TBLASTX 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCPvsSce/blast/0941_E01_I01ZS5.seq
         (883 letters)

Database: /home/pmiguel/yeast/yeast
           122 sequences; 13,206,306 total letters

Searching............................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

GI-6324971_04 gi-6324971_04.seq Continuation (4 of 10) of gi-632...    31  0.63
GI-6323989_8 gi-6323989_8.seq Continuation (8 of 8) of gi-632398...    30  1.2
GI-14389432_05 gi-14389432_05.seq Continuation (5 of 11) of gi-1...    29  1.6
GI-6323989_7 gi-6323989_7.seq Continuation (7 of 8) of gi-632398...    29  3.1
GI-6323989_2 gi-6323989_2.seq Continuation (2 of 8) of gi-632398...    29  3.1
GI-6323501_09 gi-6323501_09.seq Continuation (9 of 10) of gi-632...    29  3.1
GI-14389432_03 gi-14389432_03.seq Continuation (3 of 11) of gi-1...    29  3.1
GI-14277709_6 gi-14277709_6.seq Continuation (6 of 7) of gi-1427...    29  3.1
GI-6324971_09 gi-6324971_09.seq Continuation (9 of 10) of gi-632...    28  4.2
GI-6323501_01 gi-6323501_01.seq Continuation (1 of 10) of gi-632...    28  4.2
GI-14318439_11 gi-14318439_11.seq Continuation (11 of 11) of gi-...    28  4.2
GI-14318439_10 gi-14318439_10.seq Continuation (10 of 11) of gi-...    28  4.2
GI-14318434_04 gi-14318434_04.seq Continuation (4 of 11) of gi-1...    28  4.2
GI-14270686_9 gi-14270686_9.seq Continuation (9 of 9) of gi-1427...    28  4.2
GI-7839148_15 gi-7839148_15.seq Continuation (15 of 16) of gi-78...    28  5.8
GI-7839148_12 gi-7839148_12.seq Continuation (12 of 16) of gi-78...    28  5.8
GI-7839148_11 gi-7839148_11.seq Continuation (11 of 16) of gi-78...    28  5.8
GI-7839148_10 gi-7839148_10.seq Continuation (10 of 16) of gi-78...    28  5.8
GI-6862570_3 gi-6862570_3.seq Continuation (3 of 6) of gi-686257...    28  5.8
GI-6323989_4 gi-6323989_4.seq Continuation (4 of 8) of gi-632398...    28  5.8
GI-14389432_08 gi-14389432_08.seq Continuation (8 of 11) of gi-1...    28  5.8
GI-14318439_05 gi-14318439_05.seq Continuation (5 of 11) of gi-1...    28  5.8
GI-14318439_04 gi-14318439_04.seq Continuation (4 of 11) of gi-1...    28  5.8
GI-14277709_3 gi-14277709_3.seq Continuation (3 of 7) of gi-1427...    28  5.8
GI-6322016_1 gi-6322016_1.seq Continuation (1 of 5) of gi-632201...    27  8.0
GI-14270686_8 gi-14270686_8.seq Continuation (8 of 9) of gi-1427...    27  8.0
GI-10383748 gi|10383748|ref|NC_001135.2| Saccharomyces cerevisia...    27  8.0

>GI-6324971_04 gi-6324971_04.seq Continuation (4 of 10) of gi-6324971
             from base 300001
          Length = 110000

 Score = 30.8 bits (61), Expect = 0.63
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -1 / -2

                                                    
Query: 745   WCASRGAPLSLFTSSRLRWCPSEPFVSHKCVRVYYALFS 629
             WC     P +L+  + + WC SE F S K    +  LF+
Sbjct: 66619 WCVLLLCPATLWLWALIAWCDSEMFASSKDE*SFIILFT 66503


 Score = 27.6 bits (54), Expect = 5.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2 / -3

                           
Query: 147   ECTTLWMAAHWSCC 106
             EC+TLW+   W+ C
Sbjct: 91524 ECSTLWLGTLWALC 91483


 Score = 27.2 bits (53), Expect = 8.0
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +3 / -2

                              
Query: 294   LNWRRGGDWCTKRGEHE 344
             L WR    WC K G HE
Sbjct: 40915 LQWRNLQRWCLKHGYHE 40865


>GI-6323989_8 gi-6323989_8.seq Continuation (8 of 8) of gi-6323989 from
             base 700001
          Length = 84328

 Score = 29.9 bits (59), Expect = 1.2
 Identities = 8/13 (61%), Positives = 9/13 (68%)
 Frame = -2 / +1

                          
Query: 123   AHWSCCGICASSW 85
             AHW+CC  C S W
Sbjct: 35485 AHWNCC*ACVSYW 35523


 Score = 28.6 bits (56), Expect = 3.1
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -2 / +1

