TBLASTX 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCPvsSce/blast/0941_D05_G09ZS5.seq
         (934 letters)

Database: /home/pmiguel/yeast/yeast
           122 sequences; 13,206,306 total letters

Searching............................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

GI-7839148_08 gi-7839148_08.seq Continuation (8 of 16) of gi-783...    31  0.67
GI-6323501_03 gi-6323501_03.seq Continuation (3 of 10) of gi-632...    29  1.7
GI-14627172_2 gi-14627172_2.seq Continuation (2 of 8) of gi-1462...    29  1.7
GI-6323501_09 gi-6323501_09.seq Continuation (9 of 10) of gi-632...    29  2.4
GI-6323501_08 gi-6323501_08.seq Continuation (8 of 10) of gi-632...    29  2.4
GI-14627172_1 gi-14627172_1.seq Continuation (1 of 8) of gi-1462...    28  3.1
GI-6323989_7 gi-6323989_7.seq Continuation (7 of 8) of gi-632398...    27  4.1
GI-6862570_2 gi-6862570_2.seq Continuation (2 of 6) of gi-686257...    28  4.5
GI-6323989_2 gi-6323989_2.seq Continuation (2 of 8) of gi-632398...    28  4.5
GI-14277709_4 gi-14277709_4.seq Continuation (4 of 7) of gi-1427...    25  5.4
GI-14389432_08 gi-14389432_08.seq Continuation (8 of 11) of gi-1...    24  5.4
GI-6862570_3 gi-6862570_3.seq Continuation (3 of 6) of gi-686257...    28  6.2
GI-6324971_07 gi-6324971_07.seq Continuation (7 of 10) of gi-632...    28  6.2
GI-6324971_01 gi-6324971_01.seq Continuation (1 of 10) of gi-632...    28  6.2
GI-14318439_07 gi-14318439_07.seq Continuation (7 of 11) of gi-1...    28  6.2
GI-14277709_6 gi-14277709_6.seq Continuation (6 of 7) of gi-1427...    28  6.2
GI-6323501_07 gi-6323501_07.seq Continuation (7 of 10) of gi-632...    23  7.1
GI-6319247 gi|6319247|ref|NC_001133.1| Saccharomyces cerevisiae ...    27  8.6
GI-7276232_2 gi-7276232_2.seq Continuation (2 of 6) of gi-727623...    27  8.6
GI-14318434_09 gi-14318434_09.seq Continuation (9 of 11) of gi-1...    27  8.6
GI-14318434_08 gi-14318434_08.seq Continuation (8 of 11) of gi-1...    27  8.6
GI-14318434_04 gi-14318434_04.seq Continuation (4 of 11) of gi-1...    27  8.6
GI-14318434_03 gi-14318434_03.seq Continuation (3 of 11) of gi-1...    27  8.6
GI-14277709_2 gi-14277709_2.seq Continuation (2 of 7) of gi-1427...    27  8.6
GI-14277709_1 gi-14277709_1.seq Continuation (1 of 7) of gi-1427...    27  8.6
GI-7839148_14 gi-7839148_14.seq Continuation (14 of 16) of gi-78...    22  9.3

>GI-7839148_08 gi-7839148_08.seq Continuation (8 of 16) of gi-7839148
             from base 700001
          Length = 110000

 Score = 30.8 bits (61), Expect = 0.67
 Identities = 10/17 (58%), Positives = 13/17 (75%)
 Frame = -1 / +1

                              
Query: 478   CSCCCVTRIRLSAQSNF 428
             CSCCC+  + LS+ SNF
Sbjct: 50101 CSCCCLYCVCLSSNSNF 50151


>GI-6323501_03 gi-6323501_03.seq Continuation (3 of 10) of gi-6323501
             from base 200001
          Length = 110000

 Score = 29.5 bits (58), Expect = 1.7
 Identities = 14/25 (56%), Positives = 15/25 (60%)
 Frame = +1 / +1

                                      
Query: 199   CFTRSCRKPRLPILALRVETGASSS 273
             C TR C  P+ PI AL  E  ASSS
Sbjct: 54775 CGTRQCPIPKKPISALDKEVFASSS 54849


>GI-14627172_2 gi-14627172_2.seq Continuation (2 of 8) of gi-14627172
             from base 100001
          Length = 110000

 Score = 29.5 bits (58), Expect = 1.7
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -1 / +2

