TBLASTX 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCPvsSce/blast/0941_C08_E15ZS5.seq
         (897 letters)

Database: /home/pmiguel/yeast/yeast
           122 sequences; 13,206,306 total letters

Searching............................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

GI-6323989_3 gi-6323989_3.seq Continuation (3 of 8) of gi-632398...    32  0.34
GI-14277709_2 gi-14277709_2.seq Continuation (2 of 7) of gi-1427...    30  0.88
GI-14627172_4 gi-14627172_4.seq Continuation (4 of 8) of gi-1462...    30  1.2
GI-14389432_10 gi-14389432_10.seq Continuation (10 of 11) of gi-...    30  1.2
GI-14389432_09 gi-14389432_09.seq Continuation (9 of 11) of gi-1...    30  1.2
GI-14318439_02 gi-14318439_02.seq Continuation (2 of 11) of gi-1...    29  1.7
GI-14318434_04 gi-14318434_04.seq Continuation (4 of 11) of gi-1...    29  1.7
GI-6323989_8 gi-6323989_8.seq Continuation (8 of 8) of gi-632398...    29  2.3
GI-6324971_05 gi-6324971_05.seq Continuation (5 of 10) of gi-632...    28  4.3
GI-7839148_11 gi-7839148_11.seq Continuation (11 of 16) of gi-78...    28  5.9
GI-6324971_07 gi-6324971_07.seq Continuation (7 of 10) of gi-632...    28  5.9
GI-6323989_2 gi-6323989_2.seq Continuation (2 of 8) of gi-632398...    28  5.9
GI-6323501_07 gi-6323501_07.seq Continuation (7 of 10) of gi-632...    28  5.9
GI-14318439_09 gi-14318439_09.seq Continuation (9 of 11) of gi-1...    28  5.9
GI-6862570_6 gi-6862570_6.seq Continuation (6 of 6) of gi-686257...    27  8.2
GI-7839148_08 gi-7839148_08.seq Continuation (8 of 16) of gi-783...    27  8.2
GI-6862570_4 gi-6862570_4.seq Continuation (4 of 6) of gi-686257...    27  8.2
GI-6323989_7 gi-6323989_7.seq Continuation (7 of 8) of gi-632398...    27  8.2
GI-14627172_6 gi-14627172_6.seq Continuation (6 of 8) of gi-1462...    27  8.2
GI-14318439_06 gi-14318439_06.seq Continuation (6 of 11) of gi-1...    27  8.2
GI-14270686_4 gi-14270686_4.seq Continuation (4 of 9) of gi-1427...    27  8.2
GI-7839148_14 gi-7839148_14.seq Continuation (14 of 16) of gi-78...    23  8.9

>GI-6323989_3 gi-6323989_3.seq Continuation (3 of 8) of gi-6323989 from
             base 200001
          Length = 110000

 Score = 31.8 bits (63), Expect = 0.34
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +1 / -2

                                    
Query: 262   ISH*CCQRTHTTPCDPSWCTRPC 330
             I H C +RT   PCD  + TRPC
Sbjct: 40717 IFHDCPKRT*LDPCDLEYTTRPC 40649


 Score = 29.9 bits (59), Expect = 1.2
 Identities = 11/19 (57%), Positives = 13/19 (67%)
 Frame = +1 / +3

                                
Query: 724   LPFFPHSFLTXFFQWDPC* 780
             L +F HSF+T   QW PC*
Sbjct: 10782 LHYFVHSFMTI*LQWIPC* 10838


>GI-14277709_2 gi-14277709_2.seq Continuation (2 of 7) of gi-14277709
             from base 100001
          Length = 110000

 Score = 30.4 bits (60), Expect = 0.88
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -1 / -1

                                   
Query: 783   YLAGIPLKKXGQKGMWKKRQRI 718
             Y  GIPLKK G +G  K+ ++I
Sbjct: 11333 YFGGIPLKKYGSRGRTKRIEKI 11268


 Score = 27.6 bits (54), Expect = 5.9
 Identities = 14/32 (43%), Positives = 17/32 (52%)
 Frame = -1 / -3

                                             
Query: 771   IPLKKXGQKGMWKKRQRILSREKTLLFSEGEE 676
             IPLKK    G W KR+  +S     L SE +E
Sbjct: 76122 IPLKKVHGFGPWMKRRNYISM*MKKLDSESKE 76027


>GI-14627172_4 gi-14627172_4.seq Continuation (4 of 8) of gi-14627172
             from base 300001
          Length = 110000

 Score = 29.9 bits (59), Expect = 1.2
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -1 / +3

                                               
Query: 702   TLLFSEGEESKNGGGQESVCQVPEPGHQIVPMSS 601
             ++LFS    SKN G  +++C     G +I+ +SS
Sbjct: 10077 SILFSSSSRSKNIGEPKTICLSNSVGKEIISISS 10178


 Score = 27.2 bits (53), Expect = 8.2
 Identities = 10/24 (41%), Positives = 13/24 (53%)
 Frame = +1 / +1

