
factors
Length = 624
Score = 64.3 bits (155), Expect = 3e-10
Identities = 51/201 (25%), Positives = 102/201 (50%), Gaps = 12/201 (5%)
Frame = +2
Query: 86 KVPFVPISGFEGDNMIERSTNLD---WYKGPTLLEALD--QINEPKRPS--DKPLRLPLQ 244
++ F+PISG G+N+++R ++D WY GPTL E ++ +I+ R S +P L +
Sbjct: 374 QIDFIPISGLTGNNVVKRDLSVDSFKWYVGPTLAEYIEGVEIDAGSRDSLASEPFFLSVH 433
Query: 245 DVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHESLLEALPGD--NVG 418
DVYK G V G+V +GVI G + P+G + +V+S+++ + + A+ G+ +
Sbjct: 434 DVYKDKGELKVS-GKVSSGVISSGETIVALPSGESLQVQSLKVSKKPVDFAISGELAQIA 492
Query: 419 F---NVKNVAVKDLKRGFVASNSKDDPAKEAANFTSXVIIMNHPGQIGNGYAPVLDCHTS 589
F + N +V ++ G + + P K A + + N + G VL + +
Sbjct: 493 FKTSQISNESVDQIRIGDLIT-KPGSPVKTAHKLLVSLHLFNMDKPLLVGTPFVLFRNNT 551
Query: 590 HIAVKFAELVTKIDRRSGXEI 652
+ + +++V ++ + ++
Sbjct: 552 QVPARVSKIVEVVNGKKKKKV 572
>XF1501_1 XF1501_1 COG2895 [P] GTPases - Sulfate adenylate
transferase subunit 1
Length = 457
Score = 63.9 bits (154), Expect = 4e-10
Identities = 45/150 (30%), Positives = 73/150 (48%)
Frame = +2
Query: 86 KVPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGG 265
+V +P+S EGDN+ +RS + WY GP+LLE L+ + + LP+Q V +
Sbjct: 224 QVQCIPLSALEGDNLSKRSARMPWYVGPSLLEYLEALEPADVDLAAAMCLPVQWVNRPDS 283
Query: 266 IGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVK 445
G + G ++PG V P+G + V V + EA+ G V + +
Sbjct: 284 QFRGFTGTLAAGRVRPGDAVVVLPSGCVSRVVRVFNGDTEVHEAVAGQAVTLTLADEI-- 341
Query: 446 DLKRGFVASNSKDDPAKEAANFTSXVIIMN 535
D+ RG V + + DDP + A T+ V+ M+
Sbjct: 342 DISRGDVIA-ALDDPPEVADQVTAYVLWMD 370
>CYSN cysN COG2895 [P] GTPases - Sulfate adenylate transferase
subunit 1
Length = 475
Score = 63.2 bits (152), Expect = 6e-10
Identities = 38/114 (33%), Positives = 58/114 (50%), Gaps = 5/114 (4%)
Frame = +2
Query: 89 VPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYK---- 256
+ FVP+S EGDN+ +S ++ WY GPTLLE L+ + + +P+R P+Q V +
Sbjct: 200 IRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLD 259
Query: 257 -IGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHESLLEALPGDNV 415
G GT+ GRVE G V P+G+ + V + EA G+ +
Sbjct: 260 FRGYAGTLASGRVEV-----GQRVKVLPSGVESNVARIVTFDGDREEAFAGEAI 308
>ZCYSN ZcysN COG2895 [P] GTPases - Sulfate adenylate transferase
subunit 1
Length = 475
Score = 63.2 bits (152), Expect = 6e-10
Identities = 38/114 (33%), Positives = 58/114 (50%), Gaps = 5/114 (4%)
Frame = +2
Query: 89 VPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYK---- 256
+ FVP+S EGDN+ +S ++ WY GPTLLE L+ + + +P+R P+Q V +
Sbjct: 200 IRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLD 259
Query: 257 -IGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHESLLEALPGDNV 415
G GT+ GRVE G V P+G+ + V + EA G+ +
Sbjct: 260 FRGYAGTLASGRVEV-----GQRVKVLPSGVESNVARIVTFDGDREEAFAGEAI 308
>CC1482_1 CC1482_1 COG2895 [P] GTPases - Sulfate adenylate
transferase subunit 1
Length = 430
Score = 63.2 bits (152), Expect = 6e-10
Identities = 44/146 (30%), Positives = 73/146 (49%)
Frame = +2
Query: 98 VPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTV 277
+PISG GDNM RS W++GP L++ L+ + KP R+P+Q V +
Sbjct: 199 IPISGLGGDNMATRSDATPWFEGPILMDWLEAVEVEDDLQAKPFRMPVQWVNRPNLDFRG 258
Query: 278 PVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKR 457
G + +G IKPG + P+G + V + L +A+ G +V +++ D+ R
Sbjct: 259 FSGLIASGSIKPGDRIRALPSGRESRVARIVTLPGDLDQAVAGQSVTLTLEDEI--DISR 316
Query: 458 GFVASNSKDDPAKEAANFTSXVIIMN 535
