TBLASTX 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCPvsSce/blast/0941_E12_I23ZS5.seq
         (907 letters)

Database: /home/pmiguel/yeast/yeast
           122 sequences; 13,206,306 total letters

Searching............................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

GI-14389432_11 gi-14389432_11.seq Continuation (11 of 11) of gi-...    29  4.3
GI-14277709_6 gi-14277709_6.seq Continuation (6 of 7) of gi-1427...    28  4.4

>GI-14389432_11 gi-14389432_11.seq Continuation (11 of 11) of
             gi-14389432 from base 1000001
          Length = 78173

 Score = 29.0 bits (57), Expect = 4.3
 Identities = 9/17 (52%), Positives = 13/17 (75%)
 Frame = +2 / +3

                              
Query: 38    NSSTPPTSSRIPVVGEP 88
             NSS PPT+ R+P + +P
Sbjct: 14712 NSSGPPTTCRLPAISDP 14762


>GI-14277709_6 gi-14277709_6.seq Continuation (6 of 7) of gi-14277709
             from base 500001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.4
 Identities = 11/23 (47%), Positives = 13/23 (55%)
 Frame = -1 / +3

                                    
Query: 616   CLPITPKKPKHDWLVPTGSRSSG 548
             C P  PK P  D  VP+G  S+G
Sbjct: 26523 CFPSRPKAPPLDSKVPSGHTSAG 26591


  Database: /home/pmiguel/yeast/yeast
    Posted date:  Oct 27, 2001  2:26 PM
  Number of letters in database: 13,206,306
  Number of sequences in database:  122
  
Lambda     K      H
   0.318    0.135    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 5583740
Number of Sequences: 122
Number of extensions: 31192
Number of successful extensions: 2747
Number of sequences better than 10.0: 2
length of query: 302
length of database: 4,402,102
effective HSP length: 44
effective length of query: 257
effective length of database: 4,396,734
effective search space: 1129960638
effective search space used: 1129960638
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 53 (27.2 bits)