TBLASTX 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCPvsNca/blast/2553_F05_L09ZT5.seq
         (989 letters)

Database: /phillip/Ncr/Ncr_G
           995 sequences; 37,969,317 total letters

Searching....................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

NCR_G_C2.017 Ncr_G_C2.017                                              35  0.086
NCR_G_C2.253 Ncr_G_C2.253                                              34  0.22
NCR_G_C2.752 Ncr_G_C2.752                                              33  0.58
NCR_G_C2.220 Ncr_G_C2.220                                              33  0.58
NCR_G_C2.523 Ncr_G_C2.523                                              32  0.79
NCR_G_C2.066 Ncr_G_C2.066                                              32  0.79
NCR_G_C2.667 Ncr_G_C2.667                                              30  0.84
NCR_G_C2.256 Ncr_G_C2.256                                              32  1.1
NCR_G_C2.393 Ncr_G_C2.393                                              31  1.5
NCR_G_C2.116 Ncr_G_C2.116                                              31  1.5
NCR_G_C2.059 Ncr_G_C2.059                                              26  1.8
NCR_G_C2.042_5 Ncr_G_C2.042_5.seq Continuation (5 of 6) of Ncr_G...    31  2.0
NCR_G_C2.379 Ncr_G_C2.379                                              31  2.0
NCR_G_C2.042_6 Ncr_G_C2.042_6.seq Continuation (6 of 6) of Ncr_G...    31  2.0
NCR_G_C2.202 Ncr_G_C2.202                                              30  2.8
NCR_G_C2.085 Ncr_G_C2.085                                              30  2.8
NCR_G_C2.342 Ncr_G_C2.342                                              30  2.8
NCR_G_C2.452 Ncr_G_C2.452                                              25  3.1
NCR_G_C2.718 Ncr_G_C2.718                                              26  3.4
NCR_G_C2.736 Ncr_G_C2.736                                              30  3.9
NCR_G_C2.635 Ncr_G_C2.635                                              30  3.9
NCR_G_C2.219 Ncr_G_C2.219                                              30  3.9
NCR_G_C2.713 Ncr_G_C2.713                                              30  3.9
NCR_G_C2.712 Ncr_G_C2.712                                              29  5.3
NCR_G_C2.438 Ncr_G_C2.438                                              29  5.3
NCR_G_C2.677 Ncr_G_C2.677                                              26  5.7
NCR_G_C2.111 Ncr_G_C2.111                                              29  7.3
NCR_G_C2.775 Ncr_G_C2.775                                              29  7.3
NCR_G_C2.441 Ncr_G_C2.441                                              29  7.3
NCR_G_C2.746 Ncr_G_C2.746                                              29  7.3
NCR_G_C2.308 Ncr_G_C2.308                                              29  7.3
NCR_G_C2.577 Ncr_G_C2.577                                              29  7.3
NCR_G_C2.544 Ncr_G_C2.544                                              22  9.3

>NCR_G_C2.017 Ncr_G_C2.017
          Length = 86020

 Score = 35.4 bits (71), Expect = 0.086
 Identities = 16/59 (27%), Positives = 27/59 (45%)
 Frame = -1 / -3

                                                                        
Query: 551   HISTEDQNTISYLNNTHTTPLLDINAKIHNNHPHIPLYLVKPLRRGQEHSHREFPKTIG 375
             HI+   +  + YL    T PL  +  ++     H    L + +R   +H HR+ P+T G
Sbjct: 42845 HINLPTKRQVLYLPTLTTAPLPQLKQELRPRRNHRRPTLSREVRVSPQHLHRQHPQTKG 42669


>NCR_G_C2.253 Ncr_G_C2.253
          Length = 110253

 Score = 34.1 bits (68), Expect = 0.22
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -1 / -2

                                      
Query: 458   HPHIPLYLVKPLRRGQEHSHREFPK 384
             HP IP+ +VKP+     H+HR  PK
Sbjct: 59024 HPRIPIVVVKPIAECGIHNHRSRPK 58950


>NCR_G_C2.752 Ncr_G_C2.752
          Length = 67398

 Score = 32.7 bits (65), Expect = 0.58
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = -3 / +1

                                      
Query: 576   FHMKPTTRAYLHRRSKYNIISKQHP 502
             F+ KPT R +LH+R  ++ IS Q P
Sbjct: 54337 FNPKPTVRVFLHKRHTHHRISLQEP 54411


