TBLASTX 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCPvsSce/blast/0941_G09_M17ZS5.seq
         (1004 letters)

Database: /home/pmiguel/yeast/yeast
           122 sequences; 13,206,306 total letters

Searching............................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

GI-6319247 gi|6319247|ref|NC_001133.1| Saccharomyces cerevisiae ...    30  1.0
GI-7839148_14 gi-7839148_14.seq Continuation (14 of 16) of gi-78...    29  2.6
GI-7839148_13 gi-7839148_13.seq Continuation (13 of 16) of gi-78...    29  2.6
GI-14627172_4 gi-14627172_4.seq Continuation (4 of 8) of gi-1462...    29  2.6
GI-14318434_05 gi-14318434_05.seq Continuation (5 of 11) of gi-1...    29  2.6
GI-6226515 gi|6226515|ref|NC_001224.1| Saccharomyces cerevisiae ...    29  2.6
GI-14627172_6 gi-14627172_6.seq Continuation (6 of 8) of gi-1462...    22  2.6
GI-14318439_01 gi-14318439_01.seq Continuation (1 of 11) of gi-1...    29  3.6
GI-14389432_02 gi-14389432_02.seq Continuation (2 of 11) of gi-1...    28  4.5
GI-6862570_4 gi-6862570_4.seq Continuation (4 of 6) of gi-686257...    28  4.9
GI-14627172_5 gi-14627172_5.seq Continuation (5 of 8) of gi-1462...    28  4.9
GI-14318439_05 gi-14318439_05.seq Continuation (5 of 11) of gi-1...    28  4.9
GI-14627172_3 gi-14627172_3.seq Continuation (3 of 8) of gi-1462...    23  5.7
GI-7839148_07 gi-7839148_07.seq Continuation (7 of 16) of gi-783...    28  6.8
GI-7839148_06 gi-7839148_06.seq Continuation (6 of 16) of gi-783...    28  6.8
GI-6862570_2 gi-6862570_2.seq Continuation (2 of 6) of gi-686257...    28  6.8
GI-6324971_08 gi-6324971_08.seq Continuation (8 of 10) of gi-632...    28  6.8
GI-14389432_03 gi-14389432_03.seq Continuation (3 of 11) of gi-1...    28  6.8
GI-14318439_07 gi-14318439_07.seq Continuation (7 of 11) of gi-1...    28  6.8
GI-7276232_1 gi-7276232_1.seq Continuation (1 of 6) of gi-727623...    27  9.3
GI-14318439_11 gi-14318439_11.seq Continuation (11 of 11) of gi-...    27  9.3
GI-14318434_08 gi-14318434_08.seq Continuation (8 of 11) of gi-1...    27  9.3
GI-14277709_3 gi-14277709_3.seq Continuation (3 of 7) of gi-1427...    27  9.3
GI-14318450 gi|14318450|ref|NC_001138.2| Saccharomyces cerevisia...    27  9.3

>GI-6319247 gi|6319247|ref|NC_001133.1| Saccharomyces cerevisiae
             chromosome I, complete chro
          Length = 230203

 Score = 30.4 bits (60), Expect = 1.0
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -1 / +1

                                                     
Query: 461   NL*FRMIRLKAGDRTITGCLSLQRIYLCFFIKVENIWFRH 342
             NL   +I ++AG      CL +   +  FF+KV N+ F H
Sbjct: 68053 NLCNLIITVRAGLVISFSCLIIFHFFFFFFLKVHNLGFEH 68172


>GI-7839148_14 gi-7839148_14.seq Continuation (14 of 16) of gi-7839148
            from base 1300001
          Length = 110000

 Score = 29.0 bits (57), Expect = 2.6
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +2 / +3

                                       
Query: 611  LYFLSFSVISHLIYICVRCSSITIYLF 691
            L+  SFS+  H+  I  RCS + +++F
Sbjct: 7569 LWRCSFSICLHIFLISTRCSILDVHVF 7649


>GI-7839148_13 gi-7839148_13.seq Continuation (13 of 16) of gi-7839148
              from base 1200001
          Length = 110000

 Score = 29.0 bits (57), Expect = 2.6
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +2 / +1

                                         
Query: 611    LYFLSFSVISHLIYICVRCSSITIYLF 691
              L+  SFS+  H+  I  RCS + +++F
Sbjct: 107569 LWRCSFSICLHIFLISTRCSILDVHVF 107649


>GI-14627172_4 gi-14627172_4.seq Continuation (4 of 8) of gi-14627172
             from base 300001
          Length = 110000

