TBLASTX 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCPvsNca/blast/0941_F10_K19ZS5.seq
         (986 letters)

Database: /phillip/Ncr/Ncr_G
           995 sequences; 37,969,317 total letters

Searching....................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

NCR_G_C2.039 Ncr_G_C2.039                                              33  0.57
NCR_G_C2.370 Ncr_G_C2.370                                              32  0.79
NCR_G_C2.082 Ncr_G_C2.082                                              31  1.5
NCR_G_C2.453 Ncr_G_C2.453                                              31  1.5
NCR_G_C2.763 Ncr_G_C2.763                                              30  2.8
NCR_G_C2.820 Ncr_G_C2.820                                              30  2.8
NCR_G_C2.557 Ncr_G_C2.557                                              30  2.8
NCR_G_C2.106 Ncr_G_C2.106                                              30  3.9
NCR_G_C2.266 Ncr_G_C2.266                                              30  3.9
NCR_G_C2.894 Ncr_G_C2.894                                              30  3.9
NCR_G_C2.344 Ncr_G_C2.344                                              29  5.3
NCR_G_C2.624 Ncr_G_C2.624                                              29  5.3
NCR_G_C2.592 Ncr_G_C2.592                                              29  7.3
NCR_G_C2.684 Ncr_G_C2.684                                              29  7.3
NCR_G_C2.533 Ncr_G_C2.533                                              29  7.3
NCR_G_C2.441 Ncr_G_C2.441                                              29  10.0
NCR_G_C2.652 Ncr_G_C2.652                                              29  10.0
NCR_G_C2.112 Ncr_G_C2.112                                              29  10.0
NCR_G_C2.111 Ncr_G_C2.111                                              29  10.0
NCR_G_C2.110 Ncr_G_C2.110                                              29  10.0
NCR_G_C2.270 Ncr_G_C2.270                                              29  10.0

>NCR_G_C2.039 Ncr_G_C2.039
          Length = 12103

 Score = 32.7 bits (65), Expect = 0.57
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -2 / +3

                                              
Query: 493  ESKPKANNHPSTKKAGFCLDKGIPPPHGQGF*IC 392
            E+K K N HP +    FC+  GIPP   +   IC
Sbjct: 2475 ENKKKRNRHPIS*IRYFCVSSGIPPTTPKYIDIC 2576


>NCR_G_C2.370 Ncr_G_C2.370
          Length = 51892

 Score = 32.2 bits (64), Expect = 0.79
 Identities = 15/44 (34%), Positives = 28/44 (63%)
 Frame = -1 / +3

                                                         
Query: 347   PALLNSTSVISEAMWRLAIGSR*TWVAKRPSYVFKRSMTLPSSL 216
             P +LNS+S++ +    L + + *T + ++P+Y+ K   T P+SL
Sbjct: 48951 PLILNSSSLLRKRRLLLNL*TV*TKIRRQPNYLLK*EETWPNSL 49082


>NCR_G_C2.082 Ncr_G_C2.082
          Length = 85760

 Score = 31.3 bits (62), Expect = 1.5
 Identities = 15/45 (33%), Positives = 23/45 (50%)
 Frame = -1 / +3

                                                         
Query: 230  LPSSLDKRRILLEGSKEPFHMPNSCLQVILQNRAQ*IPFASVVFP 96
            LP+SLD+  +   GSK  F +P+S + V+       +   S  FP
Sbjct: 5343 LPNSLDQDTLFWIGSKIVFPLPSSSMAVLFSPYVVELVLCSTAFP 5477


>NCR_G_C2.453 Ncr_G_C2.453
          Length = 52404

 Score = 31.3 bits (62), Expect = 1.5
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = -1 / +1

                                         
Query: 164   NSCLQVILQNRAQ*IPFASVVFPFENAV 81
             N+C+ ++L++R  *+P  S + PF N +
Sbjct: 47494 NACMTIVLRSRGD*LPRTSQMPPFSNTI 47577


>NCR_G_C2.763 Ncr_G_C2.763
          Length = 34778

 Score = 30.4 bits (60), Expect = 2.8
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +3 / -2

