TBLASTX 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCPvsSce/blast/0941_C05_E09ZS5.seq
         (919 letters)

Database: /home/pmiguel/yeast/yeast
           122 sequences; 13,206,306 total letters

Searching............................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

GI-10383748 gi|10383748|ref|NC_001135.2| Saccharomyces cerevisia...    30  0.91
GI-14389432_01 gi-14389432_01.seq Continuation (1 of 11) of gi-1...    25  1.8
GI-6324971_04 gi-6324971_04.seq Continuation (4 of 10) of gi-632...    28  2.3
GI-7276232_2 gi-7276232_2.seq Continuation (2 of 6) of gi-727623...    29  2.4
GI-14627172_1 gi-14627172_1.seq Continuation (1 of 8) of gi-1462...    29  2.4
GI-7839148_05 gi-7839148_05.seq Continuation (5 of 16) of gi-783...    29  3.2
GI-6322016_5 gi-6322016_5.seq Continuation (5 of 5) of gi-632201...    28  4.4
GI-7276232_4 gi-7276232_4.seq Continuation (4 of 6) of gi-727623...    28  4.4
GI-6322016_4 gi-6322016_4.seq Continuation (4 of 5) of gi-632201...    28  4.4
GI-14318434_03 gi-14318434_03.seq Continuation (3 of 11) of gi-1...    28  4.4
GI-7839148_10 gi-7839148_10.seq Continuation (10 of 16) of gi-78...    28  6.1
GI-7839148_09 gi-7839148_09.seq Continuation (9 of 16) of gi-783...    28  6.1
GI-14389432_03 gi-14389432_03.seq Continuation (3 of 11) of gi-1...    28  6.1
GI-14318434_04 gi-14318434_04.seq Continuation (4 of 11) of gi-1...    28  6.1
GI-6319247 gi|6319247|ref|NC_001133.1| Saccharomyces cerevisiae ...    27  8.4
GI-14277709_7 gi-14277709_7.seq Continuation (7 of 7) of gi-1427...    27  8.4
GI-7839148_02 gi-7839148_02.seq Continuation (2 of 16) of gi-783...    27  8.4
GI-14627172_7 gi-14627172_7.seq Continuation (7 of 8) of gi-1462...    27  8.4
GI-14318439_10 gi-14318439_10.seq Continuation (10 of 11) of gi-...    27  8.4
GI-14627172_8 gi-14627172_8.seq Continuation (8 of 8) of gi-1462...    27  8.4

>GI-10383748 gi|10383748|ref|NC_001135.2| Saccharomyces cerevisiae
              chromosome III, complete c
          Length = 316613

 Score = 30.4 bits (60), Expect = 0.91
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1 / +3

                                         
Query: 73     IALCGSEAQKQKYLPSLAQFKTVGCWA 153
              I LCG   Q + ++P +  F + G W+
Sbjct: 260520 IILCGGHGQYKVFMPDIRNFTSAGIWS 260600


 Score = 29.5 bits (58), Expect = 1.7
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1 / -1

                                        
Query: 478   KVLAMSRIMVAWQPIGISMGVYDMCHR 558
             ++  M R+ + W P  I+ G   MCH+
Sbjct: 42299 EITVMKRLHIMWSPWRINSGTQCMCHK 42219


 Score = 27.2 bits (53), Expect = 8.4
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -1 / +2

                                                 
Query: 259    CYLSSAFGHLIANRQVP*LLKFSRSLHHFHNLALL 155
              CY S     ++  RQ+P*L +  RSL + H   LL
Sbjct: 220514 CYPSH*NQSILPRRQIP*LHRSLRSLRYLHLRHLL 220618


>GI-14389432_01 gi-14389432_01.seq Continuation (1 of 11) of gi-14389432
             from base 1
          Length = 110000

 Score = 25.3 bits (49), Expect(2) = 1.8
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = +3 / -1

                                                        
Query: 663   RLALVQAL*VRQNDTXPCYFGQAWTSSKSREVVSLGRELLGRN 791
             RLAL   L*V Q  +   +   A   S+ R V   G   LGR+
Sbjct: 69635 RLALPNGL*VYQRSSGMMWARPAGKRSQRRTVTKFGNLNLGRD 69507


 Score = 21.7 bits (41), Expect(2) = 1.8
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +3 / -3

                      
Query: 612   PRKACSDAW 638
             P+KACS  W
Sbjct: 69642 PKKACSSKW 69616


>GI-6324971_04 gi-6324971_04.seq Continuation (4 of 10) of gi-6324971
             from base 300001
          Length = 110000

