BLASTX 2.1.3 [Apr-1-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
/home/local/jxu/web/Fgr/NCPvsCOGs/blast/0941_H02_O03ZS5.seq
(882 letters)
Database: COGs
78,847 sequences; 26,228,252 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
RV1448C Rv1448c COG0176 [G] Transaldolase 104 4e-35
ML0582 ML0582 COG0176 [G] Transaldolase 103 3e-31
NMB0351 NMB0351 COG0176 [G] Transaldolase 73 3e-22
NMA2136 NMA2136 COG0176 [G] Transaldolase 72 1e-21
CJ0281C Cj0281c COG0176 [G] Transaldolase 56 1e-15
JHP1388 jhp1388 COG0176 [G] Transaldolase 53 6e-14
HP1495 HP1495 COG0176 [G] Transaldolase 52 1e-13
PM1602 PM1602 COG0176 [G] Transaldolase 44 3e-04
MJ0960 MJ0960 COG0176 [G] Transaldolase 43 6e-04
PM1639 PM1639 COG0176 [G] Transaldolase 43 8e-04
YLR354C YLR354c COG0176 [G] Transaldolase 42 0.001
BH3785 BH3785 COG0176 [G] Transaldolase 41 0.002
SPY1947 SPy1947 COG0176 [G] Transaldolase 41 0.003
HI1125 HI1125 COG0176 [G] Transaldolase 40 0.004
TALC talC COG0176 [G] Transaldolase 40 0.004
ZTALC ZtalC COG0176 [G] Transaldolase 40 0.004
TALB talB COG0176 [G] Transaldolase 40 0.005
ZTALB ZtalB COG0176 [G] Transaldolase 40 0.005
BS_YWJH BS_ywjH COG0176 [G] Transaldolase 40 0.007
BU093 BU093 COG0176 [G] Transaldolase 40 0.007
TM0295 TM0295 COG0176 [G] Transaldolase 39 0.009
TALA talA COG0176 [G] Transaldolase 39 0.012
ZTALA ZtalA COG0176 [G] Transaldolase 39 0.012
VCA0623 VCA0623 COG0176 [G] Transaldolase 38 0.020
PA2796 PA2796 COG0176 [G] Transaldolase 38 0.026
CPN0083 CPn0083 COG0176 [G] Transaldolase 36 0.077
AQ_119 aq_119 COG0176 [G] Transaldolase 35 0.13
SLR1793 slr1793 COG0176 [G] Transaldolase 35 0.13
YGR043C YGR043c COG0176 [G] Transaldolase 35 0.13
CT313 CT313 COG0176 [G] Transaldolase 35 0.17
TVN0666 TVN0666 COG0176 [G] Transaldolase 35 0.22
SPY1678 SPy1678 COG0176 [G] Transaldolase 34 0.29
MIPB mipB COG0176 [G] Transaldolase 34 0.29
CDA4536 CDa4536 COG0176 [G] Transaldolase 34 0.29
SPY2048 SPy2048 COG0176 [G] Transaldolase 34 0.29
TA0616 Ta0616 COG0176 [G] Transaldolase 33 0.85
DR1337 DR1337 COG0176 [G] Transaldolase 31 2.5
HP0054_2 HP0054_2 COG0827 [L] Adenine-specific DNA methylase 29 9.4
CT241 CT241 COG0729 [M] Predicted outer membrane protein 29 9.4
>RV1448C Rv1448c COG0176 [G] Transaldolase
Length = 373
Score = 104 bits (260), Expect(2) = 4e-35
Identities = 55/99 (55%), Positives = 75/99 (75%), Gaps = 2/99 (2%)
Frame = +3
Query: 570 EVSPKLANDTQGTVEAAKWLHKVVNRPNVYIKIPATAECVPSIKEVIANGISVNVTLIFS 749
EV P+LA++T+ T++ A L K+V+RPN++IKIPAT +P+I V+A GISVNVTLIFS
Sbjct: 112 EVDPRLAHETEKTIQQAIELWKIVDRPNLFIKIPATKAGLPAISAVLAEGISVNVTLIFS 171
Query: 750 VARYEAVIDAYLDGLEASGLS--DLSRVTSVGSFFVSRL 860
V RY V+DAYL G+E + + LS++ SV SFFVSR+
Sbjct: 172 VQRYREVMDAYLTGMEKARQAGHSLSKIHSVASFFVSRV 210
Score = 63.2 bits (152), Expect(2) = 4e-35
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Frame = +2
Query: 290 GQSPWYDNLCRP------VTDLLPYIANGVRGVTSNPTIFQKAISSSNAYDGQFKELISA 451