                              
Query: 507  RARPFSPPPFLLYYTLSV 454
            R R F PPP LL+Y L+V
Sbjct: 5386 RHRSFHPPPCLLHYPLTV 5439


>GI-14389432_05 gi-14389432_05.seq Continuation (5 of 11) of gi-14389432
             from base 400001
          Length = 110000

 Score = 29.5 bits (58), Expect = 1.6
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -1 / +3

                              
Query: 397   VCYYSASCPVSLRPVTL 347
             +C+Y ASCP  +RP ++
Sbjct: 24564 ICFYKASCPDGMRPQSI 24614


>GI-6323989_7 gi-6323989_7.seq Continuation (7 of 8) of gi-6323989 from
              base 600001
          Length = 110000

 Score = 28.6 bits (56), Expect = 3.1
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -2 / +2

                                
Query: 507    RARPFSPPPFLLYYTLSV 454
              R R F PPP LL+Y L+V
Sbjct: 105386 RHRSFHPPPCLLHYPLTV 105439


>GI-6323989_2 gi-6323989_2.seq Continuation (2 of 8) of gi-6323989 from
             base 100001
          Length = 110000

 Score = 28.6 bits (56), Expect = 3.1
 Identities = 10/24 (41%), Positives = 15/24 (61%)
 Frame = -1 / -1

                                     
Query: 427   LIAAICPLSFVCYYSASCPVSLRP 356
             L++A C  + + Y+S SCP  L P
Sbjct: 85568 LLSAYC*YNGLLYFSISCPAELNP 85497


 Score = 24.9 bits (48), Expect(2) = 8.8
 Identities = 16/50 (32%), Positives = 22/50 (44%)
 Frame = -1 / -1

                                                               
Query: 691   WCPSEPFVSHKCVRVYYALFSVPHGSLVVWCGPASRLAALCPCLINSSLL 542
             +CP  P ++     +Y +L+     SL V     S L A C C I   LL
Sbjct: 18245 FCPEMPAMAVLAFVLYPSLWICRECSLTVDGLRVSSL*AFCCCAIEGDLL 18096


 Score = 19.4 bits (36), Expect(2) = 8.8
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -3 / -3

                     
Query: 695   ALVPQ*TI 672
             ALVPQ T+
Sbjct: 18396 ALVPQVTL 18373


>GI-6323501_09 gi-6323501_09.seq Continuation (9 of 10) of gi-6323501
             from base 800001
          Length = 110000

 Score = 28.6 bits (56), Expect = 3.1
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3 / +3

                               
Query: 300   WRRGGDWCTKRGEHEQSV 353
             W RGG  C KRGE++  V
Sbjct: 64020 WARGGPSCDKRGEYKTIV 64073


>GI-14389432_03 gi-14389432_03.seq Continuation (3 of 11) of gi-14389432
             from base 200001
          Length = 110000

 Score = 28.6 bits (56), Expect = 3.1
 Identities = 11/23 (47%), Positives = 12/23 (51%)
 Frame = -3 / -2

                                    
Query: 662   *MCASVLCTLFCAPWFSCGMVRP 594
             * C SVLC L   P  S  + RP
Sbjct: 33241 *FCLSVLCCLISTPVLSLTLTRP 33173


>GI-14277709_6 gi-14277709_6.seq Continuation (6 of 7) of gi-14277709
             from base 500001
          Length = 110000

 Score = 28.6 bits (56), Expect = 3.1
 Identities = 9/16 (56%), Positives = 12/16 (74%)
 Frame = +2 / +1

                             
Query: 635   ECIIHSHTFMGNKWFT 682
             ECIIH+H F  ++W T
Sbjct: 40267 ECIIHNHCFTRSRWPT 40314


>GI-6324971_09 gi-6324971_09.seq Continuation (9 of 10) of gi-6324971
             from base 800001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.2
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -3 / +2

                                        
Query: 659   MCASVLCTLFCAPWFSCGMVRPRIPTC 579
             +CA+VLC    A  FSCG    R+  C
Sbjct: 27206 VCANVLCANILAMCFSCGFSFFRL*LC 27286


>GI-6323501_01 gi-6323501_01.seq Continuation (1 of 10) of gi-6323501
            from base 1
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.2
 Identities = 10/37 (27%), Positives = 23/37 (62%)
 Frame = -2 / -1

                                                 
Query: 879  PLFWVRCSFVRVTLLLSRSTGDSTCSISVFHCGASTN 769
            P+F++  S + +T L + + G S C++++ H   +T+
Sbjct: 7031 PVFYLANSIIVITNLQNFNAGTSRCAVTLVHI*GATS 6921


>GI-14318439_11 gi-14318439_11.seq Continuation (11 of 11) of
            gi-14318439 from base 1000001
          Length = 91284

