TBLASTX 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCPvsSce/blast/0941_C07_E13ZS5.seq
         (866 letters)

Database: /home/pmiguel/yeast/yeast
           122 sequences; 13,206,306 total letters

Searching............................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

GI-14318434_11 gi-14318434_11.seq Continuation (11 of 11) of gi-...    34  0.092
GI-14318439_11 gi-14318439_11.seq Continuation (11 of 11) of gi-...    33  0.13
GI-7839148_01 gi-7839148_01.seq Continuation (1 of 16) of gi-783...    30  0.85
GI-6862570_3 gi-6862570_3.seq Continuation (3 of 6) of gi-686257...    30  1.2
GI-14627172_2 gi-14627172_2.seq Continuation (2 of 8) of gi-1462...    30  1.2
GI-14318439_08 gi-14318439_08.seq Continuation (8 of 11) of gi-1...    29  1.6
GI-14389432_07 gi-14389432_07.seq Continuation (7 of 11) of gi-1...    29  3.0
GI-14318439_04 gi-14318439_04.seq Continuation (4 of 11) of gi-1...    29  3.0
GI-14318434_03 gi-14318434_03.seq Continuation (3 of 11) of gi-1...    29  3.0
GI-6323989_2 gi-6323989_2.seq Continuation (2 of 8) of gi-632398...    28  4.2
GI-14389432_08 gi-14389432_08.seq Continuation (8 of 11) of gi-1...    27  5.0
GI-6319247 gi|6319247|ref|NC_001133.1| Saccharomyces cerevisiae ...    28  5.7
GI-6324971_09 gi-6324971_09.seq Continuation (9 of 10) of gi-632...    28  5.7
GI-14277709_6 gi-14277709_6.seq Continuation (6 of 7) of gi-1427...    28  5.7
GI-14277709_1 gi-14277709_1.seq Continuation (1 of 7) of gi-1427...    28  5.7
GI-10383748 gi|10383748|ref|NC_001135.2| Saccharomyces cerevisia...    28  5.7
GI-7276232_5 gi-7276232_5.seq Continuation (5 of 6) of gi-727623...    27  7.8
GI-14627172_6 gi-14627172_6.seq Continuation (6 of 8) of gi-1462...    27  7.8
GI-14270686_5 gi-14270686_5.seq Continuation (5 of 9) of gi-1427...    27  7.8
GI-14270686_4 gi-14270686_4.seq Continuation (4 of 9) of gi-1427...    27  7.8

>GI-14318434_11 gi-14318434_11.seq Continuation (11 of 11) of
             gi-14318434 from base 1000001
          Length = 90937

 Score = 33.6 bits (67), Expect = 0.092
 Identities = 16/45 (35%), Positives = 26/45 (57%)
 Frame = -2 / -1

                                                          
Query: 637   TQSEKERRKKESRATRSTQDPQRKKEQSKRGGGKKRGHQEAVAQN 503
             T+S ++ RKK  R  RS ++ +RK+   +R  G+KR  +    QN
Sbjct: 51184 TKSIRKTRKKTRRTKRSIRNIKRKRRD*RRKKGRKRPKKRKRRQN 51050


>GI-14318439_11 gi-14318439_11.seq Continuation (11 of 11) of
             gi-14318439 from base 1000001
          Length = 91284

 Score = 33.1 bits (66), Expect = 0.13
 Identities = 10/26 (38%), Positives = 13/26 (49%)
 Frame = -3 / -1

                                       
Query: 285   CCRITWQPLACHICDWTYGIGLHCCR 208
             CC   WQPL  H+  W+  I    C+
Sbjct: 58536 CCLAFWQPLRIHLICWSLKISAFACK 58459


 Score = 27.2 bits (53), Expect = 7.8
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +3 / +1

                             
Query: 681   RSLPPFFVLSLFCCFY 728
             R  P  FVL LFCCF+
Sbjct: 36568 RLCPICFVLFLFCCFF 36615


>GI-7839148_01 gi-7839148_01.seq Continuation (1 of 16) of gi-7839148
             from base 1
          Length = 110000