>NCR_G_C2.220 Ncr_G_C2.220
          Length = 142147

 Score = 32.7 bits (65), Expect = 0.58
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -1 / -2

                                            
Query: 494    PLLDINAKIHNNHPHIPLYLVKPLRRGQEH 405
              PL D+ A  H++ PH+ L  ++P  RGQ +
Sbjct: 126696 PLADVYASHHHHLPHLRLLQIRPHPRGQPY 126607


>NCR_G_C2.523 Ncr_G_C2.523
          Length = 130581

 Score = 32.2 bits (64), Expect = 0.79
 Identities = 18/52 (34%), Positives = 24/52 (45%)
 Frame = -1 / +2

                                                                 
Query: 467   HNNHPHIPLYLVKPLRRGQEHSHREFPKTIGSHGLTSTSRI*HQRS*HKGFA 312
             H++H H PL L  PLR   +  H   P         S+S   HQ S H+ F+
Sbjct: 58619 HHHHLHHPLPLPLPLRHPLQPIHDPHPLPPPPQD*ESSSSSQHQPSSHRAFS 58774


>NCR_G_C2.066 Ncr_G_C2.066
          Length = 117949

 Score = 32.2 bits (64), Expect = 0.79
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -1 / +1

                                      
Query: 512    NNTHTTPLLDINAKIHNNHPHIPL 441
              +NTH T  L I A+ HN H H  L
Sbjct: 111367 HNTHNTSYLSIQAQAHNTHHHSTL 111438


>NCR_G_C2.667 Ncr_G_C2.667
          Length = 35070

 Score = 29.9 bits (59), Expect(2) = 0.84
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -2 / +3

                                 
Query: 577   IPYETHHASISPQKIKIQYH 518
             +P  THH + +P K ++QYH
Sbjct: 30222 VPILTHHHTRNPPKTRVQYH 30281


 Score = 20.3 bits (38), Expect(2) = 0.84
 Identities = 6/21 (28%), Positives = 11/21 (51%)
 Frame = -1 / +2

                                  
Query: 410   EHSHREFPKTIGSHGLTSTSR 348
             +H+H  FP    + G+ S  +
Sbjct: 30302 DHNHSRFPNLARTFGVLSQKK 30364


>NCR_G_C2.256 Ncr_G_C2.256
          Length = 141304

 Score = 31.8 bits (63), Expect = 1.1
 Identities = 15/43 (34%), Positives = 20/43 (45%)
 Frame = -2 / +3

                                                        
Query: 388   PKQLGLTDLQVQAEFNTKDPNTKVLQSSRALNSQNLYRPKTSI 260
             P   G  DL +Q  FNT  PN  +   S    S  L  P+T++
Sbjct: 19929 PLVAGYIDLSLQGSFNTPFPNQAMSSPSLLAISAGLCHPRTNL 20057


 Score = 29.5 bits (58), Expect = 5.3
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -3 / +2

                                               
Query: 468  TQQSSPHTTIPSKTPAPRARTFSS*IPQNNWVSRT 364
            TQ SSP+T +P +       T ++ IP + W+S T
Sbjct: 8291 TQSSSPNTLLPLQKLCAGHCTTATTIPTSRWLSST 8395


>NCR_G_C2.393 Ncr_G_C2.393
          Length = 64366

 Score = 31.3 bits (62), Expect = 1.5
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = -1 / -2

                                                  
Query: 515   LNNTHTTPLLDINAKIHNNHPHIPLYLVKPLRRGQEH 405
             L++T T+P+  IN  + ++HPH  +  +  L R Q H
Sbjct: 16827 LSSTSTSPINRINTTLASHHPHDLIPGIGHLDRSQHH 16717


>NCR_G_C2.116 Ncr_G_C2.116
          Length = 72284

 Score = 31.3 bits (62), Expect = 1.5
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -1 / +1

                                                    
Query: 521   SYLNNTHTTPLLDINAKIHNNHPHIPLYLVKPLRRGQEH 405
             ++ NN  TT    + + IH+   H+P  L +P+ RG  H
Sbjct: 26698 AHKNN*VTTESRTVGSSIHHFSDHVPSSLDQPI*RGHRH 26814


>NCR_G_C2.059 Ncr_G_C2.059
          Length = 89435

 Score = 26.3 bits (51), Expect(2) = 1.8
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -3 / -2

                                       
Query: 639   PSNSV*HFMTILKTNTAHQSVFHMKP 562
             PS S+     ILK+   H S FH+ P
Sbjct: 33694 PSLSIRSLSRILKSRMRHPSPFHLPP 33617