G S W D+L R + +L+ V GVT+NP+IFQKA+S + YD Q EL +
Sbjct: 15 GVSVWLDDLSRDRLRSGNLQELID--TKSVVGVTTNPSIFQKALSEGHTYDAQIAELAAR 72
Query: 452 GKDAESAYWELVIKDIQDACKLFEPIYDETDGAD 553
G D ++ + D++ AC + P ++++DG D
Sbjct: 73 GADVDATIRTVTTDDVRSACDVLVPQWEDSDGVD 106
>ML0582 ML0582 COG0176 [G] Transaldolase
Length = 375
Score = 103 bits (258), Expect(2) = 3e-31
Identities = 56/99 (56%), Positives = 72/99 (72%), Gaps = 2/99 (2%)
Frame = +3
Query: 570 EVSPKLANDTQGTVEAAKWLHKVVNRPNVYIKIPATAECVPSIKEVIANGISVNVTLIFS 749
EV P+LA+DT T+ A L ++V+ PN++IKIPAT +P+I V+A GISVNVTLIFS
Sbjct: 114 EVDPRLAHDTDKTIAQAVELWRIVDHPNLFIKIPATKAGLPAITAVLAEGISVNVTLIFS 173
Query: 750 VARYEAVIDAYLDGLE--ASGLSDLSRVTSVGSFFVSRL 860
V R+ VIDAYL G+E A DLS++ SV SFFVSR+
Sbjct: 174 VQRHREVIDAYLAGIEKAAEAGRDLSKIVSVASFFVSRV 212
Score = 50.8 bits (120), Expect(2) = 3e-31
Identities = 31/92 (33%), Positives = 47/92 (50%), Gaps = 4/92 (4%)
Frame = +2
Query: 290 GQSPWYDNLCRPVT---DLLPYI-ANGVRGVTSNPTIFQKAISSSNAYDGQFKELISAGK 457
G S W D+L R +L I V GVT+NP+IFQKA ++ +AYD Q EL G
Sbjct: 17 GVSVWLDDLSRDRLQSGNLQKLIDTKSVVGVTTNPSIFQKAFANGHAYDAQIAELAKRGA 76
Query: 458 DAESAYWELVIKDIQDACKLFEPIYDETDGAD 553
+ + + D++ AC + ++ + G D
Sbjct: 77 NVDVTVRTVTTDDVRHACDVLACEWEASHGKD 108
>NMB0351 NMB0351 COG0176 [G] Transaldolase
Length = 351
Score = 72.8 bits (177), Expect(2) = 3e-22
Identities = 41/100 (41%), Positives = 65/100 (65%), Gaps = 3/100 (3%)
Frame = +3
Query: 570 EVSPKLANDTQGTVEAAKWLHKVVNRPNVYIKIPATAECVPSIKEVIANGISVNVTLIFS 749
EVSP+L+ D QGTVE A+ L+ + N IK+PAT + +++ ++++GISVN+TL+FS
Sbjct: 107 EVSPELSKDAQGTVEEARRLYAAIGCKNAMIKVPATDAGIDALETLVSDGISVNLTLLFS 166
Query: 750 VARYEAVIDAYLDGLE---ASGLSDLSRVTSVGSFFVSRL 860
A+ AY G+ A+G S ++ + V SFF+SR+
Sbjct: 167 RAQTLKAYAAYARGIAKRLAAGQS-VAHIQVVASFFISRV 205
Score = 52.0 bits (123), Expect(2) = 3e-22
Identities = 29/89 (32%), Positives = 42/89 (46%), Gaps = 3/89 (3%)
Frame = +2
Query: 290 GQSPWYDNLCRPVT---DLLPYIANGVRGVTSNPTIFQKAISSSNAYDGQFKELISAGKD 460
GQ W DNL R + +L + GV GVTSNP IFQKA + Y + L
Sbjct: 11 GQQIWLDNLSRSLVQSGELAQMLKQGVCGVTSNPAIFQKAFAGDALYADEIAALKQQNLS 70
Query: 461 AESAYWELVIKDIQDACKLFEPIYDETDG 547
+ Y + + D++ AC + ++ T G
Sbjct: 71 PKQRYETMAVADVRAACDVCLAEHESTGG 99
>NMA2136 NMA2136 COG0176 [G] Transaldolase
Length = 351
Score = 72.4 bits (176), Expect(2) = 1e-21
Identities = 41/100 (41%), Positives = 65/100 (65%), Gaps = 3/100 (3%)
Frame = +3
Query: 570 EVSPKLANDTQGTVEAAKWLHKVVNRPNVYIKIPATAECVPSIKEVIANGISVNVTLIFS 749
EVSP+L+ D QGTVE A+ L+ + N IK+PAT + +++ ++++GISVN+TL+FS
Sbjct: 107 EVSPELSKDAQGTVEEARRLYAAIGCKNAMIKVPATDAGIDALETLVSDGISVNLTLLFS 166
Query: 750 VARYEAVIDAYLDGLE---ASGLSDLSRVTSVGSFFVSRL 860
A+ AY G+ A+G S ++ + V SFF+SR+
Sbjct: 167 RAQTLKAYAAYARGIAKRLAAGQS-VAHIHVVASFFISRV 205
Score = 50.4 bits (119), Expect(2) = 1e-21
Identities = 29/89 (32%), Positives = 42/89 (46%), Gaps = 3/89 (3%)
Frame = +2
Query: 290 GQSPWYDNLCRPVT---DLLPYIANGVRGVTSNPTIFQKAISSSNAYDGQFKELISAGKD 460
