TBLASTX 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCPvsSce/blast/0941_C03_E05ZS5.seq
         (914 letters)

Database: /home/pmiguel/yeast/yeast
           122 sequences; 13,206,306 total letters

Searching............................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

GI-6322016_2 gi-6322016_2.seq Continuation (2 of 5) of gi-632201...    31  0.48
GI-6323501_08 gi-6323501_08.seq Continuation (8 of 10) of gi-632...    30  0.90
GI-14277709_5 gi-14277709_5.seq Continuation (5 of 7) of gi-1427...    29  1.7
GI-6323989_8 gi-6323989_8.seq Continuation (8 of 8) of gi-632398...    29  2.3
GI-7839148_13 gi-7839148_13.seq Continuation (13 of 16) of gi-78...    29  3.2
GI-6324971_02 gi-6324971_02.seq Continuation (2 of 10) of gi-632...    29  3.2
GI-6323501_02 gi-6323501_02.seq Continuation (2 of 10) of gi-632...    29  3.2
GI-10383748 gi|10383748|ref|NC_001135.2| Saccharomyces cerevisia...    29  3.2
GI-14318434_02 gi-14318434_02.seq Continuation (2 of 11) of gi-1...    28  4.4
GI-6323501_05 gi-6323501_05.seq Continuation (5 of 10) of gi-632...    25  5.3
GI-14318450 gi|14318450|ref|NC_001138.2| Saccharomyces cerevisia...    28  6.1
GI-6862570_5 gi-6862570_5.seq Continuation (5 of 6) of gi-686257...    28  6.1
GI-6323501_01 gi-6323501_01.seq Continuation (1 of 10) of gi-632...    28  6.1
GI-14389432_04 gi-14389432_04.seq Continuation (4 of 11) of gi-1...    28  6.1
GI-14318434_07 gi-14318434_07.seq Continuation (7 of 11) of gi-1...    28  6.1
GI-14270686_2 gi-14270686_2.seq Continuation (2 of 9) of gi-1427...    23  7.0
GI-14270686_1 gi-14270686_1.seq Continuation (1 of 9) of gi-1427...    23  7.0
GI-14389432_11 gi-14389432_11.seq Continuation (11 of 11) of gi-...    23  7.3
GI-7839148_03 gi-7839148_03.seq Continuation (3 of 16) of gi-783...    27  8.4
GI-7276232_1 gi-7276232_1.seq Continuation (1 of 6) of gi-727623...    27  8.4
GI-6324971_05 gi-6324971_05.seq Continuation (5 of 10) of gi-632...    27  8.4
GI-6324971_04 gi-6324971_04.seq Continuation (4 of 10) of gi-632...    27  8.4
GI-6323989_7 gi-6323989_7.seq Continuation (7 of 8) of gi-632398...    27  8.4
GI-6323989_6 gi-6323989_6.seq Continuation (6 of 8) of gi-632398...    27  8.4
GI-14389432_05 gi-14389432_05.seq Continuation (5 of 11) of gi-1...    27  8.4
GI-14318434_10 gi-14318434_10.seq Continuation (10 of 11) of gi-...    27  8.4

>GI-6322016_2 gi-6322016_2.seq Continuation (2 of 5) of gi-6322016 from
             base 100001
          Length = 110000

 Score = 31.3 bits (62), Expect = 0.48
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +1 / -2

                                                              
Query: 520   KGASERGAKRIRLHILTDGRDVLDGSNVGPVETFYINLVYLCQPVVDAP 666
             K        +I + I   G+DVL+  N  P+ TF ++      P++D P
Sbjct: 13168 KAEGSSNNNQISIDIDPSGQDVLEEINEAPLNTFPLHQSVTDAPIIDIP 13022


>GI-6323501_08 gi-6323501_08.seq Continuation (8 of 10) of gi-6323501
             from base 700001
          Length = 110000

 Score = 30.4 bits (60), Expect = 0.90
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +2 / +2

                                                
Query: 536   GEQKEFAFTFLLMGVMFWMAVMLVLLRPFTLILFI 640
             G  K + F FL+     ++ + L+L     LILF+
Sbjct: 56909 GSAKHYCFFFLISSYFLFLILFLILFLILFLILFL 57013


 Score = 27.6 bits (54), Expect = 6.1
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = -1 / +3

                                                  
Query: 131   VFPLGSVGWSGSVQFVVAISFVFSXCGLRNKNCSYPC 21
             V  LGS   S S  F +  + +FS CG    NC   C
Sbjct: 64899 VLKLGS*ARSLSNHFSIERNIMFSLCGAIGTNCLSAC 65009


>GI-14277709_5 gi-14277709_5.seq Continuation (5 of 7) of gi-14277709
             from base 400001
          Length = 110000

