TBLASTX 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCPvsSce/blast/0941_F07_K13ZS5.seq
         (942 letters)

Database: /home/pmiguel/yeast/yeast
           122 sequences; 13,206,306 total letters

Searching............................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

GI-6862570_6 gi-6862570_6.seq Continuation (6 of 6) of gi-686257...    31  0.27
GI-6324971_06 gi-6324971_06.seq Continuation (6 of 10) of gi-632...    30  0.94
GI-6324971_08 gi-6324971_08.seq Continuation (8 of 10) of gi-632...    27  1.4
GI-7839148_15 gi-7839148_15.seq Continuation (15 of 16) of gi-78...    29  1.8
GI-6322016_3 gi-6322016_3.seq Continuation (3 of 5) of gi-632201...    29  2.4
GI-14318450 gi|14318450|ref|NC_001138.2| Saccharomyces cerevisia...    29  3.3
GI-6323501_04 gi-6323501_04.seq Continuation (4 of 10) of gi-632...    29  3.3
GI-14318434_01 gi-14318434_01.seq Continuation (1 of 11) of gi-1...    29  3.3
GI-10383748 gi|10383748|ref|NC_001135.2| Saccharomyces cerevisia...    28  3.6
GI-14318434_07 gi-14318434_07.seq Continuation (7 of 11) of gi-1...    27  4.2
GI-14318434_06 gi-14318434_06.seq Continuation (6 of 11) of gi-1...    27  4.2
GI-7839148_11 gi-7839148_11.seq Continuation (11 of 16) of gi-78...    28  4.6
GI-7839148_06 gi-7839148_06.seq Continuation (6 of 16) of gi-783...    28  4.6
GI-6862570_2 gi-6862570_2.seq Continuation (2 of 6) of gi-686257...    28  4.6
GI-6323501_07 gi-6323501_07.seq Continuation (7 of 10) of gi-632...    28  4.6
GI-14277709_4 gi-14277709_4.seq Continuation (4 of 7) of gi-1427...    28  4.6
GI-14270686_7 gi-14270686_7.seq Continuation (7 of 9) of gi-1427...    28  4.6
GI-6324971_07 gi-6324971_07.seq Continuation (7 of 10) of gi-632...    28  6.3
GI-14389432_04 gi-14389432_04.seq Continuation (4 of 11) of gi-1...    28  6.3
GI-6319247 gi|6319247|ref|NC_001133.1| Saccharomyces cerevisiae ...    23  8.3
GI-7276232_4 gi-7276232_4.seq Continuation (4 of 6) of gi-727623...    27  8.6
GI-14627172_6 gi-14627172_6.seq Continuation (6 of 8) of gi-1462...    27  8.6
GI-14389432_07 gi-14389432_07.seq Continuation (7 of 11) of gi-1...    27  8.6
GI-14318439_03 gi-14318439_03.seq Continuation (3 of 11) of gi-1...    27  8.6
GI-14318434_05 gi-14318434_05.seq Continuation (5 of 11) of gi-1...    27  8.6

>GI-6862570_6 gi-6862570_6.seq Continuation (6 of 6) of gi-6862570 from
             base 500001
          Length = 62639

 Score = 31.3 bits (62), Expect(2) = 0.27
 Identities = 10/22 (45%), Positives = 13/22 (58%)
 Frame = +1 / +3

                                   
Query: 394   CVCGCCYCFLWQWARSVAQAVT 459
             CVCGC + ++W W   V   VT
Sbjct: 56931 CVCGCVWVWVWVWVWCVYIYVT 56996


 Score = 18.9 bits (35), Expect(2) = 0.27
 Identities = 6/14 (42%), Positives = 7/14 (49%)
 Frame = +1 / +3

                           
Query: 367   GLWIFQGDSCVCGC 408
             G+W      C CGC
Sbjct: 56829 GVWCVGVVWCGCGC 56870


>GI-6324971_06 gi-6324971_06.seq Continuation (6 of 10) of gi-6324971
             from base 500001
          Length = 110000

 Score = 30.4 bits (60), Expect = 0.94
 Identities = 14/47 (29%), Positives = 19/47 (39%)
 Frame = +1 / -3

                                                            
Query: 277   AKEVGRASKKEETKCLSAAHDIHRPCVEEFGLWIFQGDSCVCGCCYC 417
             A  V +  K +     S A+  +  C       +F    C CGCCYC
Sbjct: 24369 AAAVWQKIKTKPHHLASCAYCYYFYCYHCINSKVFVTTFCPCGCCYC 24229


>GI-6324971_08 gi-6324971_08.seq Continuation (8 of 10) of gi-6324971
             from base 700001
          Length = 110000

 Score = 27.2 bits (53), Expect(2) = 1.4
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -3 / -3

