TBLASTX 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCPvsNca/blast/2570_C06_F12ZT5.seq
         (769 letters)

Database: /phillip/Ncr/Ncr_G
           995 sequences; 37,969,317 total letters

Searching....................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

NCR_G_C2.013 Ncr_G_C2.013                                              35  0.087
NCR_G_C2.295 Ncr_G_C2.295                                              34  0.22
NCR_G_C2.619 Ncr_G_C2.619                                              32  0.58
NCR_G_C2.019 Ncr_G_C2.019                                              32  0.80
NCR_G_C2.271 Ncr_G_C2.271                                              31  1.5
NCR_G_C2.196 Ncr_G_C2.196                                              30  2.1
NCR_G_C2.367 Ncr_G_C2.367                                              30  2.1
NCR_G_C2.544 Ncr_G_C2.544                                              30  2.1
NCR_G_C2.426 Ncr_G_C2.426                                              30  2.1
NCR_G_C2.775 Ncr_G_C2.775                                              30  2.9
NCR_G_C2.066 Ncr_G_C2.066                                              30  2.9
NCR_G_C2.230 Ncr_G_C2.230                                              30  2.9
NCR_G_C2.453 Ncr_G_C2.453                                              30  2.9
NCR_G_C2.611 Ncr_G_C2.611                                              29  3.9
NCR_G_C2.437 Ncr_G_C2.437                                              29  3.9
NCR_G_C2.519 Ncr_G_C2.519                                              29  3.9
NCR_G_C2.508 Ncr_G_C2.508                                              29  3.9
NCR_G_C2.007 Ncr_G_C2.007                                              29  3.9
NCR_G_C2.339 Ncr_G_C2.339                                              29  3.9
NCR_G_C2.343 Ncr_G_C2.343                                              29  5.4
NCR_G_C2.615 Ncr_G_C2.615                                              29  5.4
NCR_G_C2.321 Ncr_G_C2.321                                              29  5.4
NCR_G_C2.677 Ncr_G_C2.677                                              29  5.4
NCR_G_C2.077 Ncr_G_C2.077                                              26  5.9
NCR_G_C2.203 Ncr_G_C2.203                                              29  7.4
NCR_G_C2.246 Ncr_G_C2.246                                              29  7.4
NCR_G_C2.238 Ncr_G_C2.238                                              29  7.4
NCR_G_C2.127 Ncr_G_C2.127                                              29  7.4
NCR_G_C2.124 Ncr_G_C2.124                                              29  7.4
NCR_G_C2.734 Ncr_G_C2.734                                              29  7.4
NCR_G_C2.130 Ncr_G_C2.130                                              29  7.4
NCR_G_C2.164 Ncr_G_C2.164                                              29  7.4

>NCR_G_C2.013 Ncr_G_C2.013
          Length = 121415

 Score = 35.0 bits (70), Expect = 0.087
 Identities = 13/31 (41%), Positives = 18/31 (57%)
 Frame = -2 / -3

                                            
Query: 498   NRPTPGSRLTRHQAPLPYTIPQKKVFCGQRP 406
             ++P P S L RH  PLP   P  +++ GQ P
Sbjct: 90816 SQPPPASGLARHSLPLPPARPPTRLWSGQSP 90724


>NCR_G_C2.295 Ncr_G_C2.295
          Length = 73468

 Score = 33.6 bits (67), Expect = 0.22
 Identities = 13/28 (46%), Positives = 16/28 (56%)
 Frame = +1 / +3

                                         
Query: 481   PGCGAVVFHDILQEQFLPVFFLCLILPF 564
             P    +  H +LQ   LPVFFLC  LP+
Sbjct: 42615 PPISIITNHILLQRAHLPVFFLCTYLPW 42698


>NCR_G_C2.619 Ncr_G_C2.619
          Length = 9007

 Score = 32.2 bits (64), Expect = 0.58
 Identities = 13/31 (41%), Positives = 18/31 (57%)
 Frame = +1 / +1

                                          
Query: 490 GAVVFHDILQEQFLPVFFLCLILPFSSFALY 582
           G + FHD + + F  +FFL L LP   + LY
Sbjct: 562 GWLFFHDFILDIFFSLFFLFLFLPLFYWKLY 654


>NCR_G_C2.019 Ncr_G_C2.019
          Length = 128680

 Score = 31.8 bits (63), Expect = 0.80
 Identities = 17/51 (33%), Positives = 24/51 (46%)
 Frame = -1 / -1

