TBLASTX 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCPvsNca/blast/0941_G05_M09ZS5.seq
         (860 letters)

Database: /phillip/Ncr/Ncr_G
           995 sequences; 37,969,317 total letters

Searching....................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

NCR_G_C2.190 Ncr_G_C2.190                                              35  0.072
NCR_G_C2.441 Ncr_G_C2.441                                              32  0.67
NCR_G_C2.218 Ncr_G_C2.218                                              31  1.3
NCR_G_C2.230 Ncr_G_C2.230                                              31  1.7
NCR_G_C2.344 Ncr_G_C2.344                                              31  1.7
NCR_G_C2.615 Ncr_G_C2.615                                              30  2.4
NCR_G_C2.645 Ncr_G_C2.645                                              30  2.4
NCR_G_C2.327 Ncr_G_C2.327                                              30  2.4
NCR_G_C2.312 Ncr_G_C2.312                                              30  2.4
NCR_G_C2.851 Ncr_G_C2.851                                              30  3.3
NCR_G_C2.497 Ncr_G_C2.497                                              30  3.3
NCR_G_C2.712 Ncr_G_C2.712                                              29  4.5
NCR_G_C2.053 Ncr_G_C2.053                                              29  4.5
NCR_G_C2.446 Ncr_G_C2.446                                              29  4.5
NCR_G_C2.495 Ncr_G_C2.495                                              29  4.5
NCR_G_C2.219 Ncr_G_C2.219                                              29  6.2
NCR_G_C2.465 Ncr_G_C2.465                                              29  6.2
NCR_G_C2.656 Ncr_G_C2.656                                              29  6.2
NCR_G_C2.459 Ncr_G_C2.459                                              29  6.2
NCR_G_C2.430 Ncr_G_C2.430                                              24  7.4
NCR_G_C2.897 Ncr_G_C2.897                                              29  8.5
NCR_G_C2.332 Ncr_G_C2.332                                              29  8.5
NCR_G_C2.502 Ncr_G_C2.502                                              29  8.5
NCR_G_C2.538 Ncr_G_C2.538                                              29  8.5
NCR_G_C2.434 Ncr_G_C2.434                                              29  8.5
NCR_G_C2.423 Ncr_G_C2.423                                              29  8.5
NCR_G_C2.436 Ncr_G_C2.436                                              29  8.5
NCR_G_C2.368 Ncr_G_C2.368                                              29  8.5
NCR_G_C2.298 Ncr_G_C2.298                                              26  9.6

>NCR_G_C2.190 Ncr_G_C2.190
          Length = 20582

 Score = 35.4 bits (71), Expect = 0.072
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +1 / +1

                                             
Query: 139  YNTLVACSKFRGLRKTRRRNDNDTGGTKIRIGP 237
            Y      ++FRG R  RR+ DND    KI +GP
Sbjct: 8809 YRLTTGFARFRGFRFARRKQDNDFQKAKICVGP 8907


>NCR_G_C2.441 Ncr_G_C2.441
          Length = 223615

 Score = 32.2 bits (64), Expect = 0.67
 Identities = 11/27 (40%), Positives = 15/27 (54%)
 Frame = -3 / +2

                                         
Query: 750    WETRISIFLPEDIHAHCCLFSSRTILH 670
              W TR+ + LP     HCC   SR ++H
Sbjct: 139892 WHTRL*LLLPFSRIQHCCFKLSRNLMH 139972


>NCR_G_C2.218 Ncr_G_C2.218
          Length = 129490

 Score = 31.3 bits (62), Expect = 1.3
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +2 / +2

                                                             
Query: 479   LSDNHWILAVINLTPNTIEIYDSNLEVKEGEHPHRVMLENMASNLQKS 622
             LS N  + AV    P   E+Y S  ++K   HP+ +  +  A  + KS
Sbjct: 89321 LSQNSGMRAVPTRDPQLYELYWSPAQIKARAHPNVIAAQKFAMRIWKS 89464


 Score = 28.1 bits (55), Expect(2) = 2.7
 Identities = 10/24 (41%), Positives = 14/24 (57%)
 Frame = +1 / +3

                                     
Query: 457   *AAISAYTIGQPLDSGCH*PHAKH 528
             *  I+ YT+G+P+ S  H P   H
Sbjct: 59520 *GGIARYTVGRPVQSSLHCPATSH 59591