G V + + D PA A F + ++ M+
Sbjct: 317 GDVIA-AADAPAPVANQFEATLVWMD 341
>BH0132 BH0132 COG0050 [J] GTPases - translation elongation factors
Length = 396
Score = 62.8 bits (151), Expect = 8e-10
Identities = 39/119 (32%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
Frame = +2
Query: 188 DQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPG---MVVTFGPTGLTTEV 358
D I P+R ++KP +P++DV+ I G GTV GRVE G + G ++ T V
Sbjct: 199 DYIPTPERDTEKPFMMPVEDVFSITGRGTVATGRVERGQLNVGDEVEIIGLEEEAKKTTV 258
Query: 359 KSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSXVIIMN 535
VEM + L A GDN+G ++ V+ ++++RG V +K NF + V +++
Sbjct: 259 TGVEMFRKLLDYAEAGDNIGALLRGVSREEVQRGQVL--AKPGTITPHTNFKAEVYVLS 315
>MLR7576_1 mlr7576_1 COG2895 [P] GTPases - Sulfate adenylate
transferase subunit 1
Length = 436
Score = 62.4 bits (150), Expect = 1e-09
Identities = 33/106 (31%), Positives = 55/106 (51%)
Frame = +2
Query: 98 VPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTV 277
+P+S GDN+ RS N+ WY GPTL+E L+ ++ + ++P R P+Q V +
Sbjct: 202 IPMSARYGDNVSGRSDNMQWYSGPTLIEHLETVSVEEAAVEQPFRFPVQYVNRPNLDFRG 261
Query: 278 PVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHESLLEALPGDNV 415
G + +G I G V +G ++ VK + H L +A+ G +
Sbjct: 262 FAGTIASGAIAQGDEVVVAKSGKSSHVKRIVAHGGDLKQAVAGQAI 307
>VC0362 VC0362 COG0050 [J] GTPases - translation elongation factors
Length = 394
Score = 61.6 bits (148), Expect = 2e-09
Identities = 49/165 (29%), Positives = 78/165 (46%), Gaps = 5/165 (3%)
Frame = +2
Query: 173 LLEALDQ-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLT 349
L EALD I EP+R D +P++DV+ I G GTV GR+E G++K G V G+
Sbjct: 192 LAEALDTYIPEPERAVDMAFLMPIEDVFSIQGRGTVVTGRIERGILKVGDEVAI--VGIK 249
Query: 350 TEVKS----VEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTS 517
VK+ VEM + L E G+NVG ++ ++++RG V +K F S
Sbjct: 250 ETVKTTCTGVEMFRKLLDEGRAGENVGALLRGTKREEVERGQVL--AKPGSITPHTKFES 307
Query: 518 XVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGXEI 652
V +++ G + P + + ++ I+ G E+
Sbjct: 308 EVYVLSK--DEGGRHTPFFKGYRPQFYFRTTDVTGSIELPEGVEM 350
>VC0321 VC0321 COG0050 [J] GTPases - translation elongation factors
Length = 394
Score = 61.6 bits (148), Expect = 2e-09
Identities = 49/165 (29%), Positives = 78/165 (46%), Gaps = 5/165 (3%)
Frame = +2
Query: 173 LLEALDQ-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLT 349
L EALD I EP+R D +P++DV+ I G GTV GR+E G++K G V G+
Sbjct: 192 LAEALDTYIPEPERAVDMAFLMPIEDVFSIQGRGTVVTGRIERGILKVGDEVAI--VGIK 249
Query: 350 TEVKS----VEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTS 517
VK+ VEM + L E G+NVG ++ ++++RG V +K F S
Sbjct: 250 ETVKTTCTGVEMFRKLLDEGRAGENVGALLRGTKREEVERGQVL--AKPGSITPHTKFES 307
Query: 518 XVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGXEI 652
V +++ G + P + + ++ I+ G E+
Sbjct: 308 EVYVLSK--DEGGRHTPFFKGYRPQFYFRTTDVTGSIELPEGVEM 350
>JHP1128 jhp1128 COG0050 [J] GTPases - translation elongation
factors
Length = 399
Score = 61.6 bits (148), Expect = 2e-09
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Frame = +2
Query: 173 LLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLT- 349
+ E I P+R ++K +P++DV+ I G GTV GR+E GV+K G V T
Sbjct: 198 MAEVDSYIPTPERDTEKTFLMPVEDVFSIAGRGTVVTGRIERGVVKVGDEVEIVGIRATQ 257
Query: 350 -TEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFV 466
T V VEM + L + GDNVG ++ ++++RG V
Sbjct: 258 KTTVTGVEMFRKELEKGEAGDNVGVLLRGTKKEEVERGMV 297