GQ W DNL R + +L + GV GVTSNP IFQKA + Y + L
Sbjct: 11 GQQIWLDNLSRSLVQSGELAQMLKQGVCGVTSNPAIFQKAFAGDALYADEVAALKQQDLT 70
Query: 461 AESAYWELVIKDIQDACKLFEPIYDETDG 547
+ Y + + D++ AC + ++ T G
Sbjct: 71 PKQRYETMAVADVRAACGVCLAEHESTGG 99
>CJ0281C Cj0281c COG0176 [G] Transaldolase
Length = 325
Score = 55.8 bits (133), Expect(2) = 1e-15
Identities = 29/75 (38%), Positives = 46/75 (60%)
Frame = +3
Query: 570 EVSPKLANDTQGTVEAAKWLHKVVNRPNVYIKIPATAECVPSIKEVIANGISVNVTLIFS 749
E+ P+L ++T ++ AK L+ + + N+ IKIPAT + E++ NGISVN TLIFS
Sbjct: 94 EIDPRLHDNTTLSLGEAKRLYSAIGKENIMIKIPATKASYEVMYELMKNGISVNATLIFS 153
Query: 750 VARYEAVIDAYLDGL 794
+ + + +A GL
Sbjct: 154 LEQSQKCFEALNAGL 168
Score = 46.2 bits (108), Expect(2) = 1e-15
Identities = 27/73 (36%), Positives = 39/73 (52%), Gaps = 1/73 (1%)
Frame = +2
Query: 332 DLLPYIANGVRGVTSNPTIFQKAISSSNAYDGQFKELISAGKDAESAYWELVIKDIQDAC 511
+ L +++G+ G TSNP IF+ AI +S Y + +L K + Y EL I DIQ A
Sbjct: 19 EFLNLLSHGINGATSNPAIFKNAILNSPIYKDKILKLKE--KKTKDIYEELAISDIQKAA 76
Query: 512 KLFEPI-YDETDG 547
P+ Y + DG
Sbjct: 77 DKLAPLFYQKNDG 89
>JHP1388 jhp1388 COG0176 [G] Transaldolase
Length = 316
Score = 52.8 bits (125), Expect(2) = 6e-14
Identities = 35/96 (36%), Positives = 50/96 (51%)
Frame = +3
Query: 570 EVSPKLANDTQGTVEAAKWLHKVVNRPNVYIKIPATAECVPSIKEVIANGISVNVTLIFS 749
E+ P L +D +++ AK L K +NRPNV IK+PA+ I + I +NVTL+FS
Sbjct: 96 EIDPFLEDDAIKSIDEAKRLFKTLNRPNVMIKVPASESAFEVISALAQASIPINVTLVFS 155
Query: 750 VARYEAVIDAYLDGLEASGLSDLSRVTSVGSFFVSR 857
+ G A L+ +R +V S FVSR
Sbjct: 156 ---------PKIAGEIAQILAKEARKRAVISVFVSR 182
Score = 43.9 bits (102), Expect(2) = 6e-14
Identities = 30/84 (35%), Positives = 43/84 (50%), Gaps = 3/84 (3%)
Frame = +2
Query: 296 SPWYDNLCRPV--TDLLPYIANG-VRGVTSNPTIFQKAISSSNAYDGQFKELISAGKDAE 466
S W D + R D L I G + G TSNP++F +AI+ S Y + +L GK A+
Sbjct: 5 SLWCDFIERDFLENDFLKLINKGAICGATSNPSLFCEAITKSAFYQDEIAKL--KGKKAK 62
Query: 467 SAYWELVIKDIQDACKLFEPIYDE 538
Y L +KDI A P+Y++
Sbjct: 63 EIYETLALKDILQASSALMPLYEK 86
>HP1495 HP1495 COG0176 [G] Transaldolase
Length = 316
Score = 52.4 bits (124), Expect(2) = 1e-13
Identities = 25/60 (41%), Positives = 37/60 (61%)
Frame = +3
Query: 570 EVSPKLANDTQGTVEAAKWLHKVVNRPNVYIKIPATAECVPSIKEVIANGISVNVTLIFS 749
E+ P L +D +++ AK L K +NRPNV IK+PA+ + + + I VNVTL+FS
Sbjct: 96 EIDPFLEDDAAKSIDEAKRLFKTLNRPNVMIKVPASESGIEVVSALTQASIPVNVTLVFS 155
Score = 43.5 bits (101), Expect(2) = 1e-13
Identities = 30/84 (35%), Positives = 43/84 (50%), Gaps = 3/84 (3%)
Frame = +2
Query: 296 SPWYDNLCRPV--TDLLPYIANG-VRGVTSNPTIFQKAISSSNAYDGQFKELISAGKDAE 466
S W D + R D L I G + G TSNP++F +AI+ S Y + +L GK A+
Sbjct: 5 SLWCDFIERDFLENDFLKLINKGAICGATSNPSLFCEAITKSAFYKDEIAKL--KGKKAK 62
Query: 467 SAYWELVIKDIQDACKLFEPIYDE 538
Y L +KDI A P+Y++
Sbjct: 63 EIYETLALKDILQASSALMPLYEK 86
>PM1602 PM1602 COG0176 [G] Transaldolase
Length = 317
Score = 44.3 bits (103), Expect = 3e-04
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Frame = +3
