TBLASTX 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCPvsNca/blast/Fgr-C_0_E04_T3.seq
         (715 letters)

Database: /phillip/Ncr/Ncr_G
           995 sequences; 37,969,317 total letters

Searching....................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

NCR_G_C2.009 Ncr_G_C2.009                                              31  1.0
NCR_G_C2.597 Ncr_G_C2.597                                              31  1.4
NCR_G_C2.786 Ncr_G_C2.786                                              30  2.6
NCR_G_C2.659 Ncr_G_C2.659                                              30  2.6
NCR_G_C2.775 Ncr_G_C2.775                                              29  3.6
NCR_G_C2.085 Ncr_G_C2.085                                              29  3.6
NCR_G_C2.397 Ncr_G_C2.397                                              29  3.6
NCR_G_C2.060 Ncr_G_C2.060                                              29  3.6
NCR_G_C2.026 Ncr_G_C2.026                                              29  3.6
NCR_G_C2.525 Ncr_G_C2.525                                              29  3.6
NCR_G_C2.329 Ncr_G_C2.329                                              29  3.6
NCR_G_C2.022_3 Ncr_G_C2.022_3.seq Continuation (3 of 6) of Ncr_G...    29  4.9
NCR_G_C2.358 Ncr_G_C2.358                                              29  4.9
NCR_G_C2.208 Ncr_G_C2.208                                              28  6.2
NCR_G_C2.220 Ncr_G_C2.220                                              29  6.8
NCR_G_C2.519 Ncr_G_C2.519                                              29  6.8
NCR_G_C2.448 Ncr_G_C2.448                                              29  6.8
NCR_G_C2.244 Ncr_G_C2.244                                              29  6.8
NCR_G_C2.727 Ncr_G_C2.727                                              29  6.8
NCR_G_C2.523 Ncr_G_C2.523                                              29  6.8
NCR_G_C2.339 Ncr_G_C2.339                                              29  6.8
NCR_G_C2.201 Ncr_G_C2.201                                              28  9.3
NCR_G_C2.218 Ncr_G_C2.218                                              28  9.3
NCR_G_C2.125 Ncr_G_C2.125                                              28  9.3
NCR_G_C2.668 Ncr_G_C2.668                                              28  9.3

>NCR_G_C2.009 Ncr_G_C2.009
          Length = 16452

 Score = 31.3 bits (62), Expect = 1.0
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2 / +1

                                
Query: 90    VPRAPFLQSRGNPTSY*RR 34
             VPR PFL++RG P S  RR
Sbjct: 13978 VPRGPFLRTRGGPASQFRR 14034


>NCR_G_C2.597 Ncr_G_C2.597
          Length = 14233

 Score = 30.8 bits (61), Expect = 1.4
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -1 / -2

                                    
Query: 148  SHCEDCLVVGRKCLKGCYSSSSCP 77
            S C       R+C KGC SS SCP
Sbjct: 7416 SVCSWVCTPSRECRKGCISSHSCP 7345


>NCR_G_C2.786 Ncr_G_C2.786
          Length = 32873

 Score = 29.9 bits (59), Expect = 2.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3 / +3

                                 
Query: 365   YPSAYPNHIMISTPPFIAPS 306
             +P A P +  IS PPF  PS
Sbjct: 12204 FPLAIPEYANISAPPFFTPS 12263


>NCR_G_C2.659 Ncr_G_C2.659
          Length = 33499

 Score = 29.9 bits (59), Expect = 2.6
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -3 / +1

                                  
Query: 365   YPSAYPNHIMISTPPFIAPSV 303
             YP  +P H++ S PPF  PS+
Sbjct: 31678 YPPIHPMHLLPSLPPFNQPSL 31740


>NCR_G_C2.775 Ncr_G_C2.775
          Length = 60236

 Score = 29.5 bits (58), Expect = 3.6
 Identities = 13/38 (34%), Positives = 19/38 (49%)
 Frame = -3 / +2

                                                  
Query: 368  IYPSAYPNHIMISTPPFIAPSVIRRQRMYLDPSLGLER 255
            + P A+P+H M  TPP I P  + ++      S G  R
Sbjct: 6986 LLPDAHPHHSMHRTPPHIRPRPLIKRLASWTHSHGFHR 7099


>NCR_G_C2.085 Ncr_G_C2.085
          Length = 47946

 Score = 29.5 bits (58), Expect = 3.6
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +1 / -1

