TBLASTX 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCPvsSce/blast/0941_F06_K11ZS5.seq
         (916 letters)

Database: /home/pmiguel/yeast/yeast
           122 sequences; 13,206,306 total letters

Searching............................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

GI-10383748 gi|10383748|ref|NC_001135.2| Saccharomyces cerevisia...    33  0.18
GI-14318439_06 gi-14318439_06.seq Continuation (6 of 11) of gi-1...    32  0.35
GI-7839148_11 gi-7839148_11.seq Continuation (11 of 16) of gi-78...    31  0.48
GI-14627172_3 gi-14627172_3.seq Continuation (3 of 8) of gi-1462...    31  0.48
GI-14318439_05 gi-14318439_05.seq Continuation (5 of 11) of gi-1...    30  0.77
GI-6323989_1 gi-6323989_1.seq Continuation (1 of 8) of gi-632398...    30  1.2
GI-14627172_7 gi-14627172_7.seq Continuation (7 of 8) of gi-1462...    29  1.7
GI-14627172_6 gi-14627172_6.seq Continuation (6 of 8) of gi-1462...    29  1.7
GI-14389432_05 gi-14389432_05.seq Continuation (5 of 11) of gi-1...    29  1.7
GI-14270686_7 gi-14270686_7.seq Continuation (7 of 9) of gi-1427...    29  1.7
GI-7839148_15 gi-7839148_15.seq Continuation (15 of 16) of gi-78...    23  4.1
GI-6862570_2 gi-6862570_2.seq Continuation (2 of 6) of gi-686257...    28  4.4
GI-6323501_06 gi-6323501_06.seq Continuation (6 of 10) of gi-632...    28  4.4
GI-6323501_05 gi-6323501_05.seq Continuation (5 of 10) of gi-632...    28  4.4
GI-6323501_03 gi-6323501_03.seq Continuation (3 of 10) of gi-632...    28  4.4
GI-7839148_06 gi-7839148_06.seq Continuation (6 of 16) of gi-783...    28  6.1
GI-7276232_1 gi-7276232_1.seq Continuation (1 of 6) of gi-727623...    28  6.1
GI-14318450 gi|14318450|ref|NC_001138.2| Saccharomyces cerevisia...    26  7.8
GI-6862570_6 gi-6862570_6.seq Continuation (6 of 6) of gi-686257...    27  8.4
GI-7276232_5 gi-7276232_5.seq Continuation (5 of 6) of gi-727623...    27  8.4
GI-6862570_1 gi-6862570_1.seq Continuation (1 of 6) of gi-686257...    27  8.4
GI-6322016_2 gi-6322016_2.seq Continuation (2 of 5) of gi-632201...    27  8.4
GI-14389432_08 gi-14389432_08.seq Continuation (8 of 11) of gi-1...    27  8.4
GI-14389432_01 gi-14389432_01.seq Continuation (1 of 11) of gi-1...    27  8.4
GI-14627172_4 gi-14627172_4.seq Continuation (4 of 8) of gi-1462...    26  9.1
GI-14389432_09 gi-14389432_09.seq Continuation (9 of 11) of gi-1...    25  9.1
GI-14389432_06 gi-14389432_06.seq Continuation (6 of 11) of gi-1...    22  9.1

>GI-10383748 gi|10383748|ref|NC_001135.2| Saccharomyces cerevisiae
              chromosome III, complete c
          Length = 316613

 Score = 32.7 bits (65), Expect = 0.18
 Identities = 17/39 (43%), Positives = 20/39 (50%)
 Frame = +3 / +1

                                                     
Query: 615    PRGLRTKTLVLCCSFALSRVCLRRARLLPVFSRPWSRVL 731
              PRG R  TL L CS     VC RR  L   FSR  ++ +
Sbjct: 209929 PRGRRHPTLYL*CSSVCFFVCSRRGGLASRFSRSAAKTM 210045