 Score = 22.6 bits (43), Expect(2) = 1.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1 / -3

                             
Query: 716   LIRTQTSQHSLRSLAN 669
             L +T T  HSLR  +N
Sbjct: 33819 LYQTITYSHSLREYSN 33772


>NCR_G_C2.042_5 Ncr_G_C2.042_5.seq Continuation (5 of 6) of Ncr_G_C2.042
              from base 400001
          Length = 110000

 Score = 30.8 bits (61), Expect = 2.0
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = -2 / -1

                                           
Query: 316    LQSSRALNSQNLYRPKTSIKTEANLGHDT 230
              L SS  + SQN Y P TS  T A+ GH +
Sbjct: 106211 LPSSLPIFSQNRYNPSTSSPTPASPGHSS 106125


>NCR_G_C2.379 Ncr_G_C2.379
          Length = 245776

 Score = 30.8 bits (61), Expect = 2.0
 Identities = 17/57 (29%), Positives = 26/57 (44%)
 Frame = -2 / -3

                                                                       
Query: 424    CAEGKNILIVNSPKQLGLTDLQVQAEFNTKDPNTKVLQSSRALNSQNLYRPKTSIKT 254
              C    +I   ++PK  G T L  +     KDP+  + Q+ R   S NL  P   I++
Sbjct: 109466 CGRRNSICSSSTPKSTGGTYLCTRLSKLCKDPHAPI*QTHRKQTSTNLIAPAGVIQS 109296


>NCR_G_C2.042_6 Ncr_G_C2.042_6.seq Continuation (6 of 6) of
            Ncr_G_C2.042 from base 500001
          Length = 22496

 Score = 30.8 bits (61), Expect = 2.0
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = -2 / -2

                                         
Query: 316  LQSSRALNSQNLYRPKTSIKTEANLGHDT 230
            L SS  + SQN Y P TS  T A+ GH +
Sbjct: 6211 LPSSLPIFSQNRYNPSTSSPTPASPGHSS 6125


>NCR_G_C2.202 Ncr_G_C2.202
          Length = 148112

 Score = 30.4 bits (60), Expect = 2.8
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -3 / +1

                                  
Query: 471    DTQQSSPHTTIPSKTPAPRA 412
              DT QS PH   P+ TP PR+
Sbjct: 123748 DTPQSHPHAQPPAPTPPPRS 123807


>NCR_G_C2.085 Ncr_G_C2.085
          Length = 47946

 Score = 30.4 bits (60), Expect = 2.8
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +1 / -2

                                                 
Query: 463  LCILALMSSNGVVWVLFRYDIVF*SSVEICSRGGFHM 573
            LC+  L+      W  F   ++F SS +IC    FHM
Sbjct: 8801 LCLAGLLPDYHYPW*SFLSSLIFLSSPQICPSSLFHM 8691


>NCR_G_C2.342 Ncr_G_C2.342
          Length = 52841

 Score = 30.4 bits (60), Expect = 2.8
 Identities = 12/22 (54%), Positives = 13/22 (58%)
 Frame = -3 / -2

                                  
Query: 453  PHTTIPSKTPAPRARTFSS*IP 388
            PH  IPS+ P P  R  SS IP
Sbjct: 6994 PHLVIPSRLPRPATRPHSSLIP 6929


 Score = 24.4 bits (47), Expect(2) = 3.4
 Identities = 13/44 (29%), Positives = 17/44 (38%)
 Frame = -1 / +3

                                                         
Query: 527   TISYLNNTHTTPLLDINAKIHNNHPHIPLYLVKPLRRGQEHSHR 396
             T S   NT  T       +     PH+PL  + P  R + H  R
Sbjct: 25827 THSIFCNTTLTETTTTTGRQSPLRPHLPLLRLPPTHRPRRHHLR 25958


 Score = 23.5 bits (45), Expect(2) = 3.4
 Identities = 10/28 (35%), Positives = 13/28 (45%)
 Frame = -3 / +3

                                         
Query: 348   NLTPKILTQRFCNLPGP*TPKTYIGQKL 265
             N TP  L       PGP  P+  +G +L
Sbjct: 25980 NRTPPALPPALPLPPGPSCPRHRLGVRL 26063


>NCR_G_C2.452 Ncr_G_C2.452
          Length = 120796

 Score = 24.9 bits (48), Expect(2) = 3.1
 Identities = 10/22 (45%), Positives = 11/22 (49%)
 Frame = -3 / -3

