TBLASTX 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCPvsSce/blast/0941_E11_I21ZS5.seq
         (908 letters)

Database: /home/pmiguel/yeast/yeast
           122 sequences; 13,206,306 total letters

Searching............................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

GI-14277709_1 gi-14277709_1.seq Continuation (1 of 7) of gi-1427...    32  0.25
GI-7839148_15 gi-7839148_15.seq Continuation (15 of 16) of gi-78...    31  0.65
GI-7839148_09 gi-7839148_09.seq Continuation (9 of 16) of gi-783...    31  0.65
GI-7839148_08 gi-7839148_08.seq Continuation (8 of 16) of gi-783...    31  0.65
GI-14318439_06 gi-14318439_06.seq Continuation (6 of 11) of gi-1...    31  0.65
GI-7839148_05 gi-7839148_05.seq Continuation (5 of 16) of gi-783...    26  0.76
GI-14627172_1 gi-14627172_1.seq Continuation (1 of 8) of gi-1462...    30  0.90
GI-6862570_2 gi-6862570_2.seq Continuation (2 of 6) of gi-686257...    30  1.2
GI-14627172_3 gi-14627172_3.seq Continuation (3 of 8) of gi-1462...    30  1.2
GI-6324971_08 gi-6324971_08.seq Continuation (8 of 10) of gi-632...    29  1.7
GI-6323501_06 gi-6323501_06.seq Continuation (6 of 10) of gi-632...    29  2.3
GI-10383748 gi|10383748|ref|NC_001135.2| Saccharomyces cerevisia...    29  2.3
GI-14627172_7 gi-14627172_7.seq Continuation (7 of 8) of gi-1462...    29  3.2
GI-14627172_8 gi-14627172_8.seq Continuation (8 of 8) of gi-1462...    29  3.2
GI-7839148_12 gi-7839148_12.seq Continuation (12 of 16) of gi-78...    28  4.4
GI-6323501_01 gi-6323501_01.seq Continuation (1 of 10) of gi-632...    28  4.4
GI-6322016_3 gi-6322016_3.seq Continuation (3 of 5) of gi-632201...    28  4.4
GI-14318434_09 gi-14318434_09.seq Continuation (9 of 11) of gi-1...    28  4.4
GI-7839148_01 gi-7839148_01.seq Continuation (1 of 16) of gi-783...    28  6.0
GI-7276232_3 gi-7276232_3.seq Continuation (3 of 6) of gi-727623...    28  6.0
GI-14270686_5 gi-14270686_5.seq Continuation (5 of 9) of gi-1427...    28  6.0
GI-7839148_07 gi-7839148_07.seq Continuation (7 of 16) of gi-783...    27  8.3
GI-7839148_02 gi-7839148_02.seq Continuation (2 of 16) of gi-783...    27  8.3
GI-6324971_05 gi-6324971_05.seq Continuation (5 of 10) of gi-632...    27  8.3
GI-14318439_07 gi-14318439_07.seq Continuation (7 of 11) of gi-1...    27  8.3
GI-14318439_02 gi-14318439_02.seq Continuation (2 of 11) of gi-1...    27  8.3
GI-14318434_03 gi-14318434_03.seq Continuation (3 of 11) of gi-1...    27  8.3
GI-6323501_04 gi-6323501_04.seq Continuation (4 of 10) of gi-632...    23  9.1
GI-6323501_03 gi-6323501_03.seq Continuation (3 of 10) of gi-632...    23  9.1

>GI-14277709_1 gi-14277709_1.seq Continuation (1 of 7) of gi-14277709
             from base 1
          Length = 110000

 Score = 32.2 bits (64), Expect = 0.25
 Identities = 11/28 (39%), Positives = 16/28 (56%)
 Frame = +3 / +3

                                         
Query: 252   TRTWSCSTGARSARAAPPEMRRTLPGPC 335
             T+ W+CST A   R A    ++ +P PC
Sbjct: 99126 TKCWTCSTKASRHRPANSTAKKHMPSPC 99209


>GI-7839148_15 gi-7839148_15.seq Continuation (15 of 16) of gi-7839148
             from base 1400001
          Length = 110000