Query: 570 EVSPKLANDTQGTVEAAKWLHKVVNRPNV-----YIKIPATAECVPSIKEVIANGISVNV 734
EV +L+ DTQ T+E AK L + N + IKI +T + + + +E+ GI+ N+
Sbjct: 96 EVDARLSYDTQATIEKAKKLIALYNEAGISNDRILIKIASTWQGIRAAEELEKQGINCNL 155
Query: 735 TLIFSVARYEAVIDA 779
TL+FS A+ A +A
Sbjct: 156 TLLFSEAQARACAEA 170
>MJ0960 MJ0960 COG0176 [G] Transaldolase
Length = 217
Score = 43.1 bits (100), Expect = 6e-04
Identities = 22/55 (40%), Positives = 36/55 (65%)
Frame = +3
Query: 585 LANDTQGTVEAAKWLHKVVNRPNVYIKIPATAECVPSIKEVIANGISVNVTLIFS 749
++ D +G V+ A+ L K+ + N+ IKIP T + + ++K + A GI NVTL+FS
Sbjct: 59 ISTDAEGMVKEARELAKLAD--NIVIKIPMTKDGMKAVKILSAEGIKTNVTLVFS 111
>PM1639 PM1639 COG0176 [G] Transaldolase
Length = 316
Score = 42.7 bits (99), Expect = 8e-04
Identities = 26/75 (34%), Positives = 43/75 (56%), Gaps = 5/75 (6%)
Frame = +3
Query: 570 EVSPKLANDTQGTVEAAKWLHKVVNRPNV-----YIKIPATAECVPSIKEVIANGISVNV 734
EV +L+ DTQ T+E A+ L K+ N + IKI +T + + + + + GI+ N+
Sbjct: 95 EVDARLSYDTQATIEKARKLIKLYNEAGIENHRILIKIASTWQGIRAAEVLEKEGINCNL 154
Query: 735 TLIFSVARYEAVIDA 779
TL+FS A+ A +A
Sbjct: 155 TLLFSEAQARACAEA 169
>YLR354C YLR354c COG0176 [G] Transaldolase
Length = 335
Score = 42.0 bits (97), Expect = 0.001
Identities = 28/76 (36%), Positives = 45/76 (58%), Gaps = 6/76 (7%)
Frame = +3
Query: 570 EVSPKLANDTQGTVEAAKWLHKV-----VNRPNVYIKIPATAECVPSIKEV-IANGISVN 731
EV +L+ DTQ T+E A+ + K+ V++ V IKI +T E + + KE+ +GI N
Sbjct: 108 EVDARLSFDTQATIEKARHIIKLFEQEGVSKERVLIKIASTWEGIQAAKELEEKDGIHCN 167
Query: 732 VTLIFSVARYEAVIDA 779
+TL+FS + A +A
Sbjct: 168 LTLLFSFVQAVACAEA 183
>BH3785 BH3785 COG0176 [G] Transaldolase
Length = 212
Score = 41.2 bits (95), Expect = 0.002
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Frame = +3
Query: 585 LANDTQGTVEAAKWLHKVVNRPNVYIKIPATAECVPSIKEVIANGISVNVTLIFSV---- 752
+A D +G ++ K L + PN+ +K+P T E + ++ GI+ NVTL+FS
Sbjct: 59 VALDAEGMIKEGKELAAIA--PNITVKVPMTTEGLKAVHAFHQEGITTNVTLVFSAVQAL 116
Query: 753 ------ARYEAVIDAYLDGLEASGLSDLSRVTSV 836
A Y + LD + GL +S++ +
Sbjct: 117 LAARAGATYVSPFLGRLDDIGHDGLDLISQIAEI 150
>SPY1947 SPy1947 COG0176 [G] Transaldolase
Length = 243
Score = 40.8 bits (94), Expect = 0.003
Identities = 20/46 (43%), Positives = 30/46 (64%), Gaps = 4/46 (8%)
Frame = +3
Query: 651 NVYIKIPATAEC----VPSIKEVIANGISVNVTLIFSVARYEAVID 776
NVY+KIP T P I+++ A GI +NVT IF++ + +AV+D
Sbjct: 88 NVYVKIPVTTSTGESTCPLIQKLSAKGIKLNVTAIFTIEQTQAVVD 133
>HI1125 HI1125 COG0176 [G] Transaldolase
Length = 317
Score = 40.4 bits (93), Expect = 0.004
Identities = 26/75 (34%), Positives = 42/75 (55%), Gaps = 5/75 (6%)
Frame = +3
Query: 570 EVSPKLANDTQGTVEAAKWLHKVVN-----RPNVYIKIPATAECVPSIKEVIANGISVNV 734
EV +L+ DTQ TVE A+ L + N + IKI +T + + + + + GI+ N+
Sbjct: 96 EVDARLSYDTQATVEKARKLIALYNAAGISNDRILIKIASTWQGIRAAEILEKEGINCNL 155
Query: 735 TLIFSVARYEAVIDA 779
TL+FS A+ A +A
Sbjct: 156 TLLFSEAQARACAEA 170
>TALC talC COG0176 [G] Transaldolase
Length = 220