 Score = 29.5 bits (58), Expect = 1.7
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2 / +3

                                 
Query: 313   HCCPCRRHLGDQQQFHEPSL 254
             H C C ++L   Q+FH PS+
Sbjct: 32817 HHCDCLKYLSKFQEFHRPSM 32876


>GI-6323989_8 gi-6323989_8.seq Continuation (8 of 8) of gi-6323989 from
             base 700001
          Length = 84328

 Score = 29.0 bits (57), Expect = 2.3
 Identities = 10/45 (22%), Positives = 29/45 (64%)
 Frame = +2 / -1

                                                          
Query: 194   MSPRRPSWILSRMVLLRSGD**RLMELLLVSQVTTTWATVKLATM 328
             M+P++P + + +++L+R G   +  + +L+  +  TW+ +++ T+
Sbjct: 22738 MNPQKPEFWIPKVMLMRLGPKPKERDHVLLHPI*RTWSRLQMKTL 22604


>GI-7839148_13 gi-7839148_13.seq Continuation (13 of 16) of gi-7839148
             from base 1200001
          Length = 110000

 Score = 28.6 bits (56), Expect = 3.2
 Identities = 9/24 (37%), Positives = 14/24 (57%)
 Frame = -3 / +1

                                     
Query: 96    RPIRGRHLLCFFXVWFAKQELLVP 25
             + I  +HL CF  +WF   +L +P
Sbjct: 90511 KSINCKHLQCFDALWFLHSQLQIP 90582


>GI-6324971_02 gi-6324971_02.seq Continuation (2 of 10) of gi-6324971
             from base 100001
          Length = 110000

 Score = 28.6 bits (56), Expect = 3.2
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = -3 / -1

                                  
Query: 90    IRGRHLLCFFXVWFAKQELLV 28
             +RGRH++ F  +W+  + LL+
Sbjct: 16340 LRGRHIIVFISIWWLAKCLLI 16278


>GI-6323501_02 gi-6323501_02.seq Continuation (2 of 10) of gi-6323501
             from base 100001
          Length = 110000

 Score = 28.6 bits (56), Expect = 3.2
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -1 / -1

                               
Query: 482   PPSLNKPIRCRVPLSKDS 429
             PP+L KPI C VP  +++
Sbjct: 29084 PPALKKPINCPVPTHREA 29031


 Score = 27.6 bits (54), Expect = 6.1
 Identities = 14/39 (35%), Positives = 20/39 (50%)
 Frame = +1 / +2

                                                    
Query: 436   FDKGTLHLIGLLSDGGVHSRLDQVQLIVKGASERGAKRI 552
             F K   +L  L  +  +   LDQ + I K A+ERG + I
Sbjct: 71918 FSKNNPNLKYLFVEWALACSLDQAESIYKAAAERGVQTI 72034


>GI-10383748 gi|10383748|ref|NC_001135.2| Saccharomyces cerevisiae
              chromosome III, complete c
          Length = 316613

 Score = 28.6 bits (56), Expect = 3.2
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = -3 / +2

                                                          
Query: 681    TTRSNRGINNRLAKINKINVKGLNRTNITAIQNITPISKNVKAN 550
              T +  R  + RL+K   +++  +   N+ ++QN  P  KN+  N
Sbjct: 274400 TQQEYRSPSQRLSKGRSMSLPKIFARNLRSLQNNAPPGKNINVN 274531


>GI-14318434_02 gi-14318434_02.seq Continuation (2 of 11) of gi-14318434
             from base 100001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.4
 Identities = 9/22 (40%), Positives = 14/22 (62%)
 Frame = -1 / -3

                                   
Query: 245   FSGAPFLRESMTGVWATWMQLY 180
             F+G P  ++ M G W  WMQ++
Sbjct: 16200 FNGRPPPKKIMLGSWKRWMQVF 16135


>GI-6323501_05 gi-6323501_05.seq Continuation (5 of 10) of gi-6323501
             from base 400001
          Length = 110000

 Score = 25.3 bits (49), Expect(2) = 5.3
 Identities = 9/33 (27%), Positives = 19/33 (57%)
 Frame = -1 / +2

                                              
Query: 491   E*TPPSLNKPIRCRVPLSKDSLM*LNPSSSQIF 393
             E +P ++NK ++ ++ +  D+   L    S+IF
Sbjct: 85301 EVSPKNINKVVQTQIAVEGDATTNLGKMMSKIF 85399


 Score = 19.8 bits (37), Expect(2) = 5.3
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3 / +2

                           
Query: 330   SIVANFTVAHVVVT 289
             S VAN T  HV+VT
Sbjct: 85523 SKVANDTGRHVIVT 85564


>GI-14318450 gi|14318450|ref|NC_001138.2| Saccharomyces cerevisiae
             chromosome VI, complete ch
          Length = 270148

