TBLASTX 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCPvsSce/blast/0941_A03_A05ZS5.seq
         (927 letters)

Database: /home/pmiguel/yeast/yeast
           122 sequences; 13,206,306 total letters

Searching............................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

GI-6323501_05 gi-6323501_05.seq Continuation (5 of 10) of gi-632...    42  3e-04
GI-6322016_3 gi-6322016_3.seq Continuation (3 of 5) of gi-632201...    35  0.038
GI-14277709_2 gi-14277709_2.seq Continuation (2 of 7) of gi-1427...    33  0.19
GI-6323989_2 gi-6323989_2.seq Continuation (2 of 8) of gi-632398...    32  0.35
GI-6862570_3 gi-6862570_3.seq Continuation (3 of 6) of gi-686257...    31  0.49
GI-7276232_5 gi-7276232_5.seq Continuation (5 of 6) of gi-727623...    30  0.92
GI-14318434_07 gi-14318434_07.seq Continuation (7 of 11) of gi-1...    30  1.3
GI-14318434_03 gi-14318434_03.seq Continuation (3 of 11) of gi-1...    29  2.4
GI-6323989_7 gi-6323989_7.seq Continuation (7 of 8) of gi-632398...    29  3.3
GI-14389432_05 gi-14389432_05.seq Continuation (5 of 11) of gi-1...    29  3.3
GI-14318434_06 gi-14318434_06.seq Continuation (6 of 11) of gi-1...    29  3.3
GI-14318434_11 gi-14318434_11.seq Continuation (11 of 11) of gi-...    26  4.2
GI-14318439_11 gi-14318439_11.seq Continuation (11 of 11) of gi-...    28  4.5
GI-6324971_07 gi-6324971_07.seq Continuation (7 of 10) of gi-632...    28  4.5
GI-6324971_04 gi-6324971_04.seq Continuation (4 of 10) of gi-632...    28  4.5
GI-6323501_09 gi-6323501_09.seq Continuation (9 of 10) of gi-632...    28  4.5
GI-6323501_08 gi-6323501_08.seq Continuation (8 of 10) of gi-632...    28  4.5
GI-6323501_02 gi-6323501_02.seq Continuation (2 of 10) of gi-632...    28  4.5
GI-14318439_07 gi-14318439_07.seq Continuation (7 of 11) of gi-1...    28  4.5
GI-14318439_05 gi-14318439_05.seq Continuation (5 of 11) of gi-1...    28  4.5
GI-14318434_08 gi-14318434_08.seq Continuation (8 of 11) of gi-1...    28  4.5
GI-14270686_2 gi-14270686_2.seq Continuation (2 of 9) of gi-1427...    25  5.4
GI-10383748 gi|10383748|ref|NC_001135.2| Saccharomyces cerevisia...    28  5.9
GI-6324971_09 gi-6324971_09.seq Continuation (9 of 10) of gi-632...    28  6.2
GI-14627172_1 gi-14627172_1.seq Continuation (1 of 8) of gi-1462...    28  6.2
GI-14270686_7 gi-14270686_7.seq Continuation (7 of 9) of gi-1427...    28  6.2
GI-14270686_6 gi-14270686_6.seq Continuation (6 of 9) of gi-1427...    28  6.2
GI-7839148_06 gi-7839148_06.seq Continuation (6 of 16) of gi-783...    27  8.5
GI-7276232_1 gi-7276232_1.seq Continuation (1 of 6) of gi-727623...    27  8.5
GI-14389432_08 gi-14389432_08.seq Continuation (8 of 11) of gi-1...    27  8.5

>GI-6323501_05 gi-6323501_05.seq Continuation (5 of 10) of gi-6323501
             from base 400001
          Length = 110000

 Score = 41.8 bits (85), Expect = 3e-04
 Identities = 14/36 (38%), Positives = 20/36 (54%)
 Frame = +1 / +2

                                                 
Query: 127   LRLCSHMRCGRKETRRHEFRRCSVCGAANYCSRACQ 234
             +R C++  CG+ E    +F +C  C    YCSR CQ
Sbjct: 67823 VRQCANFSCGKWEDFPRQFAKCRRCKRTKYCSRKCQ 67930


>GI-6322016_3 gi-6322016_3.seq Continuation (3 of 5) of gi-6322016 from
             base 200001
          Length = 110000