 Score = 30.4 bits (60), Expect = 0.85
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -3 / +2

                                             
Query: 312   EIWASGWQHCCRITWQPLACHICDWTYGIGLH 217
             EIW     H   I W   + + CDWT G+  H
Sbjct: 90464 EIWRDFLGHW*VIWWHIFSVNRCDWTNGLRSH 90559


>GI-6862570_3 gi-6862570_3.seq Continuation (3 of 6) of gi-6862570 from
             base 200001
          Length = 110000

 Score = 29.9 bits (59), Expect = 1.2
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -1 / -1

                                       
Query: 137   CPTAQRRWSPRGQ*ERG*TCLHGGWL 60
             C ++   WSP G   +  TC HG W+
Sbjct: 36233 CNSSSVTWSPGGYFSKQCTCTHGIWM 36156


>GI-14627172_2 gi-14627172_2.seq Continuation (2 of 8) of gi-14627172
             from base 100001
          Length = 110000

 Score = 29.9 bits (59), Expect = 1.2
 Identities = 11/27 (40%), Positives = 19/27 (69%)
 Frame = -2 / +1

                                        
Query: 631   SEKERRKKESRATRSTQDPQRKKEQSK 551
             SEK+++KKE R  R  +D + KK++ +
Sbjct: 40750 SEKKKKKKEKREKREKKDKKDKKKKHR 40830


>GI-14318439_08 gi-14318439_08.seq Continuation (8 of 11) of gi-14318439
             from base 700001
          Length = 110000

 Score = 29.5 bits (58), Expect = 1.6
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = +3 / +3

                                     
Query: 783   *IYSWYHRPLADWERRVGCVARGD 854
             *IY W H PL  W+ R   VA  D
Sbjct: 53979 *IYPWSHLPLPSWQLRYLLVAETD 54050


>GI-14389432_07 gi-14389432_07.seq Continuation (7 of 11) of gi-14389432
             from base 600001
          Length = 110000

 Score = 28.6 bits (56), Expect = 3.0
 Identities = 12/28 (42%), Positives = 15/28 (52%)
 Frame = +3 / +2

                                         
Query: 642   AWPASFSRSSVVCRSLPPFFVLSLFCCF 725
             +W  SFS SS         F+L LFCC+
Sbjct: 44744 SWIFSFSNSSTCISKSVICFLLHLFCCW 44827


>GI-14318439_04 gi-14318439_04.seq Continuation (4 of 11) of gi-14318439
             from base 300001
          Length = 110000

 Score = 28.6 bits (56), Expect = 3.0
 Identities = 10/19 (52%), Positives = 12/19 (62%)
 Frame = +3 / -2

                                
Query: 669   SVVCRSLPPFFVLSLFCCF 725
             +V C  LP FF L + CCF
Sbjct: 60001 NVACPKLPHFFELVMNCCF 59945


>GI-14318434_03 gi-14318434_03.seq Continuation (3 of 11) of gi-14318434
             from base 200001
          Length = 110000

 Score = 28.6 bits (56), Expect = 3.0
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -3 / +1

                                  
Query: 318   CSEIWASGWQHCCRITWQPLA 256
             C   W+ G+  CC + W+P++
Sbjct: 71986 C*RYWSRGYGSCC*LRWRPVS 72048


>GI-6323989_2 gi-6323989_2.seq Continuation (2 of 8) of gi-6323989 from
             base 100001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.2
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = +2 / +3

                                                         
Query: 443   VGITRMVLQTLPSACSLIFSILRHRLLVSPFFTPSTFALFFLSL 574
             V + R +L T+   C L   IL H LL  PF       L+F  L
Sbjct: 58863 VKLPRTILVTV*LQCGLYQVILHHELLNVPFHFLGKHHLYFRQL 58994


>GI-14389432_08 gi-14389432_08.seq Continuation (8 of 11) of gi-14389432
             from base 700001
          Length = 110000