                                    
Query: 4     SRGPPPRLAGPSLVTSWIPPGLQ 72
             SRGP PRL  P     W PP L+
Sbjct: 34473 SRGPRPRLWRPGRQDPWQPPRLE 34405


>NCR_G_C2.397 Ncr_G_C2.397
          Length = 35425

 Score = 29.5 bits (58), Expect = 3.6
 Identities = 11/24 (45%), Positives = 15/24 (61%)
 Frame = -1 / +2

                                     
Query: 130   LVVGRKCLKGCYSSSSCPIPAVPG 59
             LV+GR   KG   + +CP  A+PG
Sbjct: 14600 LVLGRAAAKGNLQNPTCPDKAIPG 14671


>NCR_G_C2.060 Ncr_G_C2.060
          Length = 14698

 Score = 29.5 bits (58), Expect = 3.6
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1 / -1

                                  
Query: 610  SPLLRNVTSTEKGKNPLLGQWP 675
            SP +    +TE+GK PL+  WP
Sbjct: 8722 SPWISGCLATERGKVPLIAVWP 8657


>NCR_G_C2.026 Ncr_G_C2.026
          Length = 16958

 Score = 29.5 bits (58), Expect = 3.6
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1 / +2

                                
Query: 4    SRGPPPRLAGPSLVTSWIPP 63
            +R P PR++ PS   SW+PP
Sbjct: 9272 TRPPTPRVSRPS*PPSWVPP 9331


>NCR_G_C2.525 Ncr_G_C2.525
          Length = 20618

 Score = 29.5 bits (58), Expect = 3.6
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1 / -1

                                 
Query: 31   GPSLVTSWIPPGLQEWGTRNY 93
            G S V SW+P G++ W T  Y
Sbjct: 4253 GASKVLSWMPRGVEVWTTTTY 4191


>NCR_G_C2.329 Ncr_G_C2.329
          Length = 53959

 Score = 29.5 bits (58), Expect = 3.6
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -1 / -2

                                       
Query: 112   CLKGCYSSSSCPIPAVPGESN*LLET 35
             C+K   S+SS P+P+VP  +N*  +T
Sbjct: 18027 CVKMMQSTSSIPLPSVPWLTN*FSDT 17950


>NCR_G_C2.022_3 Ncr_G_C2.022_3.seq Continuation (3 of 6) of Ncr_G_C2.022
             from base 200001
          Length = 110000

 Score = 29.0 bits (57), Expect = 4.9
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +1 / +3

                                 
Query: 70    QEWGTRNYYNTLLNTSFPPP 129
             Q W T+ + NT  NTSFP P
Sbjct: 47127 QLWSTKCHSNTFSNTSFPFP 47186


>NCR_G_C2.358 Ncr_G_C2.358
          Length = 98362

 Score = 29.0 bits (57), Expect = 4.9
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -1 / -2

                                 
Query: 646   PFPLKSRSLIGGSCSKLEQH 587
             PFP +SR L+ G CS L ++
Sbjct: 10689 PFPHRSRKLLSGVCSSLPEN 10630


>NCR_G_C2.208 Ncr_G_C2.208
          Length = 202230

 Score = 28.1 bits (55), Expect = 9.3
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1 / -3

                                     
Query: 142    CEDCLVVGRKCLKGCYSSSSCPI 74
              C+DC+V+GR   K  Y     PI
Sbjct: 156790 CQDCIVLGRHLSKHHYQHREIPI 156722


 Score = 24.9 bits (48), Expect(2) = 6.2
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -3 / +1

                         
Query: 383   LNL*PIYPSAYP 348
             +++ PIYPSAYP
Sbjct: 73930 ISIPPIYPSAYP 73965


 Score = 21.2 bits (40), Expect(2) = 6.2
 Identities = 10/21 (47%), Positives = 11/21 (51%)
 Frame = -3 / +1

                                  
Query: 365   YPSAYPNHIMISTPPFIAPSV 303
             YP AYP     + PP   PSV
Sbjct: 73960 YPPAYPPAYSPA*PPM**PSV 74022


>NCR_G_C2.220 Ncr_G_C2.220
          Length = 142147

 Score = 28.6 bits (56), Expect = 6.8
 Identities = 10/24 (41%), Positives = 15/24 (61%)
 Frame = -3 / -3

                                      
Query: 371    PIYPSAYPNHIMISTPPFIAPSVI 300
              P +PS  P+HI+ S PP +   +I
Sbjct: 130685 PPFPSLLPHHILPSNPPLLRILII 130614


>NCR_G_C2.519 Ncr_G_C2.519
          Length = 168333

 Score = 28.6 bits (56), Expect = 6.8
 Identities = 9/22 (40%), Positives = 12/22 (53%)
 Frame = +1 / +3

