TBLASTX 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCPvsNca/blast/0941_G09_M17ZS5.seq
         (1004 letters)

Database: /phillip/Ncr/Ncr_G
           995 sequences; 37,969,317 total letters

Searching....................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

NCR_G_C2.101 Ncr_G_C2.101                                              36  0.063
NCR_G_C2.070 Ncr_G_C2.070                                              36  0.063
NCR_G_C2.059 Ncr_G_C2.059                                              33  0.42
NCR_G_C2.659 Ncr_G_C2.659                                              33  0.42
NCR_G_C2.023 Ncr_G_C2.023                                              30  1.0
NCR_G_C2.654 Ncr_G_C2.654                                              28  1.1
NCR_G_C2.571 Ncr_G_C2.571                                              32  1.1
NCR_G_C2.194 Ncr_G_C2.194                                              31  1.5
NCR_G_C2.042_4 Ncr_G_C2.042_4.seq Continuation (4 of 6) of Ncr_G...    31  2.1
NCR_G_C2.393 Ncr_G_C2.393                                              31  2.1
NCR_G_C2.169 Ncr_G_C2.169                                              31  2.1
NCR_G_C2.455 Ncr_G_C2.455                                              30  2.8
NCR_G_C2.238 Ncr_G_C2.238                                              30  3.9
NCR_G_C2.762 Ncr_G_C2.762                                              30  3.9
NCR_G_C2.423 Ncr_G_C2.423                                              30  3.9
NCR_G_C2.192 Ncr_G_C2.192                                              30  3.9
NCR_G_C2.133 Ncr_G_C2.133                                              30  3.9
NCR_G_C2.072 Ncr_G_C2.072                                              30  3.9
NCR_G_C2.321 Ncr_G_C2.321                                              30  3.9
NCR_G_C2.043 Ncr_G_C2.043                                              29  5.4
NCR_G_C2.583 Ncr_G_C2.583                                              29  5.4
NCR_G_C2.684 Ncr_G_C2.684                                              29  5.4
NCR_G_C2.148 Ncr_G_C2.148                                              29  5.4
NCR_G_C2.414 Ncr_G_C2.414                                              29  6.2
NCR_G_C2.646 Ncr_G_C2.646                                              29  7.4
NCR_G_C2.053 Ncr_G_C2.053                                              29  7.4

>NCR_G_C2.101 Ncr_G_C2.101
          Length = 209184

 Score = 35.9 bits (72), Expect = 0.063
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = -3 / -1

                                                                    
Query: 162    CECGGVEAALPASTARQRKNGYRTSIAMAP*HAQFDVRCVDYALERDRXRTEAL 1
              C  GG++ A  A  + +R N ++ ++  A  HA+ +V   D  +E  R +TE L
Sbjct: 169941 CSDGGMQDAGSAFVSGRRLNQFQAAMQNAVWHARLEVNVTDQRIECRRAKTEEL 169780


>NCR_G_C2.070 Ncr_G_C2.070
          Length = 89843

 Score = 35.9 bits (72), Expect = 0.063
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +3 / +2

                                           
Query: 24    LARGHSPHTAHQTERAMEPWLWRFCTRSSS 113
             LA GHSPH A+Q+      W    C+ SSS
Sbjct: 28058 LAEGHSPHDANQSNMERRRWTLNSCSPSSS 28147


>NCR_G_C2.059 Ncr_G_C2.059
          Length = 89435

 Score = 33.1 bits (66), Expect = 0.42
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +3 / +3

                                   
Query: 66    RAMEPWLWRFCTRSSSASPCSP 131
             R +  W+WR  + SS+ SPCSP
Sbjct: 54783 RYLRLWVWRSSSLSSACSPCSP 54848


>NCR_G_C2.659 Ncr_G_C2.659
          Length = 33499

 Score = 33.1 bits (66), Expect = 0.42
 Identities = 25/83 (30%), Positives = 34/83 (40%)
 Frame = -3 / +3

