TBLASTX 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCPvsSce/blast/0941_C11_E21ZS5.seq
         (914 letters)

Database: /home/pmiguel/yeast/yeast
           122 sequences; 13,206,306 total letters

Searching............................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

GI-6322016_3 gi-6322016_3.seq Continuation (3 of 5) of gi-632201...    58  1e-09
GI-14277709_2 gi-14277709_2.seq Continuation (2 of 7) of gi-1427...    52  3e-07
GI-6323501_01 gi-6323501_01.seq Continuation (1 of 10) of gi-632...    40  8e-04
GI-14277709_7 gi-14277709_7.seq Continuation (7 of 7) of gi-1427...    30  1.2
GI-6323501_06 gi-6323501_06.seq Continuation (6 of 10) of gi-632...    30  1.2
GI-14277709_6 gi-14277709_6.seq Continuation (6 of 7) of gi-1427...    30  1.2
GI-14627172_1 gi-14627172_1.seq Continuation (1 of 8) of gi-1462...    29  2.3
GI-6319247 gi|6319247|ref|NC_001133.1| Saccharomyces cerevisiae ...    25  2.8
GI-14318434_09 gi-14318434_09.seq Continuation (9 of 11) of gi-1...    29  3.2
GI-6862570_4 gi-6862570_4.seq Continuation (4 of 6) of gi-686257...    28  4.4
GI-6323989_1 gi-6323989_1.seq Continuation (1 of 8) of gi-632398...    28  4.4
GI-14627172_3 gi-14627172_3.seq Continuation (3 of 8) of gi-1462...    28  4.4
GI-14318434_04 gi-14318434_04.seq Continuation (4 of 11) of gi-1...    28  4.4
GI-14318434_03 gi-14318434_03.seq Continuation (3 of 11) of gi-1...    28  4.4
GI-14627172_4 gi-14627172_4.seq Continuation (4 of 8) of gi-1462...    28  6.1
GI-14318439_08 gi-14318439_08.seq Continuation (8 of 11) of gi-1...    28  6.1
GI-14270686_1 gi-14270686_1.seq Continuation (1 of 9) of gi-1427...    28  6.1
GI-14318439_04 gi-14318439_04.seq Continuation (4 of 11) of gi-1...    24  7.0
GI-14318439_03 gi-14318439_03.seq Continuation (3 of 11) of gi-1...    24  7.0
GI-7839148_15 gi-7839148_15.seq Continuation (15 of 16) of gi-78...    27  8.4
GI-7839148_12 gi-7839148_12.seq Continuation (12 of 16) of gi-78...    27  8.4
GI-7839148_07 gi-7839148_07.seq Continuation (7 of 16) of gi-783...    27  8.4
GI-6324971_01 gi-6324971_01.seq Continuation (1 of 10) of gi-632...    27  8.4
GI-14627172_7 gi-14627172_7.seq Continuation (7 of 8) of gi-1462...    27  8.4
GI-14389432_06 gi-14389432_06.seq Continuation (6 of 11) of gi-1...    27  8.4
GI-14318439_09 gi-14318439_09.seq Continuation (9 of 11) of gi-1...    27  8.4
GI-14318434_01 gi-14318434_01.seq Continuation (1 of 11) of gi-1...    27  8.4
GI-14627172_8 gi-14627172_8.seq Continuation (8 of 8) of gi-1462...    27  8.4

>GI-6322016_3 gi-6322016_3.seq Continuation (3 of 5) of gi-6322016 from
             base 200001
          Length = 110000

 Score = 57.9 bits (120), Expect(2) = 1e-09
 Identities = 22/39 (56%), Positives = 29/39 (73%)
 Frame = +1 / -3

                                                    
Query: 271   NFRKFKLVEKTQISHNVAKFRFALPTPTSVLGLPIGQHI 387
             +F+ F LVEKT ++HN + ++F LP    VLGLPIGQHI
Sbjct: 74811 DFQSFPLVEKTILTHNTSMYKFGLPHADDVLGLPIGQHI 74695


 Score = 35.4 bits (71), Expect(2) = 0.010
 Identities = 17/35 (48%), Positives = 21/35 (59%)
 Frame = -1 / +2

                                                
Query: 386   IC*PIGRPNTEVGVGRANRNLATLWLICVFSTSLN 282
             IC*PIG+P+T    G  N  +  L +  VFSTS N
Sbjct: 74696 IC*PIGKPSTSSA*GSPNLYIEVLCVKMVFSTSGN 74800


 Score = 21.2 bits (40), Expect(2) = 1e-09
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +1 / -3