 Score = 27.2 bits (53), Expect(2) = 5.0
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +3 / +1

                             
Query: 693   PFFVLSLFCCFYRFAL 740
             PFF L   C FY FAL
Sbjct: 51289 PFFFLDRLCHFYNFAL 51336


 Score = 18.0 bits (33), Expect(2) = 5.0
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +3 / +1

                            
Query: 657   FSRSSVVCRSLPPFF 701
             F +  ++C  LP FF
Sbjct: 51256 FVQYPILCLKLPFFF 51300


>GI-6319247 gi|6319247|ref|NC_001133.1| Saccharomyces cerevisiae
             chromosome I, complete chro
          Length = 230203

 Score = 27.6 bits (54), Expect = 5.7
 Identities = 10/34 (29%), Positives = 20/34 (58%)
 Frame = -2 / +1

                                               
Query: 619   RRKKESRATRSTQDPQRKKEQSKRGGGKKRGHQE 518
             + KKE    +  ++ Q+KKEQ+ R   +++  +E
Sbjct: 76693 KSKKEKEKEKKEKEKQKKKEQAARKKAQQQAQKE 76794


 Score = 27.2 bits (53), Expect = 7.8
 Identities = 10/29 (34%), Positives = 16/29 (54%)
 Frame = -2 / +1

                                          
Query: 637   TQSEKERRKKESRATRSTQDPQRKKEQSK 551
             ++ EKE+ KKE    +  +   RKK Q +
Sbjct: 76696 SKKEKEKEKKEKEKQKKKEQAARKKAQQQ 76782


 Score = 27.2 bits (53), Expect = 7.8
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3 / +3

                                   
Query: 786   IYSWYHRPLADWERRVGCVARG 851
             ++ WYHR      R +GC  +G
Sbjct: 71850 LHHWYHRSKDQQPRNLGCFEKG 71915


 Score = 24.4 bits (47), Expect(2) = 9.9
 Identities = 7/16 (43%), Positives = 10/16 (61%)
 Frame = -3 / +1

                              
Query: 345    TLQTAWHRACSEIWAS 298
              T +TAW   CS  W++
Sbjct: 139555 TWETAWSTTCSATWST 139602


 Score = 19.4 bits (36), Expect(2) = 9.9
 Identities = 5/8 (62%), Positives = 6/8 (74%)
 Frame = -3 / +3

                      
Query: 294    WQHCCRIT 271
              WQ CC +T
Sbjct: 139683 WQWCCCLT 139706


>GI-6324971_09 gi-6324971_09.seq Continuation (9 of 10) of gi-6324971
             from base 800001
          Length = 110000

 Score = 27.6 bits (54), Expect = 5.7
 Identities = 8/18 (44%), Positives = 11/18 (60%)
 Frame = -2 / -1

                               
Query: 526   HQEAVAQNGENQGAGRWK 473
             H     + GE++ AGRWK
Sbjct: 76967 HSTQPVKEGEDERAGRWK 76914


>GI-14277709_6 gi-14277709_6.seq Continuation (6 of 7) of gi-14277709
             from base 500001
          Length = 110000

 Score = 27.6 bits (54), Expect = 5.7
 Identities = 7/16 (43%), Positives = 9/16 (55%)
 Frame = -3 / +2

                             
Query: 327   HRACSEIWASGWQHCC 280
             HR C   W++GW   C
Sbjct: 14996 HRWCHRYWSAGWVRYC 15043


>GI-14277709_1 gi-14277709_1.seq Continuation (1 of 7) of gi-14277709
             from base 1
          Length = 110000

 Score = 27.6 bits (54), Expect = 5.7
 Identities = 10/34 (29%), Positives = 20/34 (58%)
 Frame = -2 / -2

                                               
Query: 634   QSEKERRKKESRATRSTQDPQRKKEQSKRGGGKK 533
             +  + R+KK+ +  +  +  +RKK++ KR   KK
Sbjct: 64297 RKRRRRKKKKRKRRKRKRRKRRKKKRRKRRKKKK 64196