 Score = 28.1 bits (55), Expect = 4.2
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -3 / +2

                                             
Query: 443  IHHHSSDRGYLSFKLCLLLFSVLPCVSQTGNTL 345
            + HH   +  LSF  CLL+ SVL  +    N++
Sbjct: 1073 LQHHMCRKLVLSFSYCLLMTSVLSQLFWNSNSI 1171


>GI-14318439_10 gi-14318439_10.seq Continuation (10 of 11) of gi-14318439
              from base 900001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.2
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -3 / +3

                                               
Query: 443    IHHHSSDRGYLSFKLCLLLFSVLPCVSQTGNTL 345
              + HH   +  LSF  CLL+ SVL  +    N++
Sbjct: 101073 LQHHMCRKLVLSFSYCLLMTSVLSQLFWNSNSI 101171


>GI-14318434_04 gi-14318434_04.seq Continuation (4 of 11) of gi-14318434
             from base 300001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.2
 Identities = 11/14 (78%), Positives = 12/14 (85%)
 Frame = +3 / +1

                           
Query: 504   HATRRLKVRLSPTS 545
             H TRRLKVR SP+S
Sbjct: 83701 HHTRRLKVRFSPSS 83742


>GI-14270686_9 gi-14270686_9.seq Continuation (9 of 9) of gi-14270686
             from base 800001
          Length = 13139

 Score = 28.1 bits (55), Expect = 4.2
 Identities = 10/37 (27%), Positives = 23/37 (62%)
 Frame = -2 / +1

                                                  
Query: 879   PLFWVRCSFVRVTLLLSRSTGDSTCSISVFHCGASTN 769
             P+F++  S + +T L + + G S C++++ H   +T+
Sbjct: 11647 PVFYLANSIIVITNLQNFNAGTSRCAVTLVHI*GATS 11757


>GI-7839148_15 gi-7839148_15.seq Continuation (15 of 16) of gi-7839148
             from base 1400001
          Length = 110000

 Score = 27.6 bits (54), Expect = 5.8
 Identities = 7/19 (36%), Positives = 13/19 (67%)
 Frame = -3 / +1

                                
Query: 650   SVLCTLFCAPWFSCGMVRP 594
             +V+   +C  W+ CG+V+P
Sbjct: 17299 NVIFHFYCLQWYLCGIVKP 17355


>GI-7839148_12 gi-7839148_12.seq Continuation (12 of 16) of gi-7839148
            from base 1100001
          Length = 110000

 Score = 27.6 bits (54), Expect = 5.8
 Identities = 10/38 (26%), Positives = 19/38 (49%)
 Frame = -3 / +2

                                                  
Query: 674  ICFP*MCASVLCTLFCAPWFSCGMVRPRIPTCRLVPLL 561
            +C   +  ++ C L+  P   CG +R ++P   +  LL
Sbjct: 2798 VCLVCVILALWCALWAPPQLECGELRYQVPLLTITYLL 2911


>GI-7839148_11 gi-7839148_11.seq Continuation (11 of 16) of gi-7839148
              from base 1000001
          Length = 110000

 Score = 27.6 bits (54), Expect = 5.8
 Identities = 10/38 (26%), Positives = 19/38 (49%)
 Frame = -3 / +3

                                                    
Query: 674    ICFP*MCASVLCTLFCAPWFSCGMVRPRIPTCRLVPLL 561
              +C   +  ++ C L+  P   CG +R ++P   +  LL
Sbjct: 102798 VCLVCVILALWCALWAPPQLECGELRYQVPLLTITYLL 102911


>GI-7839148_10 gi-7839148_10.seq Continuation (10 of 16) of gi-7839148
             from base 900001
          Length = 110000

 Score = 27.6 bits (54), Expect = 5.8
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = -3 / -2

                                                          
Query: 476   FCIIRYR*ICTIHHHSSDRGYLSFKLCLLLFSVLPCVSQTGNTLF 342
             FC +   *  T+ +H S +  L+  LC+   S  P +S+  NT +
Sbjct: 10105 FCNLPL**AQTLSYHCSIQASLNESLCMYDVSYTPSLSRKDNTKY 9971


>GI-6862570_3 gi-6862570_3.seq Continuation (3 of 6) of gi-6862570 from
             base 200001
          Length = 110000

 Score = 27.6 bits (54), Expect = 5.8
 Identities = 8/26 (30%), Positives = 17/26 (64%)
 Frame = -2 / +1

                                       
Query: 144   CTTLWMAAHWSCCGICASSWQHVAAP 67
             C ++ +    +CC +C+SS+ ++A P
Sbjct: 62863 CISVILILSDNCCNLCSSSFLNIARP 62940


>GI-6323989_4 gi-6323989_4.seq Continuation (4 of 8) of gi-6323989 from
             base 300001
          Length = 110000