>MG451 MG451 COG0050 [J] GTPases - translation elongation factors
Length = 394
Score = 61.2 bits (147), Expect = 2e-09
Identities = 51/157 (32%), Positives = 73/157 (46%), Gaps = 11/157 (7%)
Frame = +2
Query: 173 LLEALDQ-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGL- 346
L++A+D+ I P R DKP L ++D I G GTV GRVE G +K G V GL
Sbjct: 192 LIKAVDEWIPTPTREVDKPFLLAIEDTMTITGRGTVVTGRVERGELKVGQEVEI--VGLK 249
Query: 347 ---TTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTS 517
V +EM + L A+ GDN G ++ V K+++RG V +K K F +
Sbjct: 250 PIRKAVVTGIEMFKKELDSAMAGDNAGVLLRGVERKEVERGQVL--AKPGSIKPHKKFKA 307
Query: 518 XVIIM------NHPGQIGNGYAPVLDCHTSHIAVKFA 610
+ + H G + NGY P T+ + A
Sbjct: 308 EIYALKKEEGGRHTGFL-NGYRPQFYFRTTDVTGSIA 343
>MPN665 MPN665 COG0050 [J] GTPases - translation elongation factors
Length = 394
Score = 60.5 bits (145), Expect = 4e-09
Identities = 49/152 (32%), Positives = 72/152 (47%), Gaps = 11/152 (7%)
Frame = +2
Query: 173 LLEALDQ-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGL- 346
L+ A+D+ I P+R DKP L ++D I G GTV GRVE G +K G + GL
Sbjct: 192 LMNAVDEWIPTPEREVDKPFLLAIEDTMTITGRGTVVTGRVERGELKVGQEIEI--VGLR 249
Query: 347 ---TTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTS 517
V +EM + L A+ GDN G ++ V K+++RG V +K K F +
Sbjct: 250 PIRKAVVTGIEMFKKELDSAMAGDNAGVLLRGVDRKEVERGQVL--AKPGSIKPHKKFKA 307
Query: 518 XVIIM------NHPGQIGNGYAPVLDCHTSHI 595
+ + H G + NGY P T+ +
Sbjct: 308 EIYALKKEEGGRHTGFL-NGYRPQFYFRTTDV 338
>NMA1364 NMA1364 COG2895 [P] GTPases - Sulfate adenylate
transferase subunit 1
Length = 428
Score = 60.1 bits (144), Expect = 5e-09
Identities = 59/212 (27%), Positives = 89/212 (41%), Gaps = 9/212 (4%)
Frame = +2
Query: 95 FVPISGFEGDNMIERSTNLDWYKGPTLLEALDQI---NEPKRPSDK---PLRLPL-QDVY 253
FVP+S GDN++ N+ WYKG LL L+ + +E R +D P++L + QD
Sbjct: 188 FVPVSALLGDNIVYPGGNMPWYKGEPLLSILETLPGADEVSRTADDFYFPVQLVVRQDAD 247
Query: 254 KIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKN 433
K GR+E G + G V P GLT EV + + +A G+ +
Sbjct: 248 KADDFRGYQ-GRIERGSVAVGQTVRIEPNGLTAEVSEIITPKGEVAQAFAGEAATLRLDR 306
Query: 434 VAVKDLKRG--FVASNSKDDPAKEAANFTSXVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 607
D+ RG FV NS P K + + +L T + K
Sbjct: 307 DI--DVSRGDLFVDKNSPLAPQKH----LEATLCWFDERPLNTARKYLLKHGTQTVPAKV 360
Query: 608 AELVTKIDRRSGXEIEAAPKFLKNGDAGLVKM 703
E+ + +D R+ E EA + LK D V++
Sbjct: 361 GEIESVLDVRT-LEQEAGAESLKMNDIAKVRI 391
>PA4442_1 PA4442_1 COG2895 [P] GTPases - Sulfate adenylate
transferase subunit 1
Length = 451
Score = 60.1 bits (144), Expect = 5e-09
Identities = 49/192 (25%), Positives = 87/192 (44%), Gaps = 5/192 (2%)
Frame = +2
Query: 95 FVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGT 274
FVP+S +GDN++ +S WY G +L+E L+ + + +R P+Q V +
Sbjct: 200 FVPMSALKGDNVVNKSERSPWYAGQSLMEILETVEIAADRNLDDMRFPVQYVNRPNLNFR 259
Query: 275 VPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLK 454
G + +GV++ G V P+G ++VKS+ L +A PG V +++ D+
Sbjct: 260 GFAGTLASGVVRKGDEVVALPSGKGSKVKSIVTFEGELEQAGPGQAVTLTLEDEI--DVS 317
Query: 455 RGFVASNSKDDPAKEAANFTSXVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKID- 631
RG + ++ + P V + P G Y + TS++ +V K+D
Sbjct: 318 RGDMLVHADNRPLVTDGFDAMLVWMAEEPMLPGKKYD--IKRATSYVPGSIPSIVHKVDV 375
Query: 632 ----RRSGXEIE 655
R G E++
Sbjct: 376 NTLERTPGSELK 387
>NMB1191 NMB1191 COG2895 [P] GTPases - Sulfate adenylate
transferase subunit 1
Length = 428