Score = 40.4 bits (93), Expect = 0.004
Identities = 26/79 (32%), Positives = 39/79 (48%), Gaps = 15/79 (18%)
Frame = +3
Query: 567 WEVSPKL---------------ANDTQGTVEAAKWLHKVVNRPNVYIKIPATAECVPSIK 701
WEV P+L + D QG VE AK L + P + +KIP T+E + +IK
Sbjct: 40 WEVLPRLQKAIGDEGILFAQTMSRDAQGMVEEAKRLRDAI--PGIVVKIPVTSEGLAAIK 97
Query: 702 EVIANGISVNVTLIFSVAR 758
+ GI+ T ++S A+
Sbjct: 98 ILKKEGITTLGTAVYSAAQ 116
>ZTALC ZtalC COG0176 [G] Transaldolase
Length = 220
Score = 40.4 bits (93), Expect = 0.004
Identities = 26/79 (32%), Positives = 39/79 (48%), Gaps = 15/79 (18%)
Frame = +3
Query: 567 WEVSPKL---------------ANDTQGTVEAAKWLHKVVNRPNVYIKIPATAECVPSIK 701
WEV P+L + D QG VE AK L + P + +KIP T+E + +IK
Sbjct: 40 WEVLPRLQKAIGDEGILFAQTMSRDAQGMVEEAKRLRDAI--PGIVVKIPVTSEGLAAIK 97
Query: 702 EVIANGISVNVTLIFSVAR 758
+ GI+ T ++S A+
Sbjct: 98 ILKKEGITTLGTAVYSAAQ 116
>TALB talB COG0176 [G] Transaldolase
Length = 317
Score = 40.0 bits (92), Expect = 0.005
Identities = 23/75 (30%), Positives = 43/75 (56%), Gaps = 5/75 (6%)
Frame = +3
Query: 570 EVSPKLANDTQGTVEAAKWLHKVVN-----RPNVYIKIPATAECVPSIKEVIANGISVNV 734
EV +L+ DT+ ++ AK L K+ N + IK+ +T + + + +++ GI+ N+
Sbjct: 96 EVDARLSYDTEASIAKAKRLIKLYNDAGISNDRILIKLASTWQGIRAAEQLEKEGINCNL 155
Query: 735 TLIFSVARYEAVIDA 779
TL+FS A+ A +A
Sbjct: 156 TLLFSFAQARACAEA 170
>ZTALB ZtalB COG0176 [G] Transaldolase
Length = 317
Score = 40.0 bits (92), Expect = 0.005
Identities = 23/75 (30%), Positives = 43/75 (56%), Gaps = 5/75 (6%)
Frame = +3
Query: 570 EVSPKLANDTQGTVEAAKWLHKVVN-----RPNVYIKIPATAECVPSIKEVIANGISVNV 734
EV +L+ DT+ ++ AK L K+ N + IK+ +T + + + +++ GI+ N+
Sbjct: 96 EVDARLSYDTEASIAKAKRLIKLYNDAGISNDRILIKLASTWQGIRAAEQLEKEGINCNL 155
Query: 735 TLIFSVARYEAVIDA 779
TL+FS A+ A +A
Sbjct: 156 TLLFSFAQARACAEA 170
>BS_YWJH BS_ywjH COG0176 [G] Transaldolase
Length = 186
Score = 39.7 bits (91), Expect = 0.007
Identities = 26/86 (30%), Positives = 43/86 (49%), Gaps = 10/86 (11%)
Frame = +3
Query: 609 VEAAKWLHKVVNRPNVYIKIPATAECVPSIKEVIANGISVNVTLIFSV----------AR 758
+E K L K+ PN+ +KIP T++ + +++ + GI NVTLIF+ A
Sbjct: 68 IEEGKELAKIA--PNITVKIPMTSDGLKAVRALTGLGIKTNVTLIFNANQALLAARAGAT 125
Query: 759 YEAVIDAYLDGLEASGLSDLSRVTSV 836
Y + LD + +GL +S V +
Sbjct: 126 YVSPFLGRLDDIGHNGLDLISEVKQI 151
>BU093 BU093 COG0176 [G] Transaldolase
Length = 316
Score = 39.7 bits (91), Expect = 0.007
Identities = 23/75 (30%), Positives = 43/75 (56%), Gaps = 5/75 (6%)
Frame = +3
Query: 570 EVSPKLANDTQGTVEAAKWL-----HKVVNRPNVYIKIPATAECVPSIKEVIANGISVNV 734
EV +L+ T+ ++ AK + + ++R V IK+ AT EC+ + +E+ + I N+
Sbjct: 95 EVDARLSFSTEASILKAKKIIDLYEEQGISRNRVLIKLAATWECIKAAEELKKDSILCNL 154
Query: 735 TLIFSVARYEAVIDA 779
TL+FS A+ A ++
Sbjct: 155 TLLFSFAQARACAES 169
>TM0295 TM0295 COG0176 [G] Transaldolase
Length = 218
Score = 39.3 bits (90), Expect = 0.009
Identities = 27/91 (29%), Positives = 43/91 (46%), Gaps = 10/91 (10%)
Frame = +3
Query: 594 DTQGTVEAAKWLHKVVNRPNVYIKIPATAECVPSIKEVIANGISVNVTLIFSVAR----- 758