                       
Query: 463   GNFQLCFKMY 492
             GNF+L  K Y
Sbjct: 74619 GNFELLVKSY 74590


 Score = 19.8 bits (37), Expect(2) = 0.010
 Identities = 5/5 (100%), Positives = 5/5 (100%)
 Frame = -3 / +1

                  
Query: 387   DMLTN 373
             DMLTN
Sbjct: 74695 DMLTN 74709


>GI-14277709_2 gi-14277709_2.seq Continuation (2 of 7) of gi-14277709
             from base 100001
          Length = 110000

 Score = 51.9 bits (107), Expect = 3e-07
 Identities = 22/61 (36%), Positives = 33/61 (54%)
 Frame = +1 / +3

                                                                         
Query: 310   SHNVAKFRFALPTPTSVLGLPIGQHISCRGQDATGEELIKPYTPTTLDSDLGNFQLCFKM 489
             SH+  +F F LPT  S +GL +   +  +     G  +++PYTP +  S  G+FQL  K 
Sbjct: 66738 SHDTRRFTFKLPTEDSEMGLVLASALFAKFVTPKGSNVVRPYTPVSDLSQKGHFQLVVKH 66917

              
Query: 490   Y 492
             Y
Sbjct: 66918 Y 66920


>GI-6323501_01 gi-6323501_01.seq Continuation (1 of 10) of gi-6323501
             from base 1
          Length = 110000

 Score = 40.5 bits (82), Expect = 8e-04
 Identities = 17/46 (36%), Positives = 26/46 (55%)
 Frame = +1 / -2

                                                           
Query: 259   LDPENFRKFKLVEKTQISHNVAKFRFALPTPTSVLGLPIGQHISCR 396
             L P+ +   +L ++T IS N A +RF L T    L +P G H++ R
Sbjct: 21502 LYPDRWTSLELEDQTIISKNTALYRFKLKTRLESLDIPAGHHVAVR 21365


>GI-14277709_7 gi-14277709_7.seq Continuation (7 of 7) of gi-14277709
            from base 600001
          Length = 66445

 Score = 29.9 bits (59), Expect = 1.2
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1 / +2

                          
Query: 574  FRHLYFSNSFCWIC 615
            FRH+ +S S CW+C
Sbjct: 2915 FRHILYSTSACWMC 2956


>GI-6323501_06 gi-6323501_06.seq Continuation (6 of 10) of gi-6323501
             from base 500001
          Length = 110000

 Score = 29.9 bits (59), Expect = 1.2
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -3 / +3

                                        
Query: 471   KISKIRIQCSRCVRLD*FFTGSILTSA 391
             K ++IR+ C RCV  D*F  G +  S+
Sbjct: 45504 KSNRIRVCCYRCVEQD*FSGGQVRASS 45584


>GI-14277709_6 gi-14277709_6.seq Continuation (6 of 7) of gi-14277709 from
              base 500001
          Length = 110000

 Score = 29.9 bits (59), Expect = 1.2
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1 / +3

                            
Query: 574    FRHLYFSNSFCWIC 615
              FRH+ +S S CW+C
Sbjct: 102915 FRHILYSTSACWMC 102956


>GI-14627172_1 gi-14627172_1.seq Continuation (1 of 8) of gi-14627172
             from base 1
          Length = 110000

 Score = 29.0 bits (57), Expect = 2.3
 Identities = 15/30 (50%), Positives = 17/30 (56%)
 Frame = +3 / -1

                                           
Query: 522   NYICDFFF*LDLWSFTSISTLILFEFFLLD 611
             NYIC F F    + F  I+T ILFE  L D
Sbjct: 85433 NYICFF*FFFKNYIFVYINTRILFETKLQD 85344


>GI-6319247 gi|6319247|ref|NC_001133.1| Saccharomyces cerevisiae
              chromosome I, complete chro
          Length = 230203

 Score = 25.3 bits (49), Expect(2) = 2.8
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +3 / +2

                              
Query: 51     PPARAPNQPTPAPSVA 98
              P AR P +PT APS A
Sbjct: 192728 PAARRPKRPTSAPSHA 192775


 Score = 20.8 bits (39), Expect(2) = 2.8
 Identities = 5/9 (55%), Positives = 6/9 (66%)
 Frame = +1 / +2

                       
Query: 229    LCRSKMPKG 255
              LCR+  P G
Sbjct: 192779 LCRASRPHG 192805


>GI-14318434_09 gi-14318434_09.seq Continuation (9 of 11) of gi-14318434
             from base 800001
          Length = 110000

 Score = 28.6 bits (56), Expect = 3.2
 Identities = 12/27 (44%), Positives = 16/27 (58%)
 Frame = -1 / +2

