TBLASTX 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCPvsSce/blast/0941_F03_K05ZS5.seq
         (900 letters)

Database: /home/pmiguel/yeast/yeast
           122 sequences; 13,206,306 total letters

Searching............................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

GI-6323501_01 gi-6323501_01.seq Continuation (1 of 10) of gi-632...    30  0.89
GI-14277709_4 gi-14277709_4.seq Continuation (4 of 7) of gi-1427...    30  0.89
GI-14270686_3 gi-14270686_3.seq Continuation (3 of 9) of gi-1427...    30  1.2
GI-14270686_1 gi-14270686_1.seq Continuation (1 of 9) of gi-1427...    29  1.7
GI-14389432_02 gi-14389432_02.seq Continuation (2 of 11) of gi-1...    29  2.3
GI-14270686_5 gi-14270686_5.seq Continuation (5 of 9) of gi-1427...    29  3.2
GI-14389432_03 gi-14389432_03.seq Continuation (3 of 11) of gi-1...    28  4.3
GI-14318434_05 gi-14318434_05.seq Continuation (5 of 11) of gi-1...    28  4.3
GI-14389432_11 gi-14389432_11.seq Continuation (11 of 11) of gi-...    28  6.0
GI-6323501_07 gi-6323501_07.seq Continuation (7 of 10) of gi-632...    28  6.0
GI-14627172_2 gi-14627172_2.seq Continuation (2 of 8) of gi-1462...    28  6.0
GI-14389432_10 gi-14389432_10.seq Continuation (10 of 11) of gi-...    28  6.0
GI-14270686_8 gi-14270686_8.seq Continuation (8 of 9) of gi-1427...    28  6.0
GI-7839148_15 gi-7839148_15.seq Continuation (15 of 16) of gi-78...    27  8.2
GI-7839148_09 gi-7839148_09.seq Continuation (9 of 16) of gi-783...    27  8.2
GI-7276232_2 gi-7276232_2.seq Continuation (2 of 6) of gi-727623...    27  8.2
GI-6324971_03 gi-6324971_03.seq Continuation (3 of 10) of gi-632...    27  8.2
GI-14270686_4 gi-14270686_4.seq Continuation (4 of 9) of gi-1427...    27  8.2
GI-7839148_13 gi-7839148_13.seq Continuation (13 of 16) of gi-78...    27  9.0

>GI-6323501_01 gi-6323501_01.seq Continuation (1 of 10) of gi-6323501
             from base 1
          Length = 110000

 Score = 30.4 bits (60), Expect = 0.89
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1 / -1

                             
Query: 51    KWGVWXXYPLLQCRAS 4
             KW +W  YP+L CR S
Sbjct: 43709 KWCIWECYPMLLCRKS 43662


 Score = 28.1 bits (55), Expect = 4.3
 Identities = 12/46 (26%), Positives = 22/46 (47%)
 Frame = +3 / +2

                                                           
Query: 570   LSRYAWRRTSNRKTTLWRPSCRQDQSRCSWGRLQPGITKNGWTQKT 707
             L+R +    S+R  T W    R ++  C W  +   +T +  +Q+T
Sbjct: 24326 LTRCSRNTMSSRSVTSWETLTRNNKGGCVWTEVLEELTNDVKSQQT 24463


>GI-14277709_4 gi-14277709_4.seq Continuation (4 of 7) of gi-14277709
             from base 300001
          Length = 110000

 Score = 30.4 bits (60), Expect = 0.89
 Identities = 8/22 (36%), Positives = 11/22 (49%)
 Frame = -3 / +3

                                   
Query: 133   SLACLLDCCSRLSSQCQCVCXW 68
             S  C  +CC   +  C C+C W
Sbjct: 80571 SCCCCCNCCCCCNCSCCCICCW 80636


>GI-14270686_3 gi-14270686_3.seq Continuation (3 of 9) of gi-14270686
             from base 200001
          Length = 110000

 Score = 29.9 bits (59), Expect = 1.2
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +3 / -3

                                         
Query: 255   PARSPALKKRCRSFDVEIRGFRHLEEMV 338
             PARS    K+ +++D+E+  F+ L E V
Sbjct: 67893 PARSYTALKKVKNYDIELENFKVLNEYV 67810