 Score = 35.0 bits (70), Expect = 0.038
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = -1 / -2

                                                  
Query: 834   SKDKTQKPQQHASGLRXGTGKEIKRQKNEKTKEEGKK 724
             S  KT+KP    SGL  G+G  I + K E   E  KK
Sbjct: 43348 SDSKTKKPFAFGSGLSFGSGFNILKNKTENNSESEKK 43238


>GI-14277709_2 gi-14277709_2.seq Continuation (2 of 7) of gi-14277709
             from base 100001
          Length = 110000

 Score = 32.7 bits (65), Expect = 0.19
 Identities = 13/57 (22%), Positives = 30/57 (51%)
 Frame = -1 / +3

                                                                      
Query: 897   YES*PGEERETEDLRRSRNRTSKDKTQKPQQHASGLRXGTGKEIKRQKNEKTKEEGK 727
             Y+S    ++E   L++   +  +    + Q+H SG    +G + + ++ E+ +EEG+
Sbjct: 25971 YQSQALSKKEKRKLKKELKKMQEQDATEAQKHMSGDEDESGDDREEEEEEEEEEEGR 26141


>GI-6323989_2 gi-6323989_2.seq Continuation (2 of 8) of gi-6323989 from
             base 100001
          Length = 110000

 Score = 31.8 bits (63), Expect = 0.35
 Identities = 13/29 (44%), Positives = 16/29 (54%)
 Frame = +2 / +2

                                          
Query: 422   D*GSVFLASCFLFLCRLGVPLSCVFLCFI 508
             D G +  + CF F C L    S +FLCFI
Sbjct: 30026 DEGELLFSFCFSFSCALFCCSSTIFLCFI 30112


>GI-6862570_3 gi-6862570_3.seq Continuation (3 of 6) of gi-6862570 from
             base 200001
          Length = 110000

 Score = 31.3 bits (62), Expect = 0.49
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2 / -3

                                              
Query: 485   SCVFLCFIWACSPLWLFSAGRVLLVFCLCLWVG 583
             SC F   I AC+ LW+  + ++L   C C  +G
Sbjct: 44496 SCSFRYVITACNTLWIGKSKQILTCKCFC*GLG 44398


>GI-7276232_5 gi-7276232_5.seq Continuation (5 of 6) of gi-7276232 from
             base 400001
          Length = 110000

 Score = 30.4 bits (60), Expect = 0.92
 Identities = 9/17 (52%), Positives = 12/17 (69%)
 Frame = +2 / +1

                              
Query: 485   SCVFLCFIWACSPLWLF 535
             SC F CFIW  S +++F
Sbjct: 25141 SCAFFCFIWILSNMFIF 25191


 Score = 28.1 bits (55), Expect = 4.5
 Identities = 11/23 (47%), Positives = 12/23 (51%)
 Frame = +2 / +3

                                    
Query: 449   CFLFLCRLGVPLSCVFLCFIWAC 517
             CF FLC     +SCV   F  AC
Sbjct: 83109 CFCFLCNKSRLISCVLRSFSRAC 83177


>GI-14318434_07 gi-14318434_07.seq Continuation (7 of 11) of gi-14318434
             from base 600001
          Length = 110000

 Score = 29.9 bits (59), Expect = 1.3
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -2 / -3

                                         
Query: 497   ERHTTRGHPNGTKKENKTPEKRFLNHHS 414
             + H  R  P   K   KTP ++++N H+
Sbjct: 47160 KHHLLRNPPKKRKNSTKTPHRKYINKHT 47077


>GI-14318434_03 gi-14318434_03.seq Continuation (3 of 11) of gi-14318434
             from base 200001
          Length = 110000

 Score = 29.0 bits (57), Expect = 2.4
 Identities = 12/52 (23%), Positives = 26/52 (49%)
 Frame = -1 / +2

                                                                 
Query: 843   NRTSKDKTQKPQQHASGLRXGTGKEIKRQKNEKTKEEGKKQRTKARGEPNRQ 688
             N+    K +KP +        + ++ K+ +N  ++   KK++ +A  EPN +
Sbjct: 58643 NKKETKKKRKPTEVNDSENNSSEEDKKKGQNVTSETHSKKRKKEANEEPNTE 58798


