TBLASTX 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCPvsSce/blast/0941_E03_I05ZS5.seq
         (909 letters)

Database: /home/pmiguel/yeast/yeast
           122 sequences; 13,206,306 total letters

Searching............................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

GI-7839148_13 gi-7839148_13.seq Continuation (13 of 16) of gi-78...    29  2.3
GI-6323501_03 gi-6323501_03.seq Continuation (3 of 10) of gi-632...    29  2.3
GI-6322016_3 gi-6322016_3.seq Continuation (3 of 5) of gi-632201...    29  2.3
GI-7839148_07 gi-7839148_07.seq Continuation (7 of 16) of gi-783...    29  3.2
GI-6323989_2 gi-6323989_2.seq Continuation (2 of 8) of gi-632398...    29  3.2
GI-6323989_3 gi-6323989_3.seq Continuation (3 of 8) of gi-632398...    28  4.4
GI-7276232_5 gi-7276232_5.seq Continuation (5 of 6) of gi-727623...    28  6.0
GI-7276232_4 gi-7276232_4.seq Continuation (4 of 6) of gi-727623...    28  6.0
GI-14318439_07 gi-14318439_07.seq Continuation (7 of 11) of gi-1...    28  6.0

>GI-7839148_13 gi-7839148_13.seq Continuation (13 of 16) of gi-7839148
             from base 1200001
          Length = 110000

 Score = 29.0 bits (57), Expect = 2.3
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +2 / -1

                                       
Query: 233   VPFFLSGIQRQAWALYRGFLRTARLK 310
             +P  LSG+Q++   LYR  +RTA  K
Sbjct: 33506 MPKRLSGLQKEVLHLYRASIRTAHTK 33429


>GI-6323501_03 gi-6323501_03.seq Continuation (3 of 10) of gi-6323501
             from base 200001
          Length = 110000

 Score = 29.0 bits (57), Expect = 2.3
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -1 / -3

                                            
Query: 333   SCGAPPGDLSRAVRRNPLYNAQACLWIPDRK 241
             SC + PG   + +  NP+YN +    I  RK
Sbjct: 53766 SCTSQPGAQEKKLNTNPIYNVKVLCLIGKRK 53674


>GI-6322016_3 gi-6322016_3.seq Continuation (3 of 5) of gi-6322016 from
             base 200001
          Length = 110000

 Score = 29.0 bits (57), Expect = 2.3
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -2 / +1

                              
Query: 614   ENTRHDHSKDGHHKKAS 564
             E  RHDH  D HHK  S
Sbjct: 74863 EEQRHDHDHDDHHKLLS 74913


>GI-7839148_07 gi-7839148_07.seq Continuation (7 of 16) of gi-7839148
             from base 600001
          Length = 110000

 Score = 28.6 bits (56), Expect = 3.2
 Identities = 14/43 (32%), Positives = 22/43 (50%)
 Frame = -3 / +2

                                                        
Query: 493   ASFISSVESPVISGFLS*WSSRFPLLIKYSMYTKFLRSTLLAF 365
             ++FISS+ S V     S W   FP ++     +  L S+L +F
Sbjct: 18974 SNFISSISSSVSHSVSSVWDLSFPFILFLLSRSHLLISSLYSF 19102


>GI-6323989_2 gi-6323989_2.seq Continuation (2 of 8) of gi-6323989 from
             base 100001
          Length = 110000

 Score = 28.6 bits (56), Expect = 3.2
 Identities = 10/23 (43%), Positives = 10/23 (43%)
 Frame = -1 / -1

                                    
Query: 438   GAAASLFSSNTQCTQSSCDRHSW 370
             G AA  F    Q  Q SC R  W
Sbjct: 97565 GLAAKRFFDGGQADQESCVRREW 97497


>GI-6323989_3 gi-6323989_3.seq Continuation (3 of 8) of gi-6323989 from
             base 200001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.4
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3 / +2

                                 
Query: 355   CAETPHSIVRRSSRGLEPCC 296
             C +TPH ++R  SR LE C 
Sbjct: 74297 CIQTPH*MLRLLSRQLEYCK 74356


>GI-7276232_5 gi-7276232_5.seq Continuation (5 of 6) of gi-7276232
           from base 400001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.0
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -2 / +2

                                                  
Query: 617 HENTRHDHSKDGHHKKASSSCISVSQQNRQDHARHVL*N 501
           H+NT+  + +DGHH         + ++ R    +H  *N
Sbjct: 347 HQNTQVRYRRDGHHGSVPQRIQLLQKRQRGHEKKHDQ*N 463


>GI-7276232_4 gi-7276232_4.seq Continuation (4 of 6) of gi-7276232 from
              base 300001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.0
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -2 / +3

                                                     
Query: 617    HENTRHDHSKDGHHKKASSSCISVSQQNRQDHARHVL*N 501
              H+NT+  + +DGHH         + ++ R    +H  *N
Sbjct: 100347 HQNTQVRYRRDGHHGSVPQRIQLLQKRQRGHEKKHDQ*N 100463


>GI-14318439_07 gi-14318439_07.seq Continuation (7 of 11) of gi-14318439
             from base 600001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.0
 Identities = 10/19 (52%), Positives = 13/19 (67%)
 Frame = +1 / -2

                                
Query: 523   *SWRFCWETLIQEELAFLW 579
             *SWR  WE  I++EL+  W
Sbjct: 10327 *SWRSSWEFHIKQELSNFW 10271


  Database: /home/pmiguel/yeast/yeast
    Posted date:  Oct 27, 2001  2:26 PM
  Number of letters in database: 13,206,306
  Number of sequences in database:  122
  
Lambda     K      H
   0.318    0.135    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 17371963
Number of Sequences: 122
Number of extensions: 201034
Number of successful extensions: 12745
Number of sequences better than 10.0: 9
length of query: 303
length of database: 4,402,102
effective HSP length: 44
effective length of query: 258
effective length of database: 4,396,734
effective search space: 1134357372
effective search space used: 1134357372
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 53 (27.2 bits)