                            
Query: 508   GLAGQN*MFLCSCCC 464
             GL  QN* F C CCC
Sbjct: 49817 GLTKQN*EFCCCCCC 49861


>GI-6323501_09 gi-6323501_09.seq Continuation (9 of 10) of gi-6323501
            from base 800001
          Length = 110000

 Score = 29.0 bits (57), Expect = 2.4
 Identities = 12/31 (38%), Positives = 14/31 (44%)
 Frame = +1 / +1

                                           
Query: 775  KTAGGTPLNPLARRLSYSSSATFFQILHKCH 867
            K   G PLN  A    Y +S    Q + KCH
Sbjct: 2458 KVPAGKPLNSFAFHEQYQNSNKTIQTIKKCH 2550


 Score = 28.1 bits (55), Expect = 4.5
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +2 / -2

                                 
Query: 527   T*QVLSGDVKSHKPPYGVHG 586
             T Q+L+  +  HKPP+GV G
Sbjct: 88144 TTQLLAAFIHEHKPPFGVGG 88085


>GI-6323501_08 gi-6323501_08.seq Continuation (8 of 10) of gi-6323501 from
              base 700001
          Length = 110000

 Score = 29.0 bits (57), Expect = 2.4
 Identities = 12/31 (38%), Positives = 14/31 (44%)
 Frame = +1 / +2

                                             
Query: 775    KTAGGTPLNPLARRLSYSSSATFFQILHKCH 867
              K   G PLN  A    Y +S    Q + KCH
Sbjct: 102458 KVPAGKPLNSFAFHEQYQNSNKTIQTIKKCH 102550


>GI-14627172_1 gi-14627172_1.seq Continuation (1 of 8) of gi-14627172
             from base 1
          Length = 110000

 Score = 28.1 bits (55), Expect(2) = 3.1
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -2 / +3

                                 
Query: 231   QSRLPTTPGEAASPCLQPVA 172
             + RLP TP    SPCLQ V+
Sbjct: 94485 RKRLPWTPHPVYSPCLQTVS 94544


 Score = 18.0 bits (33), Expect(2) = 3.1
 Identities = 10/26 (38%), Positives = 12/26 (45%)
 Frame = -3 / +1

                                       
Query: 368   HCLLLLQRQAKELQSVIFHILYNCFI 291
             H  LLL R    L   I  +  +CFI
Sbjct: 94285 HSRLLLCRYRYRLTFCIACVRNSCFI 94362


>GI-6323989_7 gi-6323989_7.seq Continuation (7 of 8) of gi-6323989 from
             base 600001
          Length = 110000

 Score = 27.2 bits (53), Expect(2) = 4.1
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +1 / -1

                        
Query: 346   RWRRRRQWPSK 378
             RWRRR+QW +K
Sbjct: 74600 RWRRRKQWHTK 74568


 Score = 18.5 bits (34), Expect(2) = 4.1
 Identities = 12/51 (23%), Positives = 20/51 (38%)
 Frame = +3 / -2

                                                                
Query: 411   NRASSEKLDWAESLILVTQQHEQRNIQFWPANPSTFRDALDKYSVEMSNLT 563
             N  S   +D ++ +ILV        I     N    +   DK + ++  LT
Sbjct: 74482 NDDSPTAIDASKGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLT 74330


>GI-6862570_2 gi-6862570_2.seq Continuation (2 of 6) of gi-6862570 from
             base 100001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.5
 Identities = 9/22 (40%), Positives = 16/22 (71%)
 Frame = +3 / +2

                                   
Query: 426   EKLDWAESLILVTQQHEQRNIQ 491
             +++DW+E+LI +T Q  +  IQ
Sbjct: 20951 DEVDWSETLIQITVQVSKIGIQ 21016


 Score = 27.2 bits (53), Expect = 8.6
 Identities = 13/23 (56%), Positives = 15/23 (64%)
 Frame = -3 / -2

                                    
Query: 302   NCFINSVVC*LEEAPVSTRRAKI 234
             NCFINS+VC  E A +S  R  I
Sbjct: 79555 NCFINSLVCLDE*AKLSIIREAI 79487


>GI-6323989_2 gi-6323989_2.seq Continuation (2 of 8) of gi-6323989 from
             base 100001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.5
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -3 / -3

                                   
Query: 485   VPLLVLLRHED*ALCPVQLFRR 420
             VPL ++ R+    LCP+QL  R
Sbjct: 15672 VPLCIVSRYRHRGLCPIQLIER 15607


>GI-14277709_4 gi-14277709_4.seq Continuation (4 of 7) of gi-14277709
             from base 300001
          Length = 110000