 Score = 27.2 bits (53), Expect = 7.8
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -2 / -2

                                            
Query: 625   KERRKKESRATRSTQDPQRKKEQSKRGGGKK 533
             + RRKK  R  R  +  +R+K + ++   KK
Sbjct: 64315 RRRRKKRKRRRRKKKKRKRRKRKRRKRRKKK 64223


 Score = 27.2 bits (53), Expect = 7.8
 Identities = 10/34 (29%), Positives = 20/34 (58%)
 Frame = -2 / -2

                                               
Query: 634   QSEKERRKKESRATRSTQDPQRKKEQSKRGGGKK 533
             +  ++RRKK+ R  R  +  + ++++ KR   KK
Sbjct: 64252 RKRRKRRKKKRRKRRKKKKRRSRRKRRKRRRKKK 64151


>GI-10383748 gi|10383748|ref|NC_001135.2| Saccharomyces cerevisiae
             chromosome III, complete c
          Length = 316613

 Score = 27.6 bits (54), Expect = 5.7
 Identities = 14/37 (37%), Positives = 16/37 (42%)
 Frame = -1 / -1

                                                  
Query: 317   APRSGPAAGSTVAASPGNRLPATSVTGHMV*GCTAAG 207
             A    PAA     ASP   +  T   G +V GC A G
Sbjct: 41696 AAPKAPAAMVLTTASPIETVVVTEAVGRVVFGCVAFG 41586


>GI-7276232_5 gi-7276232_5.seq Continuation (5 of 6) of gi-7276232 from
             base 400001
          Length = 110000

 Score = 27.2 bits (53), Expect = 7.8
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3 / -3

                       
Query: 303   ASGWQHCCRI 274
             A GWQ+CCR+
Sbjct: 62826 AQGWQYCCRL 62797


>GI-14627172_6 gi-14627172_6.seq Continuation (6 of 8) of gi-14627172
             from base 500001
          Length = 110000

 Score = 27.2 bits (53), Expect = 7.8
 Identities = 12/46 (26%), Positives = 17/46 (36%)
 Frame = -3 / -1

                                                           
Query: 342   LQTAWHRACSEIWASGWQHCCRITWQPLACHICDWTYGIGLHCCRR 205
             ++  W R  ++  A G   CC   W       C W  G+    C R
Sbjct: 27221 VRIVW*RLINDRCAGGRTDCCYSDWVHGLFFECRWVIGMPNRQCNR 27084


>GI-14270686_5 gi-14270686_5.seq Continuation (5 of 9) of gi-14270686
             from base 400001
          Length = 110000

 Score = 27.2 bits (53), Expect = 7.8
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -2 / -2

                                      
Query: 577   PQRKKEQSKRGGGKKRGHQEAVAQN 503
             P  KKE+ + G GK+R +++   +N
Sbjct: 52465 PAAKKERKREGSGKRRRYEKKKKKN 52391


>GI-14270686_4 gi-14270686_4.seq Continuation (4 of 9) of gi-14270686
             from base 300001
          Length = 110000

 Score = 27.2 bits (53), Expect = 7.8
 Identities = 7/25 (28%), Positives = 16/25 (64%)
 Frame = -1 / -1

                                      
Query: 713   KRENEKGGKRATHDGGTRERSRPRP 639
             +RE+ +GG+   H    ++R++ +P
Sbjct: 39479 RREHLRGGQSKIHKRAEKKRNKKKP 39405


  Database: /home/pmiguel/yeast/yeast
    Posted date:  Oct 27, 2001  2:26 PM
  Number of letters in database: 13,206,306
  Number of sequences in database:  122
  
Lambda     K      H
   0.318    0.135    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 21207907
Number of Sequences: 122
Number of extensions: 258983
Number of successful extensions: 17566
Number of sequences better than 10.0: 20
length of query: 288
length of database: 4,402,102
effective HSP length: 44
effective length of query: 244
effective length of database: 4,396,734
effective search space: 1072803096
effective search space used: 1072803096
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 52 (26.7 bits)