TBLASTX 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCPvsNca/blast/Fgr-C_02_G17_T3.seq
         (758 letters)

Database: /phillip/Ncr/Ncr_G
           995 sequences; 37,969,317 total letters

Searching....................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

NCR_G_C2.019 Ncr_G_C2.019                                              30  0.31
NCR_G_C2.128 Ncr_G_C2.128                                              33  0.42
NCR_G_C2.218 Ncr_G_C2.218                                              28  0.42
NCR_G_C2.265 Ncr_G_C2.265                                              31  1.1
NCR_G_C2.574 Ncr_G_C2.574                                              31  1.5
NCR_G_C2.337 Ncr_G_C2.337                                              31  1.5
NCR_G_C2.336 Ncr_G_C2.336                                              31  1.5
NCR_G_C2.788 Ncr_G_C2.788                                              31  1.5
NCR_G_C2.194 Ncr_G_C2.194                                              30  2.0
NCR_G_C2.756 Ncr_G_C2.756                                              25  2.4
NCR_G_C2.647 Ncr_G_C2.647                                              29  2.5
NCR_G_C2.192 Ncr_G_C2.192                                              29  3.7
NCR_G_C2.446 Ncr_G_C2.446                                              29  3.9
NCR_G_C2.560 Ncr_G_C2.560                                              29  3.9
NCR_G_C2.271 Ncr_G_C2.271                                              29  3.9
NCR_G_C2.110 Ncr_G_C2.110                                              26  4.2
NCR_G_C2.541 Ncr_G_C2.541                                              29  5.3
NCR_G_C2.445 Ncr_G_C2.445                                              29  5.3
NCR_G_C2.167 Ncr_G_C2.167                                              29  5.3
NCR_G_C2.441 Ncr_G_C2.441                                              29  5.3
NCR_G_C2.642 Ncr_G_C2.642                                              29  5.3
NCR_G_C2.339 Ncr_G_C2.339                                              29  7.3
NCR_G_C2.106 Ncr_G_C2.106                                              29  7.3
NCR_G_C2.847 Ncr_G_C2.847                                              29  7.3
NCR_G_C2.681 Ncr_G_C2.681                                              29  7.3
NCR_G_C2.379 Ncr_G_C2.379                                              29  7.3
NCR_G_C2.219 Ncr_G_C2.219                                              29  7.3
NCR_G_C2.556 Ncr_G_C2.556                                              29  7.3
NCR_G_C2.423 Ncr_G_C2.423                                              29  7.3
NCR_G_C2.714 Ncr_G_C2.714                                              24  8.0
NCR_G_C2.125 Ncr_G_C2.125                                              25  9.2

>NCR_G_C2.019 Ncr_G_C2.019
          Length = 128680

 Score = 30.4 bits (60), Expect(2) = 0.31
 Identities = 13/39 (33%), Positives = 18/39 (45%)
 Frame = -1 / -1

                                                    
Query: 185   CSRRERQEPGEW*SRAFRRGFWCK*RSGLVEKRCASCRI 69
             C RR R+  G W +     G W + R G+   R  S R+
Sbjct: 18586 CLRRPRRSEGYWSTMISLPGIWMRNRYGVNSSRSLSSRV 18470


 Score = 20.8 bits (39), Expect(2) = 0.31
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2 / -3

                             
Query: 226   VTGIASLEGELDTSVL 179
             V+G   LEG LDT +L
Sbjct: 18629 VSGSCILEGVLDTMLL 18582


>NCR_G_C2.128 Ncr_G_C2.128
          Length = 227066

 Score = 32.7 bits (65), Expect = 0.42
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +2 / -1

                                              
Query: 80    RHISSLPNHFFTYTKTLFEMPETTTPQVPASLG 178
             RH++SLP    T  +T+ E+P T  PQ  +S G
Sbjct: 33281 RHLASLPAPSRTSPQTIVEVPRTKVPQPRSSKG 33183