                                   
Query: 73    EWGTRNYYNTLLNTSFPPPNNL 138
             +WG R   N  +    PPP+NL
Sbjct: 20019 DWGERTVVNRSITPQHPPPSNL 20084


>NCR_G_C2.448 Ncr_G_C2.448
          Length = 102021

 Score = 28.6 bits (56), Expect = 6.8
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +1 / +3

                                                   
Query: 586   SVVPIWNKSPLLRNVTSTEKGKNPLLGQWPITEPSP*C 699
             S V + + SPL    T+   G  P L  WP +   P C
Sbjct: 16296 SYVGLPSPSPLSAGTTTISTGTMPFLSAWPFSWVLPVC 16409


>NCR_G_C2.244 Ncr_G_C2.244
          Length = 3629

 Score = 28.6 bits (56), Expect = 6.8
 Identities = 14/32 (43%), Positives = 18/32 (55%)
 Frame = +3 / +3

                                            
Query: 618  IKERDFNGKGQKPFIRAMAHYGTIPLMQFFGG 713
            I + DF  KG  P+I  +A Y    L+QF GG
Sbjct: 2685 IYKYDFYNKGLIPYIITIAPYWHRVLLQFSGG 2780


>NCR_G_C2.727 Ncr_G_C2.727
          Length = 67009

 Score = 28.6 bits (56), Expect = 6.8
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -1 / +2

                          
Query: 112   CLKGCYSSSSCPI 74
             CL  C+SSSSCP+
Sbjct: 20306 CLSTCWSSSSCPL 20344


>NCR_G_C2.523 Ncr_G_C2.523
          Length = 130581

 Score = 28.6 bits (56), Expect = 6.8
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +1 / -2

                                      
Query: 613   PLLRNVTSTEKGKNPLLGQWPITEP 687
             PL+R + S+   K  LLG  P++EP
Sbjct: 33896 PLIR*LISSPTAKTNLLGMMPVSEP 33822


>NCR_G_C2.339 Ncr_G_C2.339
          Length = 67925

 Score = 28.6 bits (56), Expect = 6.8
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +1 / -3

                                        
Query: 10    GPPPRLAGPSLVTSWIPPGLQEWGTRN 90
             GP P LA PS V +W+P       TR+
Sbjct: 50277 GPIPSLALPSWVFTWLPCTAFPLRTRS 50197


>NCR_G_C2.201 Ncr_G_C2.201
          Length = 19963

 Score = 28.1 bits (55), Expect = 9.3
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -2 / -3

                         
Query: 39   RRTCQPRWRSTTF 1
            R TC PRWR T F
Sbjct: 5717 RMTCAPRWRMTAF 5679


>NCR_G_C2.218 Ncr_G_C2.218
          Length = 129490

 Score = 28.1 bits (55), Expect = 9.3
 Identities = 9/21 (42%), Positives = 14/21 (65%)
 Frame = -3 / +2

                                  
Query: 371   PIYPSAYPNHIMISTPPFIAP 309
             P++P++ P+H    TPP  AP
Sbjct: 96410 PVHPASRPSHPSSQTPPSSAP 96472


>NCR_G_C2.125 Ncr_G_C2.125
          Length = 138790

 Score = 28.1 bits (55), Expect = 9.3
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = +2 / +3

                                                 
Query: 467   PLISC*NSQ*IFAKSAHFLTNRPNSAKSLINQRNSP 574
             PLIS   S   F ++  FLT RP S KS+ +   SP
Sbjct: 68193 PLISTRPSAHDFPRNPVFLTARPTSQKSVTDFHLSP 68300


>NCR_G_C2.668 Ncr_G_C2.668
          Length = 78107

 Score = 28.1 bits (55), Expect = 9.3
 Identities = 11/19 (57%), Positives = 14/19 (72%)
 Frame = -3 / +1

                               
Query: 362  PSAYPNHIMISTPPFIAPS 306
            PS+ P+H+MIST P I  S
Sbjct: 5800 PSSSPHHLMISTHPSITHS 5856


  Database: /phillip/Ncr/Ncr_G
    Posted date:  Jan 24, 2002  1:55 PM
  Number of letters in database: 37,969,317
  Number of sequences in database:  995
  
Lambda     K      H
   0.318    0.135    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 65666354
Number of Sequences: 995
Number of extensions: 924896
Number of successful extensions: 48884
Number of sequences better than 10.0: 25
length of query: 238
length of database: 12,656,439
effective HSP length: 47
effective length of query: 190
effective length of database: 12,609,674
effective search space: 2395838060
effective search space used: 2395838060
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 55 (28.1 bits)