TBLASTX 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCPvsSce/blast/0941_D07_G13ZS5.seq
         (920 letters)

Database: /home/pmiguel/yeast/yeast
           122 sequences; 13,206,306 total letters

Searching............................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

GI-7839148_01 gi-7839148_01.seq Continuation (1 of 16) of gi-783...    33  0.14
GI-14627172_4 gi-14627172_4.seq Continuation (4 of 8) of gi-1462...    32  0.26
GI-14627172_6 gi-14627172_6.seq Continuation (6 of 8) of gi-1462...    30  1.3
GI-14318439_07 gi-14318439_07.seq Continuation (7 of 11) of gi-1...    30  1.3
GI-14318439_03 gi-14318439_03.seq Continuation (3 of 11) of gi-1...    30  1.3
GI-7839148_03 gi-7839148_03.seq Continuation (3 of 16) of gi-783...    29  1.7
GI-14270686_2 gi-14270686_2.seq Continuation (2 of 9) of gi-1427...    29  2.4
GI-14627172_7 gi-14627172_7.seq Continuation (7 of 8) of gi-1462...    29  3.2
GI-6862570_6 gi-6862570_6.seq Continuation (6 of 6) of gi-686257...    24  4.4
GI-14318434_04 gi-14318434_04.seq Continuation (4 of 11) of gi-1...    28  4.5
GI-6862570_1 gi-6862570_1.seq Continuation (1 of 6) of gi-686257...    28  6.1
GI-6323989_5 gi-6323989_5.seq Continuation (5 of 8) of gi-632398...    28  6.1
GI-14277709_1 gi-14277709_1.seq Continuation (1 of 7) of gi-1427...    28  6.1
GI-14318434_02 gi-14318434_02.seq Continuation (2 of 11) of gi-1...    25  7.0
GI-10383748 gi|10383748|ref|NC_001135.2| Saccharomyces cerevisia...    25  7.6
GI-14389432_11 gi-14389432_11.seq Continuation (11 of 11) of gi-...    27  8.4
GI-6319247 gi|6319247|ref|NC_001133.1| Saccharomyces cerevisiae ...    27  8.4
GI-6324971_02 gi-6324971_02.seq Continuation (2 of 10) of gi-632...    27  8.4
GI-6324971_01 gi-6324971_01.seq Continuation (1 of 10) of gi-632...    27  8.4
GI-14277709_3 gi-14277709_3.seq Continuation (3 of 7) of gi-1427...    27  8.4

>GI-7839148_01 gi-7839148_01.seq Continuation (1 of 16) of gi-7839148
             from base 1
          Length = 110000

 Score = 33.1 bits (66), Expect = 0.14
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +3 / -2

                                      
Query: 792   SLFFFMFHSFPCMLFTGFSIFPFLP 866
             SLFFF F  FP +L+     FP +P
Sbjct: 92713 SLFFFFFFFFPYLLYLSVIYFPLIP 92639


>GI-14627172_4 gi-14627172_4.seq Continuation (4 of 8) of gi-14627172
             from base 300001
          Length = 110000

 Score = 32.2 bits (64), Expect = 0.26
 Identities = 14/39 (35%), Positives = 19/39 (47%)
 Frame = +3 / +3

                                                    
Query: 750   WVAPIFFTSPFVPGSLFFFMFHSFPCMLFTGFSIFPFLP 866
             W+  +FF+S   P SLFF  F SF  ++       P  P
Sbjct: 91950 WIYLLFFSSSLSPFSLFFLSFISFFFLIVPSIGYLPKNP 92066


>GI-14627172_6 gi-14627172_6.seq Continuation (6 of 8) of gi-14627172
             from base 500001
          Length = 110000

 Score = 29.9 bits (59), Expect = 1.3
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = +3 / -1

                                                  
Query: 780   FVPGSLFFFMFHSFPCMLFTGFSIFPFLPRGSWFVFF 890
             FV  S FFF F+ F C+    F +  F      F FF
Sbjct: 25508 FVSSSFFFFFFYFFSCVHLFFFQLTSFCILFCVFFFF 25398


 Score = 28.6 bits (56), Expect = 3.2
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1 / -1

                             
Query: 820    FLVCCLRALVFFLFY 864
              FL CCL  ++ FLFY
Sbjct: 105722 FLACCLPCILLFLFY 105678


>GI-14318439_07 gi-14318439_07.seq Continuation (7 of 11) of gi-14318439
             from base 600001
          Length = 110000