 Score = 27.6 bits (54), Expect = 5.8
 Identities = 13/45 (28%), Positives = 21/45 (45%)
 Frame = -1 / +3

                                                          
Query: 472   VLYVIGKFVQFTTTPLIAAICPLSFVCYYSASCPVSLRPVTLCSC 338
             ++ +I  FV      +I  I   SF C+ S  CP++ R +    C
Sbjct: 47841 IIIIIIFFVFIFFEIIIRQIIIFSFACFTSFCCPITRRRIIHIFC 47975


>GI-14389432_08 gi-14389432_08.seq Continuation (8 of 11) of gi-14389432
             from base 700001
          Length = 110000

 Score = 27.6 bits (54), Expect = 5.8
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = -2 / -1

                                
Query: 837   LLSRSTGDSTCSISVFHCG 781
             LLS S GD+TCS SV   G
Sbjct: 88619 LLSLSLGDATCSTSVVSSG 88563


>GI-14318439_05 gi-14318439_05.seq Continuation (5 of 11) of
            gi-14318439 from base 400001
          Length = 110000

 Score = 27.6 bits (54), Expect = 5.8
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -1 / -2

                                  
Query: 430  PLIAAICPLSFVCYYSASCPVS 365
            PLI+ ICPL   C + A+ P S
Sbjct: 2080 PLISIICPLGRWCNHLATSPFS 2015


>GI-14318439_04 gi-14318439_04.seq Continuation (4 of 11) of gi-14318439
              from base 300001
          Length = 110000

 Score = 27.6 bits (54), Expect = 5.8
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -1 / -1

                                    
Query: 430    PLIAAICPLSFVCYYSASCPVS 365
              PLI+ ICPL   C + A+ P S
Sbjct: 102080 PLISIICPLGRWCNHLATSPFS 102015


 Score = 22.1 bits (42), Expect(2) = 8.8
 Identities = 9/17 (52%), Positives = 12/17 (69%)
 Frame = -3 / +1

                              
Query: 746   LVRITGSSALPLHLFAA 696
             L++   SS LPLHLF +
Sbjct: 38404 LIKPNLSSFLPLHLFGS 38454


 Score = 22.1 bits (42), Expect(2) = 8.8
 Identities = 6/14 (42%), Positives = 11/14 (77%)
 Frame = -1 / +3

                           
Query: 796   SFSLWRFHESLRFL 755
             +F++WR   +L+FL
Sbjct: 38346 TFAVWRNDNTLKFL 38387


>GI-14277709_3 gi-14277709_3.seq Continuation (3 of 7) of gi-14277709
             from base 200001
          Length = 110000

 Score = 27.6 bits (54), Expect = 5.8
 Identities = 12/32 (37%), Positives = 17/32 (52%)
 Frame = -1 / +3

                                             
Query: 457   GKFVQFTTTPLIAAICPLSFVCYYSASCPVSL 362
             G+ V  TTT L    CP ++   +S  CP+ L
Sbjct: 83748 GRLVTNTTTNLP*LSCPTTWSVVFSTDCPLLL 83843


>GI-6322016_1 gi-6322016_1.seq Continuation (1 of 5) of gi-6322016 from
             base 1
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.0
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2 / -3

                                      
Query: 513   ASRARPFSPPPFLLYYTLSVNLYNS 439
             +S A P   PP   +Y+ S +L NS
Sbjct: 95712 SSTANPLRRPPMQGHYSFSSSLLNS 95638


>GI-14270686_8 gi-14270686_8.seq Continuation (8 of 9) of gi-14270686
             from base 700001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.0
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2 / +3

                           
Query: 120   HWSCCGICASSWQH 79
             +W C G C  SW+H
Sbjct: 88086 YWICMGCCNFSWRH 88127


>GI-10383748 gi|10383748|ref|NC_001135.2| Saccharomyces cerevisiae
              chromosome III, complete c
          Length = 316613

 Score = 27.2 bits (53), Expect = 8.0
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -1 / -1

                                       
Query: 415    ICPLSFVCYYSASCPVSLRPVTLCS 341
              +CP+    YY   CP   R + +CS
Sbjct: 145898 LCPIILRLYYLCPCPCLGRCIRICS 145824


  Database: /home/pmiguel/yeast/yeast
    Posted date:  Oct 27, 2001  2:26 PM
  Number of letters in database: 13,206,306
  Number of sequences in database:  122
  
Lambda     K      H
   0.318    0.135    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 22749252
Number of Sequences: 122
Number of extensions: 317026
Number of successful extensions: 19955
Number of sequences better than 10.0: 27
length of query: 294
length of database: 4,402,102
effective HSP length: 44
effective length of query: 249
effective length of database: 4,396,734
effective search space: 1094786766
effective search space used: 1094786766
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 52 (26.7 bits)