 Score = 29.0 bits (57), Expect = 2.6
 Identities = 9/22 (40%), Positives = 17/22 (76%)
 Frame = -3 / +3

                                   
Query: 414   NWMPLTPKNIFVFFYQG*KYMV 349
             N++ ++P+N ++FFY+ * Y V
Sbjct: 11412 NFLRISPRNAYIFFYRR*IYFV 11477


 Score = 28.1 bits (55), Expect = 4.9
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +2 / -1

                                       
Query: 803    YLATRTLSHWCKQLLX*TFLLFPAY 877
              +L TRTL  +CK  + *  L  PAY
Sbjct: 102686 HLHTRTLQPYCKAFVH*PLLPLPAY 102612


>GI-14318434_05 gi-14318434_05.seq Continuation (5 of 11) of gi-14318434
             from base 400001
          Length = 110000

 Score = 29.0 bits (57), Expect = 2.6
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +3 / +3

                                      
Query: 702   FLRRIKLISAISASRSNYCSFSLFL 776
             F+ R  L  +I   R+NYC++S+F+
Sbjct: 97635 FISRFLLNGSIDGWRTNYCNYSVFV 97709


>GI-6226515 gi|6226515|ref|NC_001224.1| Saccharomyces cerevisiae
             mitochondrion, complete gen
          Length = 85779

 Score = 29.0 bits (57), Expect = 2.6
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +2 / -3

                                                  
Query: 584   LMFINT*SLLYFLSFSVISHLIYICVRCSSITIYLFK 694
             L F+   S+LY ++  +   LIYI ++CS   + L K
Sbjct: 59320 LFFVTHVSILYLINTYIN**LIYIIIKCSITILLLLK 59210


>GI-14627172_6 gi-14627172_6.seq Continuation (6 of 8) of gi-14627172
             from base 500001
          Length = 110000

 Score = 22.1 bits (42), Expect(3) = 2.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3 / +1

                        
Query: 465   LFYLSFSMSIL 497
             LF+LSFS  +L
Sbjct: 16573 LFHLSFSFRVL 16605


 Score = 21.7 bits (41), Expect(3) = 2.6
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +3 / +3

                                   
Query: 753   YCSFSLFLL*HSNIPLGTLPRV 818
             + SF LFLL  S I L  LP+V
Sbjct: 16737 WISFRLFLLAWSLILL*ALPKV 16802


 Score = 20.3 bits (38), Expect(3) = 2.6
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +2 / +1

                                          
Query: 608   LLYFLSFSVISHLIYICVRCSSITIYLFK 694
             L+    F VIS L ++  +CS    ++F+
Sbjct: 16648 LILSRGFLVISILFHLSQQCSRPETHVFR 16734


>GI-14318439_01 gi-14318439_01.seq Continuation (1 of 11) of gi-14318439
             from base 1
          Length = 110000

 Score = 28.6 bits (56), Expect = 3.6
 Identities = 9/21 (42%), Positives = 14/21 (65%)
 Frame = -1 / +1

                                  
Query: 398   LQRIYLCFFIKVENIWFRHLE 336
             LQ+IY CF +   N W+R+ +
Sbjct: 36952 LQQIYRCFCLIPSNTWYRYYQ 37014


 Score = 28.1 bits (55), Expect = 4.9
 Identities = 11/28 (39%), Positives = 16/28 (56%)
 Frame = -1 / -2

                                         
Query: 437   LKAGDRTITGCLSLQRIYLCFFIKVENI 354
             L +GD+ I    S Q ++ CFF  + NI
Sbjct: 44383 LSSGDKCIKLLTSSQDVFKCFFTSLSNI 44300


 Score = 27.2 bits (53), Expect = 9.3
 Identities = 8/23 (34%), Positives = 13/23 (55%)
 Frame = +2 / -2

                                    
Query: 620   LSFSVISHLIYICVRCSSITIYL 688
             L + V+SHL  +C  C  +  +L
Sbjct: 47992 LRYPVLSHLSLVCKTCGKLHSFL 47924


>GI-14389432_02 gi-14389432_02.seq Continuation (2 of 11) of gi-14389432
              from base 100001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3 / -3

                                 
Query: 426    RSHHNWMPLTPKNIFVFFY 370
              R H  W+   PKN+ V+F+
Sbjct: 108834 RQHSKWIEHLPKNLLVYFH 108778


 Score = 26.3 bits (51), Expect(2) = 4.5
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -1 / -1