>GI-14270686_1 gi-14270686_1.seq Continuation (1 of 9) of gi-14270686
             from base 1
          Length = 110000

 Score = 29.5 bits (58), Expect = 1.7
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +3 / +3

                                           
Query: 183   PVS*RPPMPAKRPLEGGGGGDSPSPARSPA 272
             PVS  PP+  +  ++ G   DSP+P  +PA
Sbjct: 84519 PVSSPPPVAPELGMDPGNPPDSPAPGPAPA 84608


>GI-14389432_02 gi-14389432_02.seq Continuation (2 of 11) of gi-14389432
             from base 100001
          Length = 110000

 Score = 29.0 bits (57), Expect = 2.3
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -3 / -2

                                              
Query: 370   TAASTLCTQLVTISSRCLNPLISTSKERHLFFS 272
             T  + LC  ++ IS  CLN   + S   +LFFS
Sbjct: 28786 TCGTCLCLLILLISGICLNLSFNFSSYSNLFFS 28688


 Score = 28.1 bits (55), Expect = 4.3
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +1 / +2

                                   
Query: 580    MPGGEPPTGRPLFGALLAGKI 642
              +PGG+  TGRPL+  LL  KI
Sbjct: 107180 IPGGKLITGRPLYQRLLRVKI 107242


>GI-14270686_5 gi-14270686_5.seq Continuation (5 of 9) of gi-14270686
             from base 400001
          Length = 110000

 Score = 28.6 bits (56), Expect = 3.2
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -2 / +1

                                   
Query: 746   QTYNREPSHTSQLSLLCPPIFC 681
             +TYN+  S  SQL L CPP  C
Sbjct: 31606 RTYNKVGSRFSQLLLGCPPS*C 31671


>GI-14389432_03 gi-14389432_03.seq Continuation (3 of 11) of
            gi-14389432 from base 200001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.3
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +1 / +1

                                 
Query: 580  MPGGEPPTGRPLFGALLAGKI 642
            +PGG+  TGRPL+  LL  KI
Sbjct: 7180 IPGGKLITGRPLYQRLLRVKI 7242


>GI-14318434_05 gi-14318434_05.seq Continuation (5 of 11) of gi-14318434
             from base 400001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.3
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +3 / -1

                                
Query: 591   RTSNRKTTLWRPSCRQDQS 647
             R+SNRK+ L++P CR + S
Sbjct: 74387 RSSNRKSNLFKPFCRVNTS 74331


>GI-14389432_11 gi-14389432_11.seq Continuation (11 of 11) of
            gi-14389432 from base 1000001
          Length = 78173

 Score = 27.6 bits (54), Expect = 6.0
 Identities = 5/14 (35%), Positives = 9/14 (63%)
 Frame = -3 / -2

                          
Query: 91   QCQCVCXWCGGEWE 50
            +C+C+  WC   W+
Sbjct: 4540 ECRCLTSWCSSSWD 4499


>GI-6323501_07 gi-6323501_07.seq Continuation (7 of 10) of gi-6323501
             from base 600001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.0
 Identities = 11/32 (34%), Positives = 13/32 (40%)
 Frame = +2 / +1

                                             
Query: 617   LAPFLPARSKSLFLGATSTWNNKKWVDTEDLI 712
             +  +LP  S S   G  S W    W  T  LI
Sbjct: 57490 MVKYLPGESDSGMFGGNSNWRGPIWFPTSFLI 57585


 Score = 27.2 bits (53), Expect = 8.2
 Identities = 15/51 (29%), Positives = 20/51 (38%)
 Frame = +3 / -3

                                                                
Query: 510   LNGLSNEILPRRESAXXMGILSRYAWRRTSNRKTTLWRPSCRQDQSRCSWG 662
             L G   E++  R S+     +S    R +      LW  S   D  R SWG
Sbjct: 47505 LGGNGGEVILFRASSTLDSSVSNCWLRSSDGSMVLLWDSSLNFDCIRASWG 47353


>GI-14627172_2 gi-14627172_2.seq Continuation (2 of 8) of gi-14627172
             from base 100001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.0
 Identities = 12/30 (40%), Positives = 12/30 (40%)
 Frame = -3 / -2

