TBLASTX 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCPvsSce/blast/0941_H05_O09ZS5.seq
         (930 letters)

Database: /home/pmiguel/yeast/yeast
           122 sequences; 13,206,306 total letters

Searching............................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

GI-14389432_07 gi-14389432_07.seq Continuation (7 of 11) of gi-1...    30  0.92
GI-14389432_06 gi-14389432_06.seq Continuation (6 of 11) of gi-1...    30  0.92
GI-14318439_10 gi-14318439_10.seq Continuation (10 of 11) of gi-...    30  1.3
GI-14270686_6 gi-14270686_6.seq Continuation (6 of 9) of gi-1427...    29  3.1
GI-6319247 gi|6319247|ref|NC_001133.1| Saccharomyces cerevisiae ...    29  3.3
GI-14389432_01 gi-14389432_01.seq Continuation (1 of 11) of gi-1...    29  3.3
GI-7276232_2 gi-7276232_2.seq Continuation (2 of 6) of gi-727623...    27  4.1
GI-14318434_11 gi-14318434_11.seq Continuation (11 of 11) of gi-...    28  4.2
GI-6862570_4 gi-6862570_4.seq Continuation (4 of 6) of gi-686257...    28  4.5
GI-14277709_4 gi-14277709_4.seq Continuation (4 of 7) of gi-1427...    28  4.5
GI-14318450 gi|14318450|ref|NC_001138.2| Saccharomyces cerevisia...    28  6.2
GI-14627172_2 gi-14627172_2.seq Continuation (2 of 8) of gi-1462...    28  6.2
GI-14318439_09 gi-14318439_09.seq Continuation (9 of 11) of gi-1...    28  6.2
GI-14277709_3 gi-14277709_3.seq Continuation (3 of 7) of gi-1427...    28  6.2
GI-6324971_05 gi-6324971_05.seq Continuation (5 of 10) of gi-632...    27  8.5
GI-6323501_03 gi-6323501_03.seq Continuation (3 of 10) of gi-632...    27  8.5
GI-14627172_3 gi-14627172_3.seq Continuation (3 of 8) of gi-1462...    27  8.5
GI-14627172_8 gi-14627172_8.seq Continuation (8 of 8) of gi-1462...    27  8.5
GI-7276232_1 gi-7276232_1.seq Continuation (1 of 6) of gi-727623...    26  9.3

>GI-14389432_07 gi-14389432_07.seq Continuation (7 of 11) of
            gi-14389432 from base 600001
          Length = 110000

 Score = 30.4 bits (60), Expect = 0.92
 Identities = 15/41 (36%), Positives = 21/41 (50%)
 Frame = +2 / +1

                                                     
Query: 566  TNTTIVSSLHERMKGVPRPAISFLPDRVACPISFRRTPTAS 688
            ++ +I SS +ER      P I FLP   AC  +   TP+ S
Sbjct: 7462 SSASIASSGYERKSEDSGPVIVFLPREAACFTNSEETPSFS 7584


>GI-14389432_06 gi-14389432_06.seq Continuation (6 of 11) of gi-14389432
              from base 500001
          Length = 110000

 Score = 30.4 bits (60), Expect = 0.92
 Identities = 15/41 (36%), Positives = 21/41 (50%)
 Frame = +2 / +2

                                                       
Query: 566    TNTTIVSSLHERMKGVPRPAISFLPDRVACPISFRRTPTAS 688
              ++ +I SS +ER      P I FLP   AC  +   TP+ S
Sbjct: 107462 SSASIASSGYERKSEDSGPVIVFLPREAACFTNSEETPSFS 107584


>GI-14318439_10 gi-14318439_10.seq Continuation (10 of 11) of
             gi-14318439 from base 900001
          Length = 110000

 Score = 29.9 bits (59), Expect = 1.3
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +3 / -1

                                                            
Query: 564   LPTQPLCPVCTSA*KEYLAPQYHFSLTA*PAQSRSGVLPLRPKALAS 704
             LP +PL P  T +    +  +Y+  L       ++G+ PL+P A  S
Sbjct: 38126 LPLEPLKPTATGSANHLVREEYNQGLHPSNGAIQTGLQPLKPTATGS 37986


>GI-14270686_6 gi-14270686_6.seq Continuation (6 of 9) of gi-14270686
             from base 500001
          Length = 110000

 Score = 28.6 bits (56), Expect(2) = 3.1
 Identities = 7/22 (31%), Positives = 16/22 (71%)
 Frame = +1 / -3

                                   
Query: 457   NHNNHFPLHYNNHSGRLSNHND 522
             N+++H+ LH+++ S + +N N 
Sbjct: 25482 NNDHHYHLHHSSSSSKTTNTNS 25417


 Score = 27.2 bits (53), Expect = 8.5
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +2 / -2