                                        
Query: 347   VGRANRNLATLWLICVFSTSLNFLKFS 267
             V  A+R+   L   C+F +S NFL FS
Sbjct: 36437 VSNASRSFLALAFSCLFCSSSNFLAFS 36517


>GI-6862570_4 gi-6862570_4.seq Continuation (4 of 6) of gi-6862570 from
             base 300001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.4
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1 / +1

                               
Query: 385   ISCRGQDATGEELIKPYT 438
             + CR  D +G + IKPYT
Sbjct: 52594 VVCRANDISGNKTIKPYT 52647


>GI-6323989_1 gi-6323989_1.seq Continuation (1 of 8) of gi-6323989 from
             base 1
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.4
 Identities = 10/22 (45%), Positives = 13/22 (58%)
 Frame = +3 / +1

                                   
Query: 345   NPYLCVRPSNWSTYQLQRSRCY 410
             +PY  V P  WS   L RS+C+
Sbjct: 63661 DPYRSV*PLLWSFLDLSRSKCF 63726


>GI-14627172_3 gi-14627172_3.seq Continuation (3 of 8) of gi-14627172
             from base 200001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.4
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3 / -2

                                   
Query: 507   SLTS*NYICDFFF*LDLWSFTS 572
             SL    ++CDF F L+++SFTS
Sbjct: 98290 SLLEGAFVCDFSFDLEVFSFTS 98225


>GI-14318434_04 gi-14318434_04.seq Continuation (4 of 11) of
            gi-14318434 from base 300001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.4
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -1 / -1

                                     
Query: 323  ATLWLICVFSTSLNFLKFSGSKQPL 249
            A L     F++SLNFL+ S S  PL
Sbjct: 7994 AFLAAFLAFASSLNFLRVSSSGLPL 7920


>GI-14318434_03 gi-14318434_03.seq Continuation (3 of 11) of gi-14318434
              from base 200001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.4
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -1 / -3

                                       
Query: 323    ATLWLICVFSTSLNFLKFSGSKQPL 249
              A L     F++SLNFL+ S S  PL
Sbjct: 107994 AFLAAFLAFASSLNFLRVSSSGLPL 107920


>GI-14627172_4 gi-14627172_4.seq Continuation (4 of 8) of gi-14627172
             from base 300001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.1
 Identities = 10/17 (58%), Positives = 12/17 (69%)
 Frame = +3 / +1

                              
Query: 39    GHQTPPARAPNQPTPAP 89
             G   PPARAP+Q  P+P
Sbjct: 61018 GPVPPPARAPDQGNPSP 61068


>GI-14318439_08 gi-14318439_08.seq Continuation (8 of 11) of gi-14318439
             from base 700001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.1
 Identities = 10/18 (55%), Positives = 13/18 (71%)
 Frame = +3 / -3

                               
Query: 555   LWSFTSISTLILFEFFLL 608
             LW FTSI  L+LF F ++
Sbjct: 92847 LWRFTSICCLLLFLFLII 92794


>GI-14270686_1 gi-14270686_1.seq Continuation (1 of 9) of gi-14270686
             from base 1
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.1
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = +1 / +3

                            
Query: 502   KCPLLPEITFVIFFF 546
             KCPLL ++ FV+FF+
Sbjct: 10032 KCPLL*KLKFVLFFY 10076


>GI-14318439_04 gi-14318439_04.seq Continuation (4 of 11) of
            gi-14318439 from base 300001
          Length = 110000

 Score = 23.5 bits (45), Expect(2) = 7.0
 Identities = 6/14 (42%), Positives = 11/14 (77%)
 Frame = -1 / +1

                          
Query: 176  MVSTLRPCRKSMAP 135
            M++T + CRK ++P
Sbjct: 5632 MMATAKTCRKLLSP 5673


 Score = 21.2 bits (40), Expect(2) = 7.0
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = -1 / +3

                    
Query: 92   ARGGGWLV 69
            A GG WLV
Sbjct: 5802 ASGGNWLV 5825


>GI-14318439_03 gi-14318439_03.seq Continuation (3 of 11) of gi-14318439
              from base 200001
          Length = 110000

 Score = 23.5 bits (45), Expect(2) = 7.0
 Identities = 6/14 (42%), Positives = 11/14 (77%)
 Frame = -1 / +2

                            
Query: 176    MVSTLRPCRKSMAP 135
              M++T + CRK ++P
Sbjct: 105632 MMATAKTCRKLLSP 105673


 Score = 21.2 bits (40), Expect(2) = 7.0
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = -1 / +1

