TBLASTX 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCPvsSce/blast/0941_F01_K01ZS5.seq
         (916 letters)

Database: /home/pmiguel/yeast/yeast
           122 sequences; 13,206,306 total letters

Searching............................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

GI-6862570_2 gi-6862570_2.seq Continuation (2 of 6) of gi-686257...    30  0.90
GI-6862570_5 gi-6862570_5.seq Continuation (5 of 6) of gi-686257...    24  2.3
GI-7839148_15 gi-7839148_15.seq Continuation (15 of 16) of gi-78...    29  2.3
GI-14389432_05 gi-14389432_05.seq Continuation (5 of 11) of gi-1...    29  2.3
GI-14389432_07 gi-14389432_07.seq Continuation (7 of 11) of gi-1...    29  3.2
GI-14318450 gi|14318450|ref|NC_001138.2| Saccharomyces cerevisia...    28  4.4
GI-14389432_09 gi-14389432_09.seq Continuation (9 of 11) of gi-1...    28  4.4
GI-14277709_4 gi-14277709_4.seq Continuation (4 of 7) of gi-1427...    28  4.4
GI-14270686_3 gi-14270686_3.seq Continuation (3 of 9) of gi-1427...    28  4.4
GI-6322016_5 gi-6322016_5.seq Continuation (5 of 5) of gi-632201...    28  4.4
GI-7276232_3 gi-7276232_3.seq Continuation (3 of 6) of gi-727623...    28  6.1
GI-6323501_03 gi-6323501_03.seq Continuation (3 of 10) of gi-632...    28  6.1
GI-14389432_01 gi-14389432_01.seq Continuation (1 of 11) of gi-1...    28  6.1
GI-14318434_05 gi-14318434_05.seq Continuation (5 of 11) of gi-1...    28  6.1
GI-14318434_04 gi-14318434_04.seq Continuation (4 of 11) of gi-1...    28  6.1
GI-14318434_01 gi-14318434_01.seq Continuation (1 of 11) of gi-1...    28  6.1
GI-14270686_1 gi-14270686_1.seq Continuation (1 of 9) of gi-1427...    28  6.1
GI-7839148_06 gi-7839148_06.seq Continuation (6 of 16) of gi-783...    26  6.8
GI-7839148_12 gi-7839148_12.seq Continuation (12 of 16) of gi-78...    27  8.4
GI-7839148_10 gi-7839148_10.seq Continuation (10 of 16) of gi-78...    27  8.4
GI-7839148_03 gi-7839148_03.seq Continuation (3 of 16) of gi-783...    27  8.4
GI-7276232_5 gi-7276232_5.seq Continuation (5 of 6) of gi-727623...    27  8.4
GI-6324971_07 gi-6324971_07.seq Continuation (7 of 10) of gi-632...    27  8.4
GI-6323989_5 gi-6323989_5.seq Continuation (5 of 8) of gi-632398...    27  8.4
GI-6323989_4 gi-6323989_4.seq Continuation (4 of 8) of gi-632398...    27  8.4
GI-6323989_1 gi-6323989_1.seq Continuation (1 of 8) of gi-632398...    27  8.4
GI-6322016_4 gi-6322016_4.seq Continuation (4 of 5) of gi-632201...    27  8.4

>GI-6862570_2 gi-6862570_2.seq Continuation (2 of 6) of gi-6862570 from
             base 100001
          Length = 110000

 Score = 30.4 bits (60), Expect = 0.90
 Identities = 12/46 (26%), Positives = 25/46 (54%)
 Frame = -2 / +1

                                                           
Query: 585   NIINPHCSFCLQLLSIYTPGAQFRKSNSYLLPLSSVLRYKQNSHNF 448
             N + P C FC   +SI      +  S+  L  LS++  ++++++N+
Sbjct: 19075 NFVTPKCIFCTTRVSIIKIHIAYGFSSIILCLLSAISTFRRSNNNY 19212


>GI-6862570_5 gi-6862570_5.seq Continuation (5 of 6) of gi-6862570 from
             base 400001
          Length = 110000

 Score = 24.0 bits (46), Expect(2) = 2.3
 Identities = 7/11 (63%), Positives = 11/11 (99%)
 Frame = +2 / +2

                        
Query: 749   RILLMVIHICL 781
             +ILL++IHIC+
Sbjct: 61613 KILLLIIHICI 61645


 Score = 22.6 bits (43), Expect(2) = 2.3
 Identities = 7/13 (53%), Positives = 11/13 (83%)
 Frame = +1 / +3