 Score = 30.8 bits (61), Expect = 0.65
 Identities = 13/41 (31%), Positives = 22/41 (52%)
 Frame = -2 / -3

                                                      
Query: 604   LRVIPSRPQDSXQGEAFEVTRSTSNGQSKQPRPIIKQITCN 482
             +R I + P+DS + +    T S  N  +K+PR   K  +C+
Sbjct: 83310 IRSIINHPEDSARAKERSETNSPKNNGNKKPRKKRKTFSCD 83188


 Score = 28.6 bits (56), Expect = 3.2
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +3 / +3

                                    
Query: 789   SSCTAHNLSRRRS*QCAPTNISV 857
             SS T+HN   RRS +CAP  + V
Sbjct: 36873 SSWTSHNKRNRRSRKCAPPCLDV 36941


>GI-7839148_09 gi-7839148_09.seq Continuation (9 of 16) of gi-7839148
            from base 800001
          Length = 110000

 Score = 30.8 bits (61), Expect = 0.65
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = +3 / +1

                                                        
Query: 303  PEMRRTLPGPCRHRAHGAWPLCCVLHLAAHDELHGRVQLKKNEV 434
            P +R      C  R H   P C  LHL  H  LH  + L ++ V
Sbjct: 1828 PRLRNWFRNYCYPRPHHPRPHCLHLHLHLHLHLHLHLHLHRHGV 1959


>GI-7839148_08 gi-7839148_08.seq Continuation (8 of 16) of gi-7839148 from
              base 700001
          Length = 110000

 Score = 30.8 bits (61), Expect = 0.65
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = +3 / +2

                                                          
Query: 303    PEMRRTLPGPCRHRAHGAWPLCCVLHLAAHDELHGRVQLKKNEV 434
              P +R      C  R H   P C  LHL  H  LH  + L ++ V
Sbjct: 101828 PRLRNWFRNYCYPRPHHPRPHCLHLHLHLHLHLHLHLHLHRHGV 101959


>GI-14318439_06 gi-14318439_06.seq Continuation (6 of 11) of gi-14318439
             from base 500001
          Length = 110000

 Score = 30.8 bits (61), Expect = 0.65
 Identities = 11/28 (39%), Positives = 14/28 (49%)
 Frame = +3 / -3

                                         
Query: 498   LIIGRGCLDWPLLVDLVTSNASPCXLSW 581
             +++GRGCL W   V   T  A    L W
Sbjct: 34485 VVVGRGCLQWKSRVRFATGLAVDVYLKW 34402


>GI-7839148_05 gi-7839148_05.seq Continuation (5 of 16) of gi-7839148
             from base 400001
          Length = 110000

 Score = 26.3 bits (51), Expect(2) = 0.76
 Identities = 10/31 (32%), Positives = 21/31 (67%)
 Frame = +1 / +3

                                            
Query: 709   LISVGSLPSVQMMVLIGSTVTHSSHSSRPVL 801
             ++++GS+P   + VL  + ++ +S S+R VL
Sbjct: 66213 IVTMGSMPMPSLKVL*ETLMSKASISARLVL 66305


 Score = 22.1 bits (42), Expect(2) = 0.76
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3 / +2

                           
Query: 588   DGITRNCSNSGAFN 629
             D ++R+ + SGAFN
Sbjct: 66161 DALSRHTTRSGAFN 66202


>GI-14627172_1 gi-14627172_1.seq Continuation (1 of 8) of gi-14627172
             from base 1
          Length = 110000

 Score = 30.4 bits (60), Expect = 0.90
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = -3 / +3

                                                    
Query: 399   VHHALQDGEHNTKARLREHDVGTDLAASVASQAVLPLRS 283
             VH   +   HN + R+R+  + T L  S ++  +LPLR+
Sbjct: 50214 VHIVAETAYHNCQ*RIRKSAIETSLGKSTSTCLMLPLRN 50330


>GI-6862570_2 gi-6862570_2.seq Continuation (2 of 6) of gi-6862570 from
             base 100001
          Length = 110000