                                   
Query: 486   GHQR*DTQQSSPHTTIPSKTPA 421
             GHQR D  +  P T I    PA
Sbjct: 31337 GHQRTDGTRFYPSTAIVCNFPA 31272


 Score = 23.1 bits (44), Expect(2) = 3.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3 / -2

                             
Query: 573   HMKPTTRAYLHRRSKY 526
             H +P+TR  +  RSK+
Sbjct: 31398 HRRPSTRGQIQTRSKF 31351


>NCR_G_C2.718 Ncr_G_C2.718
          Length = 48032

 Score = 26.3 bits (51), Expect(2) = 3.4
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -2 / -2

                          
Query: 508   TPIQHHYWTSTLR 470
             TPI HHY T+ LR
Sbjct: 23716 TPIHHHYHTAQLR 23678


 Score = 21.7 bits (41), Expect(2) = 3.4
 Identities = 4/10 (40%), Positives = 7/10 (70%)
 Frame = -2 / -2

                       
Query: 589   SPICIPYETH 560
             +P+C+P   H
Sbjct: 23734 NPVCLPTPIH 23705


>NCR_G_C2.736 Ncr_G_C2.736
          Length = 110835

 Score = 29.9 bits (59), Expect = 3.9
 Identities = 10/12 (83%), Positives = 10/12 (83%)
 Frame = -1 / +2

                         
Query: 194   KRCPPHFSIAQP 159
             KRCPPHFSI  P
Sbjct: 94388 KRCPPHFSIPWP 94423


>NCR_G_C2.635 Ncr_G_C2.635
          Length = 66507

 Score = 29.9 bits (59), Expect = 3.9
 Identities = 14/32 (43%), Positives = 19/32 (58%)
 Frame = +1 / -2

                                             
Query: 592   RVGFKNSHEMLYRVRGFMLLLRIWCGLARERR 687
             R G+K S  + YRVR  M+  R W G+ R +R
Sbjct: 14324 RKGWKVSMGVWYRVREAMMPWRCW*GMMRRQR 14229


>NCR_G_C2.219 Ncr_G_C2.219
          Length = 282514

 Score = 29.9 bits (59), Expect = 3.9
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -1 / +1

                                                   
Query: 461    NHPHIPLYLVKPLRRGQEHSHREFPKTIGSHGLTSTS 351
              + P  P Y + P RR + +SHR    T  S     TS
Sbjct: 154474 SRPTAPRYTLHPSRRPKSNSHRPTSPTTPSFPAVETS 154584


>NCR_G_C2.713 Ncr_G_C2.713
          Length = 19502

 Score = 29.9 bits (59), Expect = 3.9
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +1 / +2

                                       
Query: 604  KNSHEMLYRVRGFMLLLRIWCGLARER 684
            K    +LYR R   +L + WC LA ER
Sbjct: 7886 KGGQSLLYRKRSKNILYKRWCELALER 7966


>NCR_G_C2.712 Ncr_G_C2.712
          Length = 37287

 Score = 29.5 bits (58), Expect = 5.3
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = -1 / +1

                                           
Query: 671  NPHHILNSNMNPLTRYNIS*LFLKPTRLTNL 579
            NPH +L++++NPL +  + *L +   RL+ L
Sbjct: 2155 NPHPLLHAHLNPLLKLALK*LRILIHRLSTL 2247


>NCR_G_C2.438 Ncr_G_C2.438
          Length = 62276

 Score = 29.5 bits (58), Expect = 5.3
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -1 / -3

                                       
Query: 719   NLIRTQTSQHSLRSLANPHHILNSNM 642
             NL      + +L+SL NP H LN N+
Sbjct: 47994 NLNNLNKGKKTLKSLPNPDHNLNFNL 47917


>NCR_G_C2.677 Ncr_G_C2.677
          Length = 79423

 Score = 25.8 bits (50), Expect(2) = 5.7
 Identities = 12/43 (27%), Positives = 17/43 (38%)
 Frame = -3 / -1

                                                        
Query: 615   MTILKTNTAHQSVFHMKPTTRAYLHRRSKYNIISKQHPYNTIT 487
             ++I +TN  H+         R + H R K    S  H   T T
Sbjct: 74071 LSISRTNALHKPASWRNKARRCFHHERPKRRACSSFHTVKTRT 73943


 Score = 21.2 bits (40), Expect(2) = 5.7
 Identities = 7/16 (43%), Positives = 12/16 (74%)
 Frame = -1 / -3

