TBLASTX 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCPvsNca/blast/0941_E09_I17ZS5.seq
         (884 letters)

Database: /phillip/Ncr/Ncr_G
           995 sequences; 37,969,317 total letters

Searching....................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

NCR_G_C2.465 Ncr_G_C2.465                                              44  1e-08
NCR_G_C2.445 Ncr_G_C2.445                                              33  0.50
NCR_G_C2.404 Ncr_G_C2.404                                              30  0.61
NCR_G_C2.043 Ncr_G_C2.043                                              26  0.63
NCR_G_C2.307 Ncr_G_C2.307                                              27  0.69
NCR_G_C2.205 Ncr_G_C2.205                                              32  0.69
NCR_G_C2.624 Ncr_G_C2.624                                              32  0.95
NCR_G_C2.073 Ncr_G_C2.073                                              28  2.1
NCR_G_C2.236 Ncr_G_C2.236                                              30  2.5
NCR_G_C2.047 Ncr_G_C2.047                                              30  2.5
NCR_G_C2.664 Ncr_G_C2.664                                              30  3.4
NCR_G_C2.122 Ncr_G_C2.122                                              30  3.4
NCR_G_C2.350 Ncr_G_C2.350                                              30  3.4
NCR_G_C2.116 Ncr_G_C2.116                                              29  4.7
NCR_G_C2.780 Ncr_G_C2.780                                              29  4.7
NCR_G_C2.083 Ncr_G_C2.083                                              29  4.7
NCR_G_C2.127 Ncr_G_C2.127                                              29  4.7
NCR_G_C2.488 Ncr_G_C2.488                                              29  4.7
NCR_G_C2.674 Ncr_G_C2.674                                              29  4.7
NCR_G_C2.117 Ncr_G_C2.117                                              29  6.4
NCR_G_C2.022_1 Ncr_G_C2.022_1.seq Continuation (1 of 6) of Ncr_G...    29  6.4
NCR_G_C2.266 Ncr_G_C2.266                                              29  6.4
NCR_G_C2.569 Ncr_G_C2.569                                              26  7.8
NCR_G_C2.568 Ncr_G_C2.568                                              29  8.8
NCR_G_C2.684 Ncr_G_C2.684                                              29  8.8
NCR_G_C2.494 Ncr_G_C2.494                                              29  8.8
NCR_G_C2.561 Ncr_G_C2.561                                              29  8.8

>NCR_G_C2.465 Ncr_G_C2.465
          Length = 18593

 Score = 43.7 bits (89), Expect(2) = 1e-08
 Identities = 19/40 (47%), Positives = 27/40 (67%)
 Frame = +3 / -3

                                                     
Query: 153   RLLYRRALNDTLNWAVHRHLFYHDASELRDKFEANRNVEN 272
             R LYRR+L  +L+WAV+R L+   A  +R  FE NR+V +
Sbjct: 12405 RSLYRRSLKLSLDWAVNRQLWRGQALYIRSLFEKNRDVHD 12286


 Score = 34.1 bits (68), Expect(2) = 1e-08
 Identities = 10/26 (38%), Positives = 19/26 (72%)
 Frame = +3 / -3

                                       
Query: 291   LIXDAEAQQKNFQHPDPYIVPWAPGG 368
             L+ + E   ++++HPDP++ P +PGG
Sbjct: 12210 LLRETEKLLEHWKHPDPFVPPLSPGG 12133


>NCR_G_C2.445 Ncr_G_C2.445
          Length = 167464

 Score = 32.7 bits (65), Expect = 0.50
 Identities = 15/43 (34%), Positives = 21/43 (47%)
 Frame = +1 / +2

                                                        
Query: 412   LSTTMAKKTNEQXSCFCEHTLAPAECQGLPFAFPDDCMQLSCL 540
             L  T  + ++ Q  C C +T APA  Q    ++P  C   SCL
Sbjct: 56891 LVQTSRQSSSPQFECLCVYTTAPAPKQTSTGSWPV*CYTCSCL 57019


>NCR_G_C2.404 Ncr_G_C2.404
          Length = 264766

 Score = 30.4 bits (60), Expect(2) = 0.61
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = +2 / +2

                                                   
Query: 509    FPMIACNLAACFVKTK*NYSPPSLCFFYHGMFFATYF 619
              FP +   L ACF       SP  L FF+   FF  +F
Sbjct: 146570 FPCLLACLLACFKNPSPPSSPSILIFFFFFFFFFFFF 146680