                                                                         
Query: 324   LSNGGSNPYTSEGRKTAWSEWMAPVT*AL*PAKKRTTFPASTLAAVKSGGLSRHCECGGV 145
             LS   + P ++    TA S   +PVT  L      T  P S L +V     SR     G 
Sbjct: 24624 LSTSATPPLSTR*ASTATSSVSSPVTRFLTTPPTPTLLPTSRLLSVTPRTTSRTTSSVGW 24803

                                    
Query: 144   EAALPASTARQRKNGYRTSIAMA 76
               A+P +T  +    +RTS   A
Sbjct: 24804 VLAMPPTTTLRSVPRWRTSSTAA 24872


>NCR_G_C2.023 Ncr_G_C2.023
          Length = 117328

 Score = 29.9 bits (59), Expect(2) = 1.0
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -3 / -3

                                    
Query: 207   ASTLAAVKSGGLSRHCECGGVEA 139
             A T A V+S    R CECGG +A
Sbjct: 22631 ADTEARVRSAQRGRFCECGGCQA 22563


 Score = 19.8 bits (37), Expect(2) = 1.0
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2 / -3

                            
Query: 322   QQRRFESVHVGGQED 278
             +QRR + V VGG  +
Sbjct: 22691 KQRRLDGVAVGGSAE 22647


>NCR_G_C2.654 Ncr_G_C2.654
          Length = 73204

 Score = 27.6 bits (54), Expect(2) = 1.1
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = +3 / +3

                                                
Query: 789   NIPLGTLPRVPYRIGVNNY*XKPFFSFRPTSFXLR 893
             ++PL   P  PYR    +    P F F P  F LR
Sbjct: 14931 SLPLPMPPYPPYRCRFPSLAASPTFRFHPHRFLLR 15035


 Score = 22.1 bits (42), Expect(2) = 1.1
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1 / +1

                             
Query: 730   RFLRLVPTTVLFPFFS 777
             +F RLV  T +FPF S
Sbjct: 14896 QFRRLVHPTPVFPFLS 14943


>NCR_G_C2.571 Ncr_G_C2.571
          Length = 2854

 Score = 31.8 bits (63), Expect = 1.1
 Identities = 14/47 (29%), Positives = 24/47 (50%)
 Frame = +3 / +2

                                                           
Query: 609  YFTFYLFQLFRISYTFXXXXXXSLSISLNAWFLRRIKLISAISASRS 749
            Y+ +YL+  +  SY++      SLS+SL+        L  ++S S S
Sbjct: 1751 YYLYYLYYYYSYSYSYSLSLSLSLSLSLSLSLSLSFSLSLSLSLSLS 1891


>NCR_G_C2.194 Ncr_G_C2.194
          Length = 74501

 Score = 31.3 bits (62), Expect = 1.5
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +2 / -3

                                 
Query: 110   LCLAVLAGRAASTPPHSQCL 169
             LC+ +L G  ASTPP S CL
Sbjct: 72240 LCVEMLVGATASTPPLSGCL 72181


>NCR_G_C2.042_4 Ncr_G_C2.042_4.seq Continuation (4 of 6) of Ncr_G_C2.042
             from base 300001
          Length = 110000

 Score = 30.8 bits (61), Expect = 2.1
 Identities = 14/32 (43%), Positives = 18/32 (55%)
 Frame = +3 / +1

                                             
Query: 27    ARGHSPHTAHQTERAMEPWLWRFCTRSSSASP 122
             AR  S   AH++  +  P LW+    SSSASP
Sbjct: 51139 ARPFSAAMAHRSSGSSRPLLWQHIRGSSSASP 51234


>NCR_G_C2.393 Ncr_G_C2.393
          Length = 64366

 Score = 30.8 bits (61), Expect = 2.1
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = -1 / -3

                                 
Query: 62    SLMCGVWTMPSSEIVSELRP 3
             ++MC  W++P++ +VS LRP
Sbjct: 41528 NVMCPCWSVPTAAVVSRLRP 41469


>NCR_G_C2.169 Ncr_G_C2.169
          Length = 54533

 Score = 30.8 bits (61), Expect = 2.1
 Identities = 15/39 (38%), Positives = 20/39 (50%)
 Frame = -2 / +1