 Score = 19.8 bits (37), Expect(2) = 2.7
 Identities = 7/13 (53%), Positives = 8/13 (60%)
 Frame = +1 / +1

                          
Query: 559   QRR*TPAQGYVGE 597
             Q R T AQG  G+
Sbjct: 59578 QPRATSAQGTAGQ 59616


>NCR_G_C2.230 Ncr_G_C2.230
          Length = 223934

 Score = 30.8 bits (61), Expect = 1.7
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3 / +1

                           
Query: 819   TGFSPCCWPCSLPS 860
             +G  PC WPCS PS
Sbjct: 80764 SGLFPCSWPCSCPS 80805


>NCR_G_C2.344 Ncr_G_C2.344
          Length = 99019

 Score = 30.8 bits (61), Expect = 1.7
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -1 / +2

                                     
Query: 140   YMSFNFFTRYCFFFMSSDNLRRSP 69
             + SF FF  YCFFF+   +L  SP
Sbjct: 74762 HRSFCFFPLYCFFFLFCGDLFSSP 74833


>NCR_G_C2.615 Ncr_G_C2.615
          Length = 130067

 Score = 30.4 bits (60), Expect = 2.4
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -1 / -1

                       
Query: 608   CWPCSPT*PC 579
             CWPC PT PC
Sbjct: 85502 CWPCCPTRPC 85473


 Score = 29.0 bits (57), Expect = 6.2
 Identities = 11/17 (64%), Positives = 13/17 (75%)
 Frame = -1 / +1

                              
Query: 821   SPCCFSGECYFLFSGLL 771
             SPC +S  C+FLFS LL
Sbjct: 75937 SPCRYSILCFFLFSSLL 75987


>NCR_G_C2.645 Ncr_G_C2.645
          Length = 53172

 Score = 30.4 bits (60), Expect = 2.4
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +1 / -1

                                                          
Query: 73    DRRRLSELIKKKQYLVKKLNDMYNTLVACSKFRGLRKTRRRNDND 207
             DRR  + L+   + L K+L D+Y   +A       R T R +D D
Sbjct: 10470 DRRYTNNLVSNSRRLAKRLRDLYRRALASPYVVDQRDTVRFDDID 10336


>NCR_G_C2.327 Ncr_G_C2.327
          Length = 167595

 Score = 30.4 bits (60), Expect = 2.4
 Identities = 18/55 (32%), Positives = 28/55 (50%)
 Frame = -3 / +1

                                                                    
Query: 693   FSSRTILHGKSVNAKALLXRQSFNDFWRLLAMFSNITLCGCSPSLTSKLES*ISI 529
             +S+ T +HGK     A   ++S     RL    + I LCG  P+   K+ +*+SI
Sbjct: 73810 WSTVTGIHGKGYATYAQEEQRSMTPARRLCHSTTPIYLCGALPAPNDKILA*LSI 73974


>NCR_G_C2.312 Ncr_G_C2.312
          Length = 102336

 Score = 30.4 bits (60), Expect = 2.4
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3 / +3

                                              
Query: 282   RKDVQKYDVVTVRGTYV*LGIKDQDYIGPDYYN 380
             R   Q    +TVR  +V*+GI    ++ PD Y+
Sbjct: 57219 RPSKQSGSAITVRSRFV*IGICILKFVRPDIYS 57317


>NCR_G_C2.851 Ncr_G_C2.851
          Length = 16919

 Score = 29.9 bits (59), Expect = 3.3
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2 / -2

                                            
Query: 677   IVLLENKQQWAWMSSGRNMLILVSHRFHDLN 769
             ++LL+  Q W WM   R  ++L+   F  LN
Sbjct: 13414 VILLDWSQPWKWMRQLREWILLLRTVFQKLN 13322


>NCR_G_C2.497 Ncr_G_C2.497
          Length = 192966

 Score = 29.9 bits (59), Expect = 3.3
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = +1 / -2

                                        
Query: 766    QSRRPENKK*HSPEKQHGLDSPHVVG 843
              Q RRP+    HSP      DSPHV G
Sbjct: 132368 Q*RRPDQNPSHSPRTTTPTDSPHVGG 132291


>NCR_G_C2.712 Ncr_G_C2.712
          Length = 37287

 Score = 29.5 bits (58), Expect = 4.5
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -2 / +1