D +G V A+ L ++ V IKIP T + + ++K + A GI NVTL+FS A+
Sbjct: 62 DYEGMVREARELAQISEY--VVIKIPMTPDGIKAVKTLSAEGIKTNVTLVFSPAQAILAA 119
Query: 759 -----YEAVIDAYLDGLEASGLSDLSRVTSV 836
Y + +D L G+ L + +
Sbjct: 120 KAGATYVSPFVGRMDDLSNDGMRMLGEIVEI 150
>TALA talA COG0176 [G] Transaldolase
Length = 316
Score = 38.9 bits (89), Expect = 0.012
Identities = 23/75 (30%), Positives = 43/75 (56%), Gaps = 5/75 (6%)
Frame = +3
Query: 570 EVSPKLANDTQGTVEAAKWL-----HKVVNRPNVYIKIPATAECVPSIKEVIANGISVNV 734
EV +L+ D + ++E A+ L + V + + IK+ +T E + + +E+ GI+ N+
Sbjct: 95 EVDARLSFDKEKSIEKARHLVDLYQQQGVEKSRILIKLASTWEGIRAAEELEKEGINCNL 154
Query: 735 TLIFSVARYEAVIDA 779
TL+FS A+ A +A
Sbjct: 155 TLLFSFAQARACAEA 169
>ZTALA ZtalA COG0176 [G] Transaldolase
Length = 316
Score = 38.9 bits (89), Expect = 0.012
Identities = 23/75 (30%), Positives = 43/75 (56%), Gaps = 5/75 (6%)
Frame = +3
Query: 570 EVSPKLANDTQGTVEAAKWL-----HKVVNRPNVYIKIPATAECVPSIKEVIANGISVNV 734
EV +L+ D + ++E A+ L + V + + IK+ +T E + + +E+ GI+ N+
Sbjct: 95 EVDARLSFDKEKSIEKARHLVDLYQQQGVEKSRILIKLASTWEGIRAAEELEKEGINCNL 154
Query: 735 TLIFSVARYEAVIDA 779
TL+FS A+ A +A
Sbjct: 155 TLLFSFAQARACAEA 169
>VCA0623 VCA0623 COG0176 [G] Transaldolase
Length = 316
Score = 38.1 bits (87), Expect = 0.020
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Frame = +3
Query: 570 EVSPKLANDTQGTVEAAKWLHKVVN-----RPNVYIKIPATAECVPSIKEVIANGISVNV 734
EV +L+ DT+ +V A+ L K+ N + IK+ +T E + + + + GI+ N+
Sbjct: 96 EVDARLSYDTERSVAKARQLVKMYNDAGISNDRILIKLASTWEGIRAAEILEKEGINCNL 155
Query: 735 TLIFSVARYEAVIDA 779
TL+FS A+ A +A
Sbjct: 156 TLLFSFAQARACAEA 170
>PA2796 PA2796 COG0176 [G] Transaldolase
Length = 307
Score = 37.7 bits (86), Expect = 0.026
Identities = 25/75 (33%), Positives = 42/75 (55%), Gaps = 5/75 (6%)
Frame = +3
Query: 570 EVSPKLANDTQGTVEAAKWLHKV-----VNRPNVYIKIPATAECVPSIKEVIANGISVNV 734
EV +L+ D++ T+ A L ++ ++R V IKI +T E + + + + GI N+
Sbjct: 89 EVDARLSFDSEATLARAHRLIELYDEQGIDRERVLIKIASTWEGIRAAEILEREGIQTNL 148
Query: 735 TLIFSVARYEAVIDA 779
TL+FS A+ A DA
Sbjct: 149 TLLFSFAQAVACADA 163
>CPN0083 CPn0083 COG0176 [G] Transaldolase
Length = 327
Score = 36.2 bits (82), Expect = 0.077
Identities = 21/75 (28%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Frame = +3
Query: 570 EVSPKLANDTQGTVEAAKWLHKVV-----NRPNVYIKIPATAECVPSIKEVIANGISVNV 734
E+ +L+ + + V+ A +L ++ ++ + +KIP T E + +++ + A GI+ NV
Sbjct: 96 EIDARLSFNVEAMVQRAVFLSQLFEAMGGDKKRLLVKIPGTWEGIRAVEFLEAKGIACNV 155
Query: 735 TLIFSVARYEAVIDA 779
TLIF++ + A A
Sbjct: 156 TLIFNLVQAIAAAKA 170
>AQ_119 aq_119 COG0176 [G] Transaldolase
Length = 217
Score = 35.4 bits (80), Expect = 0.13
Identities = 24/93 (25%), Positives = 43/93 (45%), Gaps = 10/93 (10%)
Frame = +3
Query: 594 DTQGTVEAAKWLHKVVNRPNVYIKIPATAECVPSIKEVIANGISVNVTLIFSV------- 752
D +G + + L ++ NV +KIP T E + ++ + + GI NVTL+FS
Sbjct: 62 DAEGMIREGRMLAELGE--NVVVKIPMTPEGLKAVIALESEGIPTNVTLVFSPTQALLAA 119
Query: 753 ---ARYEAVIDAYLDGLEASGLSDLSRVTSVGS 842