 Score = 27.6 bits (54), Expect = 6.1
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +2 / -2

                           
Query: 752   LLSIALWCFVFCPF 793
             LLS+++W  V+CP+
Sbjct: 93396 LLSVSIWVMVYCPY 93355


>GI-6862570_5 gi-6862570_5.seq Continuation (5 of 6) of gi-6862570 from
             base 400001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.1
 Identities = 7/15 (46%), Positives = 11/15 (72%)
 Frame = -2 / +1

                            
Query: 340   QLQEHCGQLHCCPCR 296
             +++  C +LHCC CR
Sbjct: 63013 RIRPSCQKLHCCWCR 63057


>GI-6323501_01 gi-6323501_01.seq Continuation (1 of 10) of gi-6323501
             from base 1
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.1
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +2 / +1

                                             
Query: 560   TFLLMGVMFWMAVMLVLLRPFTLILFIFANRL 655
             +F ++  +FW   + +   PF L  +IF+N L
Sbjct: 11842 SFKMLKKLFWKNELNLFSEPFNLFPYIFSNML 11937


>GI-14389432_04 gi-14389432_04.seq Continuation (4 of 11) of gi-14389432
             from base 300001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.1
 Identities = 10/23 (43%), Positives = 15/23 (64%)
 Frame = +2 / -1

                                    
Query: 578   VMFWMAVMLVLLRPFTLILFIFA 646
             +M+W  V  + L  FT+ILF+ A
Sbjct: 26609 IMWWQKVKNITLLTFTIILFVSA 26541


>GI-14318434_07 gi-14318434_07.seq Continuation (7 of 11) of gi-14318434
             from base 600001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.1
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -2 / -2

                                        
Query: 373   QQASHLEQRFGQLQEHCGQLHCCPCRR 293
             QQ  H++Q+    Q  C     C CRR
Sbjct: 11137 QQDEHIQQKDRMEQRICDVACECTCRR 11057


>GI-14270686_2 gi-14270686_2.seq Continuation (2 of 9) of
           gi-14270686 from base 100001
          Length = 110000

 Score = 22.6 bits (43), Expect(2) = 7.0
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1 / -2

                                 
Query: 403 EDEGFNYIKESFDKGTLHLIGL 468
           E   F  +K  FDK  + LIGL
Sbjct: 838 EVSAFAKLKPEFDKRNVKLIGL 773


 Score = 22.1 bits (42), Expect(2) = 7.0
 Identities = 9/17 (52%), Positives = 12/17 (69%)
 Frame = +2 / -3

                            
Query: 263 LMELLLVSQVTTTWATV 313
           L + L+ S  TTTWAT+
Sbjct: 939 LTQRLVKSIFTTTWATL 889


>GI-14270686_1 gi-14270686_1.seq Continuation (1 of 9) of gi-14270686 from
              base 1
          Length = 110000

 Score = 22.6 bits (43), Expect(2) = 7.0
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1 / -1

                                    
Query: 403    EDEGFNYIKESFDKGTLHLIGL 468
              E   F  +K  FDK  + LIGL
Sbjct: 100838 EVSAFAKLKPEFDKRNVKLIGL 100773


 Score = 22.1 bits (42), Expect(2) = 7.0
 Identities = 9/17 (52%), Positives = 12/17 (69%)
 Frame = +2 / -2

                               
Query: 263    LMELLLVSQVTTTWATV 313
              L + L+ S  TTTWAT+
Sbjct: 100939 LTQRLVKSIFTTTWATL 100889


>GI-14389432_11 gi-14389432_11.seq Continuation (11 of 11) of
             gi-14389432 from base 1000001
          Length = 78173

 Score = 23.1 bits (44), Expect(2) = 7.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2 / +1

                            
Query: 749   LLLSIALWCFVFCPF 793
             LLL ++LW    CPF
Sbjct: 11959 LLLKLSLWDEAACPF 12003


 Score = 21.7 bits (41), Expect(2) = 7.3
 Identities = 5/11 (45%), Positives = 7/11 (63%)
 Frame = +1 / +1

                        
Query: 853   FSFYRLPVLRC 885
             FS +  P+L C
Sbjct: 12094 FSLFSSPILAC 12126


>GI-7839148_03 gi-7839148_03.seq Continuation (3 of 16) of gi-7839148
             from base 200001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.4
 Identities = 12/46 (26%), Positives = 20/46 (43%)
 Frame = +1 / -1

                                                           
Query: 109   PTLPKGKTVAVVVLDGWGEASPDQYNCIHVAQTPVMDSLKNGAPEK 246
             PT P G  +   + D +     +++ C+ V +      LKNG   K
Sbjct: 75473 PTEPNGIKLEQFIFDVFDTVPLNKFGCLEVDRCKEFSPLKNGPGSK 75336