                          
Query: 781   LILYNHLCHLVLC 819
             LI+Y +LC+ V+C
Sbjct: 61740 LIIYIYLCNYVVC 61778


>GI-7839148_15 gi-7839148_15.seq Continuation (15 of 16) of gi-7839148
             from base 1400001
          Length = 110000

 Score = 29.0 bits (57), Expect = 2.3
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +1 / -2

                                                  
Query: 730   NLSLLCTHFTYGYSYLSLILYNHLCHLVLCYIFNSFV 840
             +L L C HF   + ++      + C L LCY   SF+
Sbjct: 56644 HLPLFC*HFFIVFVFVCFCFCFYFCLLFLCYFVLSFL 56534


>GI-14389432_05 gi-14389432_05.seq Continuation (5 of 11) of gi-14389432
             from base 400001
          Length = 110000

 Score = 29.0 bits (57), Expect = 2.3
 Identities = 10/22 (45%), Positives = 13/22 (58%)
 Frame = +1 / +1

                                   
Query: 691   VNFFPNLTHTDTCNLSLLCTHF 756
             VNFFP L H + C++   C  F
Sbjct: 49894 VNFFPRLHHGNDCSIFTSCLFF 49959


>GI-14389432_07 gi-14389432_07.seq Continuation (7 of 11) of gi-14389432
             from base 600001
          Length = 110000

 Score = 28.6 bits (56), Expect = 3.2
 Identities = 8/27 (29%), Positives = 16/27 (58%)
 Frame = -3 / -1

                                        
Query: 560   FVYSCCQSILRELSLERAILIFCLSLL 480
             FV  CC  ++    LE  +L++C+ ++
Sbjct: 88259 FVEKCCFHVIESYILEEKLLVYCVYII 88179


>GI-14318450 gi|14318450|ref|NC_001138.2| Saccharomyces cerevisiae
              chromosome VI, complete ch
          Length = 270148

 Score = 28.1 bits (55), Expect = 4.4
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +3 / -3

                                       
Query: 753    FYLWLFIFVSDTLQPSLPPSFVLYF 827
              ++   F F+S ++QP  PP+  LYF
Sbjct: 260789 YFTITFFFLSFSIQPIKPPATFLYF 260715


 Score = 27.6 bits (54), Expect = 6.1
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = +2 / +1

                           
Query: 863   DTLRYFYLLFSADL 904
             D LRY Y+LFSAD+
Sbjct: 89350 DCLRYLYVLFSADV 89391


 Score = 27.2 bits (53), Expect = 8.4
 Identities = 8/23 (34%), Positives = 17/23 (73%)
 Frame = +3 / -1

                                     
Query: 714    SYRHLQLKSSVYAFYLWLFIFVS 782
              SY   +++ +V++FY W+F+ +S
Sbjct: 246265 SYYQQRVQRTVHSFYSWMFLHLS 246197


>GI-14389432_09 gi-14389432_09.seq Continuation (9 of 11) of gi-14389432
             from base 800001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.4
 Identities = 11/24 (45%), Positives = 13/24 (53%)
 Frame = -2 / +2

                                     
Query: 603   VATTYINIINPHCSFCLQLLSIYT 532
             +   YIN IN   SFC  + SI T
Sbjct: 47477 IVLIYINFINTDTSFCTSIASITT 47548


>GI-14277709_4 gi-14277709_4.seq Continuation (4 of 7) of gi-14277709
             from base 300001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.4
 Identities = 11/32 (34%), Positives = 22/32 (68%)
 Frame = +2 / -1

                                             
Query: 707   ISLIQTLAT*VFCVRILLMVIHICL*YFTTIF 802
             IS+++ +++   C+  L++ I+IC *YF  I+
Sbjct: 78653 ISIMRNVSSVFQCLAELVIYIYICT*YFIRIY 78558


>GI-14270686_3 gi-14270686_3.seq Continuation (3 of 9) of gi-14270686
             from base 200001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.4
 Identities = 12/28 (42%), Positives = 16/28 (56%)
 Frame = +3 / +3

                                         
Query: 717   YRHLQLKSSVYAFYLWLFIFVSDTLQPS 800
             YR    K   Y FY++ F+F  DTL+ S
Sbjct: 56820 YRF**KKIGFYLFYIY*FVFPGDTLEKS 56903


>GI-6322016_5 gi-6322016_5.seq Continuation (5 of 5) of gi-6322016 from
             base 400001
          Length = 39885

