TBLASTX 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCPvsSce/blast/0941_H01_O01ZS5.seq
         (1395 letters)

Database: /home/pmiguel/yeast/yeast
           122 sequences; 13,206,306 total letters

Searching............................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

GI-14627172_6 gi-14627172_6.seq Continuation (6 of 8) of gi-1462...    28  4.6
GI-6862570_5 gi-6862570_5.seq Continuation (5 of 6) of gi-686257...    29  5.2
GI-7839148_02 gi-7839148_02.seq Continuation (2 of 16) of gi-783...    28  7.1
GI-6324971_06 gi-6324971_06.seq Continuation (6 of 10) of gi-632...    28  7.1
GI-6323989_5 gi-6323989_5.seq Continuation (5 of 8) of gi-632398...    28  9.8
GI-6323501_02 gi-6323501_02.seq Continuation (2 of 10) of gi-632...    28  9.8
GI-14389432_10 gi-14389432_10.seq Continuation (10 of 11) of gi-...    28  9.8
GI-14318439_10 gi-14318439_10.seq Continuation (10 of 11) of gi-...    28  9.8

>GI-14627172_6 gi-14627172_6.seq Continuation (6 of 8) of gi-14627172
             from base 500001
          Length = 110000

 Score = 27.6 bits (54), Expect(2) = 4.6
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -3 / -1

                              
Query: 520   IFFFFXXXXXXXFFFFF 470
             IF FF       FFFFF
Sbjct: 25529 IFIFFHFFVSSSFFFFF 25479


 Score = 18.5 bits (34), Expect(2) = 4.6
 Identities = 5/5 (100%), Positives = 5/5 (100%)
 Frame = -1 / -3

                  
Query: 483   FFFFF 469
             FFFFF
Sbjct: 25410 FFFFF 25396


>GI-6862570_5 gi-6862570_5.seq Continuation (5 of 6) of gi-6862570 from
             base 400001
          Length = 110000

 Score = 28.6 bits (56), Expect = 5.2
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = -3 / -2

                               
Query: 517   FFFFXXXXXXXFFFFFFP 464
             FFF        FFFFFFP
Sbjct: 22846 FFFLIIYSTLFFFFFFFP 22793


 Score = 28.1 bits (55), Expect = 7.1
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -3 / -2

                              
Query: 517   FFFFXXXXXXXFFFFFF 467
             FFFF       FFFFFF
Sbjct: 22849 FFFFLIIYSTLFFFFFF 22799


>GI-7839148_02 gi-7839148_02.seq Continuation (2 of 16) of gi-7839148
             from base 100001
          Length = 110000

 Score = 28.1 bits (55), Expect = 7.1
 Identities = 10/18 (55%), Positives = 11/18 (60%)
 Frame = -3 / +3

                               
Query: 520   IFFFFXXXXXXXFFFFFF 467
             +FFFF       FFFFFF
Sbjct: 26514 LFFFFFLFLFFFFFFFFF 26567


>GI-6324971_06 gi-6324971_06.seq Continuation (6 of 10) of gi-6324971
             from base 500001
          Length = 110000

 Score = 28.1 bits (55), Expect = 7.1
 Identities = 10/18 (55%), Positives = 11/18 (60%)
 Frame = -3 / +1

                               
Query: 520   IFFFFXXXXXXXFFFFFF 467
             +FFFF       FFFFFF
Sbjct: 36676 LFFFFFFFFFFFFFFFFF 36729


>GI-6323989_5 gi-6323989_5.seq Continuation (5 of 8) of gi-6323989 from
             base 400001
          Length = 110000

 Score = 27.6 bits (54), Expect = 9.8
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -3 / +1

                              
Query: 517   FFFFXXXXXXXFFFFFF 467
             FFFF       FFFFFF
Sbjct: 15055 FFFFSFFFFFLFFFFFF 15105


>GI-6323501_02 gi-6323501_02.seq Continuation (2 of 10) of gi-6323501
             from base 100001
          Length = 110000

 Score = 27.6 bits (54), Expect = 9.8
 Identities = 10/18 (55%), Positives = 11/18 (60%)
 Frame = -3 / +3

                               
Query: 520   IFFFFXXXXXXXFFFFFF 467
             I+FFF       FFFFFF
Sbjct: 75879 IYFFFFFFIIIVFFFFFF 75932


>GI-14389432_10 gi-14389432_10.seq Continuation (10 of 11) of
             gi-14389432 from base 900001
          Length = 110000

 Score = 27.6 bits (54), Expect = 9.8
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -3 / +1

                              
Query: 517   FFFFXXXXXXXFFFFFF 467
             FFFF       FFFFFF
Sbjct: 50350 FFFFALPSFREFFFFFF 50400


>GI-14318439_10 gi-14318439_10.seq Continuation (10 of 11) of
             gi-14318439 from base 900001
          Length = 110000

 Score = 27.6 bits (54), Expect = 9.8
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -1 / +3

                              
Query: 519   FFFFXXXXXXXNFFFFF 469
             FFFF       NFFFFF
Sbjct: 76983 FFFFIFLYVFSNFFFFF 77033


  Database: /home/pmiguel/yeast/yeast
    Posted date:  Oct 27, 2001  2:26 PM
  Number of letters in database: 13,206,306
  Number of sequences in database:  122
  
Lambda     K      H
   0.318    0.135    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 12555146
Number of Sequences: 122
Number of extensions: 75128
Number of successful extensions: 8919
Number of sequences better than 10.0: 8
length of query: 465
length of database: 4,402,102
effective HSP length: 47
effective length of query: 417
effective length of database: 4,396,368
effective search space: 1833285456
effective search space used: 1833285456
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 54 (27.6 bits)