TBLASTX 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCPvsSce/blast/0941_D09_G17ZS5.seq
         (962 letters)

Database: /home/pmiguel/yeast/yeast
           122 sequences; 13,206,306 total letters

Searching............................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

GI-6323989_3 gi-6323989_3.seq Continuation (3 of 8) of gi-632398...    32  0.37
GI-14270686_7 gi-14270686_7.seq Continuation (7 of 9) of gi-1427...    31  0.70
GI-6323501_05 gi-6323501_05.seq Continuation (5 of 10) of gi-632...    30  0.96
GI-7839148_10 gi-7839148_10.seq Continuation (10 of 16) of gi-78...    29  1.8
GI-14318439_01 gi-14318439_01.seq Continuation (1 of 11) of gi-1...    29  1.8
GI-6323501_03 gi-6323501_03.seq Continuation (3 of 10) of gi-632...    29  3.4
GI-14318434_07 gi-14318434_07.seq Continuation (7 of 11) of gi-1...    29  3.4
GI-7839148_13 gi-7839148_13.seq Continuation (13 of 16) of gi-78...    28  4.7
GI-7839148_12 gi-7839148_12.seq Continuation (12 of 16) of gi-78...    28  4.7
GI-6862570_4 gi-6862570_4.seq Continuation (4 of 6) of gi-686257...    28  4.7
GI-6323501_09 gi-6323501_09.seq Continuation (9 of 10) of gi-632...    28  4.7
GI-14318439_03 gi-14318439_03.seq Continuation (3 of 11) of gi-1...    28  4.7
GI-14318450 gi|14318450|ref|NC_001138.2| Saccharomyces cerevisia...    28  6.5
GI-7839148_08 gi-7839148_08.seq Continuation (8 of 16) of gi-783...    28  6.5
GI-6324971_07 gi-6324971_07.seq Continuation (7 of 10) of gi-632...    28  6.5
GI-6324971_06 gi-6324971_06.seq Continuation (6 of 10) of gi-632...    28  6.5
GI-6323501_07 gi-6323501_07.seq Continuation (7 of 10) of gi-632...    28  6.5
GI-14318439_09 gi-14318439_09.seq Continuation (9 of 11) of gi-1...    28  6.5
GI-14277709_3 gi-14277709_3.seq Continuation (3 of 7) of gi-1427...    28  6.5
GI-10383748 gi|10383748|ref|NC_001135.2| Saccharomyces cerevisia...    27  8.9
GI-6862570_1 gi-6862570_1.seq Continuation (1 of 6) of gi-686257...    27  8.9
GI-6324971_09 gi-6324971_09.seq Continuation (9 of 10) of gi-632...    27  8.9
GI-6323989_2 gi-6323989_2.seq Continuation (2 of 8) of gi-632398...    27  8.9
GI-6323501_04 gi-6323501_04.seq Continuation (4 of 10) of gi-632...    27  8.9
GI-6322016_3 gi-6322016_3.seq Continuation (3 of 5) of gi-632201...    27  8.9
GI-14627172_3 gi-14627172_3.seq Continuation (3 of 8) of gi-1462...    27  8.9
GI-14277709_2 gi-14277709_2.seq Continuation (2 of 7) of gi-1427...    27  8.9
GI-14270686_6 gi-14270686_6.seq Continuation (6 of 9) of gi-1427...    27  8.9
GI-6324971_10 gi-6324971_10.seq Continuation (10 of 10) of gi-63...    27  8.9

>GI-6323989_3 gi-6323989_3.seq Continuation (3 of 8) of gi-6323989 from
             base 200001
          Length = 110000

 Score = 31.8 bits (63), Expect = 0.37
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2 / +3

                                          
Query: 830   YFSLLNIFPHPYLGNWPIL*ALNLCSKYP 916
             YF    +F HP+L N+P+L  L+    YP
Sbjct: 59016 YFRFSLLF*HPFLQNYPLLLTLHKICSYP 59102


>GI-14270686_7 gi-14270686_7.seq Continuation (7 of 9) of gi-14270686
             from base 600001
          Length = 110000

 Score = 30.8 bits (61), Expect = 0.70
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2 / +3

                           
Query: 689   LFTFHLPSFLYLLI 730
             LF FHLP  LY +I
Sbjct: 45555 LFEFHLPDILYYII 45596


 Score = 28.6 bits (56), Expect = 3.4
 Identities = 10/24 (41%), Positives = 12/24 (49%)
 Frame = -3 / -3