                                                    
Query: 307   ESVHVGGQEDGLVGVDGASDVSLVAGEKKDDLSRLDPGG 191
             + + +GG  DGLVG++ A  V  V  E   D  RL   G
Sbjct: 42970 DGLDLGGGADGLVGLEAALGVDEVGSEDGVDEGRLAEAG 43086


>NCR_G_C2.455 Ncr_G_C2.455
          Length = 67023

 Score = 30.4 bits (60), Expect = 2.8
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +3 / -1

                                  
Query: 39    SPHTAHQTERAMEPWLWRFCT 101
             SP +   T R M P+LWR CT
Sbjct: 12549 SPASQPTTARRMGPYLWRLCT 12487


>NCR_G_C2.238 Ncr_G_C2.238
          Length = 254242

 Score = 29.9 bits (59), Expect = 3.9
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = -2 / -3

                                          
Query: 103    RVQNLHSHGSIARSV*CAVCGLCPRARS 20
              RVQ   SH    R++* + C LCPR RS
Sbjct: 121754 RVQAPSSHLRCPRAL*ASACRLCPR*RS 121671


>NCR_G_C2.762 Ncr_G_C2.762
          Length = 89157

 Score = 29.9 bits (59), Expect = 3.9
 Identities = 10/26 (38%), Positives = 12/26 (45%)
 Frame = +3 / +2

                                       
Query: 3     GPQF*XDLARGHSPHTAHQTERAMEP 80
             GP F   L R + P    +TER   P
Sbjct: 81278 GPAFAGLLGRDNGPEAKRETERCQSP 81355


>NCR_G_C2.423 Ncr_G_C2.423
          Length = 97362

 Score = 29.9 bits (59), Expect = 3.9
 Identities = 11/40 (27%), Positives = 16/40 (39%)
 Frame = -3 / -3

                                                     
Query: 198   LAAVKSGGLSRHCECGGVEAALPASTARQRKNGYRTSIAM 79
             +  +KS    R+C C      LP    R  +NG    I +
Sbjct: 73288 VGVIKSSDRERNCSCTSTPVGLPQDQRRSHRNGTACEIPL 73169


>NCR_G_C2.192 Ncr_G_C2.192
          Length = 20973

 Score = 29.9 bits (59), Expect = 3.9
 Identities = 15/42 (35%), Positives = 16/42 (37%)
 Frame = +3 / -2

                                                       
Query: 6     PQF*XDLARGHSPHTAHQTERAMEPWLWRFCTRSSSASPCSP 131
             PQF*  L   H  H  H    A+   LW       S  P SP
Sbjct: 11258 PQF*LWLQNTHPSHLPHSMTMAVSDQLWLMAWHRFSLPPQSP 11133


>NCR_G_C2.133 Ncr_G_C2.133
          Length = 61891

 Score = 29.9 bits (59), Expect = 3.9
 Identities = 11/27 (40%), Positives = 12/27 (43%)
 Frame = +3 / -3

                                        
Query: 33    GHSPHTAHQTERAMEPWLWRFCTRSSS 113
             GHSP T     R    W WR   R +S
Sbjct: 42251 GHSPRTLPSPPRGRRRWCWRLKRREAS 42171


>NCR_G_C2.072 Ncr_G_C2.072
          Length = 33319

 Score = 29.9 bits (59), Expect = 3.9
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3 / +3

                         
Query: 57  QTERAMEPWLWRFC 98
           Q +RA  PWLWR C
Sbjct: 99  QLKRASAPWLWRIC 140


>NCR_G_C2.321 Ncr_G_C2.321
          Length = 66076

 Score = 29.9 bits (59), Expect = 3.9
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +3 / -1

                                        
Query: 798   LGTLPRVPYRIGVNNY*XKPFFSFRPT 878
             +G LPR  YRI V +      F FRPT
Sbjct: 47839 MGRLPRTHYRIAVRHISWFSLFRFRPT 47759


>NCR_G_C2.043 Ncr_G_C2.043
          Length = 199771

 Score = 29.5 bits (58), Expect = 5.4
 Identities = 14/31 (45%), Positives = 15/31 (48%)
 Frame = +3 / +2

