TBLASTX 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCPvsSce/blast/0941_A01_A01ZS5.seq
         (912 letters)

Database: /home/pmiguel/yeast/yeast
           122 sequences; 13,206,306 total letters

Searching............................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

GI-14270686_5 gi-14270686_5.seq Continuation (5 of 9) of gi-1427...    33  0.22
GI-14389432_09 gi-14389432_09.seq Continuation (9 of 11) of gi-1...    27  0.24
GI-14389432_08 gi-14389432_08.seq Continuation (8 of 11) of gi-1...    27  0.24
GI-6322016_3 gi-6322016_3.seq Continuation (3 of 5) of gi-632201...    29  3.8
GI-14318439_09 gi-14318439_09.seq Continuation (9 of 11) of gi-1...    28  4.4
GI-14318439_05 gi-14318439_05.seq Continuation (5 of 11) of gi-1...    28  4.4
GI-14389432_11 gi-14389432_11.seq Continuation (11 of 11) of gi-...    27  9.7
GI-14627172_4 gi-14627172_4.seq Continuation (4 of 8) of gi-1462...    27  9.7

>GI-14270686_5 gi-14270686_5.seq Continuation (5 of 9) of gi-14270686
             from base 400001
          Length = 110000

 Score = 32.7 bits (65), Expect = 0.22
 Identities = 15/34 (44%), Positives = 15/34 (44%)
 Frame = -1 / -2

                                               
Query: 378   AGDPGRGRKKGKQPPAPEGHAPAQRRAEGARTKP 277
             A  PGRG   G  P A  GH   Q RA   R  P
Sbjct: 90679 ASAPGRGSPLGPHPQADRGHPAGQVRAGALRGAP 90578


>GI-14389432_09 gi-14389432_09.seq Continuation (9 of 11) of
            gi-14389432 from base 800001
          Length = 110000

 Score = 26.7 bits (52), Expect(2) = 0.24
 Identities = 14/50 (28%), Positives = 19/50 (38%)
 Frame = -1 / -3

                                                              
Query: 279  PAIPPPPAHGRETKKKSDSREQVILAPASTPNARATCDDDRAEEARPPIL 130
            P  PPPP  G  +   + S   + LAP   P   +      +    PP L
Sbjct: 3915 PPPPPPPPPGAFSTSSALSASSIPLAPLPPPPPPSVATSVPSAPPPPPTL 3766


 Score = 24.0 bits (46), Expect(2) = 0.24
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = -1 / -3

                                       
Query: 339  PPAPEGHAPAQRRAEGARTKPAIPPPP 259
            PP P   +    +A      P  PPPP
Sbjct: 3972 PPLPNTTSVPPNKASSMPAPPPPPPPP 3892


>GI-14389432_08 gi-14389432_08.seq Continuation (8 of 11) of gi-14389432
              from base 700001
          Length = 110000

 Score = 26.7 bits (52), Expect(2) = 0.24
 Identities = 14/50 (28%), Positives = 19/50 (38%)
 Frame = -1 / -2

                                                                
Query: 279    PAIPPPPAHGRETKKKSDSREQVILAPASTPNARATCDDDRAEEARPPIL 130
              P  PPPP  G  +   + S   + LAP   P   +      +    PP L
Sbjct: 103915 PPPPPPPPPGAFSTSSALSASSIPLAPLPPPPPPSVATSVPSAPPPPPTL 103766


 Score = 24.0 bits (46), Expect(2) = 0.24
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = -1 / -2

                                         
Query: 339    PPAPEGHAPAQRRAEGARTKPAIPPPP 259
              PP P   +    +A      P  PPPP
Sbjct: 103972 PPLPNTTSVPPNKASSMPAPPPPPPPP 103892


>GI-6322016_3 gi-6322016_3.seq Continuation (3 of 5) of gi-6322016 from
             base 200001
          Length = 110000

 Score = 28.6 bits (56), Expect = 3.8
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = -1 / -3

                                                      
Query: 339   PPAPEGHAPAQRRAEGARTKPAIPPPPAHGRETKKKSDSRE 217
             P   + H  AQ   +  R K + PP P H    ++ S S E
Sbjct: 91344 PHEQDTHQQAQEEQQHTREKTSTPPLPMHFNAQRRTSVSGE 91222


>GI-14318439_09 gi-14318439_09.seq Continuation (9 of 11) of gi-14318439
             from base 800001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.4
 Identities = 9/22 (40%), Positives = 13/22 (58%)
 Frame = +2 / +1

                                   
Query: 281   FVLAPSALLWAGACPSGAGGCF 346
             +++  S L WA  CP  +G CF
Sbjct: 49009 YIIIVSELYWANKCPVLSGQCF 49074


>GI-14318439_05 gi-14318439_05.seq Continuation (5 of 11) of gi-14318439
             from base 400001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.4
 Identities = 12/39 (30%), Positives = 20/39 (50%)
 Frame = +2 / +3

                                                    
Query: 209   ITCSLLSDFFFVSRPCAGGGGMAGFVLAPSALLWAGACP 325
             + C+L+  F     P   G G++ FV+  S L+W+   P
Sbjct: 63081 VICALMLAFLSSQSPSTIGHGLSIFVVNISTLVWSEKWP 63197


>GI-14389432_11 gi-14389432_11.seq Continuation (11 of 11) of
             gi-14389432 from base 1000001
          Length = 78173

 Score = 27.2 bits (53), Expect = 9.7
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1 / -2

                                
Query: 279   PAIPPPPAHGRETKKKSDS 223
             PA P PP   RET+K+ ++
Sbjct: 55906 PACPTPPYRSRETEKEDET 55850


>GI-14627172_4 gi-14627172_4.seq Continuation (4 of 8) of gi-14627172
             from base 300001
          Length = 110000

 Score = 27.2 bits (53), Expect = 9.7
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1 / +2

                           
Query: 288   RTKPAIPPPPAHGR 247
             RT    PPPP+HGR
Sbjct: 61322 RTSSPPPPPPSHGR 61363


  Database: /home/pmiguel/yeast/yeast
    Posted date:  Oct 27, 2001  2:26 PM
  Number of letters in database: 13,206,306
  Number of sequences in database:  122
  
Lambda     K      H
   0.318    0.135    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 11571646
Number of Sequences: 122
Number of extensions: 84428
Number of successful extensions: 7110
Number of sequences better than 10.0: 8
length of query: 304
length of database: 4,402,102
effective HSP length: 44
effective length of query: 259
effective length of database: 4,396,734
effective search space: 1138754106
effective search space used: 1138754106
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 53 (27.2 bits)