                                                    
Query: 529  CVWREVNDSQNPMVVR*CRQK*LLNILKWQLSKLLAEICM 410
            C W EV++  +   V  CR+  LL++  + L   L  IC+
Sbjct: 6115 CTWSEVDNPSHQRHVVTCRRSFLLSLFFFYLRAFLCLICI 6234


>NCR_G_C2.053 Ncr_G_C2.053
          Length = 105864

 Score = 29.5 bits (58), Expect = 4.5
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = +3 / -2

                        
Query: 828   SPCCWPCSLPS 860
             S CCWP SLPS
Sbjct: 66911 SDCCWPASLPS 66879


>NCR_G_C2.446 Ncr_G_C2.446
          Length = 145200

 Score = 29.5 bits (58), Expect = 4.5
 Identities = 15/56 (26%), Positives = 25/56 (43%)
 Frame = -3 / -3

                                                                      
Query: 840    NNMGRIQSVLFFRGMLFFIFRPPGLRS*KRWETRISIFLPEDIHAHCCLFSSRTIL 673
              +N  +  S +FF   LF + +PP   +   W    ++FLP   + H  +    T L
Sbjct: 110920 DNNRKYLSSIFFSISLFGLCKPPWFETCILW*NSSTLFLPRQSNRHAAIGLMMTTL 110753


>NCR_G_C2.495 Ncr_G_C2.495
          Length = 14943

 Score = 29.5 bits (58), Expect = 4.5
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +1 / -3

                                 
Query: 292  CKNMMWLLSVALMYDWGSKTK 354
            CKN +W++S  L++ W +  K
Sbjct: 2020 CKNTLWIISTWLLWQWETDIK 1958


>NCR_G_C2.219 Ncr_G_C2.219
          Length = 282514

 Score = 29.0 bits (57), Expect = 6.2
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = +3 / +1

                                
Query: 801  PGKTTRTGFSPCCWPCSLPS 860
            P    R    PC WPCSL S
Sbjct: 1828 PPSPLRCAAKPCIWPCSLRS 1887


>NCR_G_C2.465 Ncr_G_C2.465
          Length = 18593

 Score = 29.0 bits (57), Expect = 6.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3 / +1

                          
Query: 573  TRTGLCWRTWPAIS 614
            T +GLCW  WP +S
Sbjct: 7471 TPSGLCWNLWPKVS 7512


>NCR_G_C2.656 Ncr_G_C2.656
          Length = 16123

 Score = 29.0 bits (57), Expect = 6.2
 Identities = 13/54 (24%), Positives = 24/54 (44%)
 Frame = +3 / +1

                                                                  
Query: 585  LCWRTWPAISKNH*MIVXTRVPSHLLISHEVLFYWKTNNNGHGCLQEEICLSLF 746
            L W T+P++   +  +         L+   ++  W T++  H  L+E    SLF
Sbjct: 3304 LAWHTFPSVLATNQQLPSLHFLQFALVLFSLVSSWHTSDPHHTSLEERRVPSLF 3465


>NCR_G_C2.459 Ncr_G_C2.459
          Length = 28434

 Score = 29.0 bits (57), Expect = 6.2
 Identities = 12/46 (26%), Positives = 22/46 (47%)
 Frame = +3 / -2

                                                          
Query: 342  IKDQDYIGPDYYNRIAKKEINATMHISARSLESCHFKMLSSYFCLH 479
            + DQ +  P + N +A++     +  S++  E C F+     F LH
Sbjct: 5618 LHDQSHKKPAWRNWLARQTFKKPVKRSSKPSECCEFESRRGRFFLH 5481


>NCR_G_C2.430 Ncr_G_C2.430
          Length = 226714

 Score = 24.4 bits (47), Expect(2) = 7.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1 / -2

                         
Query: 815    CCFSGECYFLF 783
              CC SG C F+F
Sbjct: 206592 CCLSGWCMFIF 206560


 Score = 21.7 bits (41), Expect(2) = 7.4
 Identities = 5/7 (71%), Positives = 5/7 (71%)
 Frame = -1 / -2

                     
Query: 833    WGESSPC 813
              WG SS C
Sbjct: 206634 WGTSSSC 206614


>NCR_G_C2.897 Ncr_G_C2.897
          Length = 21719

 Score = 28.6 bits (56), Expect = 8.5
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -1 / -2

                                        
Query: 317  DSNHIIFLHIFPFGIRHYTNSLSVTEAG 234
            D   ++FLH+FP G   +   LS T  G
Sbjct: 8593 DGESVLFLHVFPVGQEIFEIVLSPTNRG 8510