 Score = 28.1 bits (55), Expect(2) = 2.3
 Identities = 14/37 (37%), Positives = 18/37 (47%)
 Frame = -2 / -2

                                                  
Query: 435   FWDKYFIQKDIAILNHSKSNFVLNFCGSQTRRSLLHN 325
             FWDK+     I+ L  S  N V N   S+ R  L+ N
Sbjct: 72112 FWDKWCSLDIISCLRLSNMNLVQNIVDSRLRFQLILN 72002


 Score = 18.5 bits (34), Expect(2) = 2.3
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -3 / -2

                     
Query: 317   FSCFVSAF 294
             F+CFVS F
Sbjct: 71983 FTCFVSNF 71960


>GI-7276232_2 gi-7276232_2.seq Continuation (2 of 6) of gi-7276232 from
             base 100001
          Length = 110000

 Score = 29.0 bits (57), Expect = 2.4
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3 / +1

                               
Query: 546   HVPSVFERKEAVWSSPGS 599
             H P+ F R+   WS+PGS
Sbjct: 93508 HCPTNFSRRRPAWSTPGS 93561


>GI-14627172_1 gi-14627172_1.seq Continuation (1 of 8) of gi-14627172
             from base 1
          Length = 110000

 Score = 29.0 bits (57), Expect = 2.4
 Identities = 11/29 (37%), Positives = 15/29 (50%)
 Frame = +3 / -2

                                          
Query: 324   HCEEGSAWFESHKNSKQNWT*NGSEWRYP 410
             HC E   WF+  ++SK N   +   WR P
Sbjct: 25768 HCSEEHEWFKESRSSKANPKRDWFFWRPP 25682


>GI-7839148_05 gi-7839148_05.seq Continuation (5 of 16) of gi-7839148
             from base 400001
          Length = 110000

 Score = 28.6 bits (56), Expect = 3.2
 Identities = 15/49 (30%), Positives = 22/49 (44%)
 Frame = +3 / +3

                                                              
Query: 483   PSNVTYYGGLAANWHIDGRLRHVPSVFERKEAVWSSPGSLSAQPRKACS 629
             PSN  Y  G+ ++W  +         FE K+  +SS  + S    K CS
Sbjct: 36570 PSNTLYNSGIKSSWKSESSSGSPVVKFEDKDIEFSSSPNDSMLLSKICS 36716


>GI-6322016_5 gi-6322016_5.seq Continuation (5 of 5) of gi-6322016
            from base 400001
          Length = 39885

 Score = 28.1 bits (55), Expect = 4.4
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2 / +1

                          
Query: 306  CVCIPSQNYKHICK 265
            C+C+ S  YKH C+
Sbjct: 9691 CICLSSTGYKHFCQ 9732


>GI-7276232_4 gi-7276232_4.seq Continuation (4 of 6) of gi-7276232 from
             base 300001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.4
 Identities = 12/28 (42%), Positives = 14/28 (49%)
 Frame = -2 / -2

                                         
Query: 648   LDVTKHPNKLFLVELKGCQGSSKLLPFF 565
             L ++ HP KL      GCQ   K LP F
Sbjct: 65929 LSLSFHPQKLVSTHQVGCQRRWKTLPIF 65846


>GI-6322016_4 gi-6322016_4.seq Continuation (4 of 5) of gi-6322016 from
              base 300001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.4
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2 / +2

                            
Query: 306    CVCIPSQNYKHICK 265
              C+C+ S  YKH C+
Sbjct: 109691 CICLSSTGYKHFCQ 109732


>GI-14318434_03 gi-14318434_03.seq Continuation (3 of 11) of gi-14318434
             from base 200001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.4
 Identities = 9/24 (37%), Positives = 12/24 (49%)
 Frame = +3 / +1

                                     
Query: 258   QHVCRCACNFG*ECRHKATKRIHC 329
             +H C C C+F   CR +     HC
Sbjct: 24817 RHHCHCHCHFHFRCRCRCRCCFHC 24888


>GI-7839148_10 gi-7839148_10.seq Continuation (10 of 16) of
           gi-7839148 from base 900001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.1
 Identities = 10/24 (41%), Positives = 14/24 (57%)
 Frame = +2 / -3

                                   
Query: 578 SLELPWQPFSSTKKSLFGCLVTSR 649
           +L+L W+P S      F CL+T R
Sbjct: 297 ALKLAWKPHSLFADCRFACLITKR 226


>GI-7839148_09 gi-7839148_09.seq Continuation (9 of 16) of gi-7839148 from
              base 800001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.1
 Identities = 10/24 (41%), Positives = 14/24 (57%)
 Frame = +2 / -2

