TBLASTX 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCPvsSce/blast/0941_B07_C13ZS5.seq
         (757 letters)

Database: /home/pmiguel/yeast/yeast
           122 sequences; 13,206,306 total letters

Searching............................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

GI-6323989_3 gi-6323989_3.seq Continuation (3 of 8) of gi-632398...    29  1.4
GI-14277709_1 gi-14277709_1.seq Continuation (1 of 7) of gi-1427...    29  1.4
GI-14389432_05 gi-14389432_05.seq Continuation (5 of 11) of gi-1...    29  1.9
GI-14270686_6 gi-14270686_6.seq Continuation (6 of 9) of gi-1427...    28  4.2
GI-14389432_09 gi-14389432_09.seq Continuation (9 of 11) of gi-1...    28  5.7
GI-7839148_14 gi-7839148_14.seq Continuation (14 of 16) of gi-78...    27  6.7
GI-7839148_13 gi-7839148_13.seq Continuation (13 of 16) of gi-78...    27  6.7
GI-6862570_2 gi-6862570_2.seq Continuation (2 of 6) of gi-686257...    27  6.7
GI-6324971_03 gi-6324971_03.seq Continuation (3 of 10) of gi-632...    27  6.7
GI-6323989_5 gi-6323989_5.seq Continuation (5 of 8) of gi-632398...    27  6.7
GI-6323501_08 gi-6323501_08.seq Continuation (8 of 10) of gi-632...    27  6.7
GI-6323501_05 gi-6323501_05.seq Continuation (5 of 10) of gi-632...    27  6.7
GI-6319247 gi|6319247|ref|NC_001133.1| Saccharomyces cerevisiae ...    25  8.6
GI-7839148_12 gi-7839148_12.seq Continuation (12 of 16) of gi-78...    27  9.1
GI-6323989_7 gi-6323989_7.seq Continuation (7 of 8) of gi-632398...    27  9.1
GI-14627172_7 gi-14627172_7.seq Continuation (7 of 8) of gi-1462...    27  9.1
GI-14389432_04 gi-14389432_04.seq Continuation (4 of 11) of gi-1...    27  9.1
GI-14318439_09 gi-14318439_09.seq Continuation (9 of 11) of gi-1...    27  9.1
GI-14318439_04 gi-14318439_04.seq Continuation (4 of 11) of gi-1...    27  9.1
GI-14318439_03 gi-14318439_03.seq Continuation (3 of 11) of gi-1...    27  9.1
GI-14318434_09 gi-14318434_09.seq Continuation (9 of 11) of gi-1...    27  9.1
GI-14277709_4 gi-14277709_4.seq Continuation (4 of 7) of gi-1427...    27  9.1

>GI-6323989_3 gi-6323989_3.seq Continuation (3 of 8) of gi-6323989 from
             base 200001
          Length = 110000

 Score = 29.5 bits (58), Expect = 1.4
 Identities = 12/28 (42%), Positives = 17/28 (59%)
 Frame = +3 / +1

                                         
Query: 633   CRCVWCAGLFFSPLSLVFFCISSFFAV* 716
             C C +C+ +F SPL LV   ++S   V*
Sbjct: 99874 CGCCFCSRIFLSPLVLVVAVVNSSVRV* 99957


 Score = 26.7 bits (52), Expect = 9.1
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +3 / +1

                    
Query: 630   CCRCVWC 650
             CCRC WC
Sbjct: 89806 CCRCYWC 89826


>GI-14277709_1 gi-14277709_1.seq Continuation (1 of 7) of gi-14277709
             from base 1
          Length = 110000

 Score = 29.5 bits (58), Expect = 1.4
 Identities = 11/26 (42%), Positives = 18/26 (68%)
 Frame = -1 / -1

                                       
Query: 706   KKEEIQKKTRESGEKKRPAHQTQRQQ 629
             KKEE +KK +E  EKK+   + +++Q
Sbjct: 64262 KKEEEEKKKKEEEEKKKKEEEEKKKQ 64185


 Score = 29.0 bits (57), Expect = 1.9
 Identities = 11/26 (42%), Positives = 18/26 (68%)
 Frame = -1 / -1

                                       
Query: 706   KKEEIQKKTRESGEKKRPAHQTQRQQ 629
             KKEE +KK +E  EKK+   + +++Q
Sbjct: 64214 KKEEEEKKKQEEEEKKKKEEEEKKKQ 64137