                                               
Query: 87    IFKGKYYTCKRYLLGPVLQYYLQTGVWHVERLFA 188
             IF      C  ++L P+  +YL T +WH+ R  A
Sbjct: 12208 IFGDHLELCYFFILIPICFFYLFTALWHMSRTCA 12107


>NCR_G_C2.820 Ncr_G_C2.820
          Length = 11581

 Score = 30.4 bits (60), Expect = 2.8
 Identities = 14/32 (43%), Positives = 17/32 (52%)
 Frame = +3 / -1

                                            
Query: 504  SSVILPSSFFDYFWDPFLAGFLHIALLSFYNN 599
            SS I   SFF +F+  F +  L I  L F NN
Sbjct: 4441 SSTIFKISFFFFFFSSFSSFLLSIIYLPFPNN 4346


>NCR_G_C2.557 Ncr_G_C2.557
          Length = 84113

 Score = 30.4 bits (60), Expect = 2.8
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +3 / -2

                                  
Query: 399   QNPCPCGGGIPLSRQKPAFFV 461
             QNPCPC  G+     KPA+ V
Sbjct: 48961 QNPCPCAPGLFKKIDKPAWVV 48899


>NCR_G_C2.106 Ncr_G_C2.106
          Length = 177512

 Score = 29.9 bits (59), Expect = 3.9
 Identities = 13/48 (27%), Positives = 20/48 (41%)
 Frame = -3 / +3

                                                             
Query: 357   CRVTCSLELHISNIRGHVEASHWLSMNLGGKTTIICLQTFNDTAIFIR 214
             C+   S   H+  +R HV   HW    L  +  + C +   +T  F R
Sbjct: 24483 CKTLASNHFHLRCLRSHVLHPHWAPWMLAQQAILACPRQC*NTTYFGR 24626


>NCR_G_C2.266 Ncr_G_C2.266
          Length = 45896

 Score = 29.9 bits (59), Expect = 3.9
 Identities = 19/59 (32%), Positives = 27/59 (45%)
 Frame = -1 / +2

                                                                        
Query: 464   VNKESRFLP*QGYPPPTRTRVLNLCVTCSWVSDSINVV*PALLNSTSVISEAMWRLAIG 288
             V+  SR +   G P   R  V  L   CSW   S ++V   L    S +++  WRL +G
Sbjct: 33833 VSVASRLVCDSGCPRYIRVFVQPLDQCCSWRVISRSMVFSILRR*RSCVNDESWRLGLG 34009


>NCR_G_C2.894 Ncr_G_C2.894
          Length = 16571

 Score = 29.9 bits (59), Expect = 3.9
 Identities = 11/24 (45%), Positives = 13/24 (53%)
 Frame = +3 / -2

                                    
Query: 522  SSFFDYFWDPFLAGFLHIALLSFY 593
            S +  YF+ PF  G LH   L FY
Sbjct: 5650 SLYLSYFFSPFSYGLLHAVALVFY 5579


>NCR_G_C2.344 Ncr_G_C2.344
          Length = 99019

 Score = 29.5 bits (58), Expect = 5.3
 Identities = 12/39 (30%), Positives = 20/39 (50%)
 Frame = +2 / +3

                                                    
Query: 155   NRSLACGKALCCLLVESVFYLMKMAVSLNV*RHMMVVLP 271
             NR    G+  CCL+ E +   + + + L+V  H  + LP
Sbjct: 59508 NRDWDTGQD*CCLVYEPLT*WLSVRLKLSVPTHQFLSLP 59624


>NCR_G_C2.624 Ncr_G_C2.624
          Length = 145122

 Score = 29.5 bits (58), Expect = 5.3
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +3 / -2

                             
Query: 369   AHP*TGDAQIQNPCPC 416
             AHP T    IQ PCPC
Sbjct: 64061 AHPATWKVSIQEPCPC 64014


>NCR_G_C2.592 Ncr_G_C2.592
          Length = 186696

 Score = 29.0 bits (57), Expect = 7.3
 Identities = 9/19 (47%), Positives = 12/19 (62%)
 Frame = +1 / +2

                                 
Query: 124    YWARFCNITCKQEFGMWKG 180
              Y   FC  T +QE G+W+G
Sbjct: 108719 YGEYFCGATIRQELGIWEG 108775


>NCR_G_C2.684 Ncr_G_C2.684
          Length = 86140

 Score = 29.0 bits (57), Expect = 7.3
 Identities = 13/34 (38%), Positives = 17/34 (49%)
 Frame = -1 / +1

