TBLASTX 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCPvsSce/blast/0941_H08_O15ZS5.seq
         (925 letters)

Database: /home/pmiguel/yeast/yeast
           122 sequences; 13,206,306 total letters

Searching............................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

GI-7276232_6 gi-7276232_6.seq Continuation (6 of 6) of gi-727623...    32  0.26
GI-14389432_04 gi-14389432_04.seq Continuation (4 of 11) of gi-1...    31  0.48
GI-6323501_08 gi-6323501_08.seq Continuation (8 of 10) of gi-632...    30  0.92
GI-7839148_10 gi-7839148_10.seq Continuation (10 of 16) of gi-78...    29  1.7
GI-7839148_12 gi-7839148_12.seq Continuation (12 of 16) of gi-78...    29  3.3
GI-7276232_5 gi-7276232_5.seq Continuation (5 of 6) of gi-727623...    29  3.3
GI-6322016_3 gi-6322016_3.seq Continuation (3 of 5) of gi-632201...    28  4.5
GI-14318434_02 gi-14318434_02.seq Continuation (2 of 11) of gi-1...    28  4.5
GI-7839148_15 gi-7839148_15.seq Continuation (15 of 16) of gi-78...    28  6.2
GI-14318434_08 gi-14318434_08.seq Continuation (8 of 11) of gi-1...    28  6.2
GI-6319247 gi|6319247|ref|NC_001133.1| Saccharomyces cerevisiae ...    27  8.5
GI-7839148_07 gi-7839148_07.seq Continuation (7 of 16) of gi-783...    27  8.5
GI-14627172_2 gi-14627172_2.seq Continuation (2 of 8) of gi-1462...    27  8.5
GI-14389432_08 gi-14389432_08.seq Continuation (8 of 11) of gi-1...    27  8.5

>GI-7276232_6 gi-7276232_6.seq Continuation (6 of 6) of gi-7276232 from
             base 500001
          Length = 76869

 Score = 32.2 bits (64), Expect = 0.26
 Identities = 14/32 (43%), Positives = 20/32 (61%)
 Frame = +2 / +3

                                             
Query: 635   GRSSPASSSHFVYLISCHTYTSSSPCYPFSTL 730
             G SSP SSS F  ++S + Y S+    PF+T+
Sbjct: 34794 GWSSPESSSRFECVVSLNLYCSTRSFKPFATI 34889


>GI-14389432_04 gi-14389432_04.seq Continuation (4 of 11) of gi-14389432
             from base 300001
          Length = 110000

 Score = 31.3 bits (62), Expect = 0.48
 Identities = 13/47 (27%), Positives = 24/47 (50%)
 Frame = +1 / -1

                                                            
Query: 235   YFSGQFSQTCKKFI*AGIQLPKRFWTLSILTMGTTFVLITLLS*HLG 375
             +F       C KF  + +Q    FW  S+L++G +F L+ +   ++G
Sbjct: 86531 FFLHSSENRCTKFRHSHLQASWSFWRKSLLSLGQSFFLLLIFYCYVG 86391


>GI-6323501_08 gi-6323501_08.seq Continuation (8 of 10) of gi-6323501
             from base 700001
          Length = 110000

 Score = 30.4 bits (60), Expect = 0.92
 Identities = 11/31 (35%), Positives = 18/31 (57%)
 Frame = +2 / +3

                                            
Query: 638   RSSPASSSHFVYLISCHTYTSSSPCYPFSTL 730
             +S+ + + HF  L  CH    S+P  P++TL
Sbjct: 83706 KSNDSGNCHFKLLKFCHNLIPSNPVSPYTTL 83798


 Score = 27.2 bits (53), Expect = 8.5
 Identities = 9/22 (40%), Positives = 14/22 (62%)
 Frame = +3 / +2

                                   
Query: 834   TVLRSLHTVWQSVLAESNECDK 899
             T+ +S   +W+S+L E N C K
Sbjct: 38717 TISKSS*NIWKSLLVEKNTCKK 38782


>GI-7839148_10 gi-7839148_10.seq Continuation (10 of 16) of gi-7839148
             from base 900001
          Length = 110000

 Score = 29.5 bits (58), Expect = 1.7
 Identities = 13/42 (30%), Positives = 22/42 (51%)
 Frame = -3 / +1

                                                       
Query: 392   YSIAINPKCYESKVIKTNVVPIVRMDKVQNLFGSWIPAQINF 267
             Y   +N   +++K I    VP+V +D VQ L  +   ++ NF
Sbjct: 10759 YDKKLNSGDFQNKNISLTDVPVVYLDAVQGLLPNKAASKWNF 10884


>GI-7839148_12 gi-7839148_12.seq Continuation (12 of 16) of gi-7839148
             from base 1100001
          Length = 110000

