TBLASTX 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCPvsSce/blast/0941_A11_A21ZS5.seq
         (936 letters)

Database: /home/pmiguel/yeast/yeast
           122 sequences; 13,206,306 total letters

Searching............................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

GI-6322016_5 gi-6322016_5.seq Continuation (5 of 5) of gi-632201...    30  1.3
GI-6324971_02 gi-6324971_02.seq Continuation (2 of 10) of gi-632...    29  2.4
GI-6323989_2 gi-6323989_2.seq Continuation (2 of 8) of gi-632398...    29  2.4
GI-6324971_10 gi-6324971_10.seq Continuation (10 of 10) of gi-63...    29  3.3
GI-14318450 gi|14318450|ref|NC_001138.2| Saccharomyces cerevisia...    28  4.5
GI-6862570_4 gi-6862570_4.seq Continuation (4 of 6) of gi-686257...    28  4.5
GI-6319247 gi|6319247|ref|NC_001133.1| Saccharomyces cerevisiae ...    27  4.9
GI-7839148_10 gi-7839148_10.seq Continuation (10 of 16) of gi-78...    28  6.2
GI-14270686_1 gi-14270686_1.seq Continuation (1 of 9) of gi-1427...    28  6.2
GI-7839148_12 gi-7839148_12.seq Continuation (12 of 16) of gi-78...    27  8.6
GI-6323989_1 gi-6323989_1.seq Continuation (1 of 8) of gi-632398...    27  8.6
GI-6323501_08 gi-6323501_08.seq Continuation (8 of 10) of gi-632...    27  8.6
GI-14277709_1 gi-14277709_1.seq Continuation (1 of 7) of gi-1427...    27  8.6

>GI-6322016_5 gi-6322016_5.seq Continuation (5 of 5) of gi-6322016 from
             base 400001
          Length = 39885

 Score = 29.9 bits (59), Expect = 1.3
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = +1 / -3

                                         
Query: 64    QXKDQCWYRIVPYDWINSQKSNQHWLRK 147
             + +D  W+ I+  +W+  +K+ + WL K
Sbjct: 35419 RTRDTQWFSIIDKEWLRIRKTFEEWLDK 35336


>GI-6324971_02 gi-6324971_02.seq Continuation (2 of 10) of gi-6324971
             from base 100001
          Length = 110000

 Score = 29.0 bits (57), Expect = 2.4
 Identities = 13/32 (40%), Positives = 18/32 (55%)
 Frame = -2 / +2

                                             
Query: 236   GIRSAMRSTYAPTPLGNMVPPPGKVKRSPSLR 141
             G   A +ST      G +VP  GKV++ P+LR
Sbjct: 24302 GPNGAGKSTLIKLLTGELVPNEGKVEKHPNLR 24397


>GI-6323989_2 gi-6323989_2.seq Continuation (2 of 8) of gi-6323989 from
             base 100001
          Length = 110000

 Score = 29.0 bits (57), Expect = 2.4
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2 / +1

                                   
Query: 161   KRSPSLRSQCWLDFWLLIQS*G 96
             K S S++ Q W   W+LIQS G
Sbjct: 47914 KMSCSIKQQLWCAIWILIQSLG 47979


>GI-6324971_10 gi-6324971_10.seq Continuation (10 of 10) of gi-6324971
             from base 900001
          Length = 48061

 Score = 28.6 bits (56), Expect = 3.3
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +1 / -1

                                      
Query: 646   FLLICSFSPRALPPCPPVFLCLRLA 720
             FLLICS   ++  P PPV + L LA
Sbjct: 11527 FLLICSCC*KSSGPLPPVTMVLPLA 11453


>GI-14318450 gi|14318450|ref|NC_001138.2| Saccharomyces cerevisiae
             chromosome VI, complete ch
          Length = 270148

 Score = 28.1 bits (55), Expect = 4.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1 / +1

                                 
Query: 658   CSFSPRALPPCPPVFLCLRL 717
             C+  P+  P CPP  L L++
Sbjct: 85540 CAVMPKETPDCPPCLLVLKI 85599


>GI-6862570_4 gi-6862570_4.seq Continuation (4 of 6) of gi-6862570 from
             base 300001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1 / +3