                            
Query: 824   RSHPLQRLCTPHLTT 868
             ++HP+Q LCT HL T
Sbjct: 82597 KNHPMQ*LCTVHLET 82553


 Score = 17.6 bits (32), Expect(2) = 3.1
 Identities = 4/14 (28%), Positives = 7/14 (49%)
 Frame = +1 / -2

                           
Query: 535   YHPIHSLKLTYQHN 576
             Y P   ++ T +H 
Sbjct: 25318 YFPYGIIEFTLKHE 25277


>GI-6319247 gi|6319247|ref|NC_001133.1| Saccharomyces cerevisiae
             chromosome I, complete chro
          Length = 230203

 Score = 28.6 bits (56), Expect = 3.3
 Identities = 12/36 (33%), Positives = 17/36 (46%)
 Frame = +1 / -2

                                                 
Query: 514   HNDPFPCYHPIHSLKLTYQHNHCVQSARAHERSTSP 621
             H+  +PCYH I    L +Q     Q AR  ++   P
Sbjct: 61494 HHQLWPCYHRIELSPLVHQQK*RGQDAR*SDQPAGP 61387


>GI-14389432_01 gi-14389432_01.seq Continuation (1 of 11) of gi-14389432
             from base 1
          Length = 110000

 Score = 28.6 bits (56), Expect = 3.3
 Identities = 11/29 (37%), Positives = 16/29 (54%)
 Frame = +1 / +1

                                          
Query: 670   AYSHCVLKPWPPVVVGSLIRVSARRTNGN 756
             AY HC+L+P  P  +G +   S    +GN
Sbjct: 65842 AYLHCLLRPGDPKRIGHIRAYSLSVVSGN 65928


>GI-7276232_2 gi-7276232_2.seq Continuation (2 of 6) of gi-7276232 from
             base 100001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.5
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -3 / -2

                       
Query: 781   RGWERNKGGC 752
             RGWERN G C
Sbjct: 18073 RGWERNSGSC 18044


 Score = 26.7 bits (52), Expect(2) = 4.1
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1 / +3

                                
Query: 529   PCYHPIHSLKLTYQHNHCV 585
             PCY  +H+L L+  H  C+
Sbjct: 43539 PCYQILHTLILSTLHRKCI 43595


 Score = 18.9 bits (35), Expect(2) = 4.1
 Identities = 6/17 (35%), Positives = 9/17 (52%)
 Frame = +1 / +2

                              
Query: 487   NNHSGRLSNHNDPFPCY 537
             NN+S   +    P+P Y
Sbjct: 43367 NNNSASSATSTAPYPVY 43417


>GI-14318434_11 gi-14318434_11.seq Continuation (11 of 11) of
             gi-14318434 from base 1000001
          Length = 90937

 Score = 28.1 bits (55), Expect(2) = 4.2
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -1 / -1

                                      
Query: 627   IAGRGTPFMRSCRLDTMVVLVSEFQ 553
             I G+  PF+R C+    +V+V EF+
Sbjct: 46489 IIGQTIPFLRECQSQLDIVIVPEFK 46415


 Score = 17.6 bits (32), Expect(2) = 4.2
 Identities = 4/5 (80%), Positives = 5/5 (100%)
 Frame = -2 / -2

                  
Query: 482   CSGKW 468
             C+GKW
Sbjct: 46284 CNGKW 46270


>GI-6862570_4 gi-6862570_4.seq Continuation (4 of 6) of gi-6862570 from
             base 300001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.5
 Identities = 16/44 (36%), Positives = 22/44 (49%)
 Frame = -2 / +2

                                                         
Query: 710   TTGGQGFRTQWEYAGTRLGRLRGQGEMILRGEVLLSCARADWTQ 579
             T  GQ + T W Y   RLG  R    + L+G +L+   R+D  Q
Sbjct: 51545 TKFGQTWGTSWNY*I*RLGMKRLILLIFLKGNLLIEVTRSDKLQ 51676


>GI-14277709_4 gi-14277709_4.seq Continuation (4 of 7) of gi-14277709
             from base 300001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.5
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1 / -3

                                      
Query: 454   SNHNNHFPLHYNNHSGRLSNHNDPF 528
             SNH+NH     NN+    +NHN+ +
Sbjct: 37206 SNHSNHSNHSNNNNHSNHNNHNNNY 37132


>GI-14318450 gi|14318450|ref|NC_001138.2| Saccharomyces cerevisiae
              chromosome VI, complete ch
          Length = 270148

 Score = 27.6 bits (54), Expect = 6.2
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +2 / -3

