TBLASTX 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCPvsNca/blast/Fgr_7_A18_T3.seq
         (894 letters)

Database: /phillip/Ncr/Ncr_G
           995 sequences; 37,969,317 total letters

Searching....................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

NCR_G_C2.006 Ncr_G_C2.006                                              90  7e-22
NCR_G_C2.521 Ncr_G_C2.521                                              31  1.3
NCR_G_C2.663 Ncr_G_C2.663                                              31  1.8
NCR_G_C2.336 Ncr_G_C2.336                                              30  2.5
NCR_G_C2.204 Ncr_G_C2.204                                              30  3.4
NCR_G_C2.214 Ncr_G_C2.214                                              30  3.4
NCR_G_C2.027 Ncr_G_C2.027                                              30  3.4
NCR_G_C2.746 Ncr_G_C2.746                                              29  4.7
NCR_G_C2.536 Ncr_G_C2.536                                              29  4.7
NCR_G_C2.042_4 Ncr_G_C2.042_4.seq Continuation (4 of 6) of Ncr_G...    29  6.5
NCR_G_C2.110 Ncr_G_C2.110                                              28  6.5
NCR_G_C2.524 Ncr_G_C2.524                                              26  7.8
NCR_G_C2.846 Ncr_G_C2.846                                              29  8.9
NCR_G_C2.307 Ncr_G_C2.307                                              29  8.9

>NCR_G_C2.006 Ncr_G_C2.006
          Length = 19790

 Score = 90.4 bits (191), Expect(2) = 7e-22
 Identities = 40/60 (66%), Positives = 47/60 (77%)
 Frame = +2 / +3

                                                                         
Query: 77    TRTTFKMKHLAAYXXXXXXXNTSPSAADVKAVLTSVGIDADEDRLNKLISELEGKDIQQL 256
             T  T KMKHLAAY       NT+PSAADVKAVL SVGI+AD +RL+KLISELEGKD+ ++
Sbjct: 10470 TFKTDKMKHLAAYLLLTLGGNTAPSAADVKAVLESVGIEADSERLDKLISELEGKDLNEV 10649


 Score = 51.0 bits (105), Expect = 2e-06
 Identities = 28/66 (42%), Positives = 39/66 (58%)
 Frame = -3 / -1

                                                                         
Query: 283   SELLGTLSDELLDVLALELRDKLVQAVLVSVNTXXXXXXXXXXXXXXGVASEAEKKVSCE 104
             S LL      L++VLALELR++LV+A+ V +N               GVA+E E++VS +
Sbjct: 10676 SSLLSGQ*SYLVEVLALELRNELVKALGVGLNANGLKDGLDISGRGGGVATEGEEEVSGQ 10497

                   
Query: 103   VLHFEC 86
             VLHF C
Sbjct: 10496 VLHFVC 10479


 Score = 45.0 bits (92), Expect(2) = 4e-08
 Identities = 24/56 (42%), Positives = 29/56 (50%)
 Frame = -1 / -2

                                                                     
Query: 243   SLPXXXXXXXXXXXXXXSIPTEVRTALTSAAEGEVLXXXXXXXXXXRCFILNVVLV 76
             SLP              S+PT+ RTALTSAAEG VL          +CFIL+V+ V
Sbjct: 10636 SLPSSSEMSLSRRSESASMPTDSRTALTSAAEGAVLPPRVRRR*AAKCFILSVLKV 10469


 Score = 34.1 bits (68), Expect = 0.20
 Identities = 17/31 (54%), Positives = 20/31 (63%)
 Frame = +1 / +2

                                            
Query: 151   CRRCQGRPYLSRY*R*RGPPEQAYL*ARGQG 243
             CR CQGRP +  +*     P QA+ *ARGQG
Sbjct: 10544 CR*CQGRP*VRWH*GRLRAP*QAHF*ARGQG 10636


 Score = 32.2 bits (64), Expect(2) = 7e-22
 Identities = 14/17 (82%), Positives = 15/17 (87%)
 Frame = +2 / +3

                              
Query: 242   DIQQLIAEGSEKLASVP 292
             +I QLIAEGS KLASVP
Sbjct: 10701 EILQLIAEGSSKLASVP 10751


 Score = 31.3 bits (62), Expect = 1.3
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +3 / +2

                           
Query: 393   TRIWASVSSTKRSL 434
             TRIWASVSSTKR L
Sbjct: 10913 TRIWASVSSTKRLL 10954


 Score = 30.8 bits (61), Expect(2) = 4e-08
 Identities = 12/18 (66%), Positives = 15/18 (82%)
 Frame = -1 / -2