                                
Query: 643   WFLLICSFSPRALPPCPPV 699
             WF + C F  R +P CP V
Sbjct: 26571 WFRMHCCFGCRTVPKCPRV 26627


>GI-6319247 gi|6319247|ref|NC_001133.1| Saccharomyces cerevisiae
              chromosome I, complete chro
          Length = 230203

 Score = 26.7 bits (52), Expect(2) = 4.9
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -1 / +3

                                         
Query: 447    RGKEERNGPRAHAARGRGTWGDQHHRQ 367
              RG+++  G  +   RG    G++H RQ
Sbjct: 129597 RGRKQGRGKESRTGRGN*QQGEEHRRQ 129677


 Score = 18.5 bits (34), Expect(2) = 4.9
 Identities = 5/11 (45%), Positives = 7/11 (63%)
 Frame = -2 / +1

                         
Query: 305    SPPQLATPQPV 273
              +PP L  P P+
Sbjct: 129754 APPALVMPSPI 129786


>GI-7839148_10 gi-7839148_10.seq Continuation (10 of 16) of gi-7839148
             from base 900001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.2
 Identities = 12/34 (35%), Positives = 17/34 (49%)
 Frame = +1 / -3

                                               
Query: 154   DRFTFPGGGTMFPNGVGAYVDLMADLIPGLFFGS 255
             D F+  GGG +FP G G  ++     I  +  GS
Sbjct: 32892 DTFSQ*GGGRLFPGGTGTEIEPTDHYITWMNLGS 32791


>GI-14270686_1 gi-14270686_1.seq Continuation (1 of 9) of gi-14270686
             from base 1
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.2
 Identities = 12/42 (28%), Positives = 22/42 (51%)
 Frame = -2 / -1

                                                       
Query: 350   SLGASDTVRIPRASRSPPQLATPQPVSSAVRTLPKNKPGIRS 225
             S+G   ++ +P+AS + P+   P   S+ +  L  N P + S
Sbjct: 37520 SIGPLPSIGLPKASTTLPKRPGPTGTSTILPVLLTNSPSLTS 37395


>GI-7839148_12 gi-7839148_12.seq Continuation (12 of 16) of gi-7839148
             from base 1100001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.6
 Identities = 11/19 (57%), Positives = 12/19 (62%)
 Frame = +1 / -2

                                
Query: 658   CSFSPRALPPCPPVFLCLR 714
             CS   R L  C PVFLCL+
Sbjct: 46738 CSIFSRWLHVCLPVFLCLQ 46682


>GI-6323989_1 gi-6323989_1.seq Continuation (1 of 8) of gi-6323989 from
             base 1
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.6
 Identities = 10/19 (52%), Positives = 12/19 (62%)
 Frame = -2 / -2

                                
Query: 89    RYQHWSLXWASLERSHQHL 33
             RYQ   L WAS+  SH H+
Sbjct: 83449 RYQQLLL*WASIRDSHDHV 83393


>GI-6323501_08 gi-6323501_08.seq Continuation (8 of 10) of gi-6323501
             from base 700001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.6
 Identities = 10/24 (41%), Positives = 15/24 (61%)
 Frame = +2 / +2

                                     
Query: 350   TSPTLSCLWCWSPHVPLPRAACAR 421
             +SPT SC    SP  PLP ++ ++
Sbjct: 23174 SSPTSSCCCSLSPSAPLPSSSLSK 23245


>GI-14277709_1 gi-14277709_1.seq Continuation (1 of 7) of gi-14277709
             from base 1
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.6
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2 / -3

                                  
Query: 95    TMRYQHWSLXWASLERSHQHL 33
             T R + WS+ W  + R+  HL
Sbjct: 68850 TARGREWSITWLEISRTDMHL 68788


  Database: /home/pmiguel/yeast/yeast
    Posted date:  Oct 27, 2001  2:26 PM
  Number of letters in database: 13,206,306
  Number of sequences in database:  122
  
Lambda     K      H
   0.318    0.135    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 12659450
Number of Sequences: 122
Number of extensions: 125001
Number of successful extensions: 10290
Number of sequences better than 10.0: 13
length of query: 312
length of database: 4,402,102
effective HSP length: 44
effective length of query: 267
effective length of database: 4,396,734
effective search space: 1173927978
effective search space used: 1173927978
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 53 (27.2 bits)