>GI-6323989_7 gi-6323989_7.seq Continuation (7 of 8) of gi-6323989 from
             base 600001
          Length = 110000

 Score = 28.6 bits (56), Expect = 3.3
 Identities = 10/21 (47%), Positives = 15/21 (70%)
 Frame = -1 / +2

                                  
Query: 765   KRQKNEKTKEEGKKQRTKARG 703
             ++QK +K K++ KKQ T  RG
Sbjct: 42482 QKQKQKKAKKQTKKQTTVDRG 42544


>GI-14389432_05 gi-14389432_05.seq Continuation (5 of 11) of gi-14389432
             from base 400001
          Length = 110000

 Score = 28.6 bits (56), Expect = 3.3
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +1 / +1

                                      
Query: 445   VLFSFFVPFGCPLVVCLSLLYLGVF 519
             + F FF+ F C L++C+ L +L VF
Sbjct: 13078 ISFLFFLCFCCILLICVVLCHLVVF 13152


>GI-14318434_06 gi-14318434_06.seq Continuation (6 of 11) of gi-14318434
             from base 500001
          Length = 110000

 Score = 28.6 bits (56), Expect = 3.3
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3 / +1

                                
Query: 459   FCAVWVSPCRVSFFALFGR 515
             FC+ W+  C +S   LF R
Sbjct: 50371 FCSFWIPTCGISLLTLFSR 50427


>GI-14318434_11 gi-14318434_11.seq Continuation (11 of 11) of
             gi-14318434 from base 1000001
          Length = 90937

 Score = 25.8 bits (50), Expect(2) = 4.2
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3 / +2

                                
Query: 417   MMIEEAFFWRLVFFFCAVW 473
             M +   F   +VFF CAVW
Sbjct: 13550 MTVPIYFLTAIVFFICAVW 13606


 Score = 19.8 bits (37), Expect(2) = 4.2
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +2 / +2

                                
Query: 473   GVPLSCVFLCFIWACSPLW 529
             GV + C+ +    AC+ LW
Sbjct: 13715 GVYILCMGIYVNAACNCLW 13771


>GI-14318439_11 gi-14318439_11.seq Continuation (11 of 11) of
             gi-14318439 from base 1000001
          Length = 91284

 Score = 28.1 bits (55), Expect = 4.5
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = +3 / -3

                                 
Query: 270   ACPWTAGSWAAPPPRRSGDP 329
             A  W AG W A P RR   P
Sbjct: 52078 ASKWLAGKWCAKPMRRLAPP 52019


>GI-6324971_07 gi-6324971_07.seq Continuation (7 of 10) of gi-6324971
             from base 600001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2 / -2

                               
Query: 482   LSCVFLCFIWACSPLWLF 535
             LSC + CF + C  +WLF
Sbjct: 23668 LSC*YNCFGYVCRVIWLF 23615


 Score = 27.6 bits (54), Expect = 6.2
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2 / -2

                          
Query: 494   FLCFIWACSPLWL 532
             ++C IW  SPLWL
Sbjct: 44707 WICTIWTLSPLWL 44669


>GI-6324971_04 gi-6324971_04.seq Continuation (4 of 10) of gi-6324971
             from base 300001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.5
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = +1 / -3

                                                
Query: 778   GSXPQSARVLLWFLRFVFACPVPASS*VFCLSLFS 882
             GS  +  R+LL F  FVF C   +      L LF 
Sbjct: 96525 GSIVKGRRILLQFTFFVFNCFTSSQVVHILLRLFR 96421


>GI-6323501_09 gi-6323501_09.seq Continuation (9 of 10) of gi-6323501
            from base 800001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.5
 Identities = 12/46 (26%), Positives = 23/46 (49%)
 Frame = -1 / +1

                                                          
Query: 555  SKTRPAENSQRGEHAQIKQRKTHDKGTPKRHKKRKQDARKTLPQSS 418
            SK +  + S++      K + + D+G   +HKK K+  +    +SS
Sbjct: 4924 SKKKKKKKSKKESKKGKKSKHSSDEGDKSKHKKSKKSKKHKKEESS 5061


>GI-6323501_08 gi-6323501_08.seq Continuation (8 of 10) of gi-6323501 from
              base 700001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.5
 Identities = 12/46 (26%), Positives = 23/46 (49%)
 Frame = -1 / +2