Score = 59.3 bits (142), Expect = 9e-09
Identities = 59/212 (27%), Positives = 89/212 (41%), Gaps = 9/212 (4%)
Frame = +2
Query: 95 FVPISGFEGDNMIERSTNLDWYKGPTLLEALDQI---NEPKRPSDK---PLRLPL-QDVY 253
FVP+S GDN++ N+ WYKG LL L+ + +E R +D P++L + QD
Sbjct: 188 FVPMSALLGDNIVYPGGNMPWYKGEPLLSILETLPGADEVSRTADDFYFPVQLVVRQDAD 247
Query: 254 KIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKN 433
K GR+E G + G V P GLT EV + + +A G+ +
Sbjct: 248 KADDFRGYQ-GRIERGSVAVGQTVRIEPNGLTAEVSEIITPKGEVAQAFAGEAATLRLDR 306
Query: 434 VAVKDLKRG--FVASNSKDDPAKEAANFTSXVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 607
D+ RG FV NS P K + + +L T + K
Sbjct: 307 DI--DVSRGDLFVDKNSPLAPQKH----LEATLCWFDERPLNTARKYLLKHGTQTVPAKV 360
Query: 608 AELVTKIDRRSGXEIEAAPKFLKNGDAGLVKM 703
E+ + +D R+ E EA + LK D V++
Sbjct: 361 GEIESVLDVRT-LEQEAGAESLKMNDIAKVRI 391
>NMB1153 NMB1153 COG2895 [P] GTPases - Sulfate adenylate
transferase subunit 1
Length = 428
Score = 59.3 bits (142), Expect = 9e-09
Identities = 59/212 (27%), Positives = 89/212 (41%), Gaps = 9/212 (4%)
Frame = +2
Query: 95 FVPISGFEGDNMIERSTNLDWYKGPTLLEALDQI---NEPKRPSDK---PLRLPL-QDVY 253
FVP+S GDN++ N+ WYKG LL L+ + +E R +D P++L + QD
Sbjct: 188 FVPMSALLGDNIVYPGGNMPWYKGEPLLSILETLPGADEVSRTADDFYFPVQLVVRQDAD 247
Query: 254 KIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKN 433
K GR+E G + G V P GLT EV + + +A G+ +
Sbjct: 248 KADDFRGYQ-GRIERGSVAVGQTVRIEPNGLTAEVSEIITPKGEVAQAFAGEAATLRLDR 306
Query: 434 VAVKDLKRG--FVASNSKDDPAKEAANFTSXVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 607
D+ RG FV NS P K + + +L T + K
Sbjct: 307 DI--DVSRGDLFVDKNSPLAPQKH----LEATLCWFDERPLNTARKYLLKHGTQTVPAKV 360
Query: 608 AELVTKIDRRSGXEIEAAPKFLKNGDAGLVKM 703
E+ + +D R+ E EA + LK D V++
Sbjct: 361 GEIESVLDVRT-LEQEAGAESLKMNDIAKVRI 391
>RV1286_1 Rv1286_1 COG2895 [P] GTPases - Sulfate adenylate
transferase subunit 1
Length = 425
Score = 57.8 bits (138), Expect = 3e-08
Identities = 48/192 (25%), Positives = 87/192 (45%), Gaps = 4/192 (2%)
Frame = +2
Query: 68 SRLQP*KVPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD 247
+RL V +PIS GDN++ +S WY+GP+LL L+ + + +R P+Q
Sbjct: 167 ARLDVQDVTSIPISALHGDNVVTKSDQTPWYEGPSLLSHLEDVYIAGDRNMVDVRFPVQY 226
Query: 248 VYKIGGIGTVP----VGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHESLLEALPGDNV 415
V + + G V +GV++ G V P G TT + +++ + + EA P +
Sbjct: 227 VIRPHTLEHQDHRSYAGTVASGVMRSGDEVVVLPIGKTTRITAIDGPNGPVAEAFP--PM 284
Query: 416 GFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSXVIIMNHPGQIGNGYAPVLDCHTSHI 595
+V+ D+ RG + + + + P + F + V M + G V+ T +
Sbjct: 285 AVSVRLADDIDISRGDMIARTHNQP-RITQEFDATVCWMADNAVLEPGRDYVVKHTTRTV 343
Query: 596 AVKFAELVTKID 631
+ A L ++D
Sbjct: 344 RARIAGLDYRLD 355
>MJ0325 MJ0325 COG0050 [J] GTPases - translation elongation factors
Length = 308
Score = 57.8 bits (138), Expect = 3e-08
Identities = 27/91 (29%), Positives = 50/91 (54%)
Frame = +2
Query: 227 LRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHESLLEALPG 406
+++P+ + + +GTV +G+VE+G ++ + PT V+S+++H EA G
Sbjct: 143 VKIPIDHYFTVRSVGTVILGKVESGTVRVHDNLRVYPTDKMAMVRSIQIHDNDFKEAKAG 202
Query: 407 DNVGFNVKNVAVKDLKRGFVASNSKDDPAKE 499
+ VG +K + +L RG + SN + AKE
Sbjct: 203 NRVGLALKGITTDELDRGMILSNGELKVAKE 233
>AQ_1033 aq_1033 COG3276 [J] Selenocysteine-specific translation
elongation factor
Length = 582
Score = 55.1 bits (131), Expect = 2e-07
Identities = 30/98 (30%), Positives = 53/98 (53%)