                               
Query: 294   EGTEASFSEPSAMSCWMS 241
             EGTEAS  EPSA++C +S
Sbjct: 10753 EGTEASLEEPSAINCNIS 10700


 Score = 30.8 bits (61), Expect = 1.8
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = +2 / +1

                         
Query: 392   DEDMGFGLFD*A 427
             DEDMGFGLFD*A
Sbjct: 10912 DEDMGFGLFD*A 10947


 Score = 30.4 bits (60), Expect = 2.5
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = -3 / -3

                           
Query: 433   RDRLVEETEAHILV 392
             R RLVEETEAHILV
Sbjct: 10953 RRRLVEETEAHILV 10912


 Score = 30.4 bits (60), Expect(2) = 0.042
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -2 / -3

                               
Query: 242   PCPRAQR*ACSGGPRQRQ 189
             PCPRAQ+*AC G   + Q
Sbjct: 10635 PCPRAQK*ACQGARSRPQ 10582


 Score = 24.4 bits (47), Expect(2) = 0.042
 Identities = 10/13 (76%), Positives = 12/13 (91%)
 Frame = -3 / -1

                          
Query: 289   NGSELLGTLSDEL 251
             +GSEL GTLSD+L
Sbjct: 10748 DGSELGGTLSDQL 10710


>NCR_G_C2.521 Ncr_G_C2.521
          Length = 150662

 Score = 31.3 bits (62), Expect = 1.3
 Identities = 15/52 (28%), Positives = 26/52 (49%)
 Frame = +3 / -2

                                                                 
Query: 399   IWASVSSTKRSLSRDSQSNDTSRISKMLRTGCSPVLTRLMRGWIGRSWLDCV 554
             ++ ++ S K + +  ++S   SR   ML TGC  V  R    W+G   + C+
Sbjct: 98977 LYLAIESMKVARAFSTRSKRVSRYLSML*TGCLEVQRRRFALWLGDRGVVCL 98822


>NCR_G_C2.663 Ncr_G_C2.663
          Length = 35951

 Score = 30.8 bits (61), Expect = 1.8
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = +2 / -3

                        
Query: 392  DEDMGFGLFD*A 427
            DEDMGFGLFD*A
Sbjct: 1719 DEDMGFGLFD*A 1684


 Score = 30.4 bits (60), Expect = 2.5
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = +3 / -1

                        
Query: 393  TRIWASVSSTKR 428
            TRIWASVSSTKR
Sbjct: 1718 TRIWASVSSTKR 1683


 Score = 29.0 bits (57), Expect = 6.5
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = -3 / +1

                        
Query: 427  RLVEETEAHILV 392
            RLVEETEAHILV
Sbjct: 1684 RLVEETEAHILV 1719


>NCR_G_C2.336 Ncr_G_C2.336
          Length = 27241

 Score = 30.4 bits (60), Expect = 2.5
 Identities = 12/28 (42%), Positives = 14/28 (49%)
 Frame = +3 / -1

                                         
Query: 459   TSRISKMLRTGCSPVLTRLMRGWIGRSW 542
             T R S  +R GC     R+ R W GR W
Sbjct: 26221 TGRTSPSMRWGCWAWRRRIWRRWSGRRW 26138


>NCR_G_C2.204 Ncr_G_C2.204
          Length = 73435

 Score = 29.9 bits (59), Expect = 3.4
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -3 / -3

                                  
Query: 553   TQSSHDRPIHPRIRRVRTGEQ 491
             T  +H RP+  R RR RT EQ
Sbjct: 20672 TSPTHHRPLRRRHRRSRTTEQ 20610


>NCR_G_C2.214 Ncr_G_C2.214
          Length = 116813

 Score = 29.9 bits (59), Expect = 3.4
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = +3 / -1

                                                           
Query: 402   WASVSSTKRSLSRDSQSNDTSRISKMLRTGCSPVLTRLMRGWIGRS 539
             W   +ST R  S  S +    RIS+ +   C  + T++   W G S
Sbjct: 56630 WICSTST*RKRSSSSSAKQAVRISRAVALVCFRLGTKMRADWSGES 56493


>NCR_G_C2.027 Ncr_G_C2.027
          Length = 84885

 Score = 29.9 bits (59), Expect = 3.4
 Identities = 17/50 (34%), Positives = 21/50 (42%)
 Frame = -3 / +1