>GI-14318439_06 gi-14318439_06.seq Continuation (6 of 11) of gi-14318439
             from base 500001
          Length = 110000

 Score = 31.8 bits (63), Expect = 0.35
 Identities = 13/21 (61%), Positives = 16/21 (75%)
 Frame = +3 / -3

                                  
Query: 312   CSSTGTLSMGSLPPHLILSPS 374
             CS  GTLS+GSL P L+L P+
Sbjct: 79722 CSPLGTLSVGSLMPVLLLFPT 79660


>GI-7839148_11 gi-7839148_11.seq Continuation (11 of 16) of gi-7839148
             from base 1000001
          Length = 110000

 Score = 31.3 bits (62), Expect = 0.48
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +2 / +2

                               
Query: 599   IVPWFPPWPAYENSCPLL 652
             ++P++P W AY+N  PLL
Sbjct: 24083 VLPYYPNWKAYQNLVPLL 24136


>GI-14627172_3 gi-14627172_3.seq Continuation (3 of 8) of gi-14627172
             from base 200001
          Length = 110000

 Score = 31.3 bits (62), Expect = 0.48
 Identities = 12/22 (54%), Positives = 13/22 (58%)
 Frame = +1 / +2

                                   
Query: 814   FARCCARVLFVLXGHWWARRSW 879
             FA CC  VLF L GH    +SW
Sbjct: 45335 FAFCCWLVLFALLGHLLVPKSW 45400


 Score = 24.4 bits (47), Expect(2) = 5.3
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1 / -3

                                       
Query: 616   PVACVRKLLSFVARLLCPGCVFDVLA 693
             PV C+ +  ++ A LLC    F  LA
Sbjct: 35211 PVRCISEFCTYNASLLCRCACF*RLA 35134


 Score = 20.8 bits (39), Expect(2) = 5.3
 Identities = 7/16 (43%), Positives = 9/16 (55%)
 Frame = +1 / -3

                             
Query: 784   LWCLCRVGASFARCCA 831
             +WC  R  +   RCCA
Sbjct: 35103 IWCGGRPYSEGKRCCA 35056


>GI-14318439_05 gi-14318439_05.seq Continuation (5 of 11) of gi-14318439
             from base 400001
          Length = 110000

 Score = 30.4 bits (60), Expect(2) = 0.77
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = +1 / -3

                        
Query: 859   WWARRSWCSKA 891
             WW RR WCSKA
Sbjct: 79725 WW*RRRWCSKA 79693


 Score = 18.0 bits (33), Expect(2) = 0.77
 Identities = 5/11 (45%), Positives = 7/11 (63%)
 Frame = +2 / -1

                        
Query: 761   SVWRFFRACGV 793
             S+W + R C V
Sbjct: 79856 SLWSYTRPCAV 79824


>GI-6323989_1 gi-6323989_1.seq Continuation (1 of 8) of gi-6323989 from
             base 1
          Length = 110000

 Score = 29.9 bits (59), Expect = 1.2
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +3 / +2

                                        
Query: 447   HQLDLDAGRGDAQPWASSTSASAFVAW 527
             H   LDAG   + P +SSTS S  + W
Sbjct: 26978 HSATLDAGTTISLPTSSSTSLSTIITW 27058


 Score = 29.0 bits (57), Expect = 2.3
 Identities = 11/32 (34%), Positives = 16/32 (49%)
 Frame = -2 / -2

                                             
Query: 672   PGTEQTSNKGQEFSYAGHGGNQGTMGCKQVPN 577
             P  E  S +G+ F+   H  N   +GC Q+ N
Sbjct: 86545 PFREDLSCRGKVFNLIPHHINTSVIGCIQLQN 86450


 Score = 27.2 bits (53), Expect = 8.4
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1 / -3