 Score = 29.9 bits (59), Expect = 1.2
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +3 / -3

                                                      
Query: 414   QLKKNEVRFWIVV*LFILLTXTGLQVICLIIGRGCLDWPLL 536
             Q+  + V  W++V LF +    GL VICLI+    L W L+
Sbjct: 56112 QIAVSAVLLWMIVVLFGVP*IQGLSVICLIVH*VGLLWILI 55990


>GI-14627172_3 gi-14627172_3.seq Continuation (3 of 8) of gi-14627172
             from base 200001
          Length = 110000

 Score = 29.9 bits (59), Expect = 1.2
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +1 / -1

                                
Query: 523   IGHCWLILLPQMLPLAXYL 579
             IG  WL+LLPQ++P+   L
Sbjct: 11855 IGESWLVLLPQLVPVIAEL 11799


>GI-6324971_08 gi-6324971_08.seq Continuation (8 of 10) of gi-6324971
             from base 700001
          Length = 110000

 Score = 29.5 bits (58), Expect = 1.7
 Identities = 11/30 (36%), Positives = 15/30 (49%)
 Frame = -1 / -3

                                           
Query: 773   WVTVEPMSTIICTEGKEPTDIRVVLMRMVF 684
             W    P   IICTEG+ PT + +   R  +
Sbjct: 44973 WKCCNPRRVIICTEGR*PT*LGITWKRRTY 44884


>GI-6323501_06 gi-6323501_06.seq Continuation (6 of 10) of gi-6323501
             from base 500001
          Length = 110000

 Score = 29.0 bits (57), Expect = 2.3
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = -2 / -2

                                              
Query: 535   SNGQSKQPRPIIKQITCNPVSVSNINNYTTIQN 437
             +N +SKQP P + ++T     ++NIN   T+++
Sbjct: 82894 TNLKSKQPHPELNKLTKAASGLANINAQVTVED 82796


>GI-10383748 gi|10383748|ref|NC_001135.2| Saccharomyces cerevisiae
              chromosome III, complete c
          Length = 316613

 Score = 29.0 bits (57), Expect = 2.3
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1 / +1

                           
Query: 299    CCPCAPGSGTARP 261
              CCPC   SGT+RP
Sbjct: 264262 CCPCTTLSGTSRP 264300


>GI-14627172_7 gi-14627172_7.seq Continuation (7 of 8) of gi-14627172
             from base 600001
          Length = 110000

 Score = 28.6 bits (56), Expect = 3.2
 Identities = 10/24 (41%), Positives = 15/24 (61%)
 Frame = -1 / +3

                                     
Query: 356   GSVSTMSARTWQRPSHLRRCCPCA 285
             GS++T+S R+W+R      C  CA
Sbjct: 20925 GSITTISVRSWKREFRPDPCFTCA 20996


>GI-14627172_8 gi-14627172_8.seq Continuation (8 of 8) of gi-14627172
             from base 700001
          Length = 45444

 Score = 28.6 bits (56), Expect = 3.2
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +3 / +3

                                 
Query: 696   HQNNPNIRWLFALCTDDGAH 755
             H+ NPN  WL  L  DD  H
Sbjct: 16203 HKENPNTSWL*MLSFDDNIH 16262


>GI-7839148_12 gi-7839148_12.seq Continuation (12 of 16) of gi-7839148
             from base 1100001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.4
 Identities = 11/31 (35%), Positives = 18/31 (57%)
 Frame = +2 / -2

                                            
Query: 167   MQVFLCIHEDLAT*IFTVFSGSDFLGKIDPY 259
             ++ FL IH+      F + S SDF+  ++PY
Sbjct: 59596 LRTFLLIHDHALICAFEMHSNSDFIFLMNPY 59504


>GI-6323501_01 gi-6323501_01.seq Continuation (1 of 10) of gi-6323501
             from base 1
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.4
 Identities = 16/65 (24%), Positives = 31/65 (47%)
 Frame = -1 / -2