                             
Query: 872    PCRFCHLC*AITLRK 916
              PC FCH+C*  +L K
Sbjct: 147581 PCLFCHIC*IYSLVK 147537


>GI-14627172_2 gi-14627172_2.seq Continuation (2 of 8) of gi-14627172
             from base 100001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.2
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +3 / +3

                                               
Query: 636   SLTA*PAQSRSGVLPLRPKALASRGRRKPHQGIR 737
             S TA*  ++   VLPL+P   AS+  +K   G+R
Sbjct: 11190 SCTA*AKRTLLSVLPLKPIENASKPNKKKSIGVR 11291


>GI-14318439_09 gi-14318439_09.seq Continuation (9 of 11) of gi-14318439
             from base 800001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.2
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +2 / -3

                                                
Query: 647   VACPISFRRTPTAS*SLGLPWSSEASSGYPLAALM 751
             V+ PI  +  PT+S SL   WSS       LA L+
Sbjct: 78837 VSTPIE*KNVPTSSFSLSSGWSSATIGAPSLAFLL 78733


>GI-14277709_3 gi-14277709_3.seq Continuation (3 of 7) of gi-14277709
             from base 200001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.2
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1 / -2

                             
Query: 535   YHPIHSLKLTYQHNHC 582
             Y P HSL + Y H HC
Sbjct: 73858 YEPHHSLVVLYNHLHC 73811


>GI-6324971_05 gi-6324971_05.seq Continuation (5 of 10) of gi-6324971
             from base 400001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.5
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +1 / -3

                                      
Query: 544   IHSLKLTYQHNHCVQSARAHERSTS 618
             IHS  LTY H H    + +H +  S
Sbjct: 62448 IHSHTLTYSHTHSHTHSHSHTKDNS 62374


>GI-6323501_03 gi-6323501_03.seq Continuation (3 of 10) of gi-6323501
             from base 200001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.5
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1 / +3

                                        
Query: 654   QATRSGRNDIAGRGTPFMRSCRLDTMV 574
             QAT   RN I  R TP   SC+++T++
Sbjct: 16134 QATLMLRNTIQPRSTPPPISCKINTII 16214


>GI-14627172_3 gi-14627172_3.seq Continuation (3 of 8) of gi-14627172
             from base 200001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1 / -2

                             
Query: 652   LPNLVPAYSHCVLKPW 699
             LPNL P ++ C+L P+
Sbjct: 73786 LPNLKPRFAKCILSPY 73739


>GI-14627172_8 gi-14627172_8.seq Continuation (8 of 8) of gi-14627172
             from base 700001
          Length = 45444

 Score = 27.2 bits (53), Expect = 8.5
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -1 / +2

                                           
Query: 678   GVRRNEIGQATRSGRNDIAGRGTPFMRSCR 589
             G R +  G++ RSGR+    R +   RSCR
Sbjct: 14861 GCRSSRCGRSCRSGRSSRGCRSSRCGRSCR 14950


 Score = 27.2 bits (53), Expect = 8.5
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -1 / +2

                                           
Query: 678   GVRRNEIGQATRSGRNDIAGRGTPFMRSCR 589
             G R +  G++ RSGR+    R +   RSCR
Sbjct: 14807 GCRSSRCGRSCRSGRSSRGCRSSRCGRSCR 14896


>GI-7276232_1 gi-7276232_1.seq Continuation (1 of 6) of gi-7276232 from
             base 1
          Length = 110000

 Score = 26.3 bits (51), Expect(2) = 9.3
 Identities = 8/27 (29%), Positives = 15/27 (54%)
 Frame = +1 / -2

                                        
Query: 532   CYHPIHSLKLTYQHNHCVQSARAHERS 612
             C+HP + + +  +H+      R H+RS
Sbjct: 44215 CHHPTNEILILSRHSRTQPCLRHHQRS 44135


 Score = 18.0 bits (33), Expect(2) = 9.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2 / -1

                            
Query: 680   TAS*SLGLPWSSEAS 724
             T++ S G   SSEAS
Sbjct: 44015 TSTCSAGTSQSSEAS 43971


  Database: /home/pmiguel/yeast/yeast
    Posted date:  Oct 27, 2001  2:26 PM
  Number of letters in database: 13,206,306
  Number of sequences in database:  122
  
Lambda     K      H
   0.318    0.135    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 16931922
Number of Sequences: 122
Number of extensions: 197216
Number of successful extensions: 13485
Number of sequences better than 10.0: 19
length of query: 310
length of database: 4,402,102
effective HSP length: 44
effective length of query: 265
effective length of database: 4,396,734
effective search space: 1165134510
effective search space used: 1165134510
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 53 (27.2 bits)