 Score = 29.9 bits (59), Expect = 1.3
 Identities = 13/29 (44%), Positives = 17/29 (57%)
 Frame = -2 / -1

                                          
Query: 895   SKKKTNQEPRGRKGKILKPVNNIQGNEWN 809
             S K+ +   +   GKILK  NNI G E+N
Sbjct: 34316 SVKEVDAMSKVSSGKILKKFNNIDGEEFN 34230


>GI-14318439_03 gi-14318439_03.seq Continuation (3 of 11) of gi-14318439
             from base 200001
          Length = 110000

 Score = 29.9 bits (59), Expect = 1.3
 Identities = 11/28 (39%), Positives = 16/28 (56%)
 Frame = +3 / -2

                                         
Query: 753   VAPIFFTSPFVPGSLFFFMFHSFPCMLF 836
             + P+FF SPF P  + F +F   P  +F
Sbjct: 32023 LCPMFF*SPFSPKIILFLLFFFSPVSIF 31940


>GI-7839148_03 gi-7839148_03.seq Continuation (3 of 16) of gi-7839148
             from base 200001
          Length = 110000

 Score = 29.5 bits (58), Expect = 1.7
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +1 / -2

                                                
Query: 550   SPEEFLSHVGFLLGQHSYCGKTDSVGGFVFYPVAK 654
             SP E LSH+  LL  HS+    D+V   +  P+ +
Sbjct: 31870 SPNEKLSHIRLLLDCHSFFSSLDAVYCSLLIPMCQ 31766


>GI-14270686_2 gi-14270686_2.seq Continuation (2 of 9) of gi-14270686
             from base 100001
          Length = 110000

 Score = 29.0 bits (57), Expect = 2.4
 Identities = 11/19 (57%), Positives = 14/19 (72%)
 Frame = -2 / +1

                                
Query: 820   NEWNIKKKRLPGTNGEVKK 764
             N+ N K +  PGTNG+VKK
Sbjct: 41719 NQVNFKNQYEPGTNGKVKK 41775


>GI-14627172_7 gi-14627172_7.seq Continuation (7 of 8) of gi-14627172
            from base 600001
          Length = 110000

 Score = 28.6 bits (56), Expect = 3.2
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1 / -2

                           
Query: 820  FLVCCLRALVFFLFY 864
            FL CCL  ++ FLFY
Sbjct: 5722 FLACCLPCILLFLFY 5678


>GI-6862570_6 gi-6862570_6.seq Continuation (6 of 6) of gi-6862570 from
             base 500001
          Length = 62639

 Score = 24.0 bits (46), Expect(2) = 4.4
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -1 / +3

                         
Query: 56    WVWCVXLRTAVL 21
             WVWCV +   VL
Sbjct: 56967 WVWCVYIYVTVL 57002


 Score = 21.7 bits (41), Expect(2) = 4.4
 Identities = 5/9 (55%), Positives = 5/9 (55%)
 Frame = -1 / +3

                      
Query: 71    CA*VAWVWC 45
             C    WVWC
Sbjct: 56862 CGCGVWVWC 56888


>GI-14318434_04 gi-14318434_04.seq Continuation (4 of 11) of gi-14318434
             from base 300001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.5
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -1 / -3

                                        
Query: 431   GFHLAGIISLNPSPLYATKSVFFFALP 351
             GFH+  ++ L PS     KS+   +LP
Sbjct: 87762 GFHVDKLLDLGPSSQPRNKSITISSLP 87682


>GI-6862570_1 gi-6862570_1.seq Continuation (1 of 6) of gi-6862570 from
             base 1
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.1
 Identities = 10/21 (47%), Positives = 15/21 (70%)
 Frame = -1 / +2

                                  
Query: 431   GFHLAGIISLNPSPLYATKSV 369
             GF LAG  ++  SPL+ +KS+
Sbjct: 24929 GFALAGFTNMGTSPLFCSKSL 24991


>GI-6323989_5 gi-6323989_5.seq Continuation (5 of 8) of gi-6323989 from
             base 400001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.1
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +1 / +1

                                       
Query: 520   TTKKTITDYGSPEEFLSHVGFLLGQH 597
             T+K  ++ +     F+ H GFL  QH
Sbjct: 80194 TSKNELSKFSKNHNFIFHKGFLKRQH 80271


>GI-14277709_1 gi-14277709_1.seq Continuation (1 of 7) of gi-14277709
             from base 1
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.1
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -1 / -2