                                     
Query: 573   CSICINGNRWRSNTWRKQQRTHAE 502
             CSIC  G  WR    R   +T A+
Sbjct: 73854 CSICSQGRNWRQRVERDNGKTSAK 73783


>GI-6323501_05 gi-6323501_05.seq Continuation (5 of 10) of gi-6323501
             from base 400001
          Length = 110000

 Score = 30.4 bits (60), Expect = 0.96
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +1 / -1

                                        
Query: 820   VLTLFLLTQYFPSPLFGELANIVGLKS 900
             + T FLLT     PL+G+L++I G KS
Sbjct: 44876 IATSFLLTNTAFQPLYGKLSDITGRKS 44796


>GI-7839148_10 gi-7839148_10.seq Continuation (10 of 16) of gi-7839148
             from base 900001
          Length = 110000

 Score = 29.5 bits (58), Expect = 1.8
 Identities = 11/29 (37%), Positives = 18/29 (61%)
 Frame = +3 / -1

                                          
Query: 462   TXLASPLGVYCCCSLRVFVVVFSMCSTSI 548
             T LA   GV+CCC   ++ ++F + S S+
Sbjct: 30629 TALAILFGVWCCCIAGLWYLLFPI*SWSV 30543


 Score = 27.2 bits (53), Expect = 8.9
 Identities = 9/35 (25%), Positives = 17/35 (47%)
 Frame = -1 / -1

                                                
Query: 263   PHPAAARPRGCRRLPHRVGHARRDGGRHVAAGHRP 159
             P P  A+P   ++LP+R+     +G   ++    P
Sbjct: 75677 PSPQIAQPSTSQKLPYRINPTTTNGDTDISVNSNP 75573


 Score = 27.2 bits (53), Expect = 8.9
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3 / -1

                            
Query: 837   PYSIFSLTLIWGIGQ 881
             P+S+F LT +W  GQ
Sbjct: 68804 PFSVFDLTKVWPQGQ 68760


>GI-14318439_01 gi-14318439_01.seq Continuation (1 of 11) of gi-14318439
             from base 1
          Length = 110000

 Score = 29.5 bits (58), Expect = 1.8
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2 / -3

                                  
Query: 479   TRCLLLLLSACVRCCFLHVFD 541
             TRC  L+L AC  CC  H+ +
Sbjct: 92319 TRCRRLVLQACCLCCQTHLHE 92257


>GI-6323501_03 gi-6323501_03.seq Continuation (3 of 10) of gi-6323501
             from base 200001
          Length = 110000

 Score = 28.6 bits (56), Expect = 3.4
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2 / -3

                                      
Query: 710   SFLYLLIWETPGVYPNFISFVKPSP 784
             SF Y+ +  +PG  P F++  KP+P
Sbjct: 29253 SFSYVALKHSPGSLPAFLTGTKPTP 29179


>GI-14318434_07 gi-14318434_07.seq Continuation (7 of 11) of gi-14318434
             from base 600001
          Length = 110000

 Score = 28.6 bits (56), Expect = 3.4
 Identities = 10/28 (35%), Positives = 14/28 (49%)
 Frame = +3 / -3

                                         
Query: 243   ACCSGVRTLNAKASTPADRNAACNCLKN 326
             ACC  V  +    S+P +    C+CL N
Sbjct: 67593 ACCKEVLDIPKPTSSP*ESRTVCSCLPN 67510


>GI-7839148_13 gi-7839148_13.seq Continuation (13 of 16) of gi-7839148
             from base 1200001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.7
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = -3 / -2

                             
Query: 285   WTPWRSGSSPRCSTPP 238
             W PWR  S PR  T P
Sbjct: 72415 WVPWRPKSMPRGKTSP 72368


>GI-7839148_12 gi-7839148_12.seq Continuation (12 of 16) of gi-7839148
             from base 1100001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.7
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -1 / +2

                                         
Query: 182   HVAAGHRPGRHLRHRQCREHGEHGDQCH 99
             H AA  RPG  L+H        H + CH
Sbjct: 26366 HAAAMGRPGSCLKHFLATVFHRHSENCH 26449


>GI-6862570_4 gi-6862570_4.seq Continuation (4 of 6) of gi-6862570 from
             base 300001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.7
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1 / +3