                             
Query: 464   NNHPHIPLYLVKPLRR 417
             N HP++PL+ ++  RR
Sbjct: 73952 NPHPNVPLHRLE*RRR 73905


>NCR_G_C2.111 Ncr_G_C2.111
          Length = 322912

 Score = 29.0 bits (57), Expect = 7.3
 Identities = 17/61 (27%), Positives = 26/61 (41%)
 Frame = -1 / -3

                                                                         
Query: 566   NPPREHISTEDQNTISYLNNTHTTPLLDINAKIHNNHPHIPLYLVKPLRRGQEHSHREFP 387
             N PR  IS    +T SY      T +   +A +  + PH PL + +  +R +       P
Sbjct: 71747 NSPRHTISQ*PLSTRSYCTMPTATTVKQPSAAVCKSRPHFPLLVHRLTQRDRTIQQLPPP 71568

              
Query: 386   K 384
             K
Sbjct: 71567 K 71565


>NCR_G_C2.775 Ncr_G_C2.775
          Length = 60236

 Score = 29.0 bits (57), Expect = 7.3
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -1 / -2

                                       
Query: 527   TISYLNNTHTTPLLDINAKIHNNHPH 450
             T  +   THTTPL  IN  I+ N  H
Sbjct: 26731 TAVFPRTTHTTPLPSINININTNTNH 26654


>NCR_G_C2.441 Ncr_G_C2.441
          Length = 223615

 Score = 29.0 bits (57), Expect = 7.3
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = -3 / +3

                                                         
Query: 459   SSPHTTIPSKTPAPRARTFSS*IPQNNWVSRTYKYKPNLTPKIL 328
             S PH+ +  + P  R R  SS  P  +W S T   +P+ T   L
Sbjct: 69702 SIPHSRLSRRCPNRRHRGVSSLFPSVSWPSITDPTRPDPTQPTL 69833


>NCR_G_C2.746 Ncr_G_C2.746
          Length = 30246

 Score = 29.0 bits (57), Expect = 7.3
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -3 / -2

                                          
Query: 390   PQNNWVSRTYKYKPNLTPKILTQRFCNLP 304
             P++ WV  T++Y P +  + L +R   +P
Sbjct: 12533 PESRWVLSTFRYDPLVRQETLIERCLTIP 12447


>NCR_G_C2.308 Ncr_G_C2.308
          Length = 22688

 Score = 29.0 bits (57), Expect = 7.3
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +3 / +2

                         
Query: 162   LSYTEMWWTPFC 197
             LS+ ++WW+PFC
Sbjct: 15074 LSWGDLWWSPFC 15109


>NCR_G_C2.577 Ncr_G_C2.577
          Length = 63063

 Score = 29.0 bits (57), Expect = 7.3
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +2 / -2

                              
Query: 482   CPVMVLYGCCLDMILYF 532
             C ++ L+GCCL ++L F
Sbjct: 48188 C*ILPLFGCCLSLVLMF 48138


>NCR_G_C2.544 Ncr_G_C2.544
          Length = 115054

 Score = 21.7 bits (41), Expect(3) = 9.3
 Identities = 6/14 (42%), Positives = 9/14 (63%)
 Frame = +1 / -1

                           
Query: 409   SCPRRRGFTRYSGM 450
             +C   RGF  +SG+
Sbjct: 78163 ACRFFRGFRMWSGV 78122


 Score = 21.2 bits (40), Expect(3) = 9.3
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +2 / -2

                    
Query: 380   LFWGIHD 400
             LFWG HD
Sbjct: 78207 LFWGTHD 78187


 Score = 20.8 bits (39), Expect(3) = 9.3
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +3 / -1

                                
Query: 240   PKFASVLMEVFGLYKFWEF 296
             P F S  M VFG    WE+
Sbjct: 78292 PLFLSFCMCVFGSALGWEY 78236


  Database: /phillip/Ncr/Ncr_G
    Posted date:  Jan 24, 2002  1:55 PM
  Number of letters in database: 37,969,317
  Number of sequences in database:  995
  
Lambda     K      H
   0.318    0.135    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 78227134
Number of Sequences: 995
Number of extensions: 1233859
Number of successful extensions: 57317
Number of sequences better than 10.0: 33
length of query: 329
length of database: 12,656,439
effective HSP length: 47
effective length of query: 282
effective length of database: 12,609,674
effective search space: 3555928068
effective search space used: 3555928068
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 56 (28.6 bits)