>GI-7276232_1 gi-7276232_1.seq Continuation (1 of 6) of gi-7276232 from
             base 1
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.4
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +2 / +1

                                
Query: 737   VCRRLLLSIALWCFVFCPF 793
             +CRRLLL+++L C  F  F
Sbjct: 33436 LCRRLLLNLSLLCLFFFLF 33492


>GI-6324971_05 gi-6324971_05.seq Continuation (5 of 10) of gi-6324971
            from base 400001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.4
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1 / -1

                              
Query: 548  LFAPLSLAPFTINCTWSS 495
            L  PLS  PF +NCT S+
Sbjct: 8528 LLLPLSFMPFPMNCTLST 8475


>GI-6324971_04 gi-6324971_04.seq Continuation (4 of 10) of gi-6324971 from
              base 300001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.4
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1 / -3

                                
Query: 548    LFAPLSLAPFTINCTWSS 495
              L  PLS  PF +NCT S+
Sbjct: 108528 LLLPLSFMPFPMNCTLST 108475


>GI-6323989_7 gi-6323989_7.seq Continuation (7 of 8) of gi-6323989 from
             base 600001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.4
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +2 / -1

                                   
Query: 734   CVCRRLLLSIALWCFVFCPFPC 799
             C+C+R  LS   WC V C   C
Sbjct: 94499 CICQRWALSGLAWCEVPCYQRC 94434


>GI-6323989_6 gi-6323989_6.seq Continuation (6 of 8) of gi-6323989 from
             base 500001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.4
 Identities = 9/17 (52%), Positives = 13/17 (75%)
 Frame = +1 / +1

                              
Query: 268   GTAVGLPSDDDMGNSEV 318
             G  V +P +DD+GN+EV
Sbjct: 31081 GETVHMPEEDDIGNNEV 31131


>GI-14389432_05 gi-14389432_05.seq Continuation (5 of 11) of gi-14389432
             from base 400001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.4
 Identities = 13/31 (41%), Positives = 16/31 (50%)
 Frame = -1 / +2

                                            
Query: 602   TLLPSKTSRPSVRM*RRILFAPLSLAPFTIN 510
             T+LP     P+      I FAP SL  FTI+
Sbjct: 73184 TILPVAVQEPAPEPANTIPFAPRSLTAFTIS 73276


 Score = 27.2 bits (53), Expect = 8.4
 Identities = 13/31 (41%), Positives = 16/31 (50%)
 Frame = -1 / +3

                                            
Query: 602   TLLPSKTSRPSVRM*RRILFAPLSLAPFTIN 510
             T+LP     P+      I FAP SL  FTI+
Sbjct: 82764 TILPVAVQEPAPEPANTIPFAPRSLTAFTIS 82856


 Score = 27.2 bits (53), Expect = 8.4
 Identities = 13/31 (41%), Positives = 16/31 (50%)
 Frame = -1 / +1

                                            
Query: 602   TLLPSKTSRPSVRM*RRILFAPLSLAPFTIN 510
             T+LP     P+      I FAP SL  FTI+
Sbjct: 86416 TILPVAVQEPAPEPANTIPFAPRSLTAFTIS 86508


 Score = 27.2 bits (53), Expect = 8.4
 Identities = 13/31 (41%), Positives = 16/31 (50%)
 Frame = -1 / +1

                                            
Query: 602   TLLPSKTSRPSVRM*RRILFAPLSLAPFTIN 510
             T+LP     P+      I FAP SL  FTI+
Sbjct: 69532 TILPVAVQEPAPEPANTIPFAPRSLTAFTIS 69624


>GI-14318434_10 gi-14318434_10.seq Continuation (10 of 11) of
             gi-14318434 from base 900001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.4
 Identities = 8/22 (36%), Positives = 13/22 (58%)
 Frame = +2 / +1

                                   
Query: 563   FLLMGVMFWMAVMLVLLRPFTL 628
             F+L G+MFW    +  +  F+L
Sbjct: 24514 FILFGIMFW*VFFIFYISAFSL 24579


  Database: /home/pmiguel/yeast/yeast
    Posted date:  Oct 27, 2001  2:26 PM
  Number of letters in database: 13,206,306
  Number of sequences in database:  122
  
Lambda     K      H
   0.318    0.135    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 22315549
Number of Sequences: 122
Number of extensions: 263166
Number of successful extensions: 18157
Number of sequences better than 10.0: 26
length of query: 304
length of database: 4,402,102
effective HSP length: 44
effective length of query: 260
effective length of database: 4,396,734
effective search space: 1143150840
effective search space used: 1143150840
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 53 (27.2 bits)