                                     
Query: 313   WCTRPCTCRCQRELGCLSLFQPPS 384
             W  + C  R Q++L C  LFQ P 
Sbjct: 95725 WTRQLC*VRQQKQLFCSHLFQ*PC 95796


>GI-14389432_10 gi-14389432_10.seq Continuation (10 of 11) of
             gi-14389432 from base 900001
          Length = 110000

 Score = 29.9 bits (59), Expect = 1.2
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +3 / +1

                                              
Query: 330   YMPLSARTGLSIIISTSEPTDLKLQ*LRYMINL 428
             ++PLS  T ++III     TDLKL  L Y   L
Sbjct: 24940 HLPLSPATAIAIIICFRIVTDLKLSRLTYAFYL 25038


>GI-14389432_09 gi-14389432_09.seq Continuation (9 of 11) of gi-14389432
             from base 800001
          Length = 110000

 Score = 29.9 bits (59), Expect = 1.2
 Identities = 11/30 (36%), Positives = 19/30 (62%)
 Frame = +2 / +2

                                           
Query: 458   ILGKHNLSAPMTSYSRPEVMVKSQSYFFTH 547
             + G+H+ SA   S+S    + K ++Y+FTH
Sbjct: 33311 LTGEHSSSASFLSFSHFNHLHKRKNYYFTH 33400


>GI-14318439_02 gi-14318439_02.seq Continuation (2 of 11) of gi-14318439
             from base 100001
          Length = 110000

 Score = 29.5 bits (58), Expect = 1.7
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +3 / +2

                                
Query: 15    CSTGSSCFNTIVMVHHFPF 71
             CS  SSCFNT++ + +F +
Sbjct: 62069 CSQPSSCFNTLISLKYFKY 62125


>GI-14318434_04 gi-14318434_04.seq Continuation (4 of 11) of gi-14318434
             from base 300001
          Length = 110000

 Score = 29.5 bits (58), Expect = 1.7
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +1 / -2

                                        
Query: 274   CCQRTHTTPCDPSWCTRPCTCRCQREL 354
             C +    T C+PS    P T RC+REL
Sbjct: 84106 CSRNVSHTSCEPSSRYDPPTFRCKREL 84026


>GI-6323989_8 gi-6323989_8.seq Continuation (8 of 8) of gi-6323989 from
             base 700001
          Length = 84328

 Score = 29.0 bits (57), Expect = 2.3
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1 / +1

                             
Query: 301   CDPSWCTRPCTCRCQR 348
             C   W +R C CRC+R
Sbjct: 58249 CPIRWVSRACCCRCER 58296


>GI-6324971_05 gi-6324971_05.seq Continuation (5 of 10) of gi-6324971
             from base 400001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.3
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1 / -2

                            
Query: 340   CQRELGCLSLFQPPS 384
             C R+ GCL L+ PPS
Sbjct: 10360 CNRKFGCL*LYSPPS 10316


>GI-7839148_11 gi-7839148_11.seq Continuation (11 of 16) of gi-7839148
             from base 1000001
          Length = 110000

 Score = 27.6 bits (54), Expect = 5.9
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +1 / +1

                      
Query: 301   CDPSWCTRP 327
             CDPSW TRP
Sbjct: 71701 CDPSWSTRP 71727


 Score = 27.2 bits (53), Expect = 8.2
 Identities = 10/23 (43%), Positives = 15/23 (64%)
 Frame = +2 / -2

                                    
Query: 767   GIPARYWFLSRLLEFPPLGSLMV 835
             G   R W L+ +++FP LGSL +
Sbjct: 61048 GFIIRNWILN*VVQFPTLGSLSI 60980


>GI-6324971_07 gi-6324971_07.seq Continuation (7 of 10) of gi-6324971
             from base 600001
          Length = 110000

 Score = 27.6 bits (54), Expect = 5.9
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = +2 / -2

                                        
Query: 815   PLGSLMVWFYCSIGLPLQNPLCSNVII 895
             P+  +++W  CS+ LP +N L  +V++
Sbjct: 37897 PVVDMIIWSTCSLKLPAKNLLKFHVLV 37817


>GI-6323989_2 gi-6323989_2.seq Continuation (2 of 8) of gi-6323989 from
             base 100001
          Length = 110000

 Score = 27.6 bits (54), Expect = 5.9
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +1 / +3

                                                     
Query: 280   QRTHTTPCDPSWCTRPCTCRCQRELGCLSLFQPPSPQI*N 399
             Q+   TP  PS   RP     Q + G    ++PP+PQ+ N
Sbjct: 16251 QQPWPTPNSPSAHYRPPPNLNQPQNGSAGYYRPPAPQLQN 16370


>GI-6323501_07 gi-6323501_07.seq Continuation (7 of 10) of gi-6323501
             from base 600001
          Length = 110000

 Score = 27.6 bits (54), Expect = 5.9
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +3 / +1