                                                                
Query: 496   PPHTRESSHQASGAITVHHPPKKSFLRPTTRKAIKWNPKGSPQFKDSRGKP 344
             PP T  S+   S  +TV  P   S  RP++R  +   P    +F+ SR  P
Sbjct: 91405 PPSTAASTPSPSSPVTVSVPRLPSPSRPSSRPTMSPLPGSRSRFRVSRTTP 91253


>NCR_G_C2.271 Ncr_G_C2.271
          Length = 96618

 Score = 30.8 bits (61), Expect = 1.5
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -1 / +3

                                                
Query: 511   YREIQPPHTRESSHQASGAITVHHPPKKSFLRPTT 407
             +  I PPH    S+  S  +T  HPP +    P T
Sbjct: 82767 HHHITPPHQNNLSNNPSQNVTNPHPPTRGLRPPQT 82871


>NCR_G_C2.196 Ncr_G_C2.196
          Length = 18702

 Score = 30.4 bits (60), Expect = 2.1
 Identities = 10/22 (45%), Positives = 15/22 (67%)
 Frame = -3 / -3

                                  
Query: 557  RIRQRKNTGRNCSCKIS*NTTA 492
            RIR+  N  R+CSC +  N+T+
Sbjct: 4969 RIREASNASRSCSCSLERNSTS 4904


>NCR_G_C2.367 Ncr_G_C2.367
          Length = 88285

 Score = 30.4 bits (60), Expect = 2.1
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -1 / -3

                                       
Query: 448   VHHPPKKSFLRPTTRKAIKWNPKGSP 371
             +H PP+K  +   T +  KW PK  P
Sbjct: 29021 IHWPPRKGLMNFLTDELSKWLPKAKP 28944


>NCR_G_C2.544 Ncr_G_C2.544
          Length = 115054

 Score = 30.4 bits (60), Expect = 2.1
 Identities = 12/29 (41%), Positives = 18/29 (61%)
 Frame = -1 / +1

                                          
Query: 526   IVLVKYREIQPPHTRESSHQASGAITVHH 440
             +V+V+ R  +   +R+S HQ SGA   HH
Sbjct: 13609 VVVVRARRNRQGGSRKSGHQCSGAAPEHH 13695


>NCR_G_C2.426 Ncr_G_C2.426
          Length = 53350

 Score = 30.4 bits (60), Expect = 2.1
 Identities = 17/46 (36%), Positives = 23/46 (49%)
 Frame = -3 / +2

                                                           
Query: 536   TGRNCSCKIS*NTTAPHPGVVSPGIRRHYRTPSPKKKFFAANDPES 399
             T    S   S  TTA H  + SPG+R+   + SPK++   AN   S
Sbjct: 17567 TTSKTSTPTSTRTTAHHLPLRSPGVRQLKPSSSPKRRTTRANRSRS 17704


>NCR_G_C2.775 Ncr_G_C2.775
          Length = 60236

 Score = 29.9 bits (59), Expect = 2.9
 Identities = 13/31 (41%), Positives = 16/31 (50%)
 Frame = -3 / -2

                                            
Query: 476   VSPGIRRHYRTPSPKKKFFAANDPESNKMEP 384
             VSP    H+ TP P     A + P +N MEP
Sbjct: 15229 VSP*HATHFSTPPPPDSQDAMSQPSNNLMEP 15137


>NCR_G_C2.066 Ncr_G_C2.066
          Length = 117949

 Score = 29.9 bits (59), Expect = 2.9
 Identities = 13/29 (44%), Positives = 17/29 (57%)
 Frame = +3 / -2

                                          
Query: 375   LPLGFHFIAFRVVGRKKLFFGGWCTVMAP 461
             +P    F+A R +GRK    GG CTV+ P
Sbjct: 56289 IPWHKSFLASRALGRKVKDQGGTCTVVVP 56203


>NCR_G_C2.230 Ncr_G_C2.230
          Length = 223934

 Score = 29.9 bits (59), Expect = 2.9
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -3 / -1

                                              
Query: 524   CSCKIS*NTTAPHPGVVSPGIRRHYRTPSPKKK 426
             CSC  S +   PH   V  GI ++ R P  +KK
Sbjct: 76940 CSCVSSLSVNIPHRSTVWTGIIKYKRNP*KRKK 76842


>NCR_G_C2.453 Ncr_G_C2.453
          Length = 52404

 Score = 29.9 bits (59), Expect = 2.9
 Identities = 13/28 (46%), Positives = 18/28 (63%)
 Frame = -1 / +1

                                         
Query: 427   SFLRPTTRKAIKWNPKGSPQFKDSRGKP 344
             S  +P +R AIK +P GSP+ + SR  P
Sbjct: 36649 SATQPISRTAIKLSPAGSPERRTSRPIP 36732