                      
Query: 92     ARGGGWLV 69
              A GG WLV
Sbjct: 105802 ASGGNWLV 105825


>GI-7839148_15 gi-7839148_15.seq Continuation (15 of 16) of gi-7839148
             from base 1400001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3 / -2

                                 
Query: 45    QTPPARAPNQPTPAPSVARE 104
             Q PP R P  P P P +++E
Sbjct: 16234 QGPPLRRPEVPKPVPELSQE 16175


>GI-7839148_12 gi-7839148_12.seq Continuation (12 of 16) of gi-7839148
             from base 1100001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.4
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -1 / +2

                                       
Query: 611   IQQKEFEKYKCRNRREGPKVQLKKKI 534
             IQQK+  K   R  R GPK+ L++ +
Sbjct: 56240 IQQKQM*KMNLRRTRRGPKLFLREVV 56317


>GI-7839148_07 gi-7839148_07.seq Continuation (7 of 16) of gi-7839148
             from base 600001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1 / +1

                                 
Query: 529   FVIFFFNWTFGPSRLFRHLY 588
             ++  FF  T+ P   F+HLY
Sbjct: 91390 YIYLFFTHTYCPPDYFKHLY 91449


>GI-6324971_01 gi-6324971_01.seq Continuation (1 of 10) of gi-6324971
             from base 1
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.4
 Identities = 10/24 (41%), Positives = 13/24 (53%)
 Frame = -3 / -3

                                     
Query: 105   SPSRRSGRGLVGWVPGLAVFGALR 34
             SPS RSG  ++ W     +FG  R
Sbjct: 45930 SPSARSGHRIIAWKNYFILFGGFR 45859


>GI-14627172_7 gi-14627172_7.seq Continuation (7 of 8) of gi-14627172
             from base 600001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.4
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2 / +2

                                    
Query: 293   WKRHK*AIMLPNSDLLFQPLPLC 361
             WKRHK    LP   ++F P+  C
Sbjct: 57506 WKRHKVLHSLPLIQVIFYPIVRC 57574


>GI-14389432_06 gi-14389432_06.seq Continuation (6 of 11) of gi-14389432
             from base 500001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.4
 Identities = 12/32 (37%), Positives = 17/32 (52%)
 Frame = +3 / -1

                                             
Query: 357   CVRPSNWSTYQLQRSRCYR*RINQALHTYYIG 452
             C +PS+W+ Y+   SR  R   NQ +    IG
Sbjct: 74393 CGKPSSWALYRTSLSRY*RCMTNQRVRP*VIG 74298


>GI-14318439_09 gi-14318439_09.seq Continuation (9 of 11) of gi-14318439
             from base 800001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.4
 Identities = 9/19 (47%), Positives = 12/19 (62%)
 Frame = -1 / +3

                                
Query: 581   CRNRREGPKVQLKKKITNV 525
             C + REGP  Q+ KK+  V
Sbjct: 10467 CEDHREGPLYQIHKKVVQV 10523


>GI-14318434_01 gi-14318434_01.seq Continuation (1 of 11) of gi-14318434
             from base 1
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.4
 Identities = 10/24 (41%), Positives = 15/24 (61%)
 Frame = +2 / -1

                                     
Query: 281   SLNLWKRHK*AIMLPNSDLLFQPL 352
             S++ WKR+K A+    +D  F PL
Sbjct: 53561 SISFWKRNKNAMSADETDAKFHPL 53490


>GI-14627172_8 gi-14627172_8.seq Continuation (8 of 8) of gi-14627172
             from base 700001
          Length = 45444

 Score = 27.2 bits (53), Expect = 8.4
 Identities = 14/38 (36%), Positives = 15/38 (38%)
 Frame = -1 / +2

                                                   
Query: 161   RPCRKSMAPFLPRGCLSVCLPRDARGGGWLVGCPGWRC 48
             R CR   +    RGC S    R  R G    GC   RC
Sbjct: 14768 RSCRSCRSGRSSRGCRSSRCGRSCRSGRSSRGCRSSRC 14881


  Database: /home/pmiguel/yeast/yeast
    Posted date:  Oct 27, 2001  2:26 PM
  Number of letters in database: 13,206,306
  Number of sequences in database:  122
  
Lambda     K      H
   0.318    0.135    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 17211333
Number of Sequences: 122
Number of extensions: 228733
Number of successful extensions: 15668
Number of sequences better than 10.0: 28
length of query: 304
length of database: 4,402,102
effective HSP length: 44
effective length of query: 260
effective length of database: 4,396,734
effective search space: 1143150840
effective search space used: 1143150840
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 53 (27.2 bits)