>NCR_G_C2.218 Ncr_G_C2.218
          Length = 129490

 Score = 27.6 bits (54), Expect(2) = 0.42
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -1 / +1

                                       
Query: 122    WCK*RSGLVEKRCASCRIPAARGIH 48
              WC  RS  +  R +SC  P  R IH
Sbjct: 113107 WCTLRSSTIRPRRSSCWWPLNREIH 113181


 Score = 23.1 bits (44), Expect(2) = 0.42
 Identities = 8/15 (53%), Positives = 9/15 (59%)
 Frame = -3 / +2

                             
Query: 66     CSPGDPLVLERPPPR 22
              C+PG P  L  P PR
Sbjct: 113225 CAPGGPRKLPPPKPR 113269


>NCR_G_C2.265 Ncr_G_C2.265
          Length = 91342

 Score = 31.3 bits (62), Expect = 1.1
 Identities = 16/42 (38%), Positives = 21/42 (49%)
 Frame = +1 / +2

                                                       
Query: 97    TKPLLHLHQNPLRNARDYHSPGSCLSRREQRYQVLLQDWQCP 222
             TKP  H + N ++N    HSP S   R   R  + LQ W+ P
Sbjct: 40391 TKP*YHNNNNNIQNVPVSHSPHSRRRRCRSRRLLHLQVWRQP 40516


>NCR_G_C2.574 Ncr_G_C2.574
          Length = 180542

 Score = 30.8 bits (61), Expect = 1.5
 Identities = 12/35 (34%), Positives = 20/35 (56%)
 Frame = -3 / +3

                                                
Query: 582   METPNVSVKPSLMLDNCGIINSPHFCLLWSPLLPS 478
             +ET  + V+ +   +N G++  PH  L   PL+PS
Sbjct: 87027 LETSAIRVQTARFFNNSGVLPPPHHILPAVPLIPS 87131


>NCR_G_C2.337 Ncr_G_C2.337
          Length = 9069

 Score = 30.8 bits (61), Expect = 1.5
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -3 / -2

                                   
Query: 534  CGIINSPHFCLLWSPLLPSKPCY 466
            C + +S  F L+ SPLLPS  CY
Sbjct: 4313 CRVKSSQSFSLVLSPLLPSSICY 4245


>NCR_G_C2.336 Ncr_G_C2.336
          Length = 27241

 Score = 30.8 bits (61), Expect = 1.5
 Identities = 11/23 (47%), Positives = 16/23 (68%)
 Frame = +3 / +3

                                   
Query: 399  PSWKITGSWHLGQ*HQPSIKPVY 467
            PSW++ GS HLG  H+  I+ V+
Sbjct: 9090 PSWQLNGSEHLGSFHRRLIESVH 9158


>NCR_G_C2.788 Ncr_G_C2.788
          Length = 27212

 Score = 30.8 bits (61), Expect = 1.5
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3 / -2

                              
Query: 516   PHFCLLWSPLLPSKPCY 466
             P +  LWSP +P+ PC+
Sbjct: 23218 PRYLFLWSPRIPTSPCH 23168


>NCR_G_C2.194 Ncr_G_C2.194
          Length = 74501

 Score = 30.4 bits (60), Expect = 2.0
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +1 / -1

                                                  
Query: 478   RREQW*PKQTKMGGVYYTTIIEH*RRFYRDIWRLHES 588
             ++E W    + +G V+ +T ++H RRF RD  + + S
Sbjct: 32045 KKEDWTTPSSLVGHVHLSTKLKHARRFSRDAQKRNHS 31935


>NCR_G_C2.756 Ncr_G_C2.756
          Length = 88549

 Score = 24.9 bits (48), Expect(2) = 2.4
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +1 / +1

                                     
Query: 49    WIPRAAGIRHEAHLFSTKPLLHLH 120
             WI   A         +T PLLHLH
Sbjct: 39256 WISSTARSSTSGRFMTTFPLLHLH 39327


 Score = 23.1 bits (44), Expect(2) = 2.4
 Identities = 11/24 (45%), Positives = 13/24 (53%)
 Frame = +3 / +1