 Score = 27.6 bits (54), Expect = 4.8
 Identities = 10/26 (38%), Positives = 18/26 (68%)
 Frame = -1 / -1

                                       
Query: 706   KKEEIQKKTRESGEKKRPAHQTQRQQ 629
             KKEE +KK +E  EKK+   + ++++
Sbjct: 64286 KKEEEEKKKKEEEEKKKKEEEEKKKK 64209


 Score = 27.6 bits (54), Expect = 4.8
 Identities = 10/26 (38%), Positives = 18/26 (68%)
 Frame = -1 / -1

                                       
Query: 706   KKEEIQKKTRESGEKKRPAHQTQRQQ 629
             KKEE +KK +E  EKK+   + ++++
Sbjct: 64238 KKEEEEKKKKEEEEKKKQEEEEKKKK 64161


 Score = 27.6 bits (54), Expect = 4.8
 Identities = 10/26 (38%), Positives = 18/26 (68%)
 Frame = -1 / -1

                                       
Query: 706   KKEEIQKKTRESGEKKRPAHQTQRQQ 629
             KKEE +KK +E  EKK+   + ++++
Sbjct: 64310 KKEEEEKKKKEEEEKKKKEEEEKKKK 64233


 Score = 27.6 bits (54), Expect = 4.8
 Identities = 10/26 (38%), Positives = 18/26 (68%)
 Frame = -1 / -1

                                       
Query: 706   KKEEIQKKTRESGEKKRPAHQTQRQQ 629
             KKEE +KK +E  EKK+   + ++++
Sbjct: 64334 KKEEEEKKKKEEEEKKKKEEEEKKKK 64257


>GI-14389432_05 gi-14389432_05.seq Continuation (5 of 11) of gi-14389432
             from base 400001
          Length = 110000

 Score = 29.0 bits (57), Expect = 1.9
 Identities = 11/29 (37%), Positives = 17/29 (57%)
 Frame = +3 / -3

                                          
Query: 657   LFFSPLSLVFFCISSFFAV*LFHLLLSAK 743
             +FFS L   FFC   F  + +F +L++ K
Sbjct: 15747 IFFSMLCFFFFCFFFFILIFMFAILVTLK 15661


>GI-14270686_6 gi-14270686_6.seq Continuation (6 of 9) of gi-14270686
             from base 500001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.2
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -3 / -1

                                   
Query: 212   PRKKNSCEHHCGSSSRNTGVSK 147
             P   N C H CGSSS  +G +K
Sbjct: 96824 PIPVNICHHPCGSSSTPSGKAK 96759


>GI-14389432_09 gi-14389432_09.seq Continuation (9 of 11) of gi-14389432
             from base 800001
          Length = 110000

 Score = 27.6 bits (54), Expect = 5.7
 Identities = 10/30 (33%), Positives = 15/30 (49%)
 Frame = -3 / -3

                                           
Query: 302   RYKGGGHPQKKKTPPCLGGHSREKNPPQIG 213
             R K G    + KT      + RE+ PP++G
Sbjct: 78075 RLKAGAQQTRNKTTKKEKKYIREQRPPRLG 77986


>GI-7839148_14 gi-7839148_14.seq Continuation (14 of 16) of gi-7839148
            from base 1300001
          Length = 110000

 Score = 27.2 bits (53), Expect = 6.7
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3 / +3

                            
Query: 630  CCRCVWCAGLFFSPLS 677
            CCR VW +G +F  LS
Sbjct: 4704 CCRYVWQSGPYFQKLS 4751


 Score = 26.7 bits (52), Expect = 9.1
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1 / +2

                                 
Query: 175   LPQWCSQEFFFRGPIWGGFF 234
             +PQW  Q+FF R P +  +F
Sbjct: 38684 IPQWLRQQFFHRHPHFLPYF 38743


>GI-7839148_13 gi-7839148_13.seq Continuation (13 of 16) of gi-7839148
              from base 1200001
          Length = 110000

 Score = 27.2 bits (53), Expect = 6.7
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3 / +1

                              
Query: 630    CCRCVWCAGLFFSPLS 677
              CCR VW +G +F  LS
Sbjct: 104704 CCRYVWQSGPYFQKLS 104751


>GI-6862570_2 gi-6862570_2.seq Continuation (2 of 6) of gi-6862570 from
             base 100001
          Length = 110000