                                             
Query: 36     HSPHTAHQTERAMEPWLWRFCTRSSSASPCS 128
              HS  TAH    +  PW    CT S S SP S
Sbjct: 191534 HSSRTAHPGPPSARPWARGRCTSS*SWSPWS 191626


>NCR_G_C2.583 Ncr_G_C2.583
          Length = 64275

 Score = 29.5 bits (58), Expect = 5.4
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3 / +1

                                       
Query: 819   VRVARYQAVCSSVIREKGKKNSSWNE 742
             VR  R   +C  V+R+KGK   SW +
Sbjct: 20722 VRTHRQSHICLGVVRKKGKL*GSWRK 20799


>NCR_G_C2.684 Ncr_G_C2.684
          Length = 86140

 Score = 29.5 bits (58), Expect = 5.4
 Identities = 9/22 (40%), Positives = 14/22 (62%)
 Frame = +1 / -2

                                   
Query: 511   VLTLRGACDHCLRIVSKAGALG 576
             V  + G+C HCL  ++  GA+G
Sbjct: 50655 VTQISGSCSHCLSTIASRGAVG 50590


>NCR_G_C2.148 Ncr_G_C2.148
          Length = 98105

 Score = 29.5 bits (58), Expect = 5.4
 Identities = 11/29 (37%), Positives = 15/29 (50%)
 Frame = +3 / -1

                                          
Query: 36    HSPHTAHQTERAMEPWLWRFCTRSSSASP 122
             H PH   ++ R  +   WRF TR S  +P
Sbjct: 33182 HGPHRRSRSRRLPKRDQWRFPTRQSGTTP 33096


>NCR_G_C2.414 Ncr_G_C2.414
          Length = 42005

 Score = 28.6 bits (56), Expect(2) = 6.2
 Identities = 10/19 (52%), Positives = 12/19 (62%)
 Frame = +2 / -2

                                
Query: 650   YICVRCSSITIYLFKCVVS 706
             YIC  C  IT+Y F+ V S
Sbjct: 35236 YICSNCVGITLYKFRVVAS 35180


 Score = 18.5 bits (34), Expect(2) = 6.2
 Identities = 6/14 (42%), Positives = 10/14 (70%)
 Frame = +2 / -3

                           
Query: 620   LSFSVISHLIYICV 661
             LSF V + +IY+ +
Sbjct: 35262 LSFLVFNRVIYVVI 35221


>NCR_G_C2.646 Ncr_G_C2.646
          Length = 41756

 Score = 29.0 bits (57), Expect = 7.4
 Identities = 12/29 (41%), Positives = 16/29 (54%)
 Frame = -2 / -2

                                          
Query: 127   EHGEAEEERVQNLHSHGSIARSV*CAVCG 41
             E+GEA+  R   +HSH     S+   VCG
Sbjct: 29374 ENGEAKSRRSNTIHSHFLSITSLVTVVCG 29288


>NCR_G_C2.053 Ncr_G_C2.053
          Length = 105864

 Score = 29.0 bits (57), Expect = 7.4
 Identities = 23/64 (35%), Positives = 28/64 (42%)
 Frame = +3 / +3

                                                                         
Query: 630   QLFRISYTFXXXXXXSLSISLNAWFLRRIKLISAISASRSNYCSFSLFLL*HSNIPLGTL 809
             +L R S         SLS+SL+    R   L  + S SRS   S S   L  S  PL + 
Sbjct: 17214 ELRRRSSRMSRSLSLSLSLSLSLSLFRSRSLSRSRSRSRSRSRSRSRRSLSLSRSPLSSR 17393

                 
Query: 810   PRVP 821
             PR P
Sbjct: 17394 PRSP 17405


  Database: /phillip/Ncr/Ncr_G
    Posted date:  Jan 24, 2002  1:55 PM
  Number of letters in database: 37,969,317
  Number of sequences in database:  995
  
Lambda     K      H
   0.318    0.135    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 79051532
Number of Sequences: 995
Number of extensions: 1079091
Number of successful extensions: 59772
Number of sequences better than 10.0: 26
length of query: 334
length of database: 12,656,439
effective HSP length: 49
effective length of query: 285
effective length of database: 12,607,684
effective search space: 3593189940
effective search space used: 3593189940
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 56 (28.6 bits)