TBLASTX 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCPvsSce/blast/0941_D04_G07ZS5.seq
         (888 letters)

Database: /home/pmiguel/yeast/yeast
           122 sequences; 13,206,306 total letters

Searching............................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

GI-14318434_05 gi-14318434_05.seq Continuation (5 of 11) of gi-1...    84  1e-26
GI-14318439_11 gi-14318439_11.seq Continuation (11 of 11) of gi-...    28  0.24
GI-6323501_09 gi-6323501_09.seq Continuation (9 of 10) of gi-632...    31  0.46
GI-6324971_03 gi-6324971_03.seq Continuation (3 of 10) of gi-632...    31  0.64
GI-6862570_1 gi-6862570_1.seq Continuation (1 of 6) of gi-686257...    30  0.87
GI-14270686_8 gi-14270686_8.seq Continuation (8 of 9) of gi-1427...    30  0.87
GI-14389432_04 gi-14389432_04.seq Continuation (4 of 11) of gi-1...    30  1.2
GI-6323501_06 gi-6323501_06.seq Continuation (6 of 10) of gi-632...    29  1.6
GI-6323989_5 gi-6323989_5.seq Continuation (5 of 8) of gi-632398...    27  1.7
GI-6323989_4 gi-6323989_4.seq Continuation (4 of 8) of gi-632398...    29  2.3
GI-14389432_10 gi-14389432_10.seq Continuation (10 of 11) of gi-...    29  2.3
GI-6862570_3 gi-6862570_3.seq Continuation (3 of 6) of gi-686257...    28  5.9
GI-7839148_02 gi-7839148_02.seq Continuation (2 of 16) of gi-783...    27  8.1
GI-7276232_1 gi-7276232_1.seq Continuation (1 of 6) of gi-727623...    27  8.1
GI-6324971_09 gi-6324971_09.seq Continuation (9 of 10) of gi-632...    27  8.1
GI-6324971_07 gi-6324971_07.seq Continuation (7 of 10) of gi-632...    27  8.1
GI-6324971_05 gi-6324971_05.seq Continuation (5 of 10) of gi-632...    27  8.1
GI-6323501_08 gi-6323501_08.seq Continuation (8 of 10) of gi-632...    27  8.1
GI-6322016_2 gi-6322016_2.seq Continuation (2 of 5) of gi-632201...    27  8.1
GI-14627172_3 gi-14627172_3.seq Continuation (3 of 8) of gi-1462...    27  8.1
GI-14389432_05 gi-14389432_05.seq Continuation (5 of 11) of gi-1...    27  8.1
GI-14318439_08 gi-14318439_08.seq Continuation (8 of 11) of gi-1...    27  8.1
GI-14318434_08 gi-14318434_08.seq Continuation (8 of 11) of gi-1...    27  8.1
GI-14318434_03 gi-14318434_03.seq Continuation (3 of 11) of gi-1...    27  8.1
GI-14277709_4 gi-14277709_4.seq Continuation (4 of 7) of gi-1427...    27  8.1
GI-14277709_3 gi-14277709_3.seq Continuation (3 of 7) of gi-1427...    27  8.1
GI-14270686_3 gi-14270686_3.seq Continuation (3 of 9) of gi-1427...    27  8.1

>GI-14318434_05 gi-14318434_05.seq Continuation (5 of 11) of gi-14318434
             from base 400001
          Length = 110000

 Score = 83.5 bits (176), Expect(2) = 1e-26
 Identities = 36/61 (59%), Positives = 46/61 (75%)
 Frame = +2 / +2

                                                                         
Query: 197   QLQGKLIILANNCPPLRKSEIEYYAMLAKISVHHFHGNNVDLGTACGKYYRVCCLSILDP 376
             Q + KLII+A N P LRKSE+EYYAML+K  V++F G N +LGTA GK +RV  +SIL+ 
Sbjct: 39422 QGKSKLIIIAANTPVLRKSELEYYAMLSKTKVYYFQGGNNELGTAVGKLFRVGVVSILEA 39601