 Score = 27.2 bits (53), Expect = 6.7
 Identities = 10/17 (58%), Positives = 11/17 (63%)
 Frame = +1 / +2

                              
Query: 187   CSQEFFFRGPIWGGFFS 237
             C QEFFF   +W  FFS
Sbjct: 13229 CFQEFFF*KSVWTFFFS 13279


>GI-6324971_03 gi-6324971_03.seq Continuation (3 of 10) of gi-6324971
             from base 200001
          Length = 110000

 Score = 27.2 bits (53), Expect = 6.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1 / -1

                           
Query: 148   LDTPVFRLELPQWC 189
             +  P+F + LPQWC
Sbjct: 92447 ISQPIFLMSLPQWC 92406


>GI-6323989_5 gi-6323989_5.seq Continuation (5 of 8) of gi-6323989 from
             base 400001
          Length = 110000

 Score = 27.2 bits (53), Expect = 6.7
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -1 / +2

                                              
Query: 538   QKKSDEKGPREQRRRGRGAHNKQRANEKRTPRE 440
             +KKS +K  + ++RRG  +  K++ NEK   R+
Sbjct: 54329 KKKSRKKEKKRKKRRGCNS*LKRKKNEKGKKRK 54427


>GI-6323501_08 gi-6323501_08.seq Continuation (8 of 10) of gi-6323501
             from base 700001
          Length = 110000

 Score = 27.2 bits (53), Expect = 6.7
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -2 / +3

                                         
Query: 303   KVQGGRAPPKEKNPPLFRGTLPREKPPP 220
             KV+  +   + K     + TLPREK PP
Sbjct: 78156 KVKNNKGNHESKTKNKIKETLPREKKPP 78239


>GI-6323501_05 gi-6323501_05.seq Continuation (5 of 10) of gi-6323501
             from base 400001
          Length = 110000

 Score = 27.2 bits (53), Expect = 6.7
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +3 / -1

                               
Query: 627   GCCRCVWCAGLFFSPLSL 680
             GCC C    GLFF P  L
Sbjct: 99659 GCCHCYRY*GLFFGPTIL 99606


>GI-6319247 gi|6319247|ref|NC_001133.1| Saccharomyces cerevisiae
              chromosome I, complete chro
          Length = 230203

 Score = 25.3 bits (49), Expect(2) = 8.6
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = +3 / +1

                                      
Query: 75     IYEMLTPGPFAHXRPSGSPAAEVS 146
              ++ ++ P PF H R +G P+  ++
Sbjct: 147805 MFGLMEPDPFTHKRENGLPSGTLT 147876


 Score = 18.5 bits (34), Expect(2) = 8.6
 Identities = 6/15 (40%), Positives = 8/15 (53%)
 Frame = +2 / +3

                             
Query: 269    FSFGGALPPCTFGCL 313
              ++F   LP C   CL
Sbjct: 147864 WNFDSRLPCCIQFCL 147908


>GI-7839148_12 gi-7839148_12.seq Continuation (12 of 16) of gi-7839148
             from base 1100001
          Length = 110000

 Score = 26.7 bits (52), Expect = 9.1
 Identities = 9/29 (31%), Positives = 20/29 (68%)
 Frame = -2 / +1

                                          
Query: 357   AKENKNPKQAKGRARKQPKVQGGRAPPKE 271
             + E ++ K+ +GR +K+P+++    PPK+
Sbjct: 36595 SSEEEDIKKKRGRKKKKPRIKLVVHPPKQ 36681


>GI-6323989_7 gi-6323989_7.seq Continuation (7 of 8) of gi-6323989 from
             base 600001
          Length = 110000

 Score = 26.7 bits (52), Expect = 9.1
 Identities = 6/14 (42%), Positives = 9/14 (63%)
 Frame = +1 / -1

                           
Query: 178   PQWCSQEFFFRGPI 219
             P+WC ++ FF   I
Sbjct: 94427 PEWCGKQDFFEVEI 94386


>GI-14627172_7 gi-14627172_7.seq Continuation (7 of 8) of gi-14627172
             from base 600001
          Length = 110000

 Score = 26.7 bits (52), Expect = 9.1
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +3 / +3

                                      
Query: 678   LVFFCISSFFAV*LFHLLLSAKTNK 752
             ++FF   SFF V + HLLL  +T++
Sbjct: 78423 ILFFTSFSFFIVFVSHLLLKNRTSR 78497