A Y + LD + G+ + + ++ S
Sbjct: 120 KAGASYVSPFVGRLDDISGEGMKLIEEIKTIFS 152
>SLR1793 slr1793 COG0176 [G] Transaldolase
Length = 391
Score = 35.4 bits (80), Expect = 0.13
Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Frame = +3
Query: 570 EVSPKLANDTQGTVEAAKWL-----HKVVNRPNVYIKIPATAECVPSIKEVIANGISVNV 734
EV +L+ DT+ T+ A++L +++ + IKI +T E + + + + GI N+
Sbjct: 100 EVDARLSYDTEATIAKARYLIGEYAKAGIDKKRILIKIASTWEGIKAAEVLEQEGIHCNL 159
Query: 735 TLIFSVARYEAVIDA 779
TL+F + + A +A
Sbjct: 160 TLLFGLHQAIACAEA 174
>YGR043C YGR043c COG0176 [G] Transaldolase
Length = 333
Score = 35.4 bits (80), Expect = 0.13
Identities = 25/76 (32%), Positives = 43/76 (55%), Gaps = 6/76 (7%)
Frame = +3
Query: 570 EVSPKLANDTQGTVEAAKWLHKV-----VNRPNVYIKIPATAECVPSIKEV-IANGISVN 731
EV +L+ D + TV+ A + K+ V + V IKI +T E + + +E+ + +GI N
Sbjct: 108 EVDARLSFDKKATVKKALHIIKLYKDAGVPKERVLIKIASTWEGIQAARELEVKHGIHCN 167
Query: 732 VTLIFSVARYEAVIDA 779
+TL+FS + A +A
Sbjct: 168 MTLLFSFTQAVACAEA 183
>CT313 CT313 COG0176 [G] Transaldolase
Length = 327
Score = 35.0 bits (79), Expect = 0.17
Identities = 21/75 (28%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Frame = +3
Query: 570 EVSPKLANDTQGTVEAAKWLHKVV-----NRPNVYIKIPATAECVPSIKEVIANGISVNV 734
E+ +L+ +T+ V+ A +L ++ ++ + +KIP T E + + + + + GI+ NV
Sbjct: 96 EIDARLSFNTEAMVQRAIFLSQLFEKMGGDKKRLLVKIPGTWEGICAAEVLESQGIACNV 155
Query: 735 TLIFSVARYEAVIDA 779
TLIF++ + A A
Sbjct: 156 TLIFNLVQAIAAAKA 170
>TVN0666 TVN0666 COG0176 [G] Transaldolase
Length = 223
Score = 34.7 bits (78), Expect = 0.22
Identities = 23/99 (23%), Positives = 47/99 (47%), Gaps = 10/99 (10%)
Frame = +3
Query: 585 LANDTQGTVEAAKWLHKVVNRPNVYIKIPATAECVPSIKEVIANGISVNVTLIF------ 746
++ + G VE A+ +H + + N +KIP T E + +I+++ I N TL+F
Sbjct: 62 VSTKSDGMVEEARKIHALGD--NAVVKIPMTDEGLKAIRKLSQENIETNCTLVFNPIQAL 119
Query: 747 ----SVARYEAVIDAYLDGLEASGLSDLSRVTSVGSFFV 851
S A Y + LD + G+ + + ++ + ++
Sbjct: 120 LAAKSGATYVSPFVGRLDDIGQDGMQIIDEIKTIFNNYI 158
>SPY1678 SPy1678 COG0176 [G] Transaldolase
Length = 214
Score = 34.3 bits (77), Expect = 0.29
Identities = 19/47 (40%), Positives = 26/47 (54%)
Frame = +3
Query: 618 AKWLHKVVNRPNVYIKIPATAECVPSIKEVIANGISVNVTLIFSVAR 758
AKW NV +KIP T E + + + GI NVTLIF+V++
Sbjct: 74 AKW------HDNVVVKIPMTTEGLKATNILSKEGIKTNVTLIFTVSQ 114
>MIPB mipB COG0176 [G] Transaldolase
Length = 244
Score = 34.3 bits (77), Expect = 0.29
Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Frame = +3
Query: 585 LANDTQGTVEAAKWLHKVVNRPNVYIKIPATAECVPSIKEVIANGISVNVTLIFSVAR-- 758
+A +G V A L ++ ++ +K+P TAE + +IK + A GI T ++ A+
Sbjct: 85 MATTAEGMVNDALKLRSII--ADIVVKVPVTAEGLAAIKMLKAEGIPTLGTAVYGAAQGL 142
Query: 759 YEAVIDA-----YLDGLEASGLSDLSRVTSV 836
A+ A Y++ ++A G S + VT +
Sbjct: 143 LSALAGAEYVAPYVNRIDAQGGSGIQTVTDL 173
>CDA4536 CDa4536 COG0176 [G] Transaldolase
Length = 323
Score = 34.3 bits (77), Expect = 0.29
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Frame = +3