                                               
Query: 374   VSDSINVV*PALLNSTSVISEAMWRLAIGSR*TW 273
             +S +I +       STS IS   WRL+ GS   W
Sbjct: 24847 ISTAIGISRAGRTGSTSQISRGAWRLSSGSTSNW 24948


>NCR_G_C2.533 Ncr_G_C2.533
          Length = 22917

 Score = 29.0 bits (57), Expect = 7.3
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2 / +1

                                     
Query: 260   VVLPPKFIESQWLASTWPLILLMW 331
             VV+PP ++ + W +  + LIL +W
Sbjct: 15538 VVVPPPYLSAPWTSLLYFLILFVW 15609


>NCR_G_C2.441 Ncr_G_C2.441
          Length = 223615

 Score = 28.6 bits (56), Expect = 10.0
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +1 / +3

                                               
Query: 358    LMESLTHEQVTHKFKTLVRVGGGYPCQGKNLLS 456
              L+   T   V    K LVR GGGY  +  NL+S
Sbjct: 192147 LLHMHTRSLVHRDLKPLVRSGGGYNTETINLIS 192245


>NCR_G_C2.652 Ncr_G_C2.652
          Length = 20586

 Score = 28.6 bits (56), Expect = 10.0
 Identities = 13/31 (41%), Positives = 16/31 (50%)
 Frame = +2 / +1

                                            
Query: 407   LSVWGGDTLVKAKTCFLC*RVIICLRFALED 499
             LSV+G  T V   TCF     +IC  F  +D
Sbjct: 14530 LSVYGFGTQVPIMTCFSLIEAVICQLFLSQD 14622


>NCR_G_C2.112 Ncr_G_C2.112
          Length = 81259

 Score = 28.6 bits (56), Expect = 10.0
 Identities = 9/17 (52%), Positives = 13/17 (75%)
 Frame = +2 / +1

                              
Query: 890   KNAVGLVVPHISIRCTV 940
             KNAVG+ +PH S+ C +
Sbjct: 13177 KNAVGIQMPHASLTCRI 13227


>NCR_G_C2.111 Ncr_G_C2.111
          Length = 322912

 Score = 28.6 bits (56), Expect = 10.0
 Identities = 15/42 (35%), Positives = 22/42 (51%)
 Frame = -1 / +1

                                                        
Query: 272    VAKRPSYVFKRSMTLPSSLDKRRILLEGSKEPFHMPNSCLQV 147
              +  RPS +   SMT  + L +  ILL   + PF +P  C Q+
Sbjct: 196309 LTNRPSMLA*ASMTHTA*LRRPEILLPSCQLPFFVPWVCSQI 196434


>NCR_G_C2.110 Ncr_G_C2.110
          Length = 102633

 Score = 28.6 bits (56), Expect = 10.0
 Identities = 10/17 (58%), Positives = 11/17 (63%)
 Frame = +3 / +3

                              
Query: 384   GDAQIQNPCPCGGGIPL 434
             GDA   NP PC GG+ L
Sbjct: 48801 GDAYSGNPSPCAGGLSL 48851


>NCR_G_C2.270 Ncr_G_C2.270
          Length = 11198

 Score = 28.6 bits (56), Expect = 10.0
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -2 / +3

                                     
Query: 496  LESKPKANNHPSTKKAGFCLDKGIP 422
            + S P   N P   +AG C  +G P
Sbjct: 6360 ISSHPSTCNQPEANEAGRCRRRGTP 6434


  Database: /phillip/Ncr/Ncr_G
    Posted date:  Jan 24, 2002  1:55 PM
  Number of letters in database: 37,969,317
  Number of sequences in database:  995
  
Lambda     K      H
   0.318    0.135    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 61854926
Number of Sequences: 995
Number of extensions: 909112
Number of successful extensions: 42461
Number of sequences better than 10.0: 21
length of query: 328
length of database: 12,656,439
effective HSP length: 47
effective length of query: 281
effective length of database: 12,609,674
effective search space: 3543318394
effective search space used: 3543318394
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 56 (28.6 bits)