TBLASTX 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCPvsNca/blast/0941_H03_O05ZS5.seq
         (896 letters)

Database: /phillip/Ncr/Ncr_G
           995 sequences; 37,969,317 total letters

Searching....................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

NCR_G_C2.488 Ncr_G_C2.488                                              27  0.29
NCR_G_C2.187 Ncr_G_C2.187                                              33  0.37
NCR_G_C2.899 Ncr_G_C2.899                                              31  1.3
NCR_G_C2.785 Ncr_G_C2.785                                              31  1.3
NCR_G_C2.072 Ncr_G_C2.072                                              31  1.3
NCR_G_C2.013 Ncr_G_C2.013                                              26  1.6
NCR_G_C2.418 Ncr_G_C2.418                                              31  1.8
NCR_G_C2.098 Ncr_G_C2.098                                              31  1.8
NCR_G_C2.615 Ncr_G_C2.615                                              30  2.5
NCR_G_C2.356 Ncr_G_C2.356                                              30  2.5
NCR_G_C2.569 Ncr_G_C2.569                                              30  2.5
NCR_G_C2.160 Ncr_G_C2.160                                              30  2.5
NCR_G_C2.441 Ncr_G_C2.441                                              30  3.4
NCR_G_C2.574 Ncr_G_C2.574                                              30  3.4
NCR_G_C2.775 Ncr_G_C2.775                                              30  3.4
NCR_G_C2.084 Ncr_G_C2.084                                              29  4.7
NCR_G_C2.167 Ncr_G_C2.167                                              29  4.7
NCR_G_C2.158 Ncr_G_C2.158                                              29  4.7
NCR_G_C2.681 Ncr_G_C2.681                                              26  4.9
NCR_G_C2.116 Ncr_G_C2.116                                              25  5.2
NCR_G_C2.687 Ncr_G_C2.687                                              29  6.3
NCR_G_C2.521 Ncr_G_C2.521                                              29  6.5
NCR_G_C2.446 Ncr_G_C2.446                                              29  6.5
NCR_G_C2.073 Ncr_G_C2.073                                              29  6.5
NCR_G_C2.320 Ncr_G_C2.320                                              29  6.5
NCR_G_C2.045 Ncr_G_C2.045                                              27  8.6
NCR_G_C2.163 Ncr_G_C2.163                                              29  8.9
NCR_G_C2.465 Ncr_G_C2.465                                              29  8.9
NCR_G_C2.742 Ncr_G_C2.742                                              29  8.9
NCR_G_C2.645 Ncr_G_C2.645                                              29  8.9
NCR_G_C2.172 Ncr_G_C2.172                                              29  8.9
NCR_G_C2.122 Ncr_G_C2.122                                              29  8.9
NCR_G_C2.753 Ncr_G_C2.753                                              29  8.9
NCR_G_C2.633 Ncr_G_C2.633                                              29  8.9
NCR_G_C2.358 Ncr_G_C2.358                                              29  8.9
NCR_G_C2.203 Ncr_G_C2.203                                              29  8.9
NCR_G_C2.392 Ncr_G_C2.392                                              29  8.9
NCR_G_C2.204 Ncr_G_C2.204                                              29  8.9
NCR_G_C2.085 Ncr_G_C2.085                                              29  8.9

>NCR_G_C2.488 Ncr_G_C2.488
          Length = 91443

 Score = 27.2 bits (53), Expect(2) = 0.29
 Identities = 9/17 (52%), Positives = 12/17 (69%)
 Frame = +2 / -3

                              
Query: 524   HHRALPPQEARATEAGA 574
             HH  LPP  ARA++ G+
Sbjct: 24754 HHSQLPPHPARASQRGS 24704


 Score = 24.4 bits (47), Expect(2) = 0.29
 Identities = 10/22 (45%), Positives = 13/22 (58%)
 Frame = +1 / -3

                                   
Query: 343   ASRSSTAPPRTRGAPARSHPRS 408
             + RSS  P R+RG+P     RS
Sbjct: 24940 SGRSSRLPHRSRGSPRSRRDRS 24875


>NCR_G_C2.187 Ncr_G_C2.187
          Length = 100470

 Score = 33.1 bits (66), Expect = 0.37
 Identities = 19/74 (25%), Positives = 26/74 (34%)
 Frame = -2 / -1