              
Query: 377   G 379
             G
Sbjct: 39602 G 39604


 Score = 63.8 bits (133), Expect(3) = 2e-11
 Identities = 33/63 (52%), Positives = 41/63 (64%)
 Frame = -1 / -3

                                                                         
Query: 399   VLMMSESPGSRMLRQHTR*YLPQAVPRSTLFPWKWCTLIFANIA*YSISDFLRGGQLFAR 220
             V+ +SESP S++    T   LP AVP S L PWK  TL+  NIA*YS SDFL+ G L A 
Sbjct: 39624 VVKISESPASKIETTPTLNNLPTAVPNSLLPPWK**TLVLDNIA*YSNSDFLKTGVLAAM 39445

                
Query: 219   IIS 211
             +I+
Sbjct: 39444 MIN 39436


 Score = 53.8 bits (111), Expect(2) = 1e-26
 Identities = 22/31 (70%), Positives = 27/31 (86%)
 Frame = +3 / +2

                                            
Query: 105   KSGENINNKLQLVMKSGKYTLGYKTVLKTLR 197
             KS E+IN KL LV+KSGKYTLGYK+ +K+LR
Sbjct: 39329 KSQESINQKLALVIKSGKYTLGYKSTVKSLR 39421


 Score = 34.5 bits (69), Expect = 0.050
 Identities = 19/65 (29%), Positives = 32/65 (49%)
 Frame = -3 / -2

                                                                         
Query: 391   DVRVTRVKDAEAAHPVVLAAGCSKINIVSMEMVHANFRQHSVVLNL*LPQGRAVVCEDYQ 212
             D+RVT  ++ +      L    ++  + ++E+V  +  QHSV+    L Q  +V   D Q
Sbjct: 39616 DIRVTSFQNRDNTDSE*LTDSSTQFVVTTLEVVDLSLGQHSVIFQFGLSQNWSVSGNDDQ 39437

                  
Query: 211   LPLEL 197
             L L L
Sbjct: 39436 LRLTL 39422


 Score = 23.1 bits (44), Expect(3) = 2e-11
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -3 / -3

                                  
Query: 175   L*PSVYLPLFITSCSLLLMFS 113
             L*P VYLP  IT  +  L+ S
Sbjct: 39399 L*PKVYLPDLITKANFWLIDS 39337


 Score = 18.0 bits (33), Expect(3) = 2e-11
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2 / -2

                              
Query: 206   LGAAQRLEDGLVAERIL 156
             L  +QRL+ GLV   +L
Sbjct: 39430 LTLSQRLDSGLVT*GVL 39380


>GI-14318439_11 gi-14318439_11.seq Continuation (11 of 11) of
             gi-14318439 from base 1000001
          Length = 91284

 Score = 28.1 bits (55), Expect(2) = 0.24
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -2 / -1

                        
Query: 431   SSLLFTGWWWW 399
             +S+ F  WWWW
Sbjct: 74721 TSIFFVWWWWW 74689


 Score = 22.1 bits (42), Expect(2) = 0.24
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -2 / -3

                                                  
Query: 329   LFQDQHCFHGNGAR*FSPT*RSTQSLTSSGAGSCLRG 219
             L  D H  H   +  F P   S + +TSS   S +RG
Sbjct: 74680 LLDDHHGCHCRTSHAFFPKIFSHRMVTSSRKSS*IRG 74570


>GI-6323501_09 gi-6323501_09.seq Continuation (9 of 10) of gi-6323501
             from base 800001
          Length = 110000

 Score = 31.3 bits (62), Expect = 0.46
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -1 / -2

                               
Query: 447   NRWRALFSSLHWVVVVVL 394
             NRW A F++ HW V+V+L
Sbjct: 62857 NRWFATFTTGHWFVIVIL 62804


>GI-6324971_03 gi-6324971_03.seq Continuation (3 of 10) of gi-6324971
             from base 200001
          Length = 110000

