TBLASTX 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCPvsSce/blast/0941_H12_O23ZS5.seq
         (928 letters)

Database: /home/pmiguel/yeast/yeast
           122 sequences; 13,206,306 total letters

Searching............................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

GI-7276232_1 gi-7276232_1.seq Continuation (1 of 6) of gi-727623...    34  0.099
GI-6862570_2 gi-6862570_2.seq Continuation (2 of 6) of gi-686257...    33  0.19
GI-14627172_1 gi-14627172_1.seq Continuation (1 of 8) of gi-1462...    25  0.33
GI-6323989_5 gi-6323989_5.seq Continuation (5 of 8) of gi-632398...    30  0.92
GI-14277709_6 gi-14277709_6.seq Continuation (6 of 7) of gi-1427...    30  0.92
GI-14318439_08 gi-14318439_08.seq Continuation (8 of 11) of gi-1...    30  1.3
GI-14318439_04 gi-14318439_04.seq Continuation (4 of 11) of gi-1...    29  1.7
GI-6323501_03 gi-6323501_03.seq Continuation (3 of 10) of gi-632...    29  2.4
GI-7839148_09 gi-7839148_09.seq Continuation (9 of 16) of gi-783...    29  3.3
GI-14627172_4 gi-14627172_4.seq Continuation (4 of 8) of gi-1462...    29  3.3
GI-14627172_3 gi-14627172_3.seq Continuation (3 of 8) of gi-1462...    29  3.3
GI-14270686_7 gi-14270686_7.seq Continuation (7 of 9) of gi-1427...    29  3.3
GI-14389432_01 gi-14389432_01.seq Continuation (1 of 11) of gi-1...    28  4.5
GI-14318439_11 gi-14318439_11.seq Continuation (11 of 11) of gi-...    28  6.2
GI-6323989_3 gi-6323989_3.seq Continuation (3 of 8) of gi-632398...    28  6.2
GI-6323989_6 gi-6323989_6.seq Continuation (6 of 8) of gi-632398...    27  7.1
GI-6323989_7 gi-6323989_7.seq Continuation (7 of 8) of gi-632398...    25  7.1
GI-6319247 gi|6319247|ref|NC_001133.1| Saccharomyces cerevisiae ...    27  8.5
GI-6862570_5 gi-6862570_5.seq Continuation (5 of 6) of gi-686257...    27  8.5
GI-6324971_07 gi-6324971_07.seq Continuation (7 of 10) of gi-632...    27  8.5
GI-14389432_04 gi-14389432_04.seq Continuation (4 of 11) of gi-1...    27  8.5
GI-14318439_10 gi-14318439_10.seq Continuation (10 of 11) of gi-...    27  8.5
GI-6862570_6 gi-6862570_6.seq Continuation (6 of 6) of gi-686257...    27  8.5

>GI-7276232_1 gi-7276232_1.seq Continuation (1 of 6) of gi-7276232 from
             base 1
          Length = 110000

 Score = 33.6 bits (67), Expect = 0.099
 Identities = 16/57 (28%), Positives = 29/57 (50%)
 Frame = -3 / -1

                                                                      
Query: 221   LDYDHKSSPLNHSNHHKLIVMHEIALHEVDIPDMALPEIVLLEIALPAFFRRSPESV 51
             L    K   L+H+      ++H +  H+V+I DM + + VL  I   AFF+ + + +
Sbjct: 50150 LQLQDKKGVLSHTLFALDSILHIVRAHKVEINDMDIMKPVLRPIVYMAFFKHTSDDL 49980


>GI-6862570_2 gi-6862570_2.seq Continuation (2 of 6) of gi-6862570 from
             base 100001
          Length = 110000

 Score = 32.7 bits (65), Expect = 0.19
 Identities = 8/15 (53%), Positives = 12/15 (79%)
 Frame = +1 / -1

                            
Query: 151   ISCITINLWWLEWFR 195
             I C++I +WW +WFR
Sbjct: 85142 ILCLSITIWWYQWFR 85098


>GI-14627172_1 gi-14627172_1.seq Continuation (1 of 8) of gi-14627172
             from base 1
          Length = 110000

 Score = 25.3 bits (49), Expect(2) = 0.33
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3 / -1

                              
Query: 606   QFSAPCPLMSSPMHTAS 656
             +F  PCP + SP H+ S
Sbjct: 35237 RFPKPCPALFSPHHSTS 35187


 Score = 24.4 bits (47), Expect(2) = 0.33
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +2 / -3

                                   
Query: 560   KTNANSMVSHIAGKNSILGALP 625
             KT  N + + I G  S LGALP
Sbjct: 35322 KTRHNFIANTIFGTQSGLGALP 35257


>GI-6323989_5 gi-6323989_5.seq Continuation (5 of 8) of gi-6323989 from
             base 400001
          Length = 110000

 Score = 30.4 bits (60), Expect = 0.92
 Identities = 10/21 (47%), Positives = 11/21 (51%)
 Frame = -3 / +1

                                  
Query: 236   RRCSHLDYDHKSSPLNHSNHH 174
             R   HL YDH     NH +HH
Sbjct: 53908 RETLHLSYDHDHKRQNHPHHH 53970


>GI-14277709_6 gi-14277709_6.seq Continuation (6 of 7) of gi-14277709
             from base 500001
          Length = 110000

 Score = 30.4 bits (60), Expect = 0.92
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +3 / -3

                                            
Query: 84    EGNLKKNNLRQGHIRDVNLMQGNLMHHNQLM 176
             E  LK  NL +  + ++N  QGN++ +++LM
Sbjct: 36903 EYKLKLKNLEKRLLEELNNSQGNMLENDELM 36811


>GI-14318439_08 gi-14318439_08.seq Continuation (8 of 11) of gi-14318439
             from base 700001
          Length = 110000

 Score = 29.9 bits (59), Expect = 1.3
 Identities = 14/39 (35%), Positives = 21/39 (52%)
 Frame = +1 / +1

                                                    
Query: 70    LKKAGRAISRRTISGRAISGMSTSCRAISCITINLWWLE 186
             LKK G  +    +  RA S +ST+C   + IT  L+W +
Sbjct: 76915 LKK*G*KLFNYRVDSRATSNVSTACDQQTSITNILYWFQ 77031


>GI-14318439_04 gi-14318439_04.seq Continuation