>NCR_G_C2.332 Ncr_G_C2.332
          Length = 41927

 Score = 28.6 bits (56), Expect = 8.5
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +1 / +2

                                               
Query: 85    LSELIKKKQYLVKKLNDMYNTLVACSKFRGLRKT 186
             LSEL+  +  LV+K  D      +CS  RGL  T
Sbjct: 31736 LSELVLARVQLVRKAFDGCQYWTSCSTVRGLHNT 31837


>NCR_G_C2.502 Ncr_G_C2.502
          Length = 86916

 Score = 28.6 bits (56), Expect = 8.5
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2 / +2

                              
Query: 220  WYHLCHYRCVVVSYVNLG 167
            WY  C  RCV+  Y  LG
Sbjct: 1370 WYRFCRCRCVIHRYGKLG 1423


>NCR_G_C2.538 Ncr_G_C2.538
          Length = 60272

 Score = 28.6 bits (56), Expect = 8.5
 Identities = 11/30 (36%), Positives = 18/30 (59%)
 Frame = -3 / -1

                                           
Query: 573   CSPSLTSKLES*ISIVFGVRLMTARIQWLS 484
             C+ ++ S   S  S+VF +RL+   +QW S
Sbjct: 33686 CAMAMPSVCHSLASVVFVIRLVDVAVQWKS 33597


>NCR_G_C2.434 Ncr_G_C2.434
          Length = 52670

 Score = 28.6 bits (56), Expect = 8.5
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +3 / -1

                        
Query: 807  KTTRTGFSPCCW 842
            +   TG +PCCW
Sbjct: 6320 QVVNTGLNPCCW 6285


>NCR_G_C2.423 Ncr_G_C2.423
          Length = 97362

 Score = 28.6 bits (56), Expect = 8.5
 Identities = 10/37 (27%), Positives = 22/37 (59%)
 Frame = +1 / -3

                                                  
Query: 301   MMWLLSVALMYDWGSKTKIILDQTIITELLKRK*MQP 411
             ++W  +VA+++ W SK + I+ +  +T + K    +P
Sbjct: 55180 LLWCSNVAMLWSWLSKARSIICRIAMTMMQKENNHRP 55070


>NCR_G_C2.436 Ncr_G_C2.436
          Length = 76402

 Score = 28.6 bits (56), Expect = 8.5
 Identities = 14/31 (45%), Positives = 18/31 (57%)
 Frame = +2 / +1

                                            
Query: 536   IYDSNLEVKEGEHPHRVMLENMASNLQKSLN 628
             IY S LE +    PH  +L+ +AS   KSLN
Sbjct: 32023 IYASTLETRHRSMPHY*VLQ*LASLRSKSLN 32115


>NCR_G_C2.368 Ncr_G_C2.368
          Length = 44122

 Score = 28.6 bits (56), Expect = 8.5
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = -3 / +1

                                      
Query: 738   ISIFLPEDIHAHCCLFSSRTILHGK 664
             I I LP+++H+ CC  ++   +HG+
Sbjct: 39589 IQIRLPQNLHSRCCRGATDIGIHGR 39663


>NCR_G_C2.298 Ncr_G_C2.298
          Length = 253576

 Score = 26.3 bits (51), Expect(2) = 9.6
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +3 / +2

                         
Query: 585   LCWRTWPAISKN 620
             +CWR  P +S N
Sbjct: 24287 ICWRN*PTVSSN 24322


 Score = 19.4 bits (36), Expect(2) = 9.6
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +1 / +1

                                    
Query: 706   GMDVFRKKYAYPCFPPFS*SQSR 774
             G  V R       + PFS S+SR
Sbjct: 24373 GCHVLRASQIAKVWLPFSRSRSR 24441


  Database: /phillip/Ncr/Ncr_G
    Posted date:  Jan 24, 2002  1:55 PM
  Number of letters in database: 37,969,317
  Number of sequences in database:  995
  
Lambda     K      H
   0.318    0.135    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 81139829
Number of Sequences: 995
Number of extensions: 1249501
Number of successful extensions: 65959
Number of sequences better than 10.0: 29
length of query: 286
length of database: 12,656,439
effective HSP length: 47
effective length of query: 239
effective length of database: 12,609,674
effective search space: 3013712086
effective search space used: 3013712086
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 56 (28.6 bits)