                                           
Query: 118   LDCCSRLSSQCQCVCXWCGGEWEVGSMXXV 29
             LDC  RL   C C C    GE     M  V
Sbjct: 42835 LDCTIRLLQSCLCFCPAAHGEISEAKMGTV 42746


>GI-14389432_10 gi-14389432_10.seq Continuation (10 of 11) of gi-14389432
              from base 900001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.0
 Identities = 5/14 (35%), Positives = 9/14 (63%)
 Frame = -3 / -1

                            
Query: 91     QCQCVCXWCGGEWE 50
              +C+C+  WC   W+
Sbjct: 104540 ECRCLTSWCSSSWD 104499


>GI-14270686_8 gi-14270686_8.seq Continuation (8 of 9) of gi-14270686
             from base 700001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.0
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -3 / -1

                              
Query: 124   CLLDCCSRLSSQCQCVC 74
             C   CC RL S C C C
Sbjct: 79820 CCCCCCRRLLSNCWCRC 79770


>GI-7839148_15 gi-7839148_15.seq Continuation (15 of 16) of gi-7839148
             from base 1400001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.2
 Identities = 11/28 (39%), Positives = 14/28 (49%)
 Frame = -3 / -1

                                         
Query: 94    SQCQCVCXWCGGEWEVGSMXXVPTTTVQ 11
             S C C C  CG  + VG +   P  T+Q
Sbjct: 78128 SSCPCCCACCGQCFTVGIL*RNPYPTLQ 78045


>GI-7839148_09 gi-7839148_09.seq Continuation (9 of 16) of gi-7839148
             from base 800001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.2
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = -3 / -1

                               
Query: 118   LDCCSRLSSQCQCVCXWC 65
             L CCS  SS C C C  C
Sbjct: 90806 LGCCSC*SSTCCCCCKKC 90753


>GI-7276232_2 gi-7276232_2.seq Continuation (2 of 6) of gi-7276232 from
             base 100001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.2
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +1 / -1

                             
Query: 31    RXPYSPLPTPHRTXST 78
             R PY P+ T HRT ST
Sbjct: 93302 RFPYVPVATEHRTRST 93255


>GI-6324971_03 gi-6324971_03.seq Continuation (3 of 10) of gi-6324971
             from base 200001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.2
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = -2 / +2

                                             
Query: 716   SQLSLLCPPIFCYSRLKSPPRTTTLILPARRA 621
             S L+LLCP +   S   SP   T  I    RA
Sbjct: 90053 SSLTLLCPWLIFNSASASPKAITARISQTLRA 90148


>GI-14270686_4 gi-14270686_4.seq Continuation (4 of 9) of gi-14270686
             from base 300001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.2
 Identities = 11/30 (36%), Positives = 15/30 (49%)
 Frame = -1 / -2

                                           
Query: 606   SCWRFSSRHILRGSPXXVQIPFLVKFHYSS 517
             +CW  +S  +    P  VQ+  L K H SS
Sbjct: 48094 NCWEIASNSLSYSFPSIVQMVSLEKIHGSS 48005


>GI-7839148_13 gi-7839148_13.seq Continuation (13 of 16) of gi-7839148
             from base 1200001
          Length = 110000

 Score = 26.7 bits (52), Expect(2) = 9.0
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = -3 / -3

                          
Query: 331   SSRCLNPLISTSK 293
             SS+C+NPL+S SK
Sbjct: 22998 SSKCMNPLLSLSK 22960


 Score = 17.6 bits (32), Expect(2) = 9.0
 Identities = 5/10 (50%), Positives = 6/10 (60%)
 Frame = -2 / -2

                       
Query: 437   VACNCFSHHF 408
             + CN   HHF
Sbjct: 23164 IKCNHRPHHF 23135


  Database: /home/pmiguel/yeast/yeast
    Posted date:  Oct 27, 2001  2:26 PM
  Number of letters in database: 13,206,306
  Number of sequences in database:  122
  
Lambda     K      H
   0.318    0.135    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 22593919
Number of Sequences: 122
Number of extensions: 295515
Number of successful extensions: 18831
Number of sequences better than 10.0: 19
length of query: 300
length of database: 4,402,102
effective HSP length: 44
effective length of query: 255
effective length of database: 4,396,734
effective search space: 1121167170
effective search space used: 1121167170
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 53 (27.2 bits)