                                 
Query: 766   VALLPRLWCLCRVGASFARC 825
             + LLPR+ C C + A +A+C
Sbjct: 85545 MGLLPRMKC*CLLAAIYAKC 85486


>GI-14627172_7 gi-14627172_7.seq Continuation (7 of 8) of gi-14627172
            from base 600001
          Length = 110000

 Score = 29.5 bits (58), Expect = 1.7
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1 / +2

                       
Query: 856  HWWARRSWCSK 888
            HWW+ R WCS+
Sbjct: 3032 HWWSGRVWCSR 3064


>GI-14627172_6 gi-14627172_6.seq Continuation (6 of 8) of gi-14627172 from
              base 500001
          Length = 110000

 Score = 29.5 bits (58), Expect = 1.7
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1 / +3

                         
Query: 856    HWWARRSWCSK 888
              HWW+ R WCS+
Sbjct: 103032 HWWSGRVWCSR 103064


>GI-14389432_05 gi-14389432_05.seq Continuation (5 of 11) of gi-14389432
             from base 400001
          Length = 110000

 Score = 29.5 bits (58), Expect = 1.7
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +3 / +3

                                           
Query: 351   PHLILSPSHERCSFTATLTPSRSSCTPARL 440
             P L L+P+  + S  +TLT SRS   P+++
Sbjct: 11604 PVLSLTPTRPKISLNSTLTTSRSETPPSQV 11693


>GI-14270686_7 gi-14270686_7.seq Continuation (7 of 9) of gi-14270686
             from base 600001
          Length = 110000

 Score = 29.5 bits (58), Expect = 1.7
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = -3 / +2

                                
Query: 914   LFLFCHFCAFEHHDRRAHQ 858
             L+ + + C+  HH R  H+
Sbjct: 82856 LYFYPYLCSHRHHSRHRHR 82912


>GI-7839148_15 gi-7839148_15.seq Continuation (15 of 16) of gi-7839148
             from base 1400001
          Length = 110000

 Score = 23.1 bits (44), Expect(2) = 4.1
 Identities = 8/32 (25%), Positives = 14/32 (43%)
 Frame = -3 / +2

                                             
Query: 878   HDRRAHQWPNRTNNTRAQQRANDAPTRQRHHR 783
             + R+   W       +   R  ++P R+RHH 
Sbjct: 53573 NQRQLETWQPI*QRKQRNDRPWNSPYRRRHHH 53668


 Score = 22.6 bits (43), Expect(2) = 4.1
 Identities = 11/27 (40%), Positives = 13/27 (47%)
 Frame = -3 / +2

                                        
Query: 800   RQRHHRRGRSATPKPSQPRHGEQENPR 720
             R RHHR+ R  +   S  RH E    R
Sbjct: 53672 RMRHHRKRRQ*SFYRSNQRHLEDHR*R 53752


>GI-6862570_2 gi-6862570_2.seq Continuation (2 of 6) of gi-6862570 from
             base 100001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.4
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -3 / -3

                                        
Query: 605   GRWGVNRSLITISQNYPCLEHSANPRP 525
             G+WG+NR +    +  PCL+   + RP
Sbjct: 80490 GKWGINRLISCGDKVGPCLDILRSERP 80410


>GI-6323501_06 gi-6323501_06.seq Continuation (6 of 10) of
           gi-6323501 from base 500001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.4
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +3 / +2

                                                    
Query: 327 TLSMGSLPPHLILSPSHERCSFTATLTPSRSSCTPARLQHH 449
           TL++ SLP  ++++ S    SF  TLT    S  P ++  H
Sbjct: 149 TLTILSLPAEMMVTESSSAFSFGTTLTWETQSL*PNKVAKH 271


>GI-6323501_05 gi-6323501_05.seq Continuation (5 of 10) of gi-6323501 from
              base 400001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.4
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +3 / +3

                                                       
Query: 327    TLSMGSLPPHLILSPSHERCSFTATLTPSRSSCTPARLQHH 449
              TL++ SLP  ++++ S    SF  TLT    S  P ++  H
Sbjct: 100149 TLTILSLPAEMMVTESSSAFSFGTTLTWETQSL*PNKVAKH 100271