 Score = 19.8 bits (37), Expect(2) = 0.61
 Identities = 5/7 (71%), Positives = 6/7 (85%)
 Frame = +2 / +1

                     
Query: 470    PWHRPSA 490
              PWH PS+
Sbjct: 146428 PWHAPSS 146448


>NCR_G_C2.043 Ncr_G_C2.043
          Length = 199771

 Score = 25.8 bits (50), Expect(2) = 0.63
 Identities = 11/34 (32%), Positives = 16/34 (46%)
 Frame = -2 / +3

                                                
Query: 565    VILFCFNKTSS*VACNHREKQKEVLGTRPVPGYA 464
              ++  CF   S    C HR +Q     T+ VP Y+
Sbjct: 143289 IVRLCFRHISQPTYCVHRTQQTMPTYTQYVPQYS 143390


 Score = 24.4 bits (47), Expect(2) = 0.63
 Identities = 8/13 (61%), Positives = 9/13 (68%)
 Frame = -1 / +3

                           
Query: 407    NPLRWRRVPCEFS 369
              NP+RW R P  FS
Sbjct: 143499 NPVRWTRGPLTFS 143537


>NCR_G_C2.307 Ncr_G_C2.307
          Length = 85225

 Score = 27.2 bits (53), Expect(2) = 0.69
 Identities = 10/23 (43%), Positives = 12/23 (51%)
 Frame = +2 / -1

                                    
Query: 563   YSPPSLCFFYHGMFFATYFFPPH 631
             YSPP +CF       +   FPPH
Sbjct: 32044 YSPPHVCFCPPLPLLSLLVFPPH 31976


 Score = 23.1 bits (44), Expect(2) = 0.69
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2 / -1

                                 
Query: 482   PSAKDFLLLFPMIACNLAAC 541
             P +  + LLFP+++  L +C
Sbjct: 32116 PFSSSYSLLFPLLSPPLPSC 32057


>NCR_G_C2.205 Ncr_G_C2.205
          Length = 197179

 Score = 32.2 bits (64), Expect = 0.69
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -3 / +1

                                      
Query: 537    AAKLHAIIGKSKRKSLALGRCQGM 466
              ++KLH   GK+KRK ++   CQG+
Sbjct: 177370 SSKLHRTTGKNKRKEISRTECQGL 177441


>NCR_G_C2.624 Ncr_G_C2.624
          Length = 145122

 Score = 31.8 bits (63), Expect = 0.95
 Identities = 11/23 (47%), Positives = 13/23 (55%)
 Frame = -1 / -1

                                    
Query: 494   PWHSAGARVCSQKHDXCSLVFFA 426
             PW S G  +CS  H   SLV F+
Sbjct: 21477 PWSSVGPAICSAAHPQSSLVLFS 21409


>NCR_G_C2.073 Ncr_G_C2.073
          Length = 94453

 Score = 28.1 bits (55), Expect(2) = 2.1
 Identities = 8/12 (66%), Positives = 9/12 (74%)
 Frame = -2 / -2

                         
Query: 346   M*GSGCWKFFCC 311
             M G+ CWK FCC
Sbjct: 38874 MYGAACWKSFCC 38839


 Score = 20.3 bits (38), Expect(2) = 2.1
 Identities = 5/14 (35%), Positives = 6/14 (42%)
 Frame = -1 / -3

                           
Query: 395   WRRVPCEFSATRSP 354
             W   PC   +  SP
Sbjct: 39005 WTPTPCILVSIWSP 38964


>NCR_G_C2.236 Ncr_G_C2.236
          Length = 344103

 Score = 30.4 bits (60), Expect = 2.5
 Identities = 15/38 (39%), Positives = 19/38 (49%)
 Frame = +3 / +3

                                                    
Query: 18     RCGTXXPTHQMERETPRRTGAGAAAKSMSTTAGYLARR 131
              RC        M R +PR TG+   A + STT+  L RR
Sbjct: 285069 RCSRTCARADMSRTSPRSTGSRTTACT*STTSRRLPRR 285182


>NCR_G_C2.047 Ncr_G_C2.047
          Length = 11556

 Score = 30.4 bits (60), Expect = 2.5
 Identities = 13/50 (26%), Positives = 23/50 (46%)
 Frame = +1 / -3