 Score = 25.3 bits (49), Expect(2) = 5.4
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -1 / +2

                     
Query: 487   MFLCSCCC 464
             MFLC CCC
Sbjct: 82136 MFLCYCCC 82159


 Score = 19.8 bits (37), Expect(2) = 5.4
 Identities = 5/10 (50%), Positives = 6/10 (60%)
 Frame = -1 / +1

                       
Query: 361   FFFSSGKPKN 332
             +FF   K KN
Sbjct: 82249 YFFFKNKEKN 82278


>GI-14389432_08 gi-14389432_08.seq Continuation (8 of 11) of gi-14389432
             from base 700001
          Length = 110000

 Score = 24.4 bits (47), Expect(2) = 5.4
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +1 / -1

                                           
Query: 346   RWRRRRQWPSKSMASKGLDTTTTERRLKSW 435
             RW     W S  + +K +    T RRL S+
Sbjct: 63950 RWNPASVWASPPLRAKRVKFCLTNRRLSSF 63861


 Score = 20.8 bits (39), Expect(2) = 5.4
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = +1 / -2

                        
Query: 523   MHLTSTQWRCQ 555
             +H +S QW C+
Sbjct: 63868 VHSSSNQWLCR 63836


>GI-6862570_3 gi-6862570_3.seq Continuation (3 of 6) of gi-6862570 from
             base 200001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.2
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -3 / +2

                                   
Query: 854   RIWKKVAELE*ERRLARGFKGV 789
             RIWK+  E E  R+L + F+GV
Sbjct: 21488 RIWKQFKEEEERRKLVQVFRGV 21553


>GI-6324971_07 gi-6324971_07.seq Continuation (7 of 10) of gi-6324971
             from base 600001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.2
 Identities = 13/39 (33%), Positives = 20/39 (50%)
 Frame = -1 / +2

                                                    
Query: 616   RASCSTPRSLAMNTVRRLVRFDISTEYLSSASLNVDGLA 500
             R  CS  +SL    ++ LVR +      SS ++  DG+A
Sbjct: 91133 RDECSFSKSLIQRRIKILVRLEKVLNATSSRNVTKDGIA 91249


>GI-6324971_01 gi-6324971_01.seq Continuation (1 of 10) of gi-6324971
             from base 1
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.2
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = -1 / -2

                          
Query: 319   SFISCTTVSSTPW 281
             SFISCT   STPW
Sbjct: 76111 SFISCTQRCSTPW 76073


>GI-14318439_07 gi-14318439_07.seq Continuation (7 of 11) of gi-14318439
             from base 600001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.2
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +1 / +1

                                                      
Query: 730   RCCCTWMTPPGCRWRKTAGGTPLNPLARRLSYSSSATFFQI 852
             +CCC ++  P  RW   +   P   LA+ L   +S T + I
Sbjct: 71665 QCCCFFLI*P*IRWFAFSAPAPTISLAK*LYGENSTTCYII 71787


 Score = 27.2 bits (53), Expect = 8.6
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = -1 / -3

                              
Query: 322   LSFISCTTVSSTPWFVN 272
             L + +C + S  PWF+ 
Sbjct: 96729 LKYSACKSSSVNPWFIT 96679


>GI-14277709_6 gi-14277709_6.seq Continuation (6 of 7) of gi-14277709
             from base 500001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.2
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3 / -3

                                    
Query: 321   NTLQFFGLPLEKKKAVAIQVNGF 389
             NT+ FFG  L   K  A+QVN +
Sbjct: 87969 NTISFFGSALTTLKLKALQVNNY 87901


>GI-6323501_07 gi-6323501_07.seq Continuation (7 of 10) of gi-6323501
             from base 600001
          Length = 110000

 Score = 23.1 bits (44), Expect(2) = 7.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1 / -1

                           
Query: 358   FFSSGKPKNCRVLS 317
             F+ + KPKNC V S
Sbjct: 26858 FY*NRKPKNCNVFS 26817


 Score = 21.7 bits (41), Expect(2) = 7.1
 Identities = 5/7 (71%), Positives = 6/7 (85%)
 Frame = -1 / -2

                    
Query: 484   FLCSCCC 464
             +LC CCC
Sbjct: 26980 YLCYCCC 26960


>GI-6319247 gi|6319247|ref|NC_001133.1| Saccharomyces cerevisiae
             chromosome I, complete chro
          Length = 230203