Frame = +2
Query: 173 LLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTT 352
LLE+++ +N+ KPLR+ + + + G GTV G G +K G V P G+ +
Sbjct: 167 LLESINNLNK-----HKPLRIFVDSAFVVKGYGTVLRGSCFEGEVKEGDKVVVEPIGVIS 221
Query: 353 EVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFV 466
V+ ++ H + +A+ G+ + N+ V K +KRGF+
Sbjct: 222 RVRKMQNHGVFVKKAVAGERIALNLPEVDAKKVKRGFL 259
>MJ0495 MJ0495 COG0050 [J] GTPases - translation elongation factors
Length = 469
Score = 53.9 bits (128), Expect = 4e-07
Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 2/174 (1%)
Frame = +2
Query: 173 LLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTT 352
LL++LD KR + L++P+ +KI G+GTV G + G ++ G + P
Sbjct: 176 LLDSLDI----KRDINSYLKMPIDHAFKIKGVGTVVTGTIHKGKVEVGDNLRILPINHEV 231
Query: 353 EVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSXVIIM 532
+VKS++ + + A GD VG + V + L RG + + S+D K F + V I+
Sbjct: 232 KVKSIQCFKQDVSIAYAGDRVGMALMGVEPESLFRGCILT-SEDTKLKVVDKFIAKVKIL 290
Query: 533 NHPGQIGNGYAPVLDCHTS--HIAVKFAELVTKIDRRSGXEIEAAPKFLKNGDA 688
AP + H + + V + KI++ + E + +K GD+
Sbjct: 291 E---LFKYNLAPKMKVHINIGLLTVPATIIPYKIEKINDKEEPIILEEIKGGDS 341
>TVN0359 TVN0359 COG0050 [J] GTPases - translation elongation
factors
Length = 299
Score = 51.6 bits (122), Expect = 2e-06
Identities = 29/96 (30%), Positives = 55/96 (57%)
Frame = +2
Query: 173 LLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTT 352
+++ L +IN P R DKPL + + +K+ +GTV +G V +G++K +
Sbjct: 123 IVDLLKKIN-PVRKKDKPL-VVIDHYFKVKSVGTVVLGFVLSGIVKKHDDLYLSEVNRQV 180
Query: 353 EVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRG 460
+++S++++ + EA G VG ++NV V++L RG
Sbjct: 181 QIRSIQVNDVDVDEAEAGTRVGLALRNVEVEELSRG 216
>BU423 BU423 COG2895 [P] GTPases - Sulfate adenylate transferase
subunit 1
Length = 473
Score = 50.8 bits (120), Expect = 3e-06
Identities = 36/138 (26%), Positives = 68/138 (49%), Gaps = 2/138 (1%)
Frame = +2
Query: 95 FVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGT 274
F+P+S G+N++ ++ + WY+G TLL L+ I S + LR P+Q + +
Sbjct: 196 FIPMSALLGENIVFKTKLMPWYQGVTLLSFLETIKIKNSISSEELRFPVQYINRPNSDFR 255
Query: 275 VPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLK 454
G + +G + G + P + + V + + L +A G+++ +K+ D+
Sbjct: 256 GYSGILLSGRMHVGQTIKILPENINSRVSRIVTFDKELKKAEIGESITVVLKDEI--DIN 313
Query: 455 RG--FVASNSKDDPAKEA 502
RG FV +S P++EA
Sbjct: 314 RGDFFVNIDSILQPSQEA 331
>YKR084C YKR084c COG0050 [J] GTPases - translation elongation
factors
Length = 611
Score = 45.4 bits (106), Expect = 1e-04
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 20/149 (13%)
Frame = +2
Query: 89 VPFVPISGFEGDNM--IERSTNL-DWYKGPTLLEALDQI-------NEPKRPSDKPLRLP 238
+ +VPISGF G+ + IE + + WY GP L+ L+ NE D L
Sbjct: 346 INWVPISGFSGEGVYKIEYTDEVRQWYNGPNLMSTLENAAFKISKENEGINKDDPFLFSV 405
Query: 239 LQDV--YKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEM--------HHESL 388
L+ + K + G++E+G I+PG +T P+ + V +++ +HE
Sbjct: 406 LEIIPSKKTSNDLALVSGKLESGSIQPGESLTIYPSEQSCIVDKIQVGSQQGQSTNHEET 465
Query: 389 LEALPGDNVGFNVKNVAVKDLKRGFVASN 475
A+ GD V ++ +D++ G +A++
Sbjct: 466 DVAIKGDFVTLKLRKAYPEDIQNGDLAAS 494
>AQ_1725 aq_1725 COG0481 [N] Membrane GTPase LepA
Length = 600
Score = 38.5 bits (88), Expect = 0.016
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 4/113 (3%)
Frame = +2
Query: 173 LLEAL-DQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLT 349
+LEA+ ++I PK KPL+ + D Y G V R+ G +KPG + TG