>GI-6323501_03 gi-6323501_03.seq Continuation (3 of 10) of gi-6323501
             from base 200001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.4
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +3 / +2

                                
Query: 693   LLPVFSRPWSRVLLFSVTW 749
             LL V+S PW+++ L ++ W
Sbjct: 17795 LLNVYSIPWNQICLLALHW 17851


>GI-7839148_06 gi-7839148_06.seq Continuation (6 of 16) of gi-7839148
             from base 500001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.1
 Identities = 8/9 (88%), Positives = 9/9 (99%)
 Frame = +3 / +1

                      
Query: 36    SNPPLPPLW 62
             +NPPLPPLW
Sbjct: 80413 TNPPLPPLW 80439


>GI-7276232_1 gi-7276232_1.seq Continuation (1 of 6) of gi-7276232 from
             base 1
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.1
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1 / +3

                                    
Query: 778   PRLWCLCRVGASFARCCARVLFV 846
             PRLWC+C    S  R     L++
Sbjct: 33357 PRLWCVCEASTS*KRVVTGSLYI 33425


>GI-14318450 gi|14318450|ref|NC_001138.2| Saccharomyces cerevisiae
              chromosome VI, complete ch
          Length = 270148

 Score = 25.8 bits (50), Expect(2) = 7.8
 Identities = 8/32 (25%), Positives = 16/32 (50%)
 Frame = +3 / -3

                                              
Query: 648    CCSFALSRVCLRRARLLPVFSRPWSRVLLFSV 743
              CC       C+ +  +  + S+PW  +L+ S+
Sbjct: 160586 CCCCCCCCCCIDKTLIWSLISKPWLELLVESI 160491


 Score = 18.5 bits (34), Expect(2) = 7.8
 Identities = 5/5 (100%), Positives = 5/5 (100%)
 Frame = +2 / -1

                   
Query: 509    ICLCS 523
              ICLCS
Sbjct: 160714 ICLCS 160700


>GI-6862570_6 gi-6862570_6.seq Continuation (6 of 6) of gi-6862570 from
             base 500001
          Length = 62639

 Score = 27.2 bits (53), Expect = 8.4
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = +3 / +2

                                                               
Query: 192   SELHYLRCSLSPDQIFLLRSGTSPAWLRRCSGDSDPTRRRCSSTGTLSMG 341
             S+L  ++  L    ++  RS +    L  CS  +DP++R  +S+   S G
Sbjct: 10163 SQLPSIKEHLKKKPLYTHRSSSQLDQLNSCSSVTDPSKRSSNSSSGSSNG 10312


>GI-7276232_5 gi-7276232_5.seq Continuation (5 of 6) of gi-7276232 from
             base 400001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.4
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -1 / -3

                                      
Query: 295   SESPEQRRSHAGEVPERKRKIWSGE 221
             SESP+  RS++ ++    RKIWS +
Sbjct: 89790 SESPKAIRSNSKKISRFFRKIWSSK 89716


>GI-6862570_1 gi-6862570_1.seq Continuation (1 of 6) of gi-6862570 from
             base 1
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.4
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1 / -3

                                 
Query: 574   VIRDLFTPHRPLVSPVACVR 633
             VI  L TPH P+VS + C++
Sbjct: 20685 VIFTLVTPHHPIVSILCCLQ 20626


>GI-6322016_2 gi-6322016_2.seq Continuation (2 of 5) of gi-6322016 from
             base 100001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.4
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -3 / +3

                                 
Query: 461   QVELVMLQPCRRAAAP*WRQ 402
             ++E   +QPC+R A  *W++
Sbjct: 76509 KIEFSRIQPCKRTAVG*WKR 76568


>GI-14389432_08 gi-14389432_08.seq Continuation (8 of 11) of gi-14389432
             from base 700001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.4
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -3 / +3