                                                               
Query: 607   NRLFFLISITVCYPFLRETQSSHDRPIHPRIRRVRTGEQPVRSIFEIREV 458
             N ++   SI  C  F+    SSH  PI         G QPV  I E R +
Sbjct: 28666 NLVYLRTSIVRCESFINLQGSSHFTPIPVHGGH*TVGLQPVEDISEARSI 28815


>NCR_G_C2.746 Ncr_G_C2.746
          Length = 30246

 Score = 29.5 bits (58), Expect = 4.7
 Identities = 14/39 (35%), Positives = 19/39 (47%)
 Frame = -3 / +1

                                                   
Query: 613  EPNRLFFLISITVCYPFLRETQSSHDRPIHPRIRRVRTG 497
            EP+R+  L   TVC+   R+T    DR     +RR   G
Sbjct: 8332 EPHRIHALFPTTVCHSQNRDTSGPWDRQARRWLRRSFVG 8448


>NCR_G_C2.536 Ncr_G_C2.536
          Length = 18769

 Score = 29.5 bits (58), Expect = 4.7
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = -3 / +2

                           
Query: 535  RPIHPRIRRVRTGEQ 491
            RP+HPR RR+R G+Q
Sbjct: 3242 RPLHPRERRLRQGKQ 3286


>NCR_G_C2.042_4 Ncr_G_C2.042_4.seq Continuation (4 of 6) of Ncr_G_C2.042
             from base 300001
          Length = 110000

 Score = 29.0 bits (57), Expect = 6.5
 Identities = 9/21 (42%), Positives = 16/21 (75%)
 Frame = -3 / -2

                                  
Query: 592   LISITVCYPFLRETQSSHDRP 530
             ++S   CYP+LR+TQ + ++P
Sbjct: 72994 IVSEICCYPYLRKTQLTMNKP 72932


>NCR_G_C2.110 Ncr_G_C2.110
          Length = 102633

 Score = 28.1 bits (55), Expect(2) = 6.5
 Identities = 10/21 (47%), Positives = 12/21 (56%)
 Frame = +1 / +3

                                  
Query: 523   DGLAGHGWIVFL*GRDNIRLW 585
             D ++GHGWI  L      RLW
Sbjct: 82233 DNVSGHGWICILFAGAFFRLW 82295


 Score = 18.5 bits (34), Expect(2) = 6.5
 Identities = 7/24 (29%), Positives = 11/24 (45%)
 Frame = +3 / +1

                                     
Query: 399   IWASVSSTKRSLSRDSQSNDTSRI 470
             +W S  + KRS+        T R+
Sbjct: 82177 LWRSNITMKRSIKTSMSCRTTYRV 82248


>NCR_G_C2.524 Ncr_G_C2.524
          Length = 22852

 Score = 26.3 bits (51), Expect(2) = 7.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3 / +3

                            
Query: 498  PVLTRLMRGWIGRSWL 545
            P  TR  R W+GR W+
Sbjct: 9414 PTSTRYCRWWMGRRWI 9461


 Score = 20.3 bits (38), Expect(2) = 7.8
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +1 / +2

                     
Query: 541  GWIVFL*GR 567
            GW+VF+ GR
Sbjct: 9473 GWVVFVDGR 9499


>NCR_G_C2.846 Ncr_G_C2.846
          Length = 2314

 Score = 28.6 bits (56), Expect = 8.9
 Identities = 13/28 (46%), Positives = 14/28 (49%)
 Frame = -2 / -2

                                        
Query: 281  RASRNPQR*AAGCPCPRAQR*ACSGGPR 198
            R  R P+R    CPC  A R AC G  R
Sbjct: 1311 RPRRTPKRSTNCCPCWSASRHACRGRRR 1228


>NCR_G_C2.307 Ncr_G_C2.307
          Length = 85225

 Score = 28.6 bits (56), Expect = 8.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3 / -3

                                  
Query: 571   YPFLRETQSSHDRPIHPRIRR 509
             YPFL  T +    P+HP +RR
Sbjct: 49850 YPFLTTTTTLRTLPLHPPLRR 49788


  Database: /phillip/Ncr/Ncr_G
    Posted date:  Jan 24, 2002  1:55 PM
  Number of letters in database: 37,969,317
  Number of sequences in database:  995
  
Lambda     K      H
   0.318    0.135    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 38888553
Number of Sequences: 995
Number of extensions: 411689
Number of successful extensions: 28124
Number of sequences better than 10.0: 14
length of query: 298
length of database: 12,656,439
effective HSP length: 47
effective length of query: 250
effective length of database: 12,609,674
effective search space: 3152418500
effective search space used: 3152418500
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 56 (28.6 bits)