TBLASTX 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCPvsSce/blast/0941_B03_C05ZS5.seq
         (1331 letters)

Database: /home/pmiguel/yeast/yeast
           122 sequences; 13,206,306 total letters

Searching............................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

GI-7839148_07 gi-7839148_07.seq Continuation (7 of 16) of gi-783...    30  1.4
GI-14270686_7 gi-14270686_7.seq Continuation (7 of 9) of gi-1427...    29  4.9
GI-6862570_6 gi-6862570_6.seq Continuation (6 of 6) of gi-686257...    28  6.7

>GI-7839148_07 gi-7839148_07.seq Continuation (7 of 16) of gi-7839148
             from base 600001
          Length = 110000

 Score = 30.4 bits (60), Expect = 1.4
 Identities = 14/29 (48%), Positives = 16/29 (54%)
 Frame = -1 / +1

                                          
Query: 1211  YGXXCRXHSNFTRIT*YLSFNLPIS*YLS 1125
             YG   R  +NFTR+    S NLPI  Y S
Sbjct: 35467 YGQARRQVTNFTRVRRVYSHNLPIGQYFS 35553


>GI-14270686_7 gi-14270686_7.seq Continuation (7 of 9) of gi-14270686
             from base 600001
          Length = 110000

 Score = 28.6 bits (56), Expect = 4.9
 Identities = 10/19 (52%), Positives = 13/19 (67%)
 Frame = -2 / +1

                                
Query: 973   YSXXYFHLFNHSNISLHLF 917
             YS   FHLF+H+ +SL  F
Sbjct: 64732 YSRFIFHLFSHARVSLFSF 64788


>GI-6862570_6 gi-6862570_6.seq Continuation (6 of 6) of gi-6862570 from
             base 500001
          Length = 62639

 Score = 28.1 bits (55), Expect = 6.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3 / -2

                            
Query: 1281  TNTHXHMHSYLXPHP 1325
             T+TH H H++  PHP
Sbjct: 56953 THTHPHTHTHTHPHP 56909


  Database: /home/pmiguel/yeast/yeast
    Posted date:  Oct 27, 2001  2:26 PM
  Number of letters in database: 13,206,306
  Number of sequences in database:  122
  
Lambda     K      H
   0.318    0.135    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 10789842
Number of Sequences: 122
Number of extensions: 70203
Number of successful extensions: 3676
Number of sequences better than 10.0: 3
length of query: 443
length of database: 4,402,102
effective HSP length: 47
effective length of query: 396
effective length of database: 4,396,368
effective search space: 1740961728
effective search space used: 1740961728
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 54 (27.6 bits)