 Score = 30.8 bits (61), Expect = 0.64
 Identities = 10/24 (41%), Positives = 14/24 (57%)
 Frame = -1 / -1

                                     
Query: 342   YLPQAVPRSTLFPWKWCTLIFANI 271
             Y+    PR  LFP+ WC L+  N+
Sbjct: 28856 YIYHRPPRPFLFPFPWCLLLINNV 28785


>GI-6862570_1 gi-6862570_1.seq Continuation (1 of 6) of gi-6862570 from
             base 1
          Length = 110000

 Score = 30.4 bits (60), Expect = 0.87
 Identities = 7/15 (46%), Positives = 12/15 (79%)
 Frame = +2 / +2

                            
Query: 554   YFIWLFRWTFMWFCF 598
             +F+W+F + F W+CF
Sbjct: 58883 FFLWIFFFFFTWYCF 58927


>GI-14270686_8 gi-14270686_8.seq Continuation (8 of 9) of gi-14270686
             from base 700001
          Length = 110000

 Score = 30.4 bits (60), Expect = 0.87
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = -2 / +1

                                             
Query: 491   VVSRAQQDPTTRLNKIGGELSSLLFTGWWWWC 396
             V++  +  P T+L+ + G +  ++   W WWC
Sbjct: 90016 VINTLKHLPNTKLDAVFGLIPLVILYVWKWWC 90111


>GI-14389432_04 gi-14389432_04.seq Continuation (4 of 11) of gi-14389432
             from base 300001
          Length = 110000

 Score = 29.9 bits (59), Expect = 1.2
 Identities = 10/32 (31%), Positives = 16/32 (49%)
 Frame = -2 / +1

                                             
Query: 491   VVSRAQQDPTTRLNKIGGELSSLLFTGWWWWC 396
             V+   +  P T+L+ + G +   L   W WWC
Sbjct: 24418 VIETLKHLPDTKLDAVFGLIPLFLLYVWKWWC 24513


>GI-6323501_06 gi-6323501_06.seq Continuation (6 of 10) of gi-6323501
             from base 500001
          Length = 110000

 Score = 29.5 bits (58), Expect = 1.6
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2 / -3

                                      
Query: 281   KISVHHFHGNNVDLGTACGKYYRVC 355
             KI V H HG N+   + C K  ++C
Sbjct: 74430 KIIVVHIHGQNMKRQSVCNKEVKIC 74356


>GI-6323989_5 gi-6323989_5.seq Continuation (5 of 8) of gi-6323989 from
             base 400001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.1
 Identities = 4/4 (100%), Positives = 4/4 (100%)
 Frame = -2 / -1

                 
Query: 410   WWWW 399
             WWWW
Sbjct: 40520 WWWW 40509


 Score = 24.4 bits (47), Expect(2) = 1.7
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = -1 / -1

                     
Query: 318   STLFPWKW 295
             ST++PWKW
Sbjct: 96929 STVYPWKW 96906


 Score = 22.6 bits (43), Expect(2) = 1.7
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -2 / -1

                                      
Query: 494   RVVSRAQQDPTTRLNKIGGELSSLL 420
             R + R ++DP +R     GEL++L+
Sbjct: 97100 RRLKRFREDPMSRAKV*NGELANLI 97026


>GI-6323989_4 gi-6323989_4.seq Continuation (4 of 8) of gi-6323989 from
             base 300001
          Length = 110000

 Score = 29.0 bits (57), Expect = 2.3
 Identities = 11/17 (64%), Positives = 13/17 (75%)
 Frame = -3 / -1

                              
Query: 130   LLLMFSPLFFAFLVGAI 80
             L L+FSPLFF F +G I
Sbjct: 92243 LFLLFSPLFFTFSLGII 92193


>GI-14389432_10 gi-14389432_10.seq Continuation (10 of 11) of
             gi-14389432 from base 900001
          Length = 110000