 Score = 28.6 bits (56), Expect = 3.3
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -2 / +3

                                      
Query: 924   SFLIFCTFLYHTHYFLLRRSARQYV 850
             + ++FC   +H H+FLL  +A  YV
Sbjct: 81393 ALIVFCY*PFHHHFFLLASTAFTYV 81467


>GI-7276232_5 gi-7276232_5.seq Continuation (5 of 6) of gi-7276232 from
             base 400001
          Length = 110000

 Score = 28.6 bits (56), Expect = 3.3
 Identities = 11/35 (31%), Positives = 19/35 (53%)
 Frame = -3 / +2

                                                
Query: 617   RENKDKTKRTRETGKHEEGVESGETYGWDEEVGAE 513
             RE+KD++ ++R     E   ES +   W   +GA+
Sbjct: 15167 REHKDRSNKSRMQAMEEYIRESSDQPDWSASIGAD 15271


>GI-6322016_3 gi-6322016_3.seq Continuation (3 of 5) of gi-6322016 from
             base 200001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.5
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3 / +3

                                       
Query: 783   NIFFNKSSLRPLYLAFLTVLRSLHTV 860
             NIF N S  RP++L  +T+L   H +
Sbjct: 72300 NIFLNLSRGRPVFLQEITLLTGFHNM 72377


>GI-14318434_02 gi-14318434_02.seq Continuation (2 of 11) of gi-14318434
             from base 100001
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.5
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = -1 / +3

                             
Query: 166   TLRRWWRRPDGASGTA 119
             T RRWWRR  G S TA
Sbjct: 20832 TYRRWWRRGVGRSITA 20879


>GI-7839148_15 gi-7839148_15.seq Continuation (15 of 16) of gi-7839148
             from base 1400001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.2
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = +3 / -1

                          
Query: 528   LVPPICLP*LYTL 566
             L+PP+CLP +YTL
Sbjct: 71387 LLPPMCLPLMYTL 71349


>GI-14318434_08 gi-14318434_08.seq Continuation (8 of 11) of gi-14318434
             from base 700001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.2
 Identities = 11/21 (52%), Positives = 12/21 (56%)
 Frame = +2 / +3

                                  
Query: 260   HAKSLFEQESNCRKDSGPCPF 322
             H+KS F  E NC  D  P PF
Sbjct: 30801 HSKSPFRPERNCDYDC*PFPF 30863


>GI-6319247 gi|6319247|ref|NC_001133.1| Saccharomyces cerevisiae
              chromosome I, complete chro
          Length = 230203

 Score = 27.2 bits (53), Expect = 8.5
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +2 / -2

                                   
Query: 641    SSPASSSHFVYLISCHTYTSS 703
              +S A SS+ VYLI C + +SS
Sbjct: 192354 TSKAFSSYLVYLIVCSSSSSS 192292


>GI-7839148_07 gi-7839148_07.seq Continuation (7 of 16) of gi-7839148
             from base 600001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.5
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2 / -1

                                       
Query: 638   RSSPASSSHFVYLISCHTYTSSSPCY 715
             R  P ++S F  LISC+   SSS C+
Sbjct: 96950 RPLPFATSLFCLLISCNFIISSSICF 96873


>GI-14627172_2 gi-14627172_2.seq Continuation (2 of 8) of gi-14627172
             from base 100001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.5
 Identities = 17/37 (45%), Positives = 21/37 (55%)
 Frame = +2 / -1

                                                  
Query: 644   SPASSSHFVYLISCHTYTSSSPCYPFSTLPALSS*DS 754
             S +SSS FV L S  + +SSS     S  P+ SS* S
Sbjct: 96668 SSSSSSRFVSLSSVFSSSSSSSSAASSASPSPSS*SS 96558


>GI-14389432_08 gi-14389432_08.seq Continuation (8 of 11) of gi-14389432
             from base 700001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.5
 Identities = 8/17 (47%), Positives = 15/17 (88%)
 Frame = +1 / +2

                              
Query: 772   TMHTTSFLISRLFARCI 822
             T++  ++L+SR+FA+CI
Sbjct: 48434 TLNRLTYLVSRIFAKCI 48484


  Database: /home/pmiguel/yeast/yeast
    Posted date:  Oct 27, 2001  2:26 PM
  Number of letters in database: 13,206,306
  Number of sequences in database:  122
  
Lambda     K      H
   0.318    0.135    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 19769530
Number of Sequences: 122
Number of extensions: 237015
Number of successful extensions: 15646
Number of sequences better than 10.0: 14
length of query: 308
length of database: 4,402,102
effective HSP length: 44
effective length of query: 263
effective length of database: 4,396,734
effective search space: 1156341042
effective search space used: 1156341042
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 53 (27.2 bits)