                                      
Query: 578    SLELPWQPFSSTKKSLFGCLVTSR 649
              +L+L W+P S      F CL+T R
Sbjct: 100297 ALKLAWKPHSLFADCRFACLITKR 100226


>GI-14389432_03 gi-14389432_03.seq Continuation (3 of 11) of gi-14389432
             from base 200001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.1
 Identities = 12/27 (44%), Positives = 16/27 (58%)
 Frame = -2 / +2

                                        
Query: 360   CGSQTRRSLLHNESV*LLCVCIPSQNY 280
             CGS   RSL +N+   LL V +P+  Y
Sbjct: 76736 CGSLINRSLCNNKETSLLVVLLPAIAY 76816


>GI-14318434_04 gi-14318434_04.seq Continuation (4 of 11) of gi-14318434
             from base 300001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.1
 Identities = 12/46 (26%), Positives = 23/46 (49%)
 Frame = +3 / +3

                                                           
Query: 420   SICPRRRQINRHQFISGYKQGPSNVTYYGGLAANWHIDGRLRHVPS 557
             S+CPR  Q +  Q    +K+  +N + +G   + W+  G+    P+
Sbjct: 55956 SLCPRNFQTSERQGNCYFKRTCANSSRHGRSKSEWYRCGQTTATPN 56093


>GI-6319247 gi|6319247|ref|NC_001133.1| Saccharomyces cerevisiae
              chromosome I, complete chro
          Length = 230203

 Score = 27.2 bits (53), Expect = 8.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1 / +1

                               
Query: 277    AHLQTCCYLSSAFGHLI 227
              AH + CC +S  F HL+
Sbjct: 167428 AHFRFCCLVSELFSHLV 167478


>GI-14277709_7 gi-14277709_7.seq Continuation (7 of 7) of gi-14277709
             from base 600001
          Length = 66445

 Score = 27.2 bits (53), Expect = 8.4
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2 / +3

                                     
Query: 576   LPFFQIPMAHVVDAHRYANWLPSH 505
             +PFF   +  V  +  +++WL SH
Sbjct: 57297 IPFFTASVGRVASSKTFSSWLKSH 57368


>GI-7839148_02 gi-7839148_02.seq Continuation (2 of 16) of gi-7839148
             from base 100001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.4
 Identities = 10/26 (38%), Positives = 18/26 (68%)
 Frame = +3 / -3

                                       
Query: 282   NFG*ECRHKATKRIHCEEGSAWFESH 359
             +FG +C+ K + R+  E+GSA+  S+
Sbjct: 45006 HFGDDCKEKRSSRVPNEDGSAFTGSN 44929


>GI-14627172_7 gi-14627172_7.seq Continuation (7 of 8) of gi-14627172 from
              base 600001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.4
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = +3 / +3

                                                       
Query: 306    KATKRIHCEEGSAWFESHKNSKQNWT*NGSEWRYPSE*SIC 428
              K  K  HC E      + K  K+ W     +  YP +*SIC
Sbjct: 101271 KKFKVDHCTEKFVEHVTTKRKKKIWLRKDRQVEYPYK*SIC 101393


>GI-14318439_10 gi-14318439_10.seq Continuation (10 of 11) of
             gi-14318439 from base 900001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.4
 Identities = 10/21 (47%), Positives = 12/21 (56%)
 Frame = -1 / +3

                                  
Query: 283   LQAHLQTCCYLSSAFGHLIAN 221
             L  HLQ CCY+S   G   A+
Sbjct: 59928 LAQHLQLCCYISLLMGSSAAS 59990


>GI-14627172_8 gi-14627172_8.seq Continuation (8 of 8) of gi-14627172
            from base 700001
          Length = 45444

 Score = 27.2 bits (53), Expect = 8.4
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = +3 / +2

                                                     
Query: 306  KATKRIHCEEGSAWFESHKNSKQNWT*NGSEWRYPSE*SIC 428
            K  K  HC E      + K  K+ W     +  YP +*SIC
Sbjct: 1271 KKFKVDHCTEKFVEHVTTKRKKKIWLRKDRQVEYPYK*SIC 1393


  Database: /home/pmiguel/yeast/yeast
    Posted date:  Oct 27, 2001  2:26 PM
  Number of letters in database: 13,206,306
  Number of sequences in database:  122
  
Lambda     K      H
   0.318    0.135    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 28601074
Number of Sequences: 122
Number of extensions: 430170
Number of successful extensions: 22604
Number of sequences better than 10.0: 20
length of query: 306
length of database: 4,402,102
effective HSP length: 44
effective length of query: 261
effective length of database: 4,396,734
effective search space: 1147547574
effective search space used: 1147547574
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 53 (27.2 bits)