 Score = 29.0 bits (57), Expect = 2.3
 Identities = 8/12 (66%), Positives = 9/12 (74%)
 Frame = +2 / +2

                         
Query: 560   IWLFRWTFMWFC 595
             IWL  W F+WFC
Sbjct: 16181 IWLTIWEFVWFC 16216


>GI-6862570_3 gi-6862570_3.seq Continuation (3 of 6) of gi-6862570 from
             base 200001
          Length = 110000

 Score = 27.6 bits (54), Expect = 5.9
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +1 / +1

                                                
Query: 475   CALETTLVIFGLCTFLRR*VGAVIQIILHMVVPLD 579
             C  E T  I   C F  R + A   ++ + VVP D
Sbjct: 85540 CCEEITYTILSKCRFFLRSMAAPTSLVKYKVVPSD 85644


>GI-7839148_02 gi-7839148_02.seq Continuation (2 of 16) of gi-7839148
             from base 100001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.1
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +2 / +1

                                                
Query: 191   AAQLQGKLIILANNCPPLRKSEIEYYAMLAKISVH 295
             A  L  K++      P     ++EYY +L KIS+H
Sbjct: 91510 ATVLSRKILKKTFKNPKYESLKLEYYNLLVKISLH 91614


>GI-7276232_1 gi-7276232_1.seq Continuation (1 of 6) of gi-7276232 from
             base 1
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.1
 Identities = 7/13 (53%), Positives = 11/13 (83%)
 Frame = +2 / -2

                          
Query: 560   IWLFRWTFMWFCF 598
             I++F+W F +FCF
Sbjct: 67501 IFIFKWVFSFFCF 67463


>GI-6324971_09 gi-6324971_09.seq Continuation (9 of 10) of gi-6324971
             from base 800001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.1
 Identities = 10/19 (52%), Positives = 12/19 (62%)
 Frame = -3 / -3

                                
Query: 148   FITSCSLLLMFSPLFFAFL 92
             F+  C LLL+  PLF  FL
Sbjct: 73743 FLKDCPLLLLVIPLFLGFL 73687


>GI-6324971_07 gi-6324971_07.seq Continuation (7 of 10) of gi-6324971
             from base 600001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.1
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -1 / +1

                                       
Query: 594   QNHMNVQRNNHMKYYLYDSSNSASQK 517
             +NHMN+Q+    K  +YD  +  + K
Sbjct: 72613 KNHMNLQKRTRHKSSMYDDEDEGALK 72690


>GI-6324971_05 gi-6324971_05.seq Continuation (5 of 10) of gi-6324971
             from base 400001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.1
 Identities = 4/4 (100%), Positives = 4/4 (100%)
 Frame = -2 / +3

                 
Query: 410   WWWW 399
             WWWW
Sbjct: 99246 WWWW 99257


>GI-6323501_08 gi-6323501_08.seq Continuation (8 of 10) of gi-6323501
             from base 700001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.1
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +2 / +1

                       
Query: 563   WLFRWTFMWF 592
             W +RW +MWF
Sbjct: 47416 WWYRWAYMWF 47445


>GI-6322016_2 gi-6322016_2.seq Continuation (2 of 5) of gi-6322016 from
             base 100001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.1
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -2 / +2

                                             
Query: 266   STQSLTSSGAGSCLRGLSASLGAAQRLEDGLV 171
             S+ S +SSG+GS    L+   G +++ +DG +
Sbjct: 28724 SSSSSSSSGSGSIYGDLADFSGPSEKFQDGTI 28819


>GI-14627172_3 gi-14627172_3.seq Continuation (3 of 8) of gi-14627172
             from base 200001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.1
 Identities = 13/44 (29%), Positives = 19/44 (42%)
 Frame = -1 / +1