                                                              
Query: 358  LLVALNSQGTLLHLRGLRLSTTMAKKTNEQXSCFCEHTLAPAECQGLPFA 507
            L  A+  +G L+ +  +  S    +  +   SC C   L+  +C G PF+
Sbjct: 9439 LATAVREEGVLVVMETM*ASPVGVRWVSLGLSCGCSFPLSSVDCSGCPFS 9290


>NCR_G_C2.664 Ncr_G_C2.664
          Length = 54200

 Score = 29.9 bits (59), Expect = 3.4
 Identities = 11/41 (26%), Positives = 20/41 (47%)
 Frame = -1 / +3

                                                      
Query: 470   VCSQKHDXCSLVFFAIVVDNLNPLRWRRVPCEFSATRSPWN 348
             VCS+ H   S+  F++   +L+  RW +    F  +   W+
Sbjct: 52872 VCSRSHSSYSVTIFSLPYSSLST*RWYKASSFFLVSVPYWS 52994


>NCR_G_C2.122 Ncr_G_C2.122
          Length = 63268

 Score = 29.9 bits (59), Expect = 3.4
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -2 / -1

                                           
Query: 115   PAVVDIDFAAAPAPVLLGVSLSIWCVGXXV 26
             P  V +  A    P+LLG +L +W VG  V
Sbjct: 17326 PPSVSVVSAKGVLPLLLGAALGVWLVGKAV 17237


>NCR_G_C2.350 Ncr_G_C2.350
          Length = 51497

 Score = 29.9 bits (59), Expect = 3.4
 Identities = 10/15 (66%), Positives = 12/15 (79%)
 Frame = -1 / +3

                            
Query: 818   GEKGSEDGGEVGWRR 774
             GEKG+ +GGE GW R
Sbjct: 23661 GEKGTREGGEGGWDR 23705


>NCR_G_C2.116 Ncr_G_C2.116
          Length = 72284

 Score = 29.5 bits (58), Expect = 4.7
 Identities = 9/17 (52%), Positives = 11/17 (63%)
 Frame = +2 / +1

                             
Query: 572  PSLCFFYHGMFFATYFF 622
            P LC F+ G+FF   FF
Sbjct: 2872 PFLCRFFSGVFFPDLFF 2922


>NCR_G_C2.780 Ncr_G_C2.780
          Length = 40824

 Score = 29.5 bits (58), Expect = 4.7
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2 / +2

                           
Query: 326   PAPGSLHCSMGSWW 367
             P P S HCS+GS W
Sbjct: 11864 PNPRS*HCSVGSAW 11905


>NCR_G_C2.083 Ncr_G_C2.083
          Length = 123429

 Score = 29.5 bits (58), Expect = 4.7
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = +3 / +3

                                                              
Query: 228   SELRDKFEANRNVENLDVIDRLIXDAEAQQKNFQHPDPYIVPWAPGGTK 374
             S+ R  FEA  ++  + V+ R   DAE + K      P + P   G TK
Sbjct: 21549 SDDRSTFEAPFDISKIPVVTREQADAEDRTKKLTATTPSLKPPKVGPTK 21695


>NCR_G_C2.127 Ncr_G_C2.127
          Length = 41672

 Score = 29.5 bits (58), Expect = 4.7
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +2 / +2

                                
Query: 560  NYSPPSLCFFYHGMFFATYF 619
            N++PPSL FF+   FF  +F
Sbjct: 1757 NHNPPSLLFFFFFFFFFFFF 1816


>NCR_G_C2.488 Ncr_G_C2.488
          Length = 91443

 Score = 29.5 bits (58), Expect = 4.7
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -2 / +2

                                  
Query: 115   PAVVDIDFAAAPAPVLLGVSL 53
             P +VD+D  AAP P +L VSL
Sbjct: 52142 PVIVDLDAEAAPKPRILVVSL 52204


>NCR_G_C2.674 Ncr_G_C2.674
          Length = 50803

 Score = 29.5 bits (58), Expect = 4.7
 Identities = 11/38 (28%), Positives = 21/38 (54%)
 Frame = +2 / +2

                                                   
Query: 509   FPMIACNLAACFVKTK*NYSPPSLCFFYHGMFFATYFF 622
             + + + ++   F+ T  +  P S  FF+H  FF+ +FF
Sbjct: 29612 YQLTSTSIPISFIFTSQSPEPLSAPFFFHLFFFSPFFF 29725