Sbjct: 174 ILEAIVNRIPPPKGDPQKPLKALIFDSYYDPYRGAVAFVRIFDGEVKPGDKIMLMSTGKE 233
Query: 350 TEVKSVEMHHESL--LEALPGDNVGFNVKNVA-VKDLKRGFVASNSKDDPAKE 499
EV V + + L +VG+ ++ V+D++ G +++K +P KE
Sbjct: 234 YEVTEVGAQTPKMTKFDKLSAGDVGYIAASIKDVRDIRIGDTITHAK-NPTKE 285
>PH1706 PH1706 COG0050 [J] GTPases - translation elongation factors
Length = 411
Score = 35.4 bits (80), Expect = 0.13
Identities = 40/136 (29%), Positives = 63/136 (45%), Gaps = 23/136 (16%)
Frame = +2
Query: 92 PFVPISGFEGDNMIERSTNLDWYKGPTLLEAL-DQINEPKRPSDKP---LRLPLQDVYK- 256
P +PIS G N+ L++A+ D I PKR +KP L L DV K
Sbjct: 176 PIIPISALHGANI------------DVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKP 223
Query: 257 -------IGGI--GTVPVGRVETG---VIKPGMV------VTFGPTGLTTEVKSVEMHHE 382
+GG+ G++ G+++ G I+PG+ + + P +TTE+ S++ +
Sbjct: 224 GTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGIPYEEHGRIRYEP--ITTEIVSLQAGGQ 281
Query: 383 SLLEALPGDNVGFNVK 430
+ EA PG VG K
Sbjct: 282 FVEEAYPGGLVGVGTK 297
>PAB2040 PAB2040 COG0050 [J] GTPases - translation elongation
factors
Length = 411
Score = 35.4 bits (80), Expect = 0.13
Identities = 40/136 (29%), Positives = 63/136 (45%), Gaps = 23/136 (16%)
Frame = +2
Query: 92 PFVPISGFEGDNMIERSTNLDWYKGPTLLEAL-DQINEPKRPSDKP---LRLPLQDVYK- 256
P +PIS G N+ L++A+ D I PKR +KP L L DV K
Sbjct: 176 PIIPISALHGANI------------DVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKP 223
Query: 257 -------IGGI--GTVPVGRVETG---VIKPGMV------VTFGPTGLTTEVKSVEMHHE 382
+GG+ G++ G+++ G I+PG+ + + P +TTE+ S++ +
Sbjct: 224 GTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEP--ITTEIVSLQAGGQ 281
Query: 383 SLLEALPGDNVGFNVK 430
+ EA PG VG K
Sbjct: 282 FVEEAYPGGLVGVGTK 297
>HI0709 HI0709 COG3276 [J] Selenocysteine-specific translation
elongation factor
Length = 619
Score = 34.7 bits (78), Expect = 0.23
Identities = 36/161 (22%), Positives = 66/161 (40%), Gaps = 4/161 (2%)
Frame = +2
Query: 215 SDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHESLLE 394
+ KP R + V+ + G GTV G +G +K + + TG +K++ + S +
Sbjct: 167 TQKPFRYAIDRVFSVKGAGTVVTGTAFSGTVKVNDEI-YLSTGQKIRIKAIHAQNTSSEQ 225
Query: 395 ALPGDNVGFNVK-NVAVKDLKRG-FVASNSKDDPAKEAANFTSXVIIMN--HPGQIGNGY 562
+ G + N+ ++ +KRG ++ N P + + +N P I +G
Sbjct: 226 GIAGQRLALNLNADLDRTPMKRGDWLLQNEPLPPTDRISVQILAEVPLNESQPVHIYHGA 285
Query: 563 APVLDCHTSHIAVKFAELVTKIDRRSGXEIEAAPKFLKNGD 685
+ T + + + K DR I +P FL GD
Sbjct: 286 SRT----TGKLTLLQGKNAAKNDRTLAEIILDSPLFLAFGD 322
>VC2744 VC2744 COG1217 [N] Predicted membrane GTPase involved in
stress response
Length = 609
Score = 33.5 bits (75), Expect = 0.51
Identities = 15/54 (27%), Positives = 27/54 (49%)
Frame = +2
Query: 167 PTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVT 328
P +D + P+ D PL++ + + +G + VGR++ G +KP VT
Sbjct: 189 PLFQAIVDNVAAPQVDLDGPLQMQISQLDYSSYVGVIGVGRIKRGKVKPNQQVT 242
>HI0864 HI0864 COG1217 [N] Predicted membrane GTPase involved in
stress response
Length = 616
Score = 33.5 bits (75), Expect = 0.51
Identities = 18/75 (24%), Positives = 34/75 (45%)
Frame = +2
Query: 104 ISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPV 283
++G E +++ E T P + + PK D P ++ + + +G + +
Sbjct: 177 VAGLEHEDLAEDMT-------PLFEAIVKHVEPPKVELDAPFQMQISQLDYNNYVGVIGI 229
Query: 284 GRVETGVIKPGMVVT 328
GR++ G IKP VT
Sbjct: 230 GRIKRGSIKPNQPVT 244
>PM1173 PM1173 COG1217 [N] Predicted membrane GTPase involved in
stress response
Length = 616