                                                                        
Query: 490  AHSGDAVDGVAMLSPATMPKVVPSETGTILDGSWPEHRAFEAALWSCATQSAPWRSAARG 311
            A + + V G A   P T P +  S         WP  R      W+   +  PW  +   
Sbjct: 4632 APTDEYVGGAARARPRTYPCMPQSAWRCPAPSRWPPGRGSRGPRWTKPARWRPWC*SG*A 4453

                          
Query: 310  TVKAPVXXRAPTAC 269
              +APV  R    C
Sbjct: 4452 RRRAPVQRRRAPGC 4411


>NCR_G_C2.899 Ncr_G_C2.899
          Length = 14320

 Score = 31.3 bits (62), Expect = 1.3
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = -2 / -3

                                                        
Query: 484  SGDAVDGVAMLSPATMPKVVPSETGTILDGSWPEHRAFEAALWS 353
            +G +  G++     T   + PSET     GSWP HR  +   WS
Sbjct: 8348 TGQSSGGLSFDDRCTWNCLAPSETFPADIGSWPWHRQCQKPDWS 8217


>NCR_G_C2.785 Ncr_G_C2.785
          Length = 68536

 Score = 31.3 bits (62), Expect = 1.3
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +1 / +1

                                      
Query: 334   VLTASRSSTAPPRTRGAPARSHPRS 408
             ++ +SR  TAPP T  AP+RS  RS
Sbjct: 51682 IIRSSRPITAPPTTSRAPSRSTARS 51756


>NCR_G_C2.072 Ncr_G_C2.072
          Length = 33319

 Score = 31.3 bits (62), Expect = 1.3
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +2 / -3

                                              
Query: 476   VTGVRVHDPVRANQKAHHRALPPQEARATEAGA 574
             VTG    D   AN+  HH  +PP   RA E+ A
Sbjct: 29606 VTGAH*PDHRSANENGHHHHVPPGRDRARESPA 29508


>NCR_G_C2.013 Ncr_G_C2.013
          Length = 121415

 Score = 26.3 bits (51), Expect(2) = 1.6
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -2 / -1

                               
Query: 298   PVXXRAPTACSHSRRGRS 245
             P   R+  ACS SRRGRS
Sbjct: 21179 PGARRSRGACSRSRRGRS 21126


 Score = 22.6 bits (43), Expect(2) = 1.6
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = -2 / -3

                        
Query: 331   WRSAARGTVKA 299
             W + ARG+++A
Sbjct: 21216 WTATARGSIRA 21184


>NCR_G_C2.418 Ncr_G_C2.418
          Length = 47903

 Score = 30.8 bits (61), Expect = 1.8
 Identities = 12/22 (54%), Positives = 13/22 (58%)
 Frame = +1 / -3

                                   
Query: 340   TASRSSTAPPRTRGAPARSHPR 405
             T S SS +PP T  AP  S PR
Sbjct: 12462 TPSASSVSPPSTSSAPPASFPR 12397


 Score = 29.0 bits (57), Expect = 6.5
 Identities = 12/28 (42%), Positives = 13/28 (45%)
 Frame = -2 / -1

                                         
Query: 412   GTILDGSWPEHRAFEAALWSCATQSAPW 329
             GT LD  WP   A  AA WS     + W
Sbjct: 24365 GTSLDRHWPSSLAEPAAPWSLTLADSWW 24282


>NCR_G_C2.098 Ncr_G_C2.098
          Length = 28828

 Score = 30.8 bits (61), Expect = 1.8
 Identities = 16/71 (22%), Positives = 29/71 (40%)
 Frame = -2 / +2

                                                                         
Query: 478   DAVDGVAMLSPATMPKVVPSETGTILDGSWPEHRAFEAALWSCATQSAPWRSAARGTVKA 299
             DA +  +  +   +P    S+  T+ DG++     F+AA +      +   S +  T   
Sbjct: 16244 DAANAGSHTTTVEVPTATYSQGATVTDGNYMPGGVFKAAKFGVPAAESAVNSISTTTEAL 16423