                                       
Query: 536   SHAPRRVKTGEREQNRHRERKIKKFN 459
             SH PRR     R+  R+RER+ K+ +
Sbjct: 11495 SHCPRRP*RNCRKSKRNRERRRKELS 11418


 Score = 19.4 bits (36), Expect(2) = 4.5
 Identities = 8/23 (34%), Positives = 10/23 (42%)
 Frame = -3 / -3

                                    
Query: 582   HYAERPSFTNNPKAMITCTAQSQ 514
             H+ ERP   N  +   T    SQ
Sbjct: 11634 HWLERPLKVNCKRKKETFYVMSQ 11566


>GI-6862570_4 gi-6862570_4.seq Continuation (4 of 6) of gi-6862570 from
             base 300001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.9
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +2 / -2

                                        
Query: 614   YFLSFSVISHLIYICVRCSSITIYLFK 694
             +++ F  ++ L+ IC R  S  ++LFK
Sbjct: 23851 WYMCFGDVTFLLVICARIESWRVFLFK 23771


 Score = 27.2 bits (53), Expect = 9.3
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +1 / +1

                                             
Query: 571   LGIMLNVYKYMIATLLFIFFSYFASHIHLCAL 666
             L + L ++ ++   L ++FF+YF S  H+  L
Sbjct: 78127 LFLFLFLFLFLFLFLFYLFFAYFRSTQHIIIL 78222


>GI-14627172_5 gi-14627172_5.seq Continuation (5 of 8) of gi-14627172
            from base 400001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.9
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +2 / -2

                                     
Query: 803  YLATRTLSHWCKQLLX*TFLLFPAY 877
            +L TRTL  +CK  + *  L  PAY
Sbjct: 2686 HLHTRTLQPYCKAFVH*PLLPLPAY 2612


>GI-14318439_05 gi-14318439_05.seq Continuation (5 of 11) of gi-14318439
             from base 400001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.9
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2 / +1

                                       
Query: 608   LLYFLSFSVISHLIYICVRCSSITIY 685
             LL+F  FSV SH +  C    S+ +Y
Sbjct: 67555 LLFFFVFSVHSHPVPFCYEALSLILY 67632


>GI-14627172_3 gi-14627172_3.seq Continuation (3 of 8) of gi-14627172
             from base 200001
          Length = 110000

 Score = 23.1 bits (44), Expect(3) = 5.7
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = +2 / -1

                                                      
Query: 581   CLMFINT*SLLYFLSFSVISHLIYICVRCSSITIYLFKCVV 703
             C++F    S+  +       +LI+    C  ITIY F  V+
Sbjct: 18338 CILFRYGHSVCLWWRLGKPGNLIFYGALCGVITIYSFTKVI 18216


 Score = 21.7 bits (41), Expect(3) = 5.7
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2 / -1

                                  
Query: 815   RTLSHWCKQLLX*TFLLFPAY 877
             R    +C+ LL *+F L+P++
Sbjct: 18197 RNFCIYCR*LLR*SFWLYPSF 18135


 Score = 18.0 bits (33), Expect(3) = 5.7
 Identities = 4/7 (57%), Positives = 6/7 (85%)
 Frame = +2 / -3

                    
Query: 479   FLYVYFV 499
             F Y++FV
Sbjct: 18348 FFYMHFV 18328


>GI-7839148_07 gi-7839148_07.seq Continuation (7 of 16) of gi-7839148
            from base 600001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.8
 Identities = 12/32 (37%), Positives = 17/32 (52%)
 Frame = +2 / -3

                                            
Query: 404  GIQLWCDLPPLTLSF*ITG*TFLSFFLYVYFV 499
            G+QL   LPP+T +F +   T  +   Y Y V
Sbjct: 7410 GLQLQLQLPPITWTFRLVVQTSQTLITYTYLV 7315


>GI-7839148_06 gi-7839148_06.seq Continuation (6 of 16) of gi-7839148 from
              base 500001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.8
 Identities = 12/32 (37%), Positives = 17/32 (52%)
 Frame = +2 / -2

                                              
Query: 404    GIQLWCDLPPLTLSF*ITG*TFLSFFLYVYFV 499
              G+QL   LPP+T +F +   T  +   Y Y V
Sbjct: 107410 GLQLQLQLPPITWTFRLVVQTSQTLITYTYLV 107315


>GI-6862570_2 gi-6862570_2.seq Continuation (2 of 6) of gi-6862570 from
             base 100001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.8
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +1 / +3