Score = 33.1 bits (74), Expect = 0.66
Identities = 16/75 (21%), Positives = 35/75 (46%)
Frame = +2
Query: 104 ISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPV 283
++G E D++ E T P + + PK ++P ++ + + +G + +
Sbjct: 177 VAGLEHDDLAEDMT-------PLFEAIVKHVEPPKVELEQPFQMQISQLDYNSYVGVIGI 229
Query: 284 GRVETGVIKPGMVVT 328
GR++ G +KP V+
Sbjct: 230 GRIKRGSVKPNQTVS 244
>ZYIHK ZyihK COG1217 [N] Predicted membrane GTPase involved in
stress response
Length = 607
Score = 32.7 bits (73), Expect = 0.87
Identities = 18/75 (24%), Positives = 34/75 (45%)
Frame = +2
Query: 104 ISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPV 283
I+G + ++M E T P +D + P D P ++ + + +G + +
Sbjct: 171 IAGLDHEDMAEDMT-------PLYQAIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGI 223
Query: 284 GRVETGVIKPGMVVT 328
GR++ G +KP VT
Sbjct: 224 GRIKRGKVKPNQQVT 238
>TYPA typA COG1217 [N] Predicted membrane GTPase involved in stress
response
Length = 591
Score = 32.7 bits (73), Expect = 0.87
Identities = 18/75 (24%), Positives = 34/75 (45%)
Frame = +2
Query: 104 ISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPV 283
I+G + ++M E T P +D + P D P ++ + + +G + +
Sbjct: 171 IAGLDHEDMAEDMT-------PLYQAIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGI 223
Query: 284 GRVETGVIKPGMVVT 328
GR++ G +KP VT
Sbjct: 224 GRIKRGKVKPNQQVT 238
>AF0592 AF0592 COG0050 [J] GTPases - translation elongation factors
Length = 424
Score = 32.3 bits (72), Expect = 1.1
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 18/131 (13%)
Frame = +2
Query: 92 PFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQ-INEPKRPSDKPLRLPLQ---DVYK- 256
P +PIS ++ N+D L+EA+++ I P+R D P + + DV K
Sbjct: 193 PIIPISA-------QQKVNMD-----ALIEAIEETIPTPERDLDSPPLMHVARSFDVNKP 240
Query: 257 -------IGGI--GTVPVGRVETG---VIKPGMVVTFGPTG-LTTEVKSVEMHHESLLEA 397
+GG+ G++ GR+ G I+PG+ G L TEV+S+ + EA
Sbjct: 241 GTPPEKLLGGVLGGSLSRGRIRVGDEIEIRPGVKDERGNWNPLFTEVQSIVASGRFVDEA 300
Query: 398 LPGDNVGFNVK 430
PG VG K
Sbjct: 301 TPGGLVGIATK 311
>BS_RPLA BS_rplA COG0081 [J] Ribosomal protein L1
Length = 232
Score = 30.8 bits (68), Expect = 3.3
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +2
Query: 266 IGTVPVGRVETGVIKPGMV-VTFGPTGLTTE--VKSVEMHHESLLEALPGDNVGFNVKNV 436
IG + G+VE V K G + V G E V++ ++++L+A P G VKNV
Sbjct: 153 IGEIKAGKVEYRVDKAGNIHVPIGKVSFEDEKLVENFTTMYDTILKAKPAAAKGVYVKNV 212
Query: 437 AV 442
AV
Sbjct: 213 AV 214
>PM1766 PM1766 COG3276 [J] Selenocysteine-specific translation
elongation factor
Length = 624
Score = 30.8 bits (68), Expect = 3.3
Identities = 16/71 (22%), Positives = 33/71 (45%)
Frame = +2
Query: 215 SDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHESLLE 394
S+KP R + V+ + G+GTV G +G ++ + G T +K++ ++
Sbjct: 172 SNKPFRYAIDRVFSVKGVGTVVTGTAFSGRVQIDDELLLS-NGQTVRIKNIHSQNQQTNV 230
Query: 395 ALPGDNVGFNV 427
G+ + N+
Sbjct: 231 GNAGERLALNL 241
>SPY1527 SPy1527 COG1217 [N] Predicted membrane GTPase involved in
stress response
Length = 613
Score = 30.4 bits (67), Expect = 4.3
Identities = 18/57 (31%), Positives = 28/57 (48%)
Frame = +2
Query: 185 LDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTE 355
+D I P SD+PL+ + + +G + +GRV G +K G VT TT+
Sbjct: 196 IDHIPAPVDNSDEPLQFQVSLLDYNDFVGRIGIGRVFRGTVKVGDQVTLSKLDGTTK 252
>NMA1370 NMA1370 COG1217 [N] Predicted membrane GTPase involved in
stress response
Length = 603
Score = 30.4 bits (67), Expect = 4.3