 Score = 28.1 bits (55), Expect = 4.4
 Identities = 11/28 (39%), Positives = 16/28 (56%)
 Frame = +2 / +3

                                         
Query: 545   SNCKQKEQWGLIIFIYVVATPLPFVNLV 628
             SNC+     G+ I I    TP+PF+ +V
Sbjct: 31854 SNCRYNVCGGVPISILTTYTPIPFITVV 31937


>GI-7276232_3 gi-7276232_3.seq Continuation (3 of 6) of gi-7276232 from
             base 200001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.1
 Identities = 11/19 (57%), Positives = 13/19 (67%)
 Frame = +1 / -2

                                
Query: 802   CHLVLCYIFNSFVGLNCVT 858
             C L+L Y+F SFVG N  T
Sbjct: 71986 CSLILKYLFLSFVGSNDAT 71930


>GI-6323501_03 gi-6323501_03.seq Continuation (3 of 10) of gi-6323501
             from base 200001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.1
 Identities = 13/29 (44%), Positives = 18/29 (61%)
 Frame = +2 / -1

                                          
Query: 716   IQTLAT*VFCVRILLMVIHICL*YFTTIF 802
             ++ + T V  VRI L V+  C  YFTTI+
Sbjct: 56156 LRIIKTVVLQVRINLSVVPSCKEYFTTIY 56070


>GI-14389432_01 gi-14389432_01.seq Continuation (1 of 11) of gi-14389432
             from base 1
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.1
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +2 / -1

                                               
Query: 338   TDPSNQNNETPWTALINVPSRYSIVSDLSHISLD 439
             T  S  +N T  T L N+P+R  I   L+H+  D
Sbjct: 69290 TQRSCDSNITSLTELTNIPARIKIEFGLTHVIND 69189


>GI-14318434_05 gi-14318434_05.seq Continuation (5 of 11) of
            gi-14318434 from base 400001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.1
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1 / +1

                                      
Query: 574  VDYIYIRCCYSSTLC*FSS*LAPFFE 651
            +DY Y  C Y S +C FS+ +A + E
Sbjct: 9376 LDYYYDYCIYLSRICHFSTGIACYCE 9453


>GI-14318434_04 gi-14318434_04.seq Continuation (4 of 11) of gi-14318434
              from base 300001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.1
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1 / +2

                                        
Query: 574    VDYIYIRCCYSSTLC*FSS*LAPFFE 651
              +DY Y  C Y S +C FS+ +A + E
Sbjct: 109376 LDYYYDYCIYLSRICHFSTGIACYCE 109453


>GI-14318434_01 gi-14318434_01.seq Continuation (1 of 11) of
            gi-14318434 from base 1
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.1
 Identities = 11/28 (39%), Positives = 16/28 (56%)
 Frame = +2 / -1

                                        
Query: 545  SNCKQKEQWGLIIFIYVVATPLPFVNLV 628
            SNC+     G+ I I    TP+PF+ +V
Sbjct: 8723 SNCRYTVCGGVPISILTTYTPIPFITVV 8640


>GI-14270686_1 gi-14270686_1.seq Continuation (1 of 9) of gi-14270686
            from base 1
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.1
 Identities = 12/37 (32%), Positives = 19/37 (50%)
 Frame = -2 / -1

                                                 
Query: 558  CLQLLSIYTPGAQFRKSNSYLLPLSSVLRYKQNSHNF 448
            CL++   Y P   F +  S+LL     LRY++   +F
Sbjct: 8744 CLKMTFKYVPSLPFERKKSHLLLQRG*LRYRRALTHF 8634


>GI-7839148_06 gi-7839148_06.seq Continuation (6 of 16) of gi-7839148
             from base 500001
          Length = 110000

 Score = 25.8 bits (50), Expect(3) = 6.8
 Identities = 10/28 (35%), Positives = 15/28 (52%)
 Frame = +1 / +3

                                         
Query: 709   LTHTDTCNLSLLCTHFTYGYSYLSLILY 792
             L  T+ C L  L +H TY +S   ++ Y
Sbjct: 48321 LRFTNECELFCLYSHITYAFSRKKILGY 48404


 Score = 18.9 bits (35), Expect(3) = 6.8
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = +1 / +1

                        
Query: 784   ILYNHLCHLVL 816
             ILY   CH+++
Sbjct: 48451 ILYRSSCHVII 48483


 Score = 17.6 bits (32), Expect(3) = 6.8
 Identities = 5/7 (71%), Positives = 6/7 (85%)
 Frame = +2 / +2