                                            
Query: 512   RCRRRACPWLGVSSPCIQVELVMLQPCRRAA 420
             R  RR CP+ G   P  +++L  +  CR  A
Sbjct: 63906 RSERR*CPYRGRVPPLHRIQLPQISRCRHFA 63998


>GI-14389432_01 gi-14389432_01.seq Continuation (1 of 11) of gi-14389432
             from base 1
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.4
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1 / -2

                                    
Query: 595   PHRPLVSPVACVRKLLSFVARLL 663
             P RP  S  AC R+ + F+  +L
Sbjct: 50371 PSRPECSITACTRRTVIFMVYIL 50303


>GI-14627172_4 gi-14627172_4.seq Continuation (4 of 8) of gi-14627172
             from base 300001
          Length = 110000

 Score = 25.8 bits (50), Expect(2) = 9.1
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +2 / -2

                                           
Query: 596   PIVPWFPPWPAYENSCPLLLVCSVPGVSST 685
             P VP  PP P   ++ P L   S+P V  T
Sbjct: 99934 PSVPPVPPVPPVSSAPPALSAPSIPPVPPT 99845


 Score = 18.5 bits (34), Expect(2) = 9.1
 Identities = 5/6 (83%), Positives = 5/6 (83%)
 Frame = +2 / -1

                   
Query: 686   CSPLTC 703
             CSP TC
Sbjct: 99767 CSPSTC 99750


>GI-14389432_09 gi-14389432_09.seq Continuation (9 of 11) of gi-14389432
             from base 800001
          Length = 110000

 Score = 25.3 bits (49), Expect(2) = 9.1
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +3 / +2

                                                  
Query: 384   CSFTATLTPSRSSCTPARLQHHQLDLDAGRGDAQPWA 494
             CSF+++L P +S      LQH Q  L A +     W+
Sbjct: 27431 CSFSSSLPPKQSRFAF*YLQHLQNSLQAPQWHH*TWS 27541


 Score = 18.9 bits (35), Expect(2) = 9.1
 Identities = 5/12 (41%), Positives = 8/12 (66%)
 Frame = +3 / +1

                         
Query: 585   PVYTPSSPGFPR 620
             P Y P++P F +
Sbjct: 27664 PEYNPTTPSFAK 27699


>GI-14389432_06 gi-14389432_06.seq Continuation (6 of 11) of gi-14389432
             from base 500001
          Length = 110000

 Score = 22.1 bits (42), Expect(2) = 9.1
 Identities = 11/27 (40%), Positives = 13/27 (47%)
 Frame = -3 / -3

                                        
Query: 800   RQRHHRRGRSATPKPSQPRHGEQENPR 720
             R RHHR+ R  +   S  RH E    R
Sbjct: 16053 RMRHHRKRRR*SFYRSNQRHLEDHR*R 15973


 Score = 22.1 bits (42), Expect(2) = 9.1
 Identities = 8/32 (25%), Positives = 14/32 (43%)
 Frame = -3 / -3

                                             
Query: 878   HDRRAHQWPNRTNNTRAQQRANDAPTRQRHHR 783
             + R+   W     + R   +   +P R+RHH 
Sbjct: 16152 NQRQLGTWQPI*RHKRQNDQP*SSPYRRRHHH 16057


  Database: /home/pmiguel/yeast/yeast
    Posted date:  Oct 27, 2001  2:26 PM
  Number of letters in database: 13,206,306
  Number of sequences in database:  122
  
Lambda     K      H
   0.318    0.135    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 23207112
Number of Sequences: 122
Number of extensions: 330198
Number of successful extensions: 21307
Number of sequences better than 10.0: 27
length of query: 305
length of database: 4,402,102
effective HSP length: 44
effective length of query: 260
effective length of database: 4,396,734
effective search space: 1143150840
effective search space used: 1143150840
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 53 (27.2 bits)