                                                            
Query: 555    SKTRPAENSQRGEHAQIKQRKTHDKGTPKRHKKRKQDARKTLPQSS 418
              SK +  + S++      K + + D+G   +HKK K+  +    +SS
Sbjct: 104924 SKKKKKKKSKKESKKGKKSKHSSDEGDKSKHKKSKKSKKHKKEESS 105061


>GI-6323501_02 gi-6323501_02.seq Continuation (2 of 10) of gi-6323501
             from base 100001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.5
 Identities = 12/31 (38%), Positives = 16/31 (50%)
 Frame = -1 / -3

                                            
Query: 789   RXGTGKEIKRQKNEKTKEEGKKQRTKARGEP 697
             R G   +I++ K EKT  E +  R  A  EP
Sbjct: 22767 RNGNRTKIRKLKVEKTNSEKQNARENASLEP 22675


 Score = 25.3 bits (49), Expect(2) = 9.2
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -1 / -3

                                      
Query: 774   KEIKRQKNEKTKEEGKKQRTKARGE 700
             KEI+ ++ E  KEE +KQ + A  E
Sbjct: 30441 KEIEEKEKETKKEEYQKQDSVANNE 30367


 Score = 18.9 bits (35), Expect(2) = 9.2
 Identities = 4/14 (28%), Positives = 10/14 (70%)
 Frame = -2 / -3

                           
Query: 713   KRGENQTDKDSTNK 672
             ++ EN+ + ++ NK
Sbjct: 30282 RKTENEIENETVNK 30241


>GI-14318439_07 gi-14318439_07.seq Continuation (7 of 11) of gi-14318439
             from base 600001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.5
 Identities = 13/29 (44%), Positives = 16/29 (54%)
 Frame = +1 / -3

                                          
Query: 433   RFSGVLFSFFVPFGCPLVVCLSLLYLGVF 519
             + S VLFS F P G  LVVC  +  +  F
Sbjct: 91872 KLSSVLFSLFGPQGNILVVCTRIYVMRFF 91786


>GI-14318439_05 gi-14318439_05.seq Continuation (5 of 11) of gi-14318439
             from base 400001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.5
 Identities = 14/32 (43%), Positives = 18/32 (55%)
 Frame = +1 / +3

                                             
Query: 430   KRFSGVLFSFFVPFGCPLVVCLSLLYLGVFSS 525
             K F   LFS F P    L +C+  L+LG F+S
Sbjct: 34395 KVFFMTLFSLFAPHFPFLDLCILTLHLGYFAS 34490


>GI-14318434_08 gi-14318434_08.seq Continuation (8 of 11) of gi-14318434
             from base 700001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.5
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2 / -3

                                  
Query: 470   LGVPLSCVFLCFIWACSPLWL 532
             LG  L+C FLC +W+ S L L
Sbjct: 64827 LGCLLACRFLCGVWSSSGLCL 64765


>GI-14270686_2 gi-14270686_2.seq Continuation (2 of 9) of gi-14270686
             from base 100001
          Length = 110000

 Score = 25.3 bits (49), Expect(2) = 5.4
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2 / +2

                         
Query: 551   LLVFCLCLWVGR 586
             L ++CLC W+ R
Sbjct: 28658 LFIYCLCFWLSR 28693


 Score = 19.8 bits (37), Expect(2) = 5.4
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +3 / +3

                            
Query: 453   FFFCAVWVSPCRVSF 497
             F  C+VW+S   V +
Sbjct: 28488 FMTCSVWISKLDVGW 28532


>GI-10383748 gi|10383748|ref|NC_001135.2| Saccharomyces cerevisiae
             chromosome III, complete c
          Length = 316613

 Score = 27.6 bits (54), Expect = 6.2
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3 / -2

                                          
Query: 447   LVFFFCAVWVSPCRVSFFALFGRVLLSGC 533
             ++ F C +  S C +SFF L  R+    C
Sbjct: 32620 VIMFICILCSSFCFISFFLLLSRLTFRRC 32534


 Score = 24.0 bits (46), Expect(2) = 5.9
 Identities = 7/19 (36%), Positives = 13/19 (67%)
 Frame = +2 / -3

