TBLASTX 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCPvsSce/blast/0941_G07_M13ZS5.seq
         (857 letters)

Database: /home/pmiguel/yeast/yeast
           122 sequences; 13,206,306 total letters

Searching............................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

GI-10383748 gi|10383748|ref|NC_001135.2| Saccharomyces cerevisia...    32  0.32
GI-14277709_7 gi-14277709_7.seq Continuation (7 of 7) of gi-1427...    32  0.32
GI-6322016_1 gi-6322016_1.seq Continuation (1 of 5) of gi-632201...    29  3.0
GI-6324971_01 gi-6324971_01.seq Continuation (1 of 10) of gi-632...    28  4.1
GI-7839148_04 gi-7839148_04.seq Continuation (4 of 16) of gi-783...    28  5.6
GI-14318439_10 gi-14318439_10.seq Continuation (10 of 11) of gi-...    28  5.6
GI-14318439_05 gi-14318439_05.seq Continuation (5 of 11) of gi-1...    28  5.6
GI-14318434_06 gi-14318434_06.seq Continuation (6 of 11) of gi-1...    28  5.6

>GI-10383748 gi|10383748|ref|NC_001135.2| Saccharomyces cerevisiae
            chromosome III, complete c
          Length = 316613

 Score = 31.8 bits (63), Expect = 0.32
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3 / -3

                              
Query: 210  MLILXHIHSTFCYWAETG 263
            +L+L H+HST C+W   G
Sbjct: 7158 LLLLLHLHSTVCWWQRQG 7105


>GI-14277709_7 gi-14277709_7.seq Continuation (7 of 7) of gi-14277709
             from base 600001
          Length = 66445

 Score = 31.8 bits (63), Expect = 0.32
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3 / +1

                               
Query: 210   MLILXHIHSTFCYWAETG 263
             +L+L H+HST C+W   G
Sbjct: 62239 LLLLLHLHSTVCWWQRQG 62292


>GI-6322016_1 gi-6322016_1.seq Continuation (1 of 5) of gi-6322016 from
             base 1
          Length = 110000

 Score = 28.6 bits (56), Expect = 3.0
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1 / -2

                                    
Query: 314   SLSPSPPVKPWDEAVRNSCFRPV 246
             S    P  +PW  +VRNSC+ P+
Sbjct: 97966 SAGTRPFHRPWKPSVRNSCWTPL 97898


>GI-6324971_01 gi-6324971_01.seq Continuation (1 of 10) of gi-6324971
             from base 1
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.1
 Identities = 16/58 (27%), Positives = 24/58 (40%)
 Frame = +2 / +2

                                                                       
Query: 176   FRRPAAPTSSVNADIXSYPLYILLLGGNRSSSQLHPRALLXXXXXXXXXXPPLFHPAA 349
             F+  +   S++NA+       I +LGG   S Q+HP              P + H AA
Sbjct: 47693 FQTGSGTQSNMNANEVISNRAIEILGGKIGSKQVHPNNHCNQSQSSNDTFPTVMHIAA 47866


>GI-7839148_04 gi-7839148_04.seq Continuation (4 of 16) of gi-7839148
             from base 300001
          Length = 110000

 Score = 27.6 bits (54), Expect = 5.6
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +3 / -3

                                            
Query: 96    ISQGTRHVVRN*QFFISIALPWQTQCTSEDQ 188
             + +  R V+RN + F    LPW   C+  +Q
Sbjct: 70725 LGRACRRVIRNSRLFDYYGLPWILLCSHREQ 70633


>GI-14318439_10 gi-14318439_10.seq Continuation (10 of 11) of
             gi-14318439 from base 900001
          Length = 110000

 Score = 27.6 bits (54), Expect = 5.6
 Identities = 10/16 (62%), Positives = 13/16 (80%)
 Frame = +3 / +2

                             
Query: 699   YLPLIPFSLNILSYYY 746
             YLP + F+L ILSYY+
Sbjct: 18032 YLPTLYFALMILSYYF 18079


>GI-14318439_05 gi-14318439_05.seq Continuation (5 of 11) of gi-14318439
             from base 400001
          Length = 110000

 Score = 27.6 bits (54), Expect = 5.6
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +2 / -2

                                 
Query: 326   PPLFHPAADSPAPGSCFLLI 385
             PP F  +A S AP SC  LI
Sbjct: 55081 PPFFKTSAASSAPSSCISLI 55022


>GI-14318434_06 gi-14318434_06.seq Continuation (6 of 11) of gi-14318434
             from base 500001
          Length = 110000

 Score = 27.6 bits (54), Expect = 5.6
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -2 / +2

                                 
Query: 193   CSWSSEVHCVCQGRAMLMKN 134
             C WSS V C C     L +N
Sbjct: 50003 CRWSSYVFCCCGNTCFLFRN 50062


  Database: /home/pmiguel/yeast/yeast
    Posted date:  Oct 27, 2001  2:26 PM
  Number of letters in database: 13,206,306
  Number of sequences in database:  122
  
Lambda     K      H
   0.318    0.135    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 16134919
Number of Sequences: 122
Number of extensions: 186896
Number of successful extensions: 11334
Number of sequences better than 10.0: 8
length of query: 285
length of database: 4,402,102
effective HSP length: 44
effective length of query: 241
effective length of database: 4,396,734
effective search space: 1059612894
effective search space used: 1059612894
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 52 (26.7 bits)