                                                                         
Query: 890   FRPLLYRLIEHYTDISWRTLLGASAR*IVGSTGREECDEWVTVEPMSTIICTEGKEPTDI 711
             FR    +++E  + +  RTL+G S+R +  S     C  W+     S+II  +  +    
Sbjct: 93142 FRSASTKVMEPKSILKNRTLIGCSSRSLGISILCNSCI*WIMYSFSSSIIKVQSLKKASF 92963

                  
Query: 710   RVVLM 696
             ++ L+
Sbjct: 92962 QITLL 92948


 Score = 27.6 bits (54), Expect = 6.0
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -1 / -2

                                      
Query: 362   RPGSVSTMSARTWQRPSHLRRCCPC 288
             R G +S M  R W RP  +  CC C
Sbjct: 44767 RIGILSDMCCRRWLRPWLI*CCCAC 44693


>GI-6322016_3 gi-6322016_3.seq Continuation (3 of 5) of gi-6322016 from
             base 200001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.4
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +1 / -3

                                      
Query: 250   RPVHGRAVPEPGAQGQHRLRCDGRC 324
             R   G ++ +P  QGQ   RC  RC
Sbjct: 21627 RYCRGHSISDPSRQGQQNCRCCFRC 21553


>GI-14318434_09 gi-14318434_09.seq Continuation (9 of 11) of gi-14318434
             from base 800001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.4
 Identities = 12/32 (37%), Positives = 18/32 (55%)
 Frame = +3 / -1

                                             
Query: 777   VALFSSCTAHNLSRRRS*QCAPTNISVMFYET 872
             VALF + + HNLS+  S     T  ++ F+ T
Sbjct: 43172 VALFGTISLHNLSKLMSNNDTSTQTNLQFFNT 43077


>GI-7839148_01 gi-7839148_01.seq Continuation (1 of 16) of gi-7839148
             from base 1
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.0
 Identities = 10/24 (41%), Positives = 15/24 (61%)
 Frame = -2 / +2

                                     
Query: 82    EHLAWASMSTYNTVVNCLERVAXE 11
             EH+ WA +ST+ TV    E+ + E
Sbjct: 40433 EHIVWAILSTHETVDMMAEQFSSE 40504


>GI-7276232_3 gi-7276232_3.seq Continuation (3 of 6) of gi-7276232 from
             base 200001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.0
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +2 / +2

                                    
Query: 617   RRI*YHMLPLGDFCWY*FYPRFR 685
             +RI + ++   D C++ FYPRFR
Sbjct: 91589 KRISFWVIQSPDDCFFFFYPRFR 91657


>GI-14270686_5 gi-14270686_5.seq Continuation (5 of 9) of gi-14270686
             from base 400001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.0
 Identities = 11/28 (39%), Positives = 16/28 (56%)
 Frame = +2 / -2

                                         
Query: 176   FLCIHEDLAT*IFTVFSGSDFLGKIDPY 259
             F+ IH+D A  +F+     DF+  I PY
Sbjct: 22846 FIRIHQDNAKPLFSFLQNLDFIESIIPY 22763


>GI-7839148_07 gi-7839148_07.seq Continuation (7 of 16) of gi-7839148
             from base 600001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.3
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1 / +3

                              
Query: 175   FFVYSRRPCYLNIHCVL 225
             F+ +   P YL++HC+L
Sbjct: 19050 FYFFYHAPTYLSVHCIL 19100


>GI-7839148_02 gi-7839148_02.seq Continuation (2 of 16) of gi-7839148
             from base 100001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.3
 Identities = 12/32 (37%), Positives = 16/32 (49%)
 Frame = -3 / -3

                                             
Query: 447   QSRISPHSSSAELYRVVHHALQDGEHNTKARL 352
             +SR  PHS+S +L R   +    G H    RL
Sbjct: 60585 KSRAFPHSTSDQLERPCRNFFTSGSHTNDNRL 60490


>GI-6324971_05 gi-6324971_05.seq Continuation (5 of 10) of gi-6324971
             from base 400001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.3
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3 / -3

                                      
Query: 561   SPCXLSWGRDGITRNCSNSGAFNII 635
             SPC +SW   G+T    NS    I+
Sbjct: 98979 SPCKISWLMSGLTPTFDNSQRLQIL 98905