                             
Query: 692   IDFTKGGNWEPGPPLS 645
             I F  GG WEPG P++
Sbjct: 36567 IAFAVGGKWEPGNPIA 36614


>GI-6323501_09 gi-6323501_09.seq Continuation (9 of 10) of gi-6323501
             from base 800001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.7
 Identities = 11/23 (47%), Positives = 16/23 (68%)
 Frame = +2 / +3

                                    
Query: 815   KGS*PYFSLLNIFPHPYLGNWPI 883
             K S*P++SLL+I   P+L  W +
Sbjct: 56091 KVS*PFYSLLSIHAIPHLRKWDL 56159


>GI-14318439_03 gi-14318439_03.seq Continuation (3 of 11) of gi-14318439
             from base 200001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.7
 Identities = 7/20 (35%), Positives = 9/20 (45%)
 Frame = +3 / -2

                                 
Query: 492   CCCSLRVFVVVFSMCSTSIC 551
             CCC       +F+ C   IC
Sbjct: 36985 CCCCCCCCCCIFNCCKCCIC 36926


>GI-14318450 gi|14318450|ref|NC_001138.2| Saccharomyces cerevisiae
              chromosome VI, complete ch
          Length = 270148

 Score = 27.6 bits (54), Expect = 6.5
 Identities = 7/19 (36%), Positives = 14/19 (72%)
 Frame = +1 / -1

                                 
Query: 472    LAHSVSTVAALCVCSLLFS 528
              ++H+  +   +C+CSL+FS
Sbjct: 160744 MSHTCLSFRIICLCSLVFS 160688


>GI-7839148_08 gi-7839148_08.seq Continuation (8 of 16) of gi-7839148
             from base 700001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.5
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +3 / +2

                                  
Query: 516   VVVFSMCSTSICCR*YRSSRL 578
             +VV S+CS   CCR  RSS L
Sbjct: 42401 LVVNSLCSGCCCCRGIRSSPL 42463


>GI-6324971_07 gi-6324971_07.seq Continuation (7 of 10) of gi-6324971
             from base 600001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2 / -3

                             
Query: 830   YFSLLNIFPHPYLGNW 877
             YF L+  +PHPY   W
Sbjct: 70302 YFDLIQYYPHPYSKFW 70255


>GI-6324971_06 gi-6324971_06.seq Continuation (6 of 10) of gi-6324971
             from base 500001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.5
 Identities = 9/22 (40%), Positives = 11/22 (49%)
 Frame = +3 / -3

                                   
Query: 489   YCCCSLRVFVVVFSMCSTSICC 554
             Y C + +VFV  F  C    CC
Sbjct: 24291 YHCINSKVFVTTFCPCGCCYCC 24226


>GI-6323501_07 gi-6323501_07.seq Continuation (7 of 10) of gi-6323501
             from base 600001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.5
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +2 / -3

                                 
Query: 671   FPP**SLFTFHLPSFLYLLI 730
             FPP   + TFHLPS + +LI
Sbjct: 99795 FPPYLGIGTFHLPSIITVLI 99736


>GI-14318439_09 gi-14318439_09.seq Continuation (9 of 11) of gi-14318439
             from base 800001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.5
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +1 / +2

                                  
Query: 745   RLPKLYFLCKAISLFLHLGRF 807
             R+ KLY+ C + SLFL L  F
Sbjct: 92078 RITKLYWHCPSTSLFLFLSTF 92140


>GI-14277709_3 gi-14277709_3.seq Continuation (3 of 7) of gi-14277709
             from base 200001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.5
 Identities = 10/38 (26%), Positives = 16/38 (41%)
 Frame = +3 / -2

                                                   
Query: 438   VIYQXXXXTXLASPLGVYCCCSLRVFVVVFSMCSTSIC 551
             V++       + S   + CC S+  F     +C TS C
Sbjct: 75568 VVFSLNIAFAILSFSSISCCLSVCFFCTCS*ICFTSSC 75455


>GI-10383748 gi|10383748|ref|NC_001135.2| Saccharomyces cerevisiae
              chromosome III, complete c
          Length = 316613

 Score = 27.2 bits (53), Expect = 8.9
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -1 / +3

                                    
Query: 125    HGEHGDQCHASHRGSSASVCLL 60
              HGE  ++CH  H GS+  + ++
Sbjct: 175164 HGEEEEECH*LHPGSNCLILMM 175229


>GI-6862570_1 gi-6862570_1.seq Continuation (1 of 6) of gi-6862570 from
             base 1
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.9
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -1 / -1