                        
Query: 298   PVXXRAPTACS 266
             P    APT  +
Sbjct: 16424 PTITEAPTVAA 16456


>NCR_G_C2.615 Ncr_G_C2.615
          Length = 130067

 Score = 30.4 bits (60), Expect = 2.5
 Identities = 20/78 (25%), Positives = 29/78 (36%)
 Frame = +3 / +3

                                                                         
Query: 267   EQAVGALXXTGAFTVPLAADLHGADCVAQLHSAASNARCSGQEPSKIVPVSEGTTFGIVA 446
             + A G+    G   V  A+D   A   +   SAAS      ++P+   P +         
Sbjct: 84267 DSAAGSAIPAGTAAVATASDGTTAGTASPATSAASTTSAIPEDPANATPAASTNASSTGP 84446

                               
Query: 447   GDSIATPSTASPECASMT 500
               S    STAS   A+ T
Sbjct: 84447 ESSAVPASTASAAAATPT 84500


>NCR_G_C2.356 Ncr_G_C2.356
          Length = 40340

 Score = 30.4 bits (60), Expect = 2.5
 Identities = 14/51 (27%), Positives = 22/51 (42%)
 Frame = +3 / -2

                                                                
Query: 357   HSAASNARCSGQEPSKIVPVSEGTTFGIVAGDSIATPSTASPECASMTLCG 509
             H  +S +  S   PS     S  T        S ++P++ SP C S++ C 
Sbjct: 31012 HRPSSASCPSKPAPSSSPSRSSSTASQASTASSPSSPASRSPSCKSVSTCS 30860


>NCR_G_C2.569 Ncr_G_C2.569
          Length = 192756

 Score = 30.4 bits (60), Expect = 2.5
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -3 / -1

                                 
Query: 594   PGEAGAWAPASVARASCGGS 535
             PG    W PA  A A CGGS
Sbjct: 43923 PGAGRRWPPADAAGACCGGS 43864


 Score = 28.6 bits (56), Expect = 8.9
 Identities = 10/19 (52%), Positives = 12/19 (62%)
 Frame = +2 / +2

                                
Query: 536   LPPQEARATEAGAQAPASP 592
             LPPQ+A A  AG Q   +P
Sbjct: 43865 LPPQQAPAASAGGQRRPAP 43921


>NCR_G_C2.160 Ncr_G_C2.160
          Length = 71170

 Score = 30.4 bits (60), Expect = 2.5
 Identities = 12/36 (33%), Positives = 17/36 (46%)
 Frame = +3 / -2

                                                
Query: 321  ADLHGADCVAQLHSAASNARCSGQEPSKIVPVSEGT 428
            A  HG+ CV  LH+A    RC G    +   +  G+
Sbjct: 2862 AKSHGSKCVNHLHAAKHAPRCKGHHTPRHPKIGGGS 2755


>NCR_G_C2.441 Ncr_G_C2.441
          Length = 223615

 Score = 29.9 bits (59), Expect = 3.4
 Identities = 14/37 (37%), Positives = 16/37 (42%)
 Frame = -2 / -2

                                                  
Query: 352   CATQSAPWRSAARGTVKAPVXXRAPTACSHSRRGRSC 242
             C  Q+A WR  AR  V + V     T       GRSC
Sbjct: 22134 CIAQAASWRRFARSGVVSLVASACLTRAQSRGLGRSC 22024


>NCR_G_C2.574 Ncr_G_C2.574
          Length = 180542

 Score = 29.9 bits (59), Expect = 3.4
 Identities = 12/29 (41%), Positives = 16/29 (54%)
 Frame = -2 / -1

                                           
Query: 325    SAARGTVKAPVXXRAPTACSHSRRGRSCT 239
              S  R +   P+  RAPT C  +R GR+ T
Sbjct: 149564 SIPRNSSTRPLTTRAPTCCRPTRCGRTAT 149478


