TBLASTX 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCPvsNca/blast/1605_B11_C21ZS5.seq
         (882 letters)

Database: /phillip/Ncr/Ncr_G
           995 sequences; 37,969,317 total letters

Searching....................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

NCR_G_C2.145 Ncr_G_C2.145                                              33  0.37
NCR_G_C2.045 Ncr_G_C2.045                                              33  0.50
NCR_G_C2.127 Ncr_G_C2.127                                              31  0.98
NCR_G_C2.802 Ncr_G_C2.802                                              29  1.3
NCR_G_C2.588 Ncr_G_C2.588                                              30  2.5
NCR_G_C2.615 Ncr_G_C2.615                                              30  2.5
NCR_G_C2.106 Ncr_G_C2.106                                              30  3.4
NCR_G_C2.753 Ncr_G_C2.753                                              30  3.4
NCR_G_C2.088 Ncr_G_C2.088                                              30  3.4
NCR_G_C2.311 Ncr_G_C2.311                                              30  3.4
NCR_G_C2.205 Ncr_G_C2.205                                              29  4.6
NCR_G_C2.357 Ncr_G_C2.357                                              29  4.6
NCR_G_C2.275 Ncr_G_C2.275                                              29  4.6
NCR_G_C2.230 Ncr_G_C2.230                                              24  5.8
NCR_G_C2.416 Ncr_G_C2.416                                              29  6.4
NCR_G_C2.105 Ncr_G_C2.105                                              29  6.4
NCR_G_C2.064 Ncr_G_C2.064                                              29  6.4
NCR_G_C2.042_4 Ncr_G_C2.042_4.seq Continuation (4 of 6) of Ncr_G...    29  6.4
NCR_G_C2.042_3 Ncr_G_C2.042_3.seq Continuation (3 of 6) of Ncr_G...    29  6.4
NCR_G_C2.681 Ncr_G_C2.681                                              29  6.4
NCR_G_C2.508 Ncr_G_C2.508                                              29  6.4
NCR_G_C2.236 Ncr_G_C2.236                                              29  6.4
NCR_G_C2.146 Ncr_G_C2.146                                              29  6.4
NCR_G_C2.430 Ncr_G_C2.430                                              29  8.7
NCR_G_C2.404 Ncr_G_C2.404                                              29  8.7
NCR_G_C2.380 Ncr_G_C2.380                                              29  8.7
NCR_G_C2.260 Ncr_G_C2.260                                              29  8.7
NCR_G_C2.565 Ncr_G_C2.565                                              29  8.7

>NCR_G_C2.145 Ncr_G_C2.145
          Length = 35249

 Score = 33.1 bits (66), Expect = 0.37
 Identities = 16/40 (40%), Positives = 19/40 (47%)
 Frame = -2 / -2

                                                     
Query: 122   RSQYKSVSSGCFGNGRDISICSDAWVDPGXPDRNLQAYQL 3
             R   KSV  GC+ +GR  S+     V P  P R L A  L
Sbjct: 23641 RCHRKSVPDGCWPSGRSFSVADKIVVHPDLPRRTLFAGHL 23522


>NCR_G_C2.045 Ncr_G_C2.045
          Length = 107702

 Score = 32.7 bits (65), Expect = 0.50
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +2 / -1

                                           
Query: 401   VNLLSTCIHYLYASLRYLSTLPQSLFGSIR 490
             V+ L+T +HYL    R   T+P S+ GS+R
Sbjct: 50864 VSGLTTNVHYLLLQARTSKTIPSSVLGSVR 50775


>NCR_G_C2.127 Ncr_G_C2.127
          Length = 41672

 Score = 31.3 bits (62), Expect(2) = 0.98
 Identities = 12/38 (31%), Positives = 21/38 (54%)
 Frame = +2 / -1

                                                   
Query: 5     AGTPAGSGPXFPGRPTRPNRSKYLDHFQNNLKKPTCTA 118
             AG P+G+    P  PT P R++  +  ++   +P+C A
Sbjct: 11291 AGCPSGTSHTRPSTPTPPRRTRRSEAPRSRQTRPSCFA 11178


 Score = 18.5 bits (34), Expect(2) = 0.98
 Identities = 10/26 (38%), Positives = 13/26 (49%)
 Frame = +2 / -3

                                       
Query: 212   IDASPSCDYTKSFSRDRSSRIAGHVS 289
             I  SPS D+T   +  +   I  HVS
Sbjct: 11076 ISYSPSSDWTSLSTSTKDWLI*CHVS 10999