                                        
Query: 412   SSSHIHNCHLERSIDQTLQRTVDGYHA 332
             ++SH H CH   S  Q   RT   +HA
Sbjct: 86427 TASHRHTCH*RHSRRQRFARTGHRFHA 86347


 Score = 20.3 bits (38), Expect(2) = 1.4
 Identities = 7/19 (36%), Positives = 12/19 (62%)
 Frame = -3 / -1

                                
Query: 253   VILFLLDVASMIAGELAGA 197
             ++L  LD+ASM+   +  A
Sbjct: 86324 IVLLALDIASMLIDAILDA 86268


>GI-7839148_15 gi-7839148_15.seq Continuation (15 of 16) of gi-7839148
             from base 1400001
          Length = 110000

 Score = 28.6 bits (56), Expect = 3.3
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +1 / -3

                                  
Query: 406   CCYCFLWQWARSVAQAVTKEN 468
             CCYC    +  SVA+ VTK+N
Sbjct: 12375 CCYCSC*LY*GSVAKLVTKKN 12313


 Score = 27.2 bits (53), Expect(2) = 1.8
 Identities = 10/24 (41%), Positives = 12/24 (49%)
 Frame = +1 / +2

                                     
Query: 346   RPCVEEFGLWIFQGDSCVCGCCYC 417
             R  ++E G   F G    CGCC C
Sbjct: 58106 RSPLKEVGTLTFLGCCGCCGCCCC 58177


 Score = 19.8 bits (37), Expect(2) = 1.8
 Identities = 4/9 (44%), Positives = 6/9 (66%)
 Frame = +1 / +3

                      
Query: 400   CGCCYCFLW 426
             C CC C+ +
Sbjct: 58257 CDCCCCYYY 58283


>GI-6322016_3 gi-6322016_3.seq Continuation (3 of 5) of gi-6322016 from
             base 200001
          Length = 110000

 Score = 29.0 bits (57), Expect = 2.4
 Identities = 9/35 (25%), Positives = 21/35 (59%)
 Frame = -3 / -1

                                                
Query: 253   VILFLLDVASMIAGELAGAHEAAWLEEVSLRHLRS 149
             + +F++ +  +I GEL   H A+W + + +R + +
Sbjct: 72581 IAIFIIWIVYIINGELKNIHIASW*DAIGIRKIHA 72477


>GI-14318450 gi|14318450|ref|NC_001138.2| Saccharomyces cerevisiae
              chromosome VI, complete ch
          Length = 270148

 Score = 28.6 bits (56), Expect = 3.3
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = +1 / -1

                                                   
Query: 664    LSIKPACLGPSLLCLLSINYTPLTSEIPNAIAIYS*L 774
              L +   CL   ++CL S+ ++P   + P+ +++  *L
Sbjct: 160750 LQMSHTCLSFRIICLCSLVFSPFLLDFPSTVSLAC*L 160640


>GI-6323501_04 gi-6323501_04.seq Continuation (4 of 10) of gi-6323501
             from base 300001
          Length = 110000

 Score = 28.6 bits (56), Expect = 3.3
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +1 / -3

                         
Query: 394   CVCGCCYCFLWQ 429
             C CGCC C  W+
Sbjct: 54270 CCCGCCCCGCWR 54235


>GI-14318434_01 gi-14318434_01.seq Continuation (1 of 11) of gi-14318434
             from base 1
          Length = 110000

 Score = 28.6 bits (56), Expect = 3.3
 Identities = 14/32 (43%), Positives = 16/32 (49%)
 Frame = -3 / -3

                                             
Query: 418   SSSSSHIHNCHLERSIDQTLQRTVDGYHALLK 323
             SSS SHIH C   +   Q+   T DG   L K
Sbjct: 56349 SSSPSHIHYCCYYQDTSQSALVTTDGASQLKK 56254


>GI-10383748 gi|10383748|ref|NC_001135.2| Saccharomyces cerevisiae
           chromosome III, complete c
          Length = 316613

 Score = 28.1 bits (55), Expect = 4.6
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +1 / -2

                               
Query: 370 LWIFQGDSCVCGCCYCFLWQ 429
           +W   G   VCGC  C +W 
Sbjct: 82  VWCGCGVVWVCGCGVCGVWV 23


 Score = 28.1 bits (55), Expect = 4.6
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +1 / -3

                                
Query: 370 LWIFQGDSCVCGCCYCFLWQW 432
           +W      C CG C C +W W
Sbjct: 153 VWCVGVGVCGCGVCGCGVWVW 91


 Score = 27.6 bits (54), Expect = 6.3
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1 / +2

                              
Query: 385    GDSCVCGCCYCFLWQW 432
              G  C CG C C +W W
Sbjct: 316535 GVVCGCGVCGCGVWVW 316582


 Score = 27.6 bits (54), Expect(2) = 3.6
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +1 / -1