Identities = 22/78 (28%), Positives = 34/78 (43%)
Frame = +2
Query: 92 PFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIG 271
P V SG G +E + + + P L P +D+ L+L + + G
Sbjct: 160 PIVYASGLSGFAKLEETDESNDMR-PLFDTILKYTPAPSGSADETLQLQISQLDYDNYTG 218
Query: 272 TVPVGRVETGVIKPGMVV 325
+ +GR+ G IKPG VV
Sbjct: 219 RLGIGRILNGRIKPGQVV 236
>BS_LEPA BS_lepA COG0481 [N] Membrane GTPase LepA
Length = 612
Score = 30.0 bits (66), Expect = 5.6
Identities = 38/118 (32%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Frame = +2
Query: 179 EALDQINE----PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGL 346
E L+QI E P + PL+ + D G V RV G +KPG + TG
Sbjct: 181 EILEQIVEKVPAPTGDPEAPLKALIFDSLYDAYRGVVAYIRVVEGTVKPGQKIKMMATGK 240
Query: 347 TTEVKSVEMHHESLL---EALPGDNVGF---NVKNVAVKDLKRGFVASNSKDDPAKEA 502
EV V + E GD VGF ++KNV D + G + S +PA+EA
Sbjct: 241 EFEVTEVGVFTPKATPTNELTVGD-VGFLTASIKNVG--DTRVGDTIT-SAANPAEEA 294
>MLR4536 mlr4536 COG0481 [N] Membrane GTPase LepA
Length = 601
Score = 30.0 bits (66), Expect = 5.6
Identities = 30/120 (25%), Positives = 48/120 (40%), Gaps = 5/120 (4%)
Frame = +2
Query: 167 PTLLEALDQINEPKRPSDK--PLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPT 340
P +LEA+ P R D PL+ L D + +G + + R+ GV+K G + T
Sbjct: 174 PDVLEAIVHQLPPPREGDATAPLKAMLVDSWYDAYLGVIVLVRIIDGVLKKGQTIRMMGT 233
Query: 341 GLTTEVKSVEMHHESLL---EALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANF 511
G V+ + + + E PG+ F V D + G + K A+ F
Sbjct: 234 GAKYLVERTGVFTPARINVDELGPGEFGFFTGSIKEVADTRVGDTITEDKRPTAQALPGF 293
>BH1342 BH1342 COG0481 [N] Membrane GTPase LepA
Length = 609
Score = 29.6 bits (65), Expect = 7.3
Identities = 35/116 (30%), Positives = 49/116 (42%), Gaps = 12/116 (10%)
Frame = +2
Query: 179 EALDQINE----PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGL 346
E L+QI E P + PL+ + D G V R+ G +KPG + TG
Sbjct: 180 EILEQIVEKVPAPSGDPEGPLKALIFDSLYDSYRGVVAYIRIVEGSVKPGQKIKMMATGK 239
Query: 347 TTEVKSVEMH--HESLLEALPGDNVGF---NVKNVAVKDLKRGFV---ASNSKDDP 490
EV V + E L +VGF ++KNV D + G A+N D+P
Sbjct: 240 EFEVTEVGVFTPKPEKREELTVGDVGFLTASIKNVG--DTRVGDTITSANNPADEP 293
>SPY1053 SPy1053 COG0481 [N] Membrane GTPase LepA
Length = 610
Score = 29.6 bits (65), Expect = 7.3
Identities = 31/115 (26%), Positives = 52/115 (44%), Gaps = 7/115 (6%)
Frame = +2
Query: 179 EALDQINE----PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGL 346
E L+QI E P D PL+ + D G + R+ G++KPG + G
Sbjct: 180 EILEQIVEKVPAPTGDVDAPLQALIFDSVYDAYRGVILQVRIVNGIVKPGDKIQMMSNGK 239
Query: 347 TTEVKSVEMHHESLL--EALPGDNVGFNVKNV-AVKDLKRGFVASNSKDDPAKEA 502
T +V V + + + L +VG+ ++ V D + G + + ++PAKEA
Sbjct: 240 TFDVTEVGIFTPKAVGRDFLATGDVGYVAASIKTVADTRVGDTVTLA-NNPAKEA 293
Database: COGs
Posted date: Jan 30, 2002 4:01 PM
Number of letters in database: 26,228,252
Number of sequences in database: 78,847
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41574705
Number of Sequences: 78847
Number of extensions: 865210
Number of successful extensions: 2701
Number of sequences better than 10.0: 206
Number of HSP's better than 10.0 without gapping: 2523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2613
length of query: 298
length of database: 26,228,252
effective HSP length: 49
effective length of query: 248
effective length of database: 22,364,749
effective search space: 5546457752
effective search space used: 5546457752
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)