                                          
Query: 525   PSHTFLLTP*MQWPLHKQPKVSLSSSYSL 611
             P H  LL P*+Q P+H Q    L +   L
Sbjct: 98173 PHHNHLLAP*LQAPVHLQALAHLQAPVHL 98259


>GI-14318439_09 gi-14318439_09.seq Continuation (9 of 11) of gi-14318439
             from base 800001
          Length = 110000

 Score = 27.6 bits (54), Expect = 5.9
 Identities = 10/21 (47%), Positives = 15/21 (70%)
 Frame = +1 / -2

                                  
Query: 580   QRFHFQAATHWHNLVTRFWHL 642
             +RFHF    H+H+++TR  HL
Sbjct: 15619 RRFHFLQQ*HYHHILTRPPHL 15557


>GI-6862570_6 gi-6862570_6.seq Continuation (6 of 6) of gi-6862570 from
             base 500001
          Length = 62639

 Score = 27.2 bits (53), Expect = 8.2
 Identities = 9/21 (42%), Positives = 11/21 (51%)
 Frame = +3 / +3

                                  
Query: 798   GYWSSLLWVHLWCGSIVQSVC 860
             G W   +WV +WCG     VC
Sbjct: 56871 GVWVWCVWVWVWCGCGCVWVC 56933


>GI-7839148_08 gi-7839148_08.seq Continuation (8 of 16) of gi-7839148
             from base 700001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.2
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -1 / +2

                                         
Query: 780   LAGIPLKKXGQKGMWKKRQRILSREKTL 697
             L    L++  ++G WKKR R L   K L
Sbjct: 32486 LGSTRLERKERRGHWKKRLRFLKESKKL 32569


>GI-6862570_4 gi-6862570_4.seq Continuation (4 of 6) of gi-6862570 from
             base 300001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3 / -3

                           
Query: 24    GSSCFNTIVMVHHF 65
             GS CF T++ +HH+
Sbjct: 52695 GSECFLTVINIHHY 52654


>GI-6323989_7 gi-6323989_7.seq Continuation (7 of 8) of gi-6323989 from
             base 600001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.2
 Identities = 9/17 (52%), Positives = 11/17 (63%)
 Frame = +1 / -2

                              
Query: 577   SQRFHFQAATHWHNLVT 627
             +Q FH Q A+HW  L T
Sbjct: 76708 TQHFHLQVASHWSQL*T 76658


>GI-14627172_6 gi-14627172_6.seq Continuation (6 of 8) of gi-14627172
             from base 500001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.2
 Identities = 11/23 (47%), Positives = 13/23 (55%)
 Frame = +1 / +1

                                    
Query: 79    KDFCLRSTKDE*GCSYSSKDHSR 147
             +DF LR+ K   G    SKDH R
Sbjct: 56134 RDFLLRAAKTSLGSKIVSKDHDR 56202


>GI-14318439_06 gi-14318439_06.seq Continuation (6 of 11) of gi-14318439
             from base 500001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.2
 Identities = 8/22 (36%), Positives = 13/22 (58%)
 Frame = +1 / -3

                                   
Query: 310   SWCTRPCTCRCQRELGCLSLFQ 375
             +W +  CTC     +GC+SL +
Sbjct: 17043 TWSSAICTCVVSAMIGCISLLE 16978


>GI-14270686_4 gi-14270686_4.seq Continuation (4 of 9) of gi-14270686
             from base 300001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.2
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = -1 / +3

                                              
Query: 618   IVPMSSCLKVKPLAVCVTAIAFTE*VKKYDWDF 520
             I P + CL +  L++  + + FTE    ++W+F
Sbjct: 11622 INPYTICLYISYLSMIASILKFTELQFSFNWEF 11720


>GI-7839148_14 gi-7839148_14.seq Continuation (14 of 16) of gi-7839148
             from base 1300001
          Length = 110000

 Score = 22.6 bits (43), Expect(2) = 8.9
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +1 / -3

                         
Query: 463   WEAQFVCTHDFL 498
             WE+ ++CT+ FL
Sbjct: 52128 WESGWICTNTFL 52093


 Score = 21.7 bits (41), Expect(2) = 8.9
 Identities = 5/10 (50%), Positives = 7/10 (70%)
 Frame = +1 / -3

                       
Query: 304   DPSWCTRPCT 333
             DP WC+  C+
Sbjct: 52212 DPKWCSTMCS 52183


  Database: /home/pmiguel/yeast/yeast
    Posted date:  Oct 27, 2001  2:26 PM
  Number of letters in database: 13,206,306
  Number of sequences in database:  122
  
Lambda     K      H
   0.318    0.135    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 27793643
Number of Sequences: 122
Number of extensions: 425991
Number of successful extensions: 23560
Number of sequences better than 10.0: 22
length of query: 299
length of database: 4,402,102
effective HSP length: 44
effective length of query: 254
effective length of database: 4,396,734
effective search space: 1116770436
effective search space used: 1116770436
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 53 (27.2 bits)