                            
Query: 394 CVCGCCYCFLWQWARSV 444
           C CG C C +W W   V
Sbjct: 272 CGCGVCGCGVWVWGVGV 222


 Score = 27.2 bits (53), Expect = 8.6
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = +1 / -2

                                        
Query: 370 LWIFQGDSCVCGCCYCFLWQWARSVAQAV 456
           +W+  G  CV   C C +W W   V   V
Sbjct: 283 VWVCVGVVCVGVVCGCGVWVWVWCVGVGV 197


 Score = 18.0 bits (33), Expect(2) = 3.6
 Identities = 7/19 (36%), Positives = 10/19 (51%)
 Frame = +1 / -3

                              
Query: 352 CVEEFGLWIFQGDSCVCGC 408
           CV    +W++     VCGC
Sbjct: 354 CVGVGVVWVWCVWVWVCGC 298


>GI-14318434_07 gi-14318434_07.seq Continuation (7 of 11) of
            gi-14318434 from base 600001
          Length = 110000

 Score = 26.7 bits (52), Expect(2) = 4.2
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +2 / -1

                                     
Query: 572  YAVILCDMVSCYYIFSLFIPFLVYS 646
            + VILC +   Y    + IP  +YS
Sbjct: 6113 FIVILCGIRYTYMFSEIAIPIALYS 6039


 Score = 18.9 bits (35), Expect(2) = 4.2
 Identities = 6/14 (42%), Positives = 9/14 (63%)
 Frame = +1 / -1

                          
Query: 406  CCYCFLWQWARSVA 447
            CC CF +  +R V+
Sbjct: 6245 CCRCFSFSNSRLVS 6204


>GI-14318434_06 gi-14318434_06.seq Continuation (6 of 11) of gi-14318434
              from base 500001
          Length = 110000

 Score = 26.7 bits (52), Expect(2) = 4.2
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +2 / -3

                                       
Query: 572    YAVILCDMVSCYYIFSLFIPFLVYS 646
              + VILC +   Y    + IP  +YS
Sbjct: 106113 FIVILCGIRYTYMFSEIAIPIALYS 106039


 Score = 18.9 bits (35), Expect(2) = 4.2
 Identities = 6/14 (42%), Positives = 9/14 (63%)
 Frame = +1 / -3

                            
Query: 406    CCYCFLWQWARSVA 447
              CC CF +  +R V+
Sbjct: 106245 CCRCFSFSNSRLVS 106204


>GI-7839148_11 gi-7839148_11.seq Continuation (11 of 16) of gi-7839148
             from base 1000001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.6
 Identities = 12/43 (27%), Positives = 22/43 (50%)
 Frame = +2 / +3

                                                        
Query: 515   LVLCLIMTPAVGLTNTLLSYAVILCDMVSCYYIFSLFIPFLVY 643
             ++LC I  P +GLT +   + +  C     ++IF   I  +V+
Sbjct: 71259 ILLCFIQFPQIGLTRSQPIFLLRHCTHAGGFFIFLPRISIVVF 71387


>GI-7839148_06 gi-7839148_06.seq Continuation (6 of 16) of gi-7839148
             from base 500001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.6
 Identities = 7/13 (53%), Positives = 9/13 (68%)
 Frame = +1 / -3

                          
Query: 388   DSCVCGCCYCFLW 426
             + C+CGCC  F W
Sbjct: 65640 ERCLCGCCV*FYW 65602


>GI-6862570_2 gi-6862570_2.seq Continuation (2 of 6) of gi-6862570 from
             base 100001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.6
 Identities = 13/31 (41%), Positives = 16/31 (50%)
 Frame = +1 / -1

                                            
Query: 316   KCLSAAHDIHRPCVEEFGLWIFQGDSCVCGC 408
             KC S +  IHR C+  F L+  Q   C C C
Sbjct: 37868 KCRSCSFCIHRWCLGSFCLFQKQRFICRCVC 37776


>GI-6323501_07 gi-6323501_07.seq Continuation (7 of 10) of gi-6323501
             from base 600001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.6
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2 / +1

                                 
Query: 560   TLLSYAVILCDMVSCYYIFS 619
             TL  YA+  C++  C+ +FS
Sbjct: 42127 TLSQYAITCCNLFRCFSLFS 42186


>GI-14277709_4 gi-14277709_4.seq Continuation (4 of 7) of gi-14277709
             from base 300001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.6
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +1 / +2

                        
Query: 394   CVCGCCYCFLW 426
             C C CCYCF +
Sbjct: 82145 CYCCCCYCFYY 82177


>GI-14270686_7 gi-14270686_7.seq Continuation (7 of 9) of gi-14270686
             from base 600001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.6
 Identities = 9/17 (52%), Positives = 11/17 (63%)
 Frame = -3 / -1