>NCR_G_C2.611 Ncr_G_C2.611
          Length = 58889

 Score = 29.5 bits (58), Expect = 3.9
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = -2 / +1

                                                             
Query: 525   LFL*NIVKYNRPTPGSRLTRHQAPLPYTIPQKKVFCGQRPGKQ*NGTP 382
             LF   I+KYN   P    T   + + Y I  KK    +RP ++ N TP
Sbjct: 20977 LFFLVIIKYNISPPNPPFTLTISRILY*I*FKKSILRKRPNRRINSTP 21120


>NCR_G_C2.437 Ncr_G_C2.437
          Length = 118197

 Score = 29.5 bits (58), Expect = 3.9
 Identities = 11/24 (45%), Positives = 14/24 (57%)
 Frame = -1 / +1

                                     
Query: 508   REIQPPHTRESSHQASGAITVHHP 437
             RE++  H R S H A GA+  H P
Sbjct: 72838 RELRTHHARASVHPARGAVQHHRP 72909


>NCR_G_C2.519 Ncr_G_C2.519
          Length = 168333

 Score = 29.5 bits (58), Expect = 3.9
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -3 / -1

                                
Query: 572    KEEKGRIRQRKNTGRNCS 519
              K  KG  R R+N GRNCS
Sbjct: 134784 KSTKGLFRGRRNCGRNCS 134731


>NCR_G_C2.508 Ncr_G_C2.508
          Length = 105197

 Score = 29.5 bits (58), Expect = 3.9
 Identities = 14/36 (38%), Positives = 16/36 (43%)
 Frame = -1 / -3

                                                 
Query: 511   YREIQPPHTRESSHQASGAITVHHPPKKSFLRPTTR 404
             +R I PPH R  SH   G     HP  K   R + R
Sbjct: 33297 FRVICPPHPRLQSHPRPGVQHHLHPDTKGTSRTSER 33190


>NCR_G_C2.007 Ncr_G_C2.007
          Length = 114811

 Score = 29.5 bits (58), Expect = 3.9
 Identities = 11/23 (47%), Positives = 13/23 (55%)
 Frame = +3 / -2

                                    
Query: 351   PRESLNWGLPLGFHFIAFRVVGR 419
             PR  LNW + L    IAF+  GR
Sbjct: 61437 PRRGLNWNMSLPLDLIAFQAWGR 61369


>NCR_G_C2.339 Ncr_G_C2.339
          Length = 67925

 Score = 29.5 bits (58), Expect = 3.9
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +1 / +3

                                 
Query: 526   FLPVFFLCLILPFSSFALYK 585
             FLP+FF C  L F  F L K
Sbjct: 26829 FLPIFFFCFFLLFPFFCLKK 26888


>NCR_G_C2.343 Ncr_G_C2.343
          Length = 142167

 Score = 29.0 bits (57), Expect = 5.4
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -1 / -3

                                              
Query: 487   TRESSHQASGAITVHHPPKKSFLRPTTRKAIKW 389
             +RE +    GAI+V  PP  +   PT +  ++W
Sbjct: 67978 SRERTSHCGGAISVRRPPTTATPCPTYQTRLQW 67880


>NCR_G_C2.615 Ncr_G_C2.615
          Length = 130067

 Score = 29.0 bits (57), Expect = 5.4
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = +2 / -3

                        
Query: 248   GCGGYPQGDRY 280
             GCGG P GDRY
Sbjct: 20451 GCGGVPHGDRY 20419


>NCR_G_C2.321 Ncr_G_C2.321
          Length = 66076

 Score = 29.0 bits (57), Expect = 5.4
 Identities = 14/36 (38%), Positives = 19/36 (51%)
 Frame = -2 / +2

                                                 
Query: 495   RPTPGSRLTRHQAPLPYTIPQKKVFCGQRPGKQ*NG 388
             RP P SR  R Q     T+P  ++ C +RP  Q +G
Sbjct: 45041 RPRPASRRLRGQVNHLSTMPFYQINCQRRPAVQQSG 45148


>NCR_G_C2.677 Ncr_G_C2.677
          Length = 79423

 Score = 29.0 bits (57), Expect = 5.4
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -3 / +3

                                   
Query: 545   RKNTGRNCSCKIS*NTTAPHPG 480
             R+N   NCS ++S    +PHPG
Sbjct: 57363 RRNVPNNCSFRVSN*PNSPHPG 57428


>NCR_G_C2.077 Ncr_G_C2.077
          Length = 64403

 Score = 25.8 bits (50), Expect(2) = 5.9
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3 / +3