                                            
Query: 806   KRPRWRKREMALQRK*SLGKRQGFPKSRGIK 714
             +RP+W+ R   +  +*+L  R+G  K R ++
Sbjct: 48545 RRPKWKYRNSTIILQ*TLAARRGNQKRRNMQ 48453


>GI-6324971_09 gi-6324971_09.seq Continuation (9 of 10) of gi-6324971
             from base 800001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.9
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = -3 / -3

                                                         
Query: 624   QKKLSSTHYLLMIRSVICSICINGNRWRSNTWRKQQRTHAESSN 493
             Q K S   Y + I+ V C++C   N  RS     +  TH+ S N
Sbjct: 77757 QSKSS*R*YYIDIKKVYCTVCNLFNALRSKLRPAKVSTHSNS*N 77626


>GI-6323989_2 gi-6323989_2.seq Continuation (2 of 8) of gi-6323989 from
             base 100001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.9
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +3 / +3

                                 
Query: 492   CCCSLRVFVVVFSMCSTSIC 551
             CCC L +F+  F+    S C
Sbjct: 72606 CCCWLSIFIKEFN*AVGSNC 72665


>GI-6323501_04 gi-6323501_04.seq Continuation (4 of 10) of gi-6323501
             from base 300001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.9
 Identities = 11/44 (25%), Positives = 19/44 (43%)
 Frame = +3 / -1

                                                         
Query: 363   NIPGKCGVSVSFPINTKTNCNNLH*VIYQXXXXTXLASPLGVYC 494
             ++P   G S+      K   NNLH +++       L  P+ +Y 
Sbjct: 84140 SLPSNNGSSIGKF*KIKLPRNNLHRILFNISTFVLLIEPVIMYL 84009


>GI-6322016_3 gi-6322016_3.seq Continuation (3 of 5) of gi-6322016 from
             base 200001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.9
 Identities = 14/53 (26%), Positives = 21/53 (39%)
 Frame = +3 / -3

                                                                  
Query: 396   FPINTKTNCNNLH*VIYQXXXXTXLASPLGVYCCCSLRVFVVVFSMCSTSICC 554
             F    +  C  LH*++      T  +S     C CS +   +   +C  S CC
Sbjct: 71388 FEARPEVICAVLH*IVSWACAKTPESSAWQGACACSYQQKFLYSHLCFHSYCC 71230


>GI-14627172_3 gi-14627172_3.seq Continuation (3 of 8) of gi-14627172
             from base 200001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.9
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2 / +1

                            
Query: 772   YKGNKVWVNARGFPN 728
             +K N+ W N +GFPN
Sbjct: 46531 FKSNRCWEN*KGFPN 46575


>GI-14277709_2 gi-14277709_2.seq Continuation (2 of 7) of gi-14277709
             from base 100001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.9
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +1 / +1

                                      
Query: 772   KAISLFLHLGRFILKRVLTLFLLTQ 846
             KA  LFLH   +I   + T   +TQ
Sbjct: 80272 KATHLFLHTNIYIANFIYTFLYMTQ 80346


>GI-14270686_6 gi-14270686_6.seq Continuation (6 of 9) of gi-14270686
             from base 500001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.9
 Identities = 6/14 (42%), Positives = 11/14 (77%)
 Frame = +3 / -1

                           
Query: 486   VYCCCSLRVFVVVF 527
             ++CCC   +FV++F
Sbjct: 63920 LFCCCCFIIFVIIF 63879


>GI-6324971_10 gi-6324971_10.seq Continuation (10 of 10) of gi-6324971
             from base 900001
          Length = 48061

 Score = 27.2 bits (53), Expect = 8.9
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -1 / -2

                         
Query: 248   ARPRGCRRLPHR 213
             A P GCRR PHR
Sbjct: 21945 AAPEGCRRRPHR 21910


  Database: /home/pmiguel/yeast/yeast
    Posted date:  Oct 27, 2001  2:26 PM
  Number of letters in database: 13,206,306
  Number of sequences in database:  122
  
Lambda     K      H
   0.318    0.135    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 23106076
Number of Sequences: 122
Number of extensions: 303404
Number of successful extensions: 20817
Number of sequences better than 10.0: 29
length of query: 320
length of database: 4,402,102
effective HSP length: 44
effective length of query: 276
effective length of database: 4,396,734
effective search space: 1213498584
effective search space used: 1213498584
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 53 (27.2 bits)