                    
Query: 626   VRSWHRF 646
             V S+HRF
Sbjct: 48170 VSSYHRF 48190


>GI-7839148_12 gi-7839148_12.seq Continuation (12 of 16) of gi-7839148
             from base 1100001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.4
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +1 / -1

                             
Query: 700   FPNLTHTDTCNLSLLC 747
             F NL H DTCN  L C
Sbjct: 98738 FSNLLHCDTCNNILSC 98691


>GI-7839148_10 gi-7839148_10.seq Continuation (10 of 16) of gi-7839148
             from base 900001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.4
 Identities = 16/48 (33%), Positives = 21/48 (43%)
 Frame = -2 / -2

                                                             
Query: 618   TKGRGVATTYINIINPHCSFCLQLLSIYTPGAQFRKSNSYLLPLSSVL 475
             T  R V   Y+NI+N     CL  L         +KS+   LP  S+L
Sbjct: 54700 TNFRPVRV*YMNIVN*SVHSCLNPLLFQFVNGSLKKSSPLKLPSFSLL 54557


>GI-7839148_03 gi-7839148_03.seq Continuation (3 of 16) of gi-7839148
             from base 200001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.4
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1 / +3

                                    
Query: 694   NFFPNLTHTDTCNLSLLCTHFTY 762
             N FPNL+H  T   +++ TH  +
Sbjct: 37974 NHFPNLSHLLTTTTNIIVTHLIH 38042


>GI-7276232_5 gi-7276232_5.seq Continuation (5 of 6) of gi-7276232 from
             base 400001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.4
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -3 / +1

                                      
Query: 899   QQKIKDKNNEEYQKVTQLRPTKELK 825
             ++KIK +  EE   VTQ+  T E K
Sbjct: 32344 EKKIKSRKEEEKNNVTQVNTTTEKK 32418


>GI-6324971_07 gi-6324971_07.seq Continuation (7 of 10) of gi-6324971
             from base 600001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.4
 Identities = 9/17 (52%), Positives = 14/17 (81%)
 Frame = +3 / -3

                              
Query: 789   LQPSLPPSFVLYF*FFC 839
             LQP++ PSF++YF + C
Sbjct: 73230 LQPTIMPSFLVYFFYPC 73180


>GI-6323989_5 gi-6323989_5.seq Continuation (5 of 8) of gi-6323989 from
             base 400001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.4
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +1 / +2

                             
Query: 310   ECSCNQRTCN*SIKSK 357
             ECS N R CN  +KSK
Sbjct: 23903 ECSVNPRFCNVQVKSK 23950


>GI-6323989_4 gi-6323989_4.seq Continuation (4 of 8) of gi-6323989 from
             base 300001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.4
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +3 / +3

                                      
Query: 777   VSDTLQPSLPPSFVLYF*FFCWSQL 851
             +S  L   +PP+ +L F +  W Q+
Sbjct: 16302 ISSPLTKGIPPNILLAFSYTAW*QV 16376


>GI-6323989_1 gi-6323989_1.seq Continuation (1 of 8) of gi-6323989 from
             base 1
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.4
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3 / -3

                                         
Query: 726   LQLKSSVYAFYLWLFIFVSDTLQPSLPP 809
             LQLK + +A +L  F F    + P  PP
Sbjct: 68931 LQLKETYFALFLLCFSFTVRFITPKKPP 68848


>GI-6322016_4 gi-6322016_4.seq Continuation (4 of 5) of gi-6322016 from
             base 300001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.4
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +1 / +2

                                                  
Query: 721   DTCNLSLLCTHFTYGYSYLSLILYNHLCHLVLCYIFN 831
             D C  +   T F+     + LIL +  CH++L    N
Sbjct: 17876 DCCQKNRFTTWFSKDPRLIFLILVSSFCHIILSIFLN 17986


  Database: /home/pmiguel/yeast/yeast
    Posted date:  Oct 27, 2001  2:26 PM
  Number of letters in database: 13,206,306
  Number of sequences in database:  122
  
Lambda     K      H
   0.318    0.135    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 24086587
Number of Sequences: 122
Number of extensions: 337736
Number of successful extensions: 20797
Number of sequences better than 10.0: 27
length of query: 305
length of database: 4,402,102
effective HSP length: 44
effective length of query: 260
effective length of database: 4,396,734
effective search space: 1143150840
effective search space used: 1143150840
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 53 (27.2 bits)