                              
Query: 422   FAANDPESNKMEPQREP 372
             F  NDP + ++ P+ +P
Sbjct: 24423 FIVNDPNTEQLGPETDP 24473


 Score = 20.8 bits (39), Expect(2) = 5.9
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = -2 / +3

                     
Query: 465   HQAPLPYT 442
             H  PLPYT
Sbjct: 24363 HSLPLPYT 24386


>NCR_G_C2.203 Ncr_G_C2.203
          Length = 128723

 Score = 28.6 bits (56), Expect = 7.4
 Identities = 10/26 (38%), Positives = 13/26 (49%)
 Frame = -3 / -1

                                        
Query: 500    TTAPHPGVVSPGIRRHYRTPSPKKKF 423
              +  P P   +P   RH R PSP+  F
Sbjct: 124772 SNCPQPQACTPAPTRHARRPSPRSHF 124695


>NCR_G_C2.246 Ncr_G_C2.246
          Length = 86567

 Score = 28.6 bits (56), Expect = 7.4
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -1 / +2

                                    
Query: 502   IQPPHTRESSHQASGAITVHHPP 434
             + PPH      Q+  A+  HHPP
Sbjct: 36317 LPPPHLHSPKAQSPPALLCHHPP 36385


>NCR_G_C2.238 Ncr_G_C2.238
          Length = 254242

 Score = 28.6 bits (56), Expect = 7.4
 Identities = 10/15 (66%), Positives = 11/15 (72%)
 Frame = -2 / +3

                             
Query: 489    TPGSRLTRHQAPLPY 445
              TPG RL RHQ P P+
Sbjct: 140031 TPGGRLHRHQMPEPF 140075


>NCR_G_C2.127 Ncr_G_C2.127
          Length = 41672

 Score = 28.6 bits (56), Expect = 7.4
 Identities = 10/15 (66%), Positives = 11/15 (72%)
 Frame = -2 / -1

                            
Query: 492   PTPGSRLTRHQAPLP 448
             P PGSR  RH+ PLP
Sbjct: 12374 PRPGSRRLRHRRPLP 12330


>NCR_G_C2.124 Ncr_G_C2.124
          Length = 36105

 Score = 28.6 bits (56), Expect = 7.4
 Identities = 14/39 (35%), Positives = 19/39 (47%)
 Frame = -3 / +3

                                                  
Query: 485 PGVVSPGIRRHYRTPSPKKKFFAANDPESNKMEPQREPP 369
           P +V   I      P P KK  +    E+ +MEP+RE P
Sbjct: 33  PTIVPLAISACSPLPPPPKKTVSMGSKETAEMEPRREFP 149


>NCR_G_C2.734 Ncr_G_C2.734
          Length = 32712

 Score = 28.6 bits (56), Expect = 7.4
 Identities = 11/33 (33%), Positives = 12/33 (36%)
 Frame = -1 / -2

                                              
Query: 496   PPHTRESSHQASGAITVHHPPKKSFLRPTTRKA 398
             PPH  E   Q    +T H PP      P    A
Sbjct: 17078 PPHFTEQQQQQHAPLTTHQPPPSKSSPPPPNTA 16980


>NCR_G_C2.130 Ncr_G_C2.130
          Length = 35253

 Score = 28.6 bits (56), Expect = 7.4
 Identities = 11/23 (47%), Positives = 15/23 (64%)
 Frame = +3 / -3

                                   
Query: 360  SLNWGLPLGFHFIAFRVVGRKKL 428
            SLN G+P G+H++   V   KKL
Sbjct: 9019 SLNGGVPSGYHYLQHSVQCHKKL 8951


>NCR_G_C2.164 Ncr_G_C2.164
          Length = 75564

 Score = 28.6 bits (56), Expect = 7.4
 Identities = 11/32 (34%), Positives = 17/32 (52%)
 Frame = -1 / -2

                                             
Query: 496   PPHTRESSHQASGAITVHHPPKKSFLRPTTRK 401
             PPH R +SH   G++ +  P   +  RP  +K
Sbjct: 34235 PPHRRSNSHHLLGSLPLRLPLPPASQRPLHQK 34140


  Database: /phillip/Ncr/Ncr_G
    Posted date:  Jan 24, 2002  1:55 PM
  Number of letters in database: 37,969,317
  Number of sequences in database:  995
  
Lambda     K      H
   0.318    0.135    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 51595117
Number of Sequences: 995
Number of extensions: 666102
Number of successful extensions: 42883
Number of sequences better than 10.0: 32
length of query: 256
length of database: 12,656,439
effective HSP length: 47
effective length of query: 208
effective length of database: 12,609,674
effective search space: 2622812192
effective search space used: 2622812192
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 55 (28.1 bits)