                              
Query: 524 LWLFSAGRVLLVFCLCLWV 580
           +W++  G  + V+C C+WV
Sbjct: 321 VWVWVCGCGVWVWCGCVWV 265


 Score = 20.8 bits (39), Expect(2) = 5.9
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3 / -3

                      
Query: 666 CGFVCTVLVCL 698
           CG VC  +VC+
Sbjct: 189 CGVVCVGVVCV 157


>GI-6324971_09 gi-6324971_09.seq Continuation (9 of 10) of gi-6324971
             from base 800001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.2
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2 / -2

                                  
Query: 470   LGVPLSCVFLCFIWACSPLWL 532
             LG  L+C FLC +W+ S L L
Sbjct: 38971 LGSLLACRFLCGVWSSSGLCL 38909


>GI-14627172_1 gi-14627172_1.seq Continuation (1 of 8) of gi-14627172
             from base 1
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.2
 Identities = 9/19 (47%), Positives = 12/19 (62%)
 Frame = +1 / +2

                                
Query: 436   FSGVLFSFFVPFGCPLVVC 492
             F G++F +F  F C L VC
Sbjct: 77810 FQGIIFVWFNGFDCILFVC 77866


>GI-14270686_7 gi-14270686_7.seq Continuation (7 of 9) of gi-14270686
            from base 600001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.2
 Identities = 9/21 (42%), Positives = 11/21 (51%)
 Frame = +2 / +2

                                 
Query: 482  LSCVFLCFIWACSPLWLFSAG 544
            L C   C  W+C  LW+ S G
Sbjct: 3257 LVCYCRCCYWSCHLLWISSGG 3319


 Score = 24.4 bits (47), Expect(2) = 7.1
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2 / -1

                           
Query: 431   SVFLASCFLFLCRL 472
             S F  +CFLFLC L
Sbjct: 80312 SFFFFTCFLFLCCL 80271


 Score = 20.3 bits (38), Expect(2) = 7.1
 Identities = 7/13 (53%), Positives = 8/13 (60%)
 Frame = +1 / -2

                          
Query: 355   LAAPESPPPDRWT 393
             +A PES    RWT
Sbjct: 80464 IACPESSDSRRWT 80426


>GI-14270686_6 gi-14270686_6.seq Continuation (6 of 9) of gi-14270686 from
              base 500001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.2
 Identities = 9/21 (42%), Positives = 11/21 (51%)
 Frame = +2 / +3

                                   
Query: 482    LSCVFLCFIWACSPLWLFSAG 544
              L C   C  W+C  LW+ S G
Sbjct: 103257 LVCYCRCCYWSCHLLWISSGG 103319


>GI-7839148_06 gi-7839148_06.seq Continuation (6 of 16) of gi-7839148
             from base 500001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.5
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +3 / -3

                               
Query: 456   FFCAVWVSPCRVSFFALF 509
             F C+ WV  CR S F  F
Sbjct: 99762 FLCSCWVECCRFSIFYCF 99709


>GI-7276232_1 gi-7276232_1.seq Continuation (1 of 6) of gi-7276232 from
             base 1
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.5
 Identities = 9/22 (40%), Positives = 15/22 (67%)
 Frame = +3 / -3

                                   
Query: 423   IEEAFFWRLVFFFCAVWVSPCR 488
             IE  ++ R+V ++C  WV+P R
Sbjct: 60306 IEA*YYRRIVLYYCL*WVTPRR 60241


>GI-14389432_08 gi-14389432_08.seq Continuation (8 of 11) of gi-14389432
             from base 700001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.5
 Identities = 9/12 (75%), Positives = 12/12 (100%)
 Frame = -2 / +1

                         
Query: 194   EQRRNSCRRVSL 159
             ++RRNSCRR+SL
Sbjct: 29197 QRRRNSCRRISL 29232


  Database: /home/pmiguel/yeast/yeast
    Posted date:  Oct 27, 2001  2:26 PM
  Number of letters in database: 13,206,306
  Number of sequences in database:  122
  
Lambda     K      H
   0.318    0.135    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 19051832
Number of Sequences: 122
Number of extensions: 221643
Number of successful extensions: 18179
Number of sequences better than 10.0: 30
length of query: 309
length of database: 4,402,102
effective HSP length: 44
effective length of query: 264
effective length of database: 4,396,734
effective search space: 1160737776
effective search space used: 1160737776
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 53 (27.2 bits)