>NCR_G_C2.775 Ncr_G_C2.775
          Length = 60236

 Score = 29.9 bits (59), Expect = 3.4
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +1 / -3

                                  
Query: 340   TASRSSTAPPRTRGAPARSHP 402
             TAS     PPRTR +P R HP
Sbjct: 26634 TASPPPPPPPRTRTSPPRLHP 26572


>NCR_G_C2.084 Ncr_G_C2.084
          Length = 110311

 Score = 29.5 bits (58), Expect = 4.7
 Identities = 16/54 (29%), Positives = 23/54 (41%)
 Frame = -2 / -3

                                                                  
Query: 493  DAHSGDAVDGVAMLSPATMPKVVPSETGTILDGSWPEHRAFEAALWSCATQSAP 332
            D  S  A +G   +SP     +  S++  +L   W   RAF A  W  +  S P
Sbjct: 6578 DNVSNAATEGSMKISPTVESPLCCSKSVEVLGAWWFSSRAFAALAWVPSAFSRP 6417


>NCR_G_C2.167 Ncr_G_C2.167
          Length = 30999

 Score = 29.5 bits (58), Expect = 4.7
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1 / -3

                                  
Query: 340  TASRSSTAPPRTRGAPARSHPR 405
            +A R   APPR RG P+   PR
Sbjct: 1387 SAGRGPEAPPRCRGTPSHRPPR 1322


>NCR_G_C2.158 Ncr_G_C2.158
          Length = 84559

 Score = 29.5 bits (58), Expect = 4.7
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +1 / -2

                                 
Query: 346   SRSSTAPPRTRGAPARSHPR 405
             SRSST PPR   AP+   PR
Sbjct: 70233 SRSSTPPPRRSSAPSTRPPR 70174


>NCR_G_C2.681 Ncr_G_C2.681
          Length = 124507

 Score = 25.8 bits (50), Expect(2) = 4.9
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3 / -2

                          
Query: 687    PLVTPIYHHPSQ 722
              P+  P+YHHP+Q
Sbjct: 114231 PVPPPLYHHPNQ 114196


 Score = 21.2 bits (40), Expect(2) = 4.9
 Identities = 5/13 (38%), Positives = 8/13 (61%)
 Frame = +2 / -2

                           
Query: 851    YHHSKLDHNEPPL 889
              +HH    H +PP+
Sbjct: 114195 HHHQHHQHQQPPM 114157


>NCR_G_C2.116 Ncr_G_C2.116
          Length = 72284

 Score = 25.3 bits (49), Expect(2) = 5.2
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3 / -3

                            
Query: 459   ATPSTASPECASMTL 503
             +T ST+   CASM+L
Sbjct: 68289 STSSTSPTRCASMSL 68245


 Score = 21.7 bits (41), Expect(2) = 5.2
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +1 / -3

                                
Query: 349   RSSTAPPRTRGAPARSHPR 405
             R ++ PP T  + + S PR
Sbjct: 68451 RRTSPPPTTSSSTSSSSPR 68395


>NCR_G_C2.687 Ncr_G_C2.687
          Length = 148317

 Score = 28.6 bits (56), Expect(2) = 6.3
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -2 / -1

                                       
Query: 391  WPEHRAFEAALWSCATQSAPWRSAARG 311
            WPE R +  + W C  +S P R    G
Sbjct: 5202 WPELRTYACSGWPCRGRSGPGRRWTTG 5122


 Score = 18.0 bits (33), Expect(2) = 6.3
 Identities = 5/5 (100%), Positives = 5/5 (100%)
 Frame = -2 / -1

                 
Query: 265  HSRRG 251
            HSRRG
Sbjct: 5016 HSRRG 5002


>NCR_G_C2.521 Ncr_G_C2.521
          Length = 150662

 Score = 29.0 bits (57), Expect = 6.5
 Identities = 8/23 (34%), Positives = 12/23 (51%)
 Frame = +3 / +3

                                    
Query: 762   TLVFYHSKLDYNDPRCCAHPFIW 830
             +L F+H    +  P  C+H F W
Sbjct: 34221 SLHFHHGSFTFGSPSSCSHLFFW 34289


>NCR_G_C2.446 Ncr_G_C2.446
          Length = 145200

 Score = 29.0 bits (57), Expect = 6.5
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2 / +3

                                      
Query: 521   AHHRALPPQEARATEAGAQAPASPG 595
             A HR  PP+++   +AG Q P   G
Sbjct: 40425 ARHRPAPPRDSSRQQAGGQRPTRTG 40499


>NCR_G_C2.073 Ncr_G_C2.073
          Length = 94453

 Score = 29.0 bits (57), Expect = 6.5
 Identities = 11/23 (47%), Positives = 12/23 (51%)
 Frame = -2 / +3

                                    
Query: 730   LHCCDGWW*IGVTSGVRGIHRRR 662
             L C   WW* G  S  R +HR R
Sbjct: 60321 LKCAMRWW*SGELSPERAVHRER 60389


>NCR_G_C2.320 Ncr_G_C2.320
          Length = 80443

 Score = 29.0 bits (57), Expect = 6.5
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +1 / +3

                                     
Query: 337   LTASRSSTAPPRTRGAPARSHPRS 408
             L +S S  +PPR  GAP  S PR+
Sbjct: 49035 LRSSNSRRSPPRPSGAPEPSPPRT 49106


>NCR_G_C2.045 Ncr_G_C2.045
          Length = 107702

 Score = 26.7 bits (52), Expect(2) = 8.6
 Identities = 10/19 (52%), Positives = 13/19 (67%)
 Frame = +2 / -1

                                
Query: 488   RVHDPVRANQKAHHRALPP 544
             +VH P+R+ QK    ALPP
Sbjct: 12731 QVHIPLRSLQKPQRHALPP 12675


 Score = 19.4 bits (36), Expect(2) = 8.6
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1 / -3

                                
Query: 334   VLTASRSSTAPPRTRGAPA 390
             VLT + S+  PP T   P+
Sbjct: 12771 VLTNTTSTAPPPSTSTYPS 12715


>NCR_G_C2.163 Ncr_G_C2.163
          Length = 52618

 Score = 28.6 bits (56), Expect = 8.9
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -2 / +3

                       
Query: 721   CDGWW*IGVT 692
             CDGWW +GVT
Sbjct: 40584 CDGWWSLGVT 40613


>NCR_G_C2.465 Ncr_G_C2.465
          Length = 18593

 Score = 28.6 bits (56), Expect = 8.9
 Identities = 10/28 (35%), Positives = 14/28 (49%)
 Frame = -2 / +2

                                         
Query: 361   LWSCATQSAPWRSAARGTVKAPVXXRAP 278
             LW C+ Q+ PW   A G+    +   AP
Sbjct: 13550 LWRCSVQADPWTVQATGSHPGMILAIAP 13633


>NCR_G_C2.742 Ncr_G_C2.742
          Length = 80993

 Score = 28.6 bits (56), Expect = 8.9
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3 / +2

                                       
Query: 282   ALXXTGAFTVPLAADLHGADCVAQLH 359
             A+   G+  VPL   +HG DC++  H
Sbjct: 30278 AVLLCGSVKVPLGRGIHGRDCMSYHH 30355


>NCR_G_C2.645 Ncr_G_C2.645
          Length = 53172

 Score = 28.6 bits (56), Expect = 8.9
 Identities = 11/36 (30%), Positives = 15/36 (41%)
 Frame = -2 / -2

                                                 
Query: 439   MPKVVPSETGTILDGSWPEHRAFEAALWSCATQSAP 332
             MP++V    GT   GS P  + +    W C     P
Sbjct: 29195 MPQMVVGSRGTDSTGSSPAIKCYATESWDCCLAKVP 29088


>NCR_G_C2.172 Ncr_G_C2.172
          Length = 97267

 Score = 28.6 bits (56), Expect = 8.9
 Identities = 10/23 (43%), Positives = 15/23 (64%)
 Frame = +1 / -1

                                    
Query: 340   TASRSSTAPPRTRGAPARSHPRS 408
             +A  ++T PPRTR  P++  P S
Sbjct: 73471 SADSNTTTPPRTRNPPSKQPPPS 73403


>NCR_G_C2.122 Ncr_G_C2.122
          Length = 63268

 Score = 28.6 bits (56), Expect = 8.9
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +3 / +3

                                             
Query: 738  AIYICAPVTLVFYHSKLDYNDPRCCAHPFIWXR 836
            A  IC+   +V  +SK   + P C A P+ W R
Sbjct: 1917 AAMICSKQPVVLIYSKPVCSAPSCAAPPWSWRR 2015


>NCR_G_C2.753 Ncr_G_C2.753
          Length = 34058

 Score = 28.6 bits (56), Expect = 8.9
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3 / +3

                                 
Query: 594  PGEAGAWAPASVARASCGGSA 532
            P  +G W P++  R SC GS+
Sbjct: 5499 PPASGLWIPSTARRRSCAGSS 5561


>NCR_G_C2.633 Ncr_G_C2.633
          Length = 56076

 Score = 28.6 bits (56), Expect = 8.9
 Identities = 13/31 (41%), Positives = 17/31 (53%)
 Frame = +2 / -3

                                            
Query: 482   GVRVHDPVRANQKAHHRALPPQEARATEAGA 574
             GVR HDP R +++      PPQ+    EA A
Sbjct: 51274 GVRFHDP*RCSRQEALPEPPPQQKEKLEAQA 51182


>NCR_G_C2.358 Ncr_G_C2.358
          Length = 98362

 Score = 28.6 bits (56), Expect = 8.9
 Identities = 10/24 (41%), Positives = 14/24 (57%)
 Frame = -2 / +1

                                     
Query: 742   IAASLHCCDGWW*IGVTSGVRGIH 671
             +A SL C  G+W +G   G R +H
Sbjct: 16846 VARSLSCNRGFWSVGRLHGQRCLH 16917


>NCR_G_C2.203 Ncr_G_C2.203
          Length = 128723

 Score = 28.6 bits (56), Expect = 8.9
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -2 / -2

                                            
Query: 475   AVDGVAMLSPATMPKVVPSETGTILDGSWPE 383
             + +G A + PAT  +  P  T    +GSWPE
Sbjct: 24070 SAEGEAKMVPATQAERRPRPTMLEKEGSWPE 23978


>NCR_G_C2.392 Ncr_G_C2.392
          Length = 22419

 Score = 28.6 bits (56), Expect = 8.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2 / -2

                                
Query: 482  GVRVHDPVRANQKAHHRALP 541
            G R+H P RA ++A+H   P
Sbjct: 7673 GHRIHTPARAEEQANHHGAP 7614


>NCR_G_C2.204 Ncr_G_C2.204
          Length = 73435

 Score = 28.6 bits (56), Expect = 8.9
 Identities = 10/13 (76%), Positives = 11/13 (83%)
 Frame = +2 / -1

                          
Query: 509   ANQKAHHRALPPQ 547
             A Q+AHHR LPPQ
Sbjct: 55705 APQRAHHRLLPPQ 55667


>NCR_G_C2.085 Ncr_G_C2.085
          Length = 47946

 Score = 28.6 bits (56), Expect = 8.9
 Identities = 11/17 (64%), Positives = 13/17 (75%)
 Frame = +1 / -3

                              
Query: 352   SSTAPPRTRGAPARSHP 402
             SST+PP  R +PARS P
Sbjct: 20431 SSTSPPTPRPSPARSSP 20381


  Database: /phillip/Ncr/Ncr_G
    Posted date:  Jan 24, 2002  1:55 PM
  Number of letters in database: 37,969,317
  Number of sequences in database:  995
  
Lambda     K      H
   0.318    0.135    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 59582293
Number of Sequences: 995
Number of extensions: 673419
Number of successful extensions: 47721
Number of sequences better than 10.0: 39
length of query: 298
length of database: 12,656,439
effective HSP length: 47
effective length of query: 251
effective length of database: 12,609,674
effective search space: 3165028174
effective search space used: 3165028174
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 56 (28.6 bits)