                                     
Query: 174   SARTEVSSSPSRLAMPVTSAFFRT 245
             S R   +S PSRL   VTS +  T
Sbjct: 39448 STRARTTSPPSRLPRRVTSPWHPT 39519


>NCR_G_C2.647 Ncr_G_C2.647
          Length = 70271

 Score = 29.5 bits (58), Expect(2) = 2.5
 Identities = 15/40 (37%), Positives = 20/40 (49%)
 Frame = +2 / -1

                                                     
Query: 122   KTLFEMPETTTPQVPASLGENRGIKFSFKTGNARYQCVLQ 241
             KT+ E P+T    +   L    G+ F   T N R+QCV Q
Sbjct: 63104 KTI*EAPKTRKVWMVDGLFHYTGVSFEPSTLNRRFQCV*Q 62985


 Score = 18.5 bits (34), Expect(2) = 2.5
 Identities = 5/7 (71%), Positives = 7/7 (99%)
 Frame = +1 / -2

                    
Query: 61    AAGIRHE 81
             A+GIRH+
Sbjct: 63169 ASGIRHQ 63149


>NCR_G_C2.192 Ncr_G_C2.192
          Length = 20973

 Score = 28.6 bits (56), Expect(2) = 3.7
 Identities = 15/45 (33%), Positives = 18/45 (39%)
 Frame = +1 / +1

                                                          
Query: 73    RHEAHLFSTKPLLHLHQNPLRNARDYHSPGSCLSRREQRYQVLLQ 207
             R    LFS + L   HQ P    R Y   G  L + E  Y  + Q
Sbjct: 16132 RRIGSLFSPRCLDSFHQPPACLGRSYRQTGLALKKSENSYVDMFQ 16266


 Score = 18.9 bits (35), Expect(2) = 3.7
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +1 / +2

                              
Query: 211   WQCPLPVRSSGPLRLVS 261
             W C   VRS G +  VS
Sbjct: 16253 WICSSGVRSVGSIDCVS 16303


>NCR_G_C2.446 Ncr_G_C2.446
          Length = 145200

 Score = 29.5 bits (58), Expect = 3.9
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -1 / -3

                                              
Query: 383   FSVWVDSVEETESEEFWREAFLRSLDSW*ASIL 285
             F VWVDS  E ESE+  R       D W*  ++
Sbjct: 40216 F*VWVDSKIEIESEDMLRLRLAEDGDVW*RYVM 40118


>NCR_G_C2.560 Ncr_G_C2.560
          Length = 32286

 Score = 29.5 bits (58), Expect = 3.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1 / +1

                                      
Query: 28    WRPL*N*WIPRAAGIRHEAHLFSTK 102
             W  +*N   P   G RH AH+ +T+
Sbjct: 28201 WPCI*NRCFPGVPGTRHTAHIMTTQ 28275


>NCR_G_C2.271 Ncr_G_C2.271
          Length = 96618

 Score = 29.5 bits (58), Expect = 3.9
 Identities = 13/42 (30%), Positives = 18/42 (41%)
 Frame = +1 / -1

                                                       
Query: 55    PRAAGIRHEAHLFSTKPLLHLHQNPLRNARDYHSPGSCLSRR 180
             P    +   A  +   PL+H H  P+ N +DY    S   RR
Sbjct: 22398 PLVISLATAAIRYGCSPLVHTHLVPITNTQDYRPKVSSSRRR 22273


>NCR_G_C2.110 Ncr_G_C2.110
          Length = 102633

 Score = 25.8 bits (50), Expect(2) = 4.2
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +1 / +1

                                              
Query: 241   GPLRLVSSPNTYCGFKIEAYQLSSERKKASRQN 339
             GPL L++ PN+Y   + E   LS      + +N
Sbjct: 94948 GPLELLALPNSYALVRGEELALSQPEPAPTEEN 95046