                                 
Query: 742   LVPTTVLFPFFSYNTRTYRL 801
             L+ T  LFP F +NT+TY L
Sbjct: 16356 LMLTFPLFPMFFFNTKTYYL 16415


>GI-6324971_08 gi-6324971_08.seq Continuation (8 of 10) of gi-6324971
             from base 700001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.8
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -2 / -1

                                     
Query: 277   GLVGVDGASDVSLVAGEKKDDLSR 206
             G++G+D  SD + V   +KD +SR
Sbjct: 46073 GVIGIDEGSDEAYVKDARKDTVSR 46002


>GI-14389432_03 gi-14389432_03.seq Continuation (3 of 11) of
            gi-14389432 from base 200001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3 / -1

                               
Query: 426  RSHHNWMPLTPKNIFVFFY 370
            R H  W+   PKN+ V+F+
Sbjct: 8834 RQHSKWIEHLPKNLLVYFH 8778


>GI-14318439_07 gi-14318439_07.seq Continuation (7 of 11) of gi-14318439
             from base 600001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.8
 Identities = 10/17 (58%), Positives = 12/17 (69%)
 Frame = -3 / -2

                              
Query: 429   GRSHHNWMPLTPKNIFV 379
             GR+H NW  +T K IFV
Sbjct: 84661 GRTHDNWSIITVKPIFV 84611


>GI-7276232_1 gi-7276232_1.seq Continuation (1 of 6) of gi-7276232 from
             base 1
          Length = 110000

 Score = 27.2 bits (53), Expect = 9.3
 Identities = 10/38 (26%), Positives = 21/38 (54%)
 Frame = +2 / +1

                                                   
Query: 584   LMFINT*SLLYFLSFSVISHLIYICVRCSSITIYLFKC 697
             L+FI   +++YF+   +      +C +C+S+   +F C
Sbjct: 86320 LLFIIYIAIIYFVFIRISHFSFSLCRQCNSLGRMIFMC 86433


>GI-14318439_11 gi-14318439_11.seq Continuation (11 of 11) of
             gi-14318439 from base 1000001
          Length = 91284

 Score = 27.2 bits (53), Expect = 9.3
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = +2 / -3

                               
Query: 608   LLYFLSFSVISHLIYICV 661
             +LY++  S+I H+I IC+
Sbjct: 55921 ILYYVCCSIIQHIIEICI 55868


>GI-14318434_08 gi-14318434_08.seq Continuation (8 of 11) of gi-14318434
             from base 700001
          Length = 110000

 Score = 27.2 bits (53), Expect = 9.3
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +1 / +2

                                     
Query: 628   FSYFASHIHLCAL**YHYLSL*MR 699
             F Y +SH++   L**YH+ S *+R
Sbjct: 77606 FGYGSSHVNGLPL**YHHWSF*IR 77677


>GI-14277709_3 gi-14277709_3.seq Continuation (3 of 7) of gi-14277709
             from base 200001
          Length = 110000

 Score = 27.2 bits (53), Expect = 9.3
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +2 / -2

                                            
Query: 554   LVKLGRSA*CLMFINT*SLLYFLSFSVISHL 646
             L  L R   C++F+    +  F S S ISH+
Sbjct: 30586 LFSLSRDKVCILFVTLLIITIFFSMSFISHI 30494


>GI-14318450 gi|14318450|ref|NC_001138.2| Saccharomyces cerevisiae
             chromosome VI, complete ch
          Length = 270148

 Score = 27.2 bits (53), Expect = 9.3
 Identities = 8/32 (25%), Positives = 15/32 (46%)
 Frame = -2 / -3

                                             
Query: 139   CSAGEHGEAEEERVQNLHSHGSIARSV*CAVC 44
             C     G AE++R +N+H++          +C
Sbjct: 96017 CDEQNRGRAEKQRKENVHANTGAGSGTHLYIC 95922


  Database: /home/pmiguel/yeast/yeast
    Posted date:  Oct 27, 2001  2:26 PM
  Number of letters in database: 13,206,306
  Number of sequences in database:  122
  
Lambda     K      H
   0.318    0.135    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 25273386
Number of Sequences: 122
Number of extensions: 341451
Number of successful extensions: 22244
Number of sequences better than 10.0: 24
length of query: 334
length of database: 4,402,102
effective HSP length: 44
effective length of query: 290
effective length of database: 4,396,734
effective search space: 1275052860
effective search space used: 1275052860
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 53 (27.2 bits)