Query: 570 EVSPKLANDTQGTVEAAKWL-----HKVVNRPNVYIKIPATAECVPSIKEVIA-NGISVN 731
EV +L+ D + TV+ A L + + + + IKI +T E + + +E+ + +GI N
Sbjct: 98 EVDARLSFDKEATVKKALELIDLYKQQGIEKDRILIKIASTWEGIQAARELESKHGIHCN 157
Query: 732 VTLIFSVARYEAVIDA 779
+TL+FS A+ A +A
Sbjct: 158 LTLLFSFAQAVACAEA 173
>SPY2048 SPy2048 COG0176 [G] Transaldolase
Length = 222
Score = 34.3 bits (77), Expect = 0.29
Identities = 20/70 (28%), Positives = 37/70 (52%)
Frame = +3
Query: 585 LANDTQGTVEAAKWLHKVVNRPNVYIKIPATAECVPSIKEVIANGISVNVTLIFSVARYE 764
+A D +G ++ A + + +VY+K+P T E + +IK + A G + T I++ +
Sbjct: 62 IAQDYEGILKDAAEIRRQCG-DSVYVKVPVTTEGLAAIKTLKAEGYHITATAIYTTFQGL 120
Query: 765 AVIDAYLDGL 794
I+A D L
Sbjct: 121 LAIEAGADYL 130
>TA0616 Ta0616 COG0176 [G] Transaldolase
Length = 223
Score = 32.7 bits (73), Expect = 0.85
Identities = 17/50 (34%), Positives = 31/50 (62%)
Frame = +3
Query: 600 QGTVEAAKWLHKVVNRPNVYIKIPATAECVPSIKEVIANGISVNVTLIFS 749
+G VE A+ +H + + N +KIP T + + +IK + + I+ N TL+F+
Sbjct: 67 EGMVEEARKIHGLGD--NAVVKIPMTEDGLRAIKTLSSEHINTNCTLVFN 114
>DR1337 DR1337 COG0176 [G] Transaldolase
Length = 286
Score = 31.2 bits (69), Expect = 2.5
Identities = 20/59 (33%), Positives = 30/59 (49%), Gaps = 4/59 (6%)
Frame = +3
Query: 588 ANDTQGTVEAAK----WLHKVVNRPNVYIKIPATAECVPSIKEVIANGISVNVTLIFSV 752
A D +G ++ K W +VV +K+P T + + K + + GI NVTL FSV
Sbjct: 113 ALDAEGMIKEGKDVAAWHKQVV------VKLPLTPAGLQACKALTSEGIKTNVTLCFSV 165
>HP0054_2 HP0054_2 COG0827 [L] Adenine-specific DNA methylase
Length = 449
Score = 29.3 bits (64), Expect = 9.4
Identities = 15/49 (30%), Positives = 27/49 (54%), Gaps = 1/49 (2%)
Frame = -1
Query: 528 MGSNSLHASWISFMTS-SQ*ALSASFPADISSLN*PSYAFDEEMAFWKI 385
+G + I+ +T S+ L+ S P ++S PSY FD+++ +W I
Sbjct: 241 LGFKGVLVETIAIVTQKSKEVLARSLPLNLSIKQKPSYIFDKQLPYWVI 289
>CT241 CT241 COG0729 [M] Predicted outer membrane protein
Length = 792
Score = 29.3 bits (64), Expect = 9.4
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 9/72 (12%)
Frame = +3
Query: 264 RSMTSTSNRGSP-----RGTTTSAGLS----PICCPTSPTVSVESPATQRFSRKPSLHQT 416
R TS+SNR P +G ++AGL+ I P PT+ + S S +Q
Sbjct: 566 RKKTSSSNRPGPDLDSNKGFVSAAGLNVLYDSIDNPRKPTMGIRSSLNFELSGLGGTYQF 625
Query: 417 RMTVSSRSLYQL 452
+S S+Y+L
Sbjct: 626 TKLTASGSIYRL 637
Database: COGs
Posted date: Jan 30, 2002 4:01 PM
Number of letters in database: 26,228,252
Number of sequences in database: 78,847
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33024640
Number of Sequences: 78847
Number of extensions: 642234
Number of successful extensions: 2033
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 1941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2003
length of query: 294
length of database: 26,228,252
effective HSP length: 49
effective length of query: 244
effective length of database: 22,364,749
effective search space: 5456998756
effective search space used: 5456998756
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)