 Score = 21.2 bits (40), Expect(2) = 4.2
 Identities = 7/15 (46%), Positives = 11/15 (72%)
 Frame = +2 / +1

                            
Query: 86    ISSLPNHFFTYTKTL 130
             +SSLP+H  + T T+
Sbjct: 94822 LSSLPDHVLSATSTI 94866


>NCR_G_C2.541 Ncr_G_C2.541
          Length = 108788

 Score = 29.0 bits (57), Expect = 5.3
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +2 / +3

                                        
Query: 170   SLGENRGIKFSFKTGNARYQCVLQDRS 250
             S+ E   +KF  KT + ++QC L DR+
Sbjct: 91935 SILEQGAVKFVIKTKDQKWQCTLLDRA 92015


>NCR_G_C2.445 Ncr_G_C2.445
          Length = 167464

 Score = 29.0 bits (57), Expect = 5.3
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -3 / -2

                                  
Query: 81     LVPNSCSPGDPLVLERPPPR 22
              L P+ C P  PLVL  P PR
Sbjct: 144819 LTPHFCYPSHPLVLPLPSPR 144760


>NCR_G_C2.167 Ncr_G_C2.167
          Length = 30999

 Score = 29.0 bits (57), Expect = 5.3
 Identities = 12/34 (35%), Positives = 16/34 (46%)
 Frame = +1 / +3

                                              
Query: 58   RAAGIRHEAHLFSTKPLLHLHQNPLRNARDYHSP 159
            R +   H  H     PL H H +PLR  R  ++P
Sbjct: 4467 RCSSHHHRHHHDHQLPLSHTHHSPLRRKRPPNTP 4568


>NCR_G_C2.441 Ncr_G_C2.441
          Length = 223615

 Score = 29.0 bits (57), Expect = 5.3
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1 / +3

                                    
Query: 55     PRAAGIRHEAHLFSTKPLLHLH 120
              P +AG  H A   +T+P LHLH
Sbjct: 106986 PLSAGTHHPATATATQPRLHLH 107051


>NCR_G_C2.642 Ncr_G_C2.642
          Length = 116778

 Score = 29.0 bits (57), Expect = 5.3
 Identities = 10/24 (41%), Positives = 13/24 (53%)
 Frame = -3 / -1

                                     
Query: 87    MCLVPNSCSPGDPLVLERPPPRGA 16
             +CL  NSC+P  P  +  P P  A
Sbjct: 57216 LCLATNSCTPQTPPAITTPNPANA 57145


>NCR_G_C2.339 Ncr_G_C2.339
          Length = 67925

 Score = 28.6 bits (56), Expect = 7.3
 Identities = 10/17 (58%), Positives = 11/17 (63%)
 Frame = -1 / -2

                              
Query: 518   PPIFVCFGHHCSLRSLV 468
             PP  VCFG  CS R +V
Sbjct: 35299 PPPVVCFGFSCSFRDVV 35249


>NCR_G_C2.106 Ncr_G_C2.106
          Length = 177512

 Score = 28.6 bits (56), Expect = 7.3
 Identities = 10/16 (62%), Positives = 12/16 (74%)
 Frame = -3 / -3

                             
Query: 96    REEMCLVPNSCSPGDP 49
             R+ MC+VP S SPG P
Sbjct: 40257 RDNMCVVPPSDSPGQP 40210


>NCR_G_C2.847 Ncr_G_C2.847
          Length = 44665

 Score = 28.6 bits (56), Expect = 7.3
 Identities = 12/38 (31%), Positives = 19/38 (49%)
 Frame = +1 / +2

                                                   
Query: 76    HEAHLFSTKPLLHLHQNPLRNARDYHSPGSCLSRREQR 189
             H+A     +P LHL + P R+ + +H+ G     R  R
Sbjct: 22322 HDACWQRCQPHLHLGRRPRRHGQHHHTRGQAAQARRGR 22435


>NCR_G_C2.681 Ncr_G_C2.681
          Length = 124507

 Score = 28.6 bits (56), Expect = 7.3
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -3 / +3