 Score = 27.2 bits (53), Expect = 8.6
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +1 / +2

                                               
Query: 346   RWRRRRQWPSKSMASKGLDTTTTERRLKSWTGQR 447
             R +RR+ WP+K    K L     +RR +S   +R
Sbjct: 77021 RKKRRKDWPTKKK*RKKLKQLKRKRRRQSVKNER 77122


>GI-7276232_2 gi-7276232_2.seq Continuation (2 of 6) of gi-7276232 from
             base 100001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.6
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = -2 / +1

                            
Query: 378   LGWPLPSSSPAASQR 334
             LGW LP++S AASQ+
Sbjct: 64069 LGWVLPNTSAAASQQ 64113


>GI-14318434_09 gi-14318434_09.seq Continuation (9 of 11) of gi-14318434
             from base 800001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.6
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1 / +2

                      
Query: 478   CSCCCVTRI 452
             CSCCC TR+
Sbjct: 94067 CSCCCKTRV 94093


 Score = 27.2 bits (53), Expect = 8.6
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3 / +3

                                   
Query: 846  PDPSQMSPSKTPQPRVPPEPQKR 914
            P     +P + P PR+PP P  R
Sbjct: 6501 PPRPPRAPPRPPNPRLPPRPPPR 6569


>GI-14318434_08 gi-14318434_08.seq Continuation (8 of 11) of gi-14318434
              from base 700001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.6
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3 / +1

                                     
Query: 846    PDPSQMSPSKTPQPRVPPEPQKR 914
              P     +P + P PR+PP P  R
Sbjct: 106501 PPRPPRAPPRPPNPRLPPRPPPR 106569


>GI-14318434_04 gi-14318434_04.seq Continuation (4 of 11) of
            gi-14318434 from base 300001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1 / -1

                             
Query: 511  DGLAGQN*MFLCSCCCV 461
            DG      +F CSCCC+
Sbjct: 8054 DGFGFSGALFCCSCCCL 8004


>GI-14318434_03 gi-14318434_03.seq Continuation (3 of 11) of gi-14318434
              from base 200001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1 / -3

                               
Query: 511    DGLAGQN*MFLCSCCCV 461
              DG      +F CSCCC+
Sbjct: 108054 DGFGFSGALFCCSCCCL 108004


>GI-14277709_2 gi-14277709_2.seq Continuation (2 of 7) of gi-14277709
            from base 100001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.6
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3 / -1

                                 
Query: 846  PDPSQMSPSKTPQPRVPPEPQ 908
            P PS +   KTP+P  PP P+
Sbjct: 2243 PVPSLLRWVKTPKPEAPPGPK 2181


>GI-14277709_1 gi-14277709_1.seq Continuation (1 of 7) of gi-14277709 from
              base 1
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.6
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3 / -3

                                   
Query: 846    PDPSQMSPSKTPQPRVPPEPQ 908
              P PS +   KTP+P  PP P+
Sbjct: 102243 PVPSLLRWVKTPKPEAPPGPK 102181


>GI-7839148_14 gi-7839148_14.seq Continuation (14 of 16) of gi-7839148
             from base 1300001
          Length = 110000

 Score = 22.1 bits (42), Expect(2) = 9.3
 Identities = 7/25 (28%), Positives = 10/25 (40%)
 Frame = -1 / +3

                                      
Query: 478   CSCCCVTRIRLSAQSNFSDDALL*W 404
             C CCC+    +  +  FS      W
Sbjct: 46539 CCCCCICCCCMVLKFTFSGSVCAMW 46613


 Score = 22.1 bits (42), Expect(2) = 9.3
 Identities = 5/8 (62%), Positives = 6/8 (74%)
 Frame = -1 / +3

                     
Query: 487   MFLCSCCC 464
             +F C CCC
Sbjct: 46515 LFCCCCCC 46538


  Database: /home/pmiguel/yeast/yeast
    Posted date:  Oct 27, 2001  2:26 PM
  Number of letters in database: 13,206,306
  Number of sequences in database:  122
  
Lambda     K      H
   0.318    0.135    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 24537061
Number of Sequences: 122
Number of extensions: 321308
Number of successful extensions: 22391
Number of sequences better than 10.0: 26
length of query: 311
length of database: 4,402,102
effective HSP length: 44
effective length of query: 266
effective length of database: 4,396,734
effective search space: 1169531244
effective search space used: 1169531244
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 53 (27.2 bits)