>NCR_G_C2.802 Ncr_G_C2.802
          Length = 37743

 Score = 28.6 bits (56), Expect(2) = 1.3
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1 / +3

                                        
Query: 40   GSTHASEQIEISRPFPKQPEETDLYCDL 123
            G  H S + E+  P+P+ P  T ++C +
Sbjct: 8016 GLLHFSFRREVGAPYPRHPARTVVFCSV 8099


 Score = 20.8 bits (39), Expect(2) = 1.3
 Identities = 9/17 (52%), Positives = 11/17 (63%)
 Frame = +3 / +1

                             
Query: 123  VSCSQQSRHAMLYRCFT 173
            +SCS QSR A L   F+
Sbjct: 8080 LSCSVQSRSAFLITKFS 8130


>NCR_G_C2.588 Ncr_G_C2.588
          Length = 154785

 Score = 30.4 bits (60), Expect = 2.5
 Identities = 15/41 (36%), Positives = 19/41 (45%)
 Frame = +1 / -1

                                                       
Query: 112    YCDLLAALNNRGMLCCTGVSRKFSSSLLATHGADRCISVVR 234
              Y  LL    NRG+   T   R+    LL THG D+    +R
Sbjct: 125874 YASLLFLSTNRGLCVVTEDQREALLDLLLTHGHDKISPEIR 125752


>NCR_G_C2.615 Ncr_G_C2.615
          Length = 130067

 Score = 30.4 bits (60), Expect = 2.5
 Identities = 11/29 (37%), Positives = 16/29 (54%)
 Frame = -1 / +3

                                          
Query: 99    FRLFWKWSRYFDLFGRVGRPGNXGPEPAG 13
             FR  W W R+  ++      G+ GPEP+G
Sbjct: 31680 FRWPWSWGRHVSVWRWRRSRGDMGPEPSG 31766


>NCR_G_C2.106 Ncr_G_C2.106
          Length = 177512

 Score = 29.9 bits (59), Expect = 3.4
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2 / -1

                                       
Query: 242    WYNRTTEMHLSAPCVASKLELNFRE 168
              +YN + E H + PCVA    L+FR+
Sbjct: 137795 YYNMSREPHKAGPCVAGLC*LSFRQ 137721


>NCR_G_C2.753 Ncr_G_C2.753
          Length = 34058

 Score = 29.9 bits (59), Expect = 3.4
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2 / -1

                                               
Query: 92    NLKKPTCTAIC*LLSTIEACYVVPVFHGSSARVC 193
             NL+K +C+  C    T  A    P+F  SS+ +C
Sbjct: 31496 NLEKFSCSYFCTSEMTYSAMRSSPIFRASSSSMC 31395


>NCR_G_C2.088 Ncr_G_C2.088
          Length = 45573

 Score = 29.9 bits (59), Expect = 3.4
 Identities = 14/65 (21%), Positives = 29/65 (44%)
 Frame = +2 / +2

                                                                         
Query: 98    KKPTCTAIC*LLSTIEACYVVPVFHGSSARVCLRHMERIDASPSCDYTKSFSRDRSSRIA 277
             K   C    *L  +I+  +    FH    ++C++  + + +S  C    S  R R+  ++
Sbjct: 43181 KLALCIVAT*LAHSIDGSHDKDAFHQPEWQICVKETDMVGSSL*CKPDTSRLRARNWAVS 43360

                  
Query: 278   GHVSV 292
             G + +
Sbjct: 43361 GQIKI 43375


>NCR_G_C2.311 Ncr_G_C2.311
          Length = 51601

 Score = 29.9 bits (59), Expect = 3.4
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2 / -3

                                      
Query: 125   NRSQYKSVSSGCFGNGRDISICSDA 51
             N S Y     GC+G+   I++C DA
Sbjct: 43526 NNSNYYQPHRGCYGDACSIAVCRDA 43452


>NCR_G_C2.205 Ncr_G_C2.205
          Length = 197179

 Score = 29.5 bits (58), Expect = 4.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2 / +3

                              
Query: 857  AYPPHHWFWSGLNESTEP 804
            A+P HHWF++  N  T P
Sbjct: 3972 AFPHHHWFFTMYNTDTGP 4025


>NCR_G_C2.357 Ncr_G_C2.357
          Length = 48218

 Score = 29.5 bits (58), Expect = 4.6
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -2 / +2