>NCR_G_C2.117 Ncr_G_C2.117
          Length = 19609

 Score = 29.0 bits (57), Expect = 6.4
 Identities = 14/39 (35%), Positives = 19/39 (47%)
 Frame = +3 / -2

                                                   
Query: 15   RRCGTXXPTHQMERETPRRTGAGAAAKSMSTTAGYLARR 131
            R C +      M+R +PR + A A+  S ST  G L  R
Sbjct: 3141 RSCSSTRAAPDMDRRSPRCSTAWASFPSSSTRRGILRSR 3025


>NCR_G_C2.022_1 Ncr_G_C2.022_1.seq Continuation (1 of 6) of Ncr_G_C2.022
             from base 1
          Length = 110000

 Score = 29.0 bits (57), Expect = 6.4
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +3 / -3

                                                   
Query: 36    PTHQMERETPRRTGAGAAAKSMSTTAGYLARRAGXEER 149
             P H     T  R+  G  A+   T++G   RRAG   R
Sbjct: 59934 PIHSSATRTLDRSSVGVGARHRETSSGSRCRRAGAGGR 59821


>NCR_G_C2.266 Ncr_G_C2.266
          Length = 45896

 Score = 29.0 bits (57), Expect = 6.4
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +2 / -1

                                      
Query: 428  QRRPMNXNHAFVSIPWHRPSAKDFLL 505
            Q  P N +H+ V +P+ +P  KD+ L
Sbjct: 6689 QNIPFNHSHSHVHVPFDKPCWKDYRL 6612


>NCR_G_C2.569 Ncr_G_C2.569
          Length = 192756

 Score = 25.8 bits (50), Expect(2) = 7.8
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2 / -2

                        
Query: 464   SIPWHRPSAKD 496
             S+PWHRPS  D
Sbjct: 64538 SLPWHRPSHGD 64506


 Score = 20.3 bits (38), Expect(2) = 7.8
 Identities = 6/14 (42%), Positives = 10/14 (70%)
 Frame = +2 / -3

                           
Query: 494   DFLLLFPMIACNLA 535
             DF+L+F  +AC  +
Sbjct: 64438 DFMLIFFFLACEFS 64397


>NCR_G_C2.568 Ncr_G_C2.568
          Length = 267169

 Score = 28.6 bits (56), Expect = 8.8
 Identities = 11/16 (68%), Positives = 12/16 (74%)
 Frame = +1 / -3

                              
Query: 466    HTLAPAECQGLPFAFP 513
              H LA AECQGLP + P
Sbjct: 259844 HALALAECQGLPRSCP 259797


>NCR_G_C2.684 Ncr_G_C2.684
          Length = 86140

 Score = 28.6 bits (56), Expect = 8.8
 Identities = 10/19 (52%), Positives = 13/19 (67%)
 Frame = +2 / +3

                                
Query: 566   SPPSLCFFYHGMFFATYFF 622
             SPPS+ FF+   FF  +FF
Sbjct: 59001 SPPSVFFFFFFFFFLFFFF 59057


>NCR_G_C2.494 Ncr_G_C2.494
          Length = 26238

 Score = 28.6 bits (56), Expect = 8.8
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -1 / -3

                                      
Query: 527   CMQSSGKAKGSPWHSAGARVCSQKH 453
             C Q  G  K S W  +  +VCS +H
Sbjct: 11605 CFQFRGGGKRSDWTGSQCQVCSSEH 11531


>NCR_G_C2.561 Ncr_G_C2.561
          Length = 43969

 Score = 28.6 bits (56), Expect = 8.8
 Identities = 9/21 (42%), Positives = 14/21 (65%)
 Frame = +2 / +2

                                  
Query: 560   NYSPPSLCFFYHGMFFATYFF 622
             ++ P +L FF+H  FF+ Y F
Sbjct: 29426 SFFPSTLFFFFHFFFFSKYLF 29488


  Database: /phillip/Ncr/Ncr_G
    Posted date:  Jan 24, 2002  1:55 PM
  Number of letters in database: 37,969,317
  Number of sequences in database:  995
  
Lambda     K      H
   0.318    0.135    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 55018936
Number of Sequences: 995
Number of extensions: 702301
Number of successful extensions: 45482
Number of sequences better than 10.0: 27
length of query: 294
length of database: 12,656,439
effective HSP length: 47
effective length of query: 247
effective length of database: 12,609,674
effective search space: 3114589478
effective search space used: 3114589478
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 56 (28.6 bits)