                              
Query: 508   GHLWFSFFHVVFTRFPW 458
             G LW  F+HV+FT   W
Sbjct: 32816 GILWVVFWHVIFTSSTW 32766


>GI-6324971_07 gi-6324971_07.seq Continuation (7 of 10) of gi-6324971
             from base 600001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.3
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -3 / +3

                                           
Query: 331   LLKDTWFLLFLKLVQPL*RLIEPRPAVILF 242
             L+K +W LL L+L+  L +LI   P + LF
Sbjct: 52293 LIK*SWLLL*LRLL*RLLQLIIEHPVIQLF 52382


>GI-14389432_04 gi-14389432_04.seq Continuation (4 of 11) of gi-14389432
             from base 300001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.3
 Identities = 11/38 (28%), Positives = 19/38 (49%)
 Frame = +2 / +2

                                                   
Query: 524   CLIMTPAVGLTNTLLSYAVILCDMVSCYYIFSLFIPFL 637
             C+I    + L   LL +  +LC +   + +F +FI  L
Sbjct: 51416 CIIFILVIPLIFILLFFVFVLCILSQIFVLFDVFIVIL 51529


>GI-6319247 gi|6319247|ref|NC_001133.1| Saccharomyces cerevisiae
              chromosome I, complete chro
          Length = 230203

 Score = 23.1 bits (44), Expect(2) = 8.3
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = -3 / -1

                             
Query: 100    WREQASLSRDRRCVR 56
              WR  A   R  RCVR
Sbjct: 191257 WRAAAQCGRPHRCVR 191213


 Score = 21.2 bits (40), Expect(2) = 8.3
 Identities = 8/15 (53%), Positives = 9/15 (59%)
 Frame = -1 / -1

                             
Query: 210    SWRERMRLPGSRRCR 166
              SW  R+R  GS  CR
Sbjct: 191308 SW*HRVRSSGSSLCR 191264


>GI-7276232_4 gi-7276232_4.seq Continuation (4 of 6) of gi-7276232 from
             base 300001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.6
 Identities = 7/16 (43%), Positives = 9/16 (55%)
 Frame = +1 / +2

                             
Query: 367   GLWIFQGDSCVCGCCY 414
             G W++    C C CCY
Sbjct: 11021 GYWLWGCGICCCSCCY 11068


>GI-14627172_6 gi-14627172_6.seq Continuation (6 of 8) of gi-14627172
             from base 500001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.6
 Identities = 13/28 (46%), Positives = 16/28 (56%)
 Frame = +3 / +1

                                         
Query: 633   F*YILASNLFPFN*TCLSRSFSPLLIIY 716
             F Y L   LFPF *  LSR F  + I++
Sbjct: 16606 FIYFLQVLLFPFT*LILSRGFLVISILF 16689


>GI-14389432_07 gi-14389432_07.seq Continuation (7 of 11) of gi-14389432
             from base 600001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.6
 Identities = 15/40 (37%), Positives = 24/40 (59%)
 Frame = +1 / -2

                                                     
Query: 694   SLLCLLSINYTPLTSEIPNAIAIYS*LYIPK*YSLLSIPC 813
             SL+CLL+++   L+S + N   IYS   + K* S+ +  C
Sbjct: 39112 SLICLLALSMVSLSSPVWNLHWIYSDGVLSK*DSI*AKAC 38993


>GI-14318439_03 gi-14318439_03.seq Continuation (3 of 11) of gi-14318439
             from base 200001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.6
 Identities = 7/16 (43%), Positives = 10/16 (61%)
 Frame = +1 / +2

                             
Query: 391   SCVCGCCYCFLWQWAR 438
             +C   CC+C L  W+R
Sbjct: 69272 ACYAKCCFCLLHIWSR 69319


>GI-14318434_05 gi-14318434_05.seq Continuation (5 of 11) of gi-14318434
             from base 400001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.6
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = +1 / +1

                              
Query: 373   WIFQGDSCVCGCCYCFL 423
             W   G  C C C Y FL
Sbjct: 59503 WAMSGWCCACNCLYSFL 59553


  Database: /home/pmiguel/yeast/yeast
    Posted date:  Oct 27, 2001  2:26 PM
  Number of letters in database: 13,206,306
  Number of sequences in database:  122
  
Lambda     K      H
   0.318    0.135    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 24004902
Number of Sequences: 122
Number of extensions: 320247
Number of successful extensions: 21911
Number of sequences better than 10.0: 25
length of query: 314
length of database: 4,402,102
effective HSP length: 44
effective length of query: 269
effective length of database: 4,396,734
effective search space: 1182721446
effective search space used: 1182721446
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 53 (27.2 bits)