                                    
Query: 69    SCSPGDPLVLERPPPRGAPAFVP 1
             SC P  PL   RPP R  PA +P
Sbjct: 68565 SCRPSPPLHSLRPPGRPHPAALP 68633


>NCR_G_C2.379 Ncr_G_C2.379
          Length = 245776

 Score = 28.6 bits (56), Expect = 7.3
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -3 / -3

                                               
Query: 564    SVKPSLMLDNCGIINSPHFCLLWSPLLPSKPCY 466
              S K S  L N  + +   F +LW  ++P  PC+
Sbjct: 241007 STKRSECLANASLEHVTDFGMLWGKIIPRLPCH 240909


>NCR_G_C2.219 Ncr_G_C2.219
          Length = 282514

 Score = 28.6 bits (56), Expect = 7.3
 Identities = 9/17 (52%), Positives = 12/17 (69%)
 Frame = -3 / +1

                               
Query: 558    KPSLMLDNCGIINSPHF 508
              KP L+   CG+I +PHF
Sbjct: 255775 KPPLLSSFCGVIETPHF 255825


>NCR_G_C2.556 Ncr_G_C2.556
          Length = 19516

 Score = 28.6 bits (56), Expect = 7.3
 Identities = 11/17 (64%), Positives = 12/17 (69%)
 Frame = -3 / -2

                             
Query: 522  NSPHFCLLWSPLLPSKP 472
            +SPHF L WSP   SKP
Sbjct: 2685 SSPHFALGWSPPHVSKP 2635


>NCR_G_C2.423 Ncr_G_C2.423
          Length = 97362

 Score = 28.6 bits (56), Expect = 7.3
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1 / -1

                                          
Query: 220   PLPVRSSGPLRLVSSPNTYCGFKIEAYQL 306
             PL VR + P+R    P   CG  ++A+QL
Sbjct: 27417 PLRVRPAHPVRCPLHPGYTCGQHLQAHQL 27331


>NCR_G_C2.714 Ncr_G_C2.714
          Length = 49289

 Score = 24.0 bits (46), Expect(2) = 8.0
 Identities = 10/18 (55%), Positives = 11/18 (60%)
 Frame = -3 / +2

                               
Query: 84    CLVPNSCSPGDPLVLERP 31
             CL+ N   P  PLVL RP
Sbjct: 10904 CLLSNLALPMPPLVLFRP 10957


 Score = 22.1 bits (42), Expect(2) = 8.0
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1 / +3

                      
Query: 134   RRGFWCK*R 108
             R+G WCK*R
Sbjct: 10788 RQGVWCK*R 10814


>NCR_G_C2.125 Ncr_G_C2.125
          Length = 138790

 Score = 25.3 bits (49), Expect(2) = 9.2
 Identities = 10/17 (58%), Positives = 11/17 (63%)
 Frame = +3 / +2

                              
Query: 531   HNYRALATVLQRHLASP 581
             H+YRAL   LQR   SP
Sbjct: 61070 HSYRALIVYLQRAATSP 61120


 Score = 20.3 bits (38), Expect(2) = 9.2
 Identities = 7/16 (43%), Positives = 10/16 (61%)
 Frame = +3 / +2

                             
Query: 366   VYPD*EVFPLNPSWKI 413
             V+PD   F  + SWK+
Sbjct: 60998 VHPDLHPFLTHQSWKV 61045


  Database: /phillip/Ncr/Ncr_G
    Posted date:  Jan 24, 2002  1:55 PM
  Number of letters in database: 37,969,317
  Number of sequences in database:  995
  
Lambda     K      H
   0.318    0.135    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 63591685
Number of Sequences: 995
Number of extensions: 936345
Number of successful extensions: 50491
Number of sequences better than 10.0: 31
length of query: 252
length of database: 12,656,439
effective HSP length: 47
effective length of query: 205
effective length of database: 12,609,674
effective search space: 2584983170
effective search space used: 2584983170
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 55 (28.1 bits)