                                   
Query: 824   RKRVEHKKEKTPRNKRRSKENR 759
             RKR   K+ K  R KRR K+ R
Sbjct: 64258 RKRKRRKRRKKKRRKRRKKKKR 64193


>GI-14318434_02 gi-14318434_02.seq Continuation (2 of 11) of gi-14318434
             from base 100001
          Length = 110000

 Score = 25.3 bits (49), Expect(2) = 7.0
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +3 / -2

                              
Query: 798   FFFMFHSFPCMLFTGFS 848
             FFF F  FP   F  FS
Sbjct: 40336 FFFFFFYFPFFFFNVFS 40286


 Score = 19.4 bits (36), Expect(2) = 7.0
 Identities = 9/22 (40%), Positives = 12/22 (53%)
 Frame = +2 / -2

                                   
Query: 710   FIVLLIALRSFTRVGSSYFLYF 775
             FIV   A+R  +R    +F YF
Sbjct: 40378 FIV*EFAIRLISRFFFFFFFYF 40313


>GI-10383748 gi|10383748|ref|NC_001135.2| Saccharomyces cerevisiae
             chromosome III, complete c
          Length = 316613

 Score = 24.9 bits (48), Expect(2) = 7.6
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +3 / -1

                                   
Query: 804   FMFHSFPCMLFTGFSIFPFLPR 869
             F  HSF   L T   I PF+PR
Sbjct: 78692 FT*HSFK*NLLTKVCILPFIPR 78627


 Score = 19.4 bits (36), Expect(2) = 7.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3 / -1

                           
Query: 876   WFVFFLLHLIKNKK 917
             WF+FFL    + KK
Sbjct: 78524 WFLFFLDRHNRRKK 78483


>GI-14389432_11 gi-14389432_11.seq Continuation (11 of 11) of
             gi-14389432 from base 1000001
          Length = 78173

 Score = 27.2 bits (53), Expect = 8.4
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1 / +1

                              
Query: 400   FKLMIPAKWNPXKEREF 450
             FK+M+  +WN  +  EF
Sbjct: 59035 FKVMVDRRWNQLRSDEF 59085


>GI-6319247 gi|6319247|ref|NC_001133.1| Saccharomyces cerevisiae
              chromosome I, complete chro
          Length = 230203

 Score = 27.2 bits (53), Expect = 8.4
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3 / -2

                                   
Query: 846    SIFPFLPRGSWFVFFLLHLIK 908
              SIF FL +  W VF + H+IK
Sbjct: 201747 SIFRFLYQNFWSVFCVSHIIK 201685


>GI-6324971_02 gi-6324971_02.seq Continuation (2 of 10) of gi-6324971
            from base 100001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.4
 Identities = 11/24 (45%), Positives = 15/24 (61%)
 Frame = -1 / +2

                                    
Query: 827  TRKRVEHKKEKTPRNKRRSKENRS 756
            TRKR  H++E+  R+ RR    RS
Sbjct: 7946 TRKRRRHRQER*RRSTRRRTGCRS 8017


>GI-6324971_01 gi-6324971_01.seq Continuation (1 of 10) of gi-6324971 from
              base 1
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.4
 Identities = 11/24 (45%), Positives = 15/24 (61%)
 Frame = -1 / +3

                                      
Query: 827    TRKRVEHKKEKTPRNKRRSKENRS 756
              TRKR  H++E+  R+ RR    RS
Sbjct: 107946 TRKRRRHRQER*RRSTRRRTGCRS 108017


>GI-14277709_3 gi-14277709_3.seq Continuation (3 of 7) of gi-14277709
             from base 200001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.4
 Identities = 12/43 (27%), Positives = 18/43 (40%)
 Frame = +3 / -2

                                                        
Query: 768   FTSPFVPGSLFFFMFHSFPCMLFTGFSIFPFLPRGSWFVFFLL 896
             FTSPF+   + F      P  +    +   F+ +   F FF L
Sbjct: 72964 FTSPFLTRYIIFLEIEKKPNAV*RSLAFITFIEKSDRFYFFFL 72836


  Database: /home/pmiguel/yeast/yeast
    Posted date:  Oct 27, 2001  2:26 PM
  Number of letters in database: 13,206,306
  Number of sequences in database:  122
  
Lambda     K      H
   0.318    0.135    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 19822329
Number of Sequences: 122
Number of extensions: 226321
Number of successful extensions: 16449
Number of sequences better than 10.0: 20
length of query: 306
length of database: 4,402,102
effective HSP length: 44
effective length of query: 262
effective length of database: 4,396,734
effective search space: 1151944308
effective search space used: 1151944308
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 53 (27.2 bits)