>GI-14389432_04 gi-14389432_04.seq Continuation (4 of 11) of gi-14389432
             from base 300001
          Length = 110000

 Score = 26.7 bits (52), Expect = 9.1
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -1 / -2

                                                        
Query: 550   ESNVQKKSDEKGPREQRRRGRGAHNKQRANEKRTPREATKEGS 422
             +SN + +   +   +QRR  R    K+RA  +R   E  K+G 
Sbjct: 47839 KSNTETEMTLEKVTQQRRLQRLEFKKERAKLERELLELRKKGG 47711


>GI-14318439_09 gi-14318439_09.seq Continuation (9 of 11) of gi-14318439
             from base 800001
          Length = 110000

 Score = 26.7 bits (52), Expect = 9.1
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3 / +1

                             
Query: 630   CCRCVWCAGLFFSPLS 677
             CC C  C GLF+  +S
Sbjct: 22960 CCCCCCCCGLFWGTIS 23007


>GI-14318439_04 gi-14318439_04.seq Continuation (4 of 11) of gi-14318439
             from base 300001
          Length = 110000

 Score = 26.7 bits (52), Expect = 9.1
 Identities = 15/121 (12%), Positives = 34/121 (27%)
 Frame = -1 / +1

                                                                         
Query: 673   SGEKKRPAHQTQRQQPXXXXXXXXXXXXXXXXXXXXXXXXGESNVQKKSDEKGPREQRRR 494
             S   K+   + ++++                           S   K + EKG +     
Sbjct: 57727 SSSSKKKDKEKEKEKSSTTSSTSKKPASASSSSHGTTHSSASSTGSKSTTEKGKQSGSVP 57906

                                                                         
Query: 493   GRGAHNKQRANEKRTPREATKEGSHDRDXXXXXXXXXXXXXXXXXXXXKQKPQTSKRAGA 314
              +G H+    ++ +T    +   S  R                     +Q  Q+ + + +
Sbjct: 57907 SQGKHHSSSTSKTKTATTPSSSSSSSRSSSVSRSGSSSTKKTSSRKGQEQSKQSQQPSQS 58086

              
Query: 313   Q 311
             Q
Sbjct: 58087 Q 58089


>GI-14318439_03 gi-14318439_03.seq Continuation (3 of 11) of gi-14318439
             from base 200001
          Length = 110000

 Score = 26.7 bits (52), Expect = 9.1
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +3 / -1

                                         
Query: 639   CVWCAGLFFSPLSLVFFCISSFFAV*LF 722
             CVW +  F   LSL F  IS F + * F
Sbjct: 62879 CVWESNFFKGALSLNFTMISIFHSA*SF 62796


>GI-14318434_09 gi-14318434_09.seq Continuation (9 of 11) of gi-14318434
             from base 800001
          Length = 110000

 Score = 26.7 bits (52), Expect = 9.1
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3 / +1

                                      
Query: 630   CCRCVWCAGLFFSPLSLVFFCISSF 704
             CC  V C G   S  S +FF ++S+
Sbjct: 73540 CCDTVSCLGSLTSVKSSIFFAVNSW 73614


>GI-14277709_4 gi-14277709_4.seq Continuation (4 of 7) of gi-14277709
             from base 300001
          Length = 110000

 Score = 26.7 bits (52), Expect = 9.1
 Identities = 11/32 (34%), Positives = 17/32 (52%)
 Frame = -1 / -3

                                             
Query: 505   QRRRGRGAHNKQRANEKRTPREATKEGSHDRD 410
             Q + G+G     RA  K   R+A +EG+ + D
Sbjct: 69351 QSKTGKGNAKTGRAQTKEEARQAVREGAGEGD 69256


  Database: /home/pmiguel/yeast/yeast
    Posted date:  Oct 27, 2001  2:26 PM
  Number of letters in database: 13,206,306
  Number of sequences in database:  122
  
Lambda     K      H
   0.318    0.135    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 13989969
Number of Sequences: 122
Number of extensions: 155062
Number of successful extensions: 12203
Number of sequences better than 10.0: 22
length of query: 252
length of database: 4,402,102
effective HSP length: 44
effective length of query: 207
effective length of database: 4,396,734
effective search space: 910123938
effective search space used: 910123938
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 52 (26.7 bits)