                                                         
Query: 384   ESPGSRMLRQHTR*YLPQAVPRSTLFPWKWCTLIFANIA*YSIS 253
             ES  S  L+Q    Y    +   T + W WC  +F     YS++
Sbjct: 94876 ESLVSVRLKQREVDYCTPCLLLCTSYKWSWCLRVFRRRCQYSLA 95007


>GI-14389432_05 gi-14389432_05.seq Continuation (5 of 11) of gi-14389432
             from base 400001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.1
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +3 / +3

                                                
Query: 441   TYFI*SSCRVLLCSRNHSCYLRFMYLFATLSWSCH 545
             TYF+  S  VLLCS    C L    +F  +   C+
Sbjct: 94560 TYFLDQSWPVLLCSIGIKCVLVCRPIFVIMHAECN 94664


>GI-14318439_08 gi-14318439_08.seq Continuation (8 of 11) of gi-14318439
             from base 700001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.1
 Identities = 4/4 (100%), Positives = 4/4 (100%)
 Frame = -2 / +3

                 
Query: 410   WWWW 399
             WWWW
Sbjct: 51669 WWWW 51680


>GI-14318434_08 gi-14318434_08.seq Continuation (8 of 11) of gi-14318434
             from base 700001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.1
 Identities = 11/38 (28%), Positives = 22/38 (56%)
 Frame = -2 / -2

                                                   
Query: 533   TQRRKKVHKPKITRVVSRAQQDPTTRLNKIGGELSSLL 420
             T+  KK+H+  +  + S   ++   ++N I  ++SSLL
Sbjct: 52042 TEENKKLHEKNVQVLESVENKEYLPQINDIDNQISSLL 51929


>GI-14318434_03 gi-14318434_03.seq Continuation (3 of 11) of gi-14318434
             from base 200001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.1
 Identities = 8/12 (66%), Positives = 9/12 (74%)
 Frame = -1 / -1

                         
Query: 324   PRSTLFPWKWCT 289
             P S LFPW WC+
Sbjct: 26963 PLSPLFPW*WCS 26928


>GI-14277709_4 gi-14277709_4.seq Continuation (4 of 7) of gi-14277709
            from base 300001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.1
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -1 / +1

                                       
Query: 567  NHMKYYLYDSSNSASQKGT*TEDNKSG 487
            NH   YLY+SS S    G  ++  K G
Sbjct: 8857 NHSVSYLYESSTSKRSNGLFSQTQKQG 8937


>GI-14277709_3 gi-14277709_3.seq Continuation (3 of 7) of gi-14277709 from
              base 200001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.1
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -1 / +2

                                         
Query: 567    NHMKYYLYDSSNSASQKGT*TEDNKSG 487
              NH   YLY+SS S    G  ++  K G
Sbjct: 108857 NHSVSYLYESSTSKRSNGLFSQTQKQG 108937


>GI-14270686_3 gi-14270686_3.seq Continuation (3 of 9) of gi-14270686
             from base 200001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.1
 Identities = 8/26 (30%), Positives = 16/26 (60%)
 Frame = +1 / +3

                                       
Query: 436   SPPILFSRVVGSCCALETTLVIFGLC 513
             +PP+L   ++  CC + + L +F +C
Sbjct: 12720 APPVLKVFIICGCCIIPSVLNVFIIC 12797


  Database: /home/pmiguel/yeast/yeast
    Posted date:  Oct 27, 2001  2:26 PM
  Number of letters in database: 13,206,306
  Number of sequences in database:  122
  
Lambda     K      H
   0.318    0.135    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 14687922
Number of Sequences: 122
Number of extensions: 176580
Number of successful extensions: 13324
Number of sequences better than 10.0: 27
length of query: 296
length of database: 4,402,102
effective HSP length: 44
effective length of query: 251
effective length of database: 4,396,734
effective search space: 1103580234
effective search space used: 1103580234
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 52 (26.7 bits)