 Score = 27.2 bits (53), Expect = 8.3
 Identities = 11/23 (47%), Positives = 13/23 (55%)
 Frame = +3 / -1

                                    
Query: 261   WSCSTGARSARAAPPEMRRTLPG 329
             W  S    +ARA   E+ RTLPG
Sbjct: 47021 WLASPECAAARAEVEELHRTLPG 46953


>GI-14318439_07 gi-14318439_07.seq Continuation (7 of 11) of gi-14318439
             from base 600001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.3
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1 / +2

                                       
Query: 320   RPSHLRRCCPCAPGSGTARPCTGLSS 243
             RP  LR C     G+GT+ P  G +S
Sbjct: 31481 RPDQLRNCLSIGGGTGTSTPYFGGNS 31558


>GI-14318439_02 gi-14318439_02.seq Continuation (2 of 11) of gi-14318439
             from base 100001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.3
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +2 / -3

                                        
Query: 761   LPSPTRRTLLVLYCPQSISQTLLAMCA 841
             L   TRR+LLV   PQ++  T++A+ A
Sbjct: 55773 LAMKTRRSLLVHQIPQNLLATIVAIAA 55693


>GI-14318434_03 gi-14318434_03.seq Continuation (3 of 11) of gi-14318434
             from base 200001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.3
 Identities = 10/26 (38%), Positives = 13/26 (49%)
 Frame = +3 / +1

                                       
Query: 357   WPLCCVLHLAAHDELHGRVQLKKNEV 434
             W  CCVLH +  D L+   Q +   V
Sbjct: 79825 WNYCCVLHGSHRDHLYDSFQRRLRHV 79902


>GI-6323501_04 gi-6323501_04.seq Continuation (4 of 10) of gi-6323501
            from base 300001
          Length = 110000

 Score = 23.1 bits (44), Expect(2) = 9.1
 Identities = 11/34 (32%), Positives = 16/34 (46%)
 Frame = -1 / -3

                                              
Query: 395  IMRCKMENTTQRPGSVSTMSARTWQRPSHLRRCC 294
            +MR   + T     S S  SA+  +R  H+R  C
Sbjct: 6423 VMRMVKKLTKNTKNSYSDFSAKKPERELHVRLTC 6322


 Score = 21.2 bits (40), Expect(2) = 9.1
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -1 / -3

                             
Query: 272  TARPCTGLSSQGNRCRR 222
            T  P   L  QGNR RR
Sbjct: 6327 TCLPSG*LCLQGNRSRR 6277


>GI-6323501_03 gi-6323501_03.seq Continuation (3 of 10) of gi-6323501 from
              base 200001
          Length = 110000

 Score = 23.1 bits (44), Expect(2) = 9.1
 Identities = 11/34 (32%), Positives = 16/34 (46%)
 Frame = -1 / -2

                                                
Query: 395    IMRCKMENTTQRPGSVSTMSARTWQRPSHLRRCC 294
              +MR   + T     S S  SA+  +R  H+R  C
Sbjct: 106423 VMRMVKKLTKNTKNSYSDFSAKKPERELHVRLTC 106322


 Score = 21.2 bits (40), Expect(2) = 9.1
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -1 / -2

                               
Query: 272    TARPCTGLSSQGNRCRR 222
              T  P   L  QGNR RR
Sbjct: 106327 TCLPSG*LCLQGNRSRR 106277


  Database: /home/pmiguel/yeast/yeast
    Posted date:  Oct 27, 2001  2:26 PM
  Number of letters in database: 13,206,306
  Number of sequences in database:  122
  
Lambda     K      H
   0.318    0.135    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 27189064
Number of Sequences: 122
Number of extensions: 400250
Number of successful extensions: 22312
Number of sequences better than 10.0: 29
length of query: 302
length of database: 4,402,102
effective HSP length: 44
effective length of query: 258
effective length of database: 4,396,734
effective search space: 1134357372
effective search space used: 1134357372
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 53 (27.2 bits)