                                             
Query: 257   LERRTWYNRTTEMHLSAPCVASKLELNFRETP 162
             L+RRTW           PC+ S   L+FR  P
Sbjct: 44771 LQRRTWMRTALRNRRWVPCLLSGFLLSFRRWP 44866


>NCR_G_C2.275 Ncr_G_C2.275
          Length = 20683

 Score = 29.5 bits (58), Expect = 4.6
 Identities = 11/36 (30%), Positives = 21/36 (57%)
 Frame = +2 / -1

                                                
Query: 359  LRLQSTSYVERETPVNLLSTCIHYLYASLRYLSTLP 466
            LRL STS++     + L  +C++  Y ++  ++ LP
Sbjct: 3769 LRLNSTSFIANRLSILLALSCLNSTYLTVSNIAQLP 3662


>NCR_G_C2.230 Ncr_G_C2.230
          Length = 223934

 Score = 24.4 bits (47), Expect(2) = 5.8
 Identities = 11/21 (52%), Positives = 12/21 (56%)
 Frame = +1 / -1

                                   
Query: 124    LAALNNRGMLCCTGVSRKFSS 186
              LAA   RG LC TG S   +S
Sbjct: 120281 LAARRGRGFLCLTGRSSSSTS 120219


 Score = 22.1 bits (42), Expect(2) = 5.8
 Identities = 7/22 (31%), Positives = 10/22 (44%)
 Frame = +2 / -1

                                    
Query: 8      GTPAGSGPXFPGRPTRPNRSKY 73
              G P  + P F G    P R+ +
Sbjct: 120413 GVPPAAAPAFSGEALAPARASF 120348


>NCR_G_C2.416 Ncr_G_C2.416
          Length = 188447

 Score = 29.0 bits (57), Expect = 6.4
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +2 / +2

                                              
Query: 617    HSSSIVSPXITFNHPDGKWTRPYRPLHLRWGG 712
              H+  I+ P +    P  +W R   P  LRW G
Sbjct: 122210 HTLHILKPRLGKPAPPARWPRQGHPCGLRWQG 122305


>NCR_G_C2.105 Ncr_G_C2.105
          Length = 33954

 Score = 29.0 bits (57), Expect = 6.4
 Identities = 11/34 (32%), Positives = 16/34 (46%)
 Frame = -2 / +2

                                              
Query: 245  TWYNRTTEMHLSAPCVASKLELNFRETPVQHSMP 144
            TW N T  +HL+ P    +   +FR T  +   P
Sbjct: 1922 TWINYTRNLHLAKPIANLRSRPSFRSTRARSDRP 2023


>NCR_G_C2.064 Ncr_G_C2.064
          Length = 47747

 Score = 29.0 bits (57), Expect = 6.4
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -2 / -2

                                         
Query: 176   FRETPVQHSMPRLLRAANRSQYKSVSSG 93
             FR  P+QH+MP LL    +S+ +  + G
Sbjct: 44722 FRHQPIQHTMPFLLCCHRKSKIRVFTHG 44639


>NCR_G_C2.042_4 Ncr_G_C2.042_4.seq Continuation (4 of 6) of
            Ncr_G_C2.042 from base 300001
          Length = 110000

 Score = 29.0 bits (57), Expect = 6.4
 Identities = 12/34 (35%), Positives = 16/34 (46%)
 Frame = +2 / -1

                                              
Query: 569  GGRSRGSKLTYACMRRHSSSIVSPXITFNHPDGK 670
            GG S   K++Y C RR+    +       HPD K
Sbjct: 6581 GGCSENRKISYPCRRRYHGGRIEGGWVC*HPDEK 6480


>NCR_G_C2.042_3 Ncr_G_C2.042_3.seq Continuation (3 of 6) of Ncr_G_C2.042
              from base 200001
          Length = 110000

 Score = 29.0 bits (57), Expect = 6.4
 Identities = 12/34 (35%), Positives = 16/34 (46%)
 Frame = +2 / -3

                                                
Query: 569    GGRSRGSKLTYACMRRHSSSIVSPXITFNHPDGK 670
              GG S   K++Y C RR+    +       HPD K
Sbjct: 106581 GGCSENRKISYPCRRRYHGGRIEGGWVC*HPDEK 106480


>NCR_G_C2.681 Ncr_G_C2.681
          Length = 124507

 Score = 29.0 bits (57), Expect = 6.4
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -3 / -3

                                            
Query: 352   VKTVIQVSRPYSCLSTLLSKD*NMTRNSR*P 260
             VKT++Q+S P+S L T  SK   +T   R P
Sbjct: 32708 VKTLLQISAPFSSLVTRRSKTQRVTVPQRPP 32616


>NCR_G_C2.508 Ncr_G_C2.508
          Length = 105197

 Score = 29.0 bits (57), Expect = 6.4
 Identities = 12/38 (31%), Positives = 19/38 (49%)
 Frame = -2 / +3

                                                   
Query: 137   LRAANRSQYKSVSSGCFGNGRDISICSDAWVDPGXPDR 24
             LRA     +K     CF +G++  + +D+  DP   DR
Sbjct: 44166 LRAVVPGIHKIWEKVCFQSGKECELLADSGEDPASSDR 44279


>NCR_G_C2.236 Ncr_G_C2.236
          Length = 344103

 Score = 29.0 bits (57), Expect = 6.4
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +2 / +1

                                        
Query: 176   SSARVCLRHMERIDASPSCDYTKSFSR 256
             SSARV   + +  DA  SCDY   + R
Sbjct: 69397 SSARVFAFYQDHRDAGDSCDYGNQYKR 69477


>NCR_G_C2.146 Ncr_G_C2.146
          Length = 38737

 Score = 29.0 bits (57), Expect = 6.4
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +2 / +2

                                    
Query: 410   LSTCIHYLYASLRYLSTLPQSLF 478
             LS+   YLY  LRY   LP S+F
Sbjct: 14408 LSSPSRYLYLPLRYFMPLPSSIF 14476


>NCR_G_C2.430 Ncr_G_C2.430
          Length = 226714

 Score = 28.6 bits (56), Expect = 8.7
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -1 / +3

                                           
Query: 738   SENERSVXIPPHLRCNGR*GRVHLPSGWLK 649
             ++    +  PP ++C  R   +HLP  WL+
Sbjct: 15429 AQERSCIGSPPQVKC*ERNANIHLPR*WLR 15518


>NCR_G_C2.404 Ncr_G_C2.404
          Length = 264766

 Score = 28.6 bits (56), Expect = 8.7
 Identities = 13/36 (36%), Positives = 18/36 (49%)
 Frame = -2 / +3

                                                  
Query: 206    PCVASKLELNFRETPVQHSMPRLLRAANRSQYKSVS 99
              PC  S    +F E  VQHS+P L+     S +  +S
Sbjct: 160344 PCRPSFSAKSFTECDVQHSVPSLIATMRPSSFAILS 160451


>NCR_G_C2.380 Ncr_G_C2.380
          Length = 179343

 Score = 28.6 bits (56), Expect = 8.7
 Identities = 11/29 (37%), Positives = 16/29 (54%)
 Frame = +1 / +2

                                          
Query: 400   SQSSIYLHTLPICLSKVPIDIAPKPIWID 486
             +  S  L  L  CLSK+ + ++PK  W D
Sbjct: 68159 ADESARLEFLAACLSKMGLSLSPKAAWDD 68245


>NCR_G_C2.260 Ncr_G_C2.260
          Length = 61881

 Score = 28.6 bits (56), Expect = 8.7
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +1 / +3

                                          
Query: 145   GMLCCTGVSRKFSSSLLATHGADRCISVV 231
             G+ CC  +S + +  L  THG+   +S+V
Sbjct: 25845 GITCCWSLSSQSAQLLFQTHGSINSLSIV 25931


>NCR_G_C2.565 Ncr_G_C2.565
          Length = 82225

 Score = 28.6 bits (56), Expect = 8.7
 Identities = 14/38 (36%), Positives = 16/38 (41%)
 Frame = +2 / -2

                                                   
Query: 5     AGTPAGSGPXFPGRPTRPNRSKYLDHFQNNLKKPTCTA 118
             A T  G GP  P   TRP+R          L+KP   A
Sbjct: 77334 AETMLGKGPRVPKNATRPSRVSVSSPRPQELRKPAVHA 77221


  Database: /phillip/Ncr/Ncr_G
    Posted date:  Jan 24, 2002  1:55 PM
  Number of letters in database: 37,969,317
  Number of sequences in database:  995
  
Lambda     K      H
   0.318    0.135    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 79353175
Number of Sequences: 995
Number of extensions: 1155309
Number of successful extensions: 57502
Number of sequences better than 10.0: 28
length of query: 294
length of database: 12,656,439
effective HSP length: 47
effective length of query: 246
effective length of database: 12,609,674
effective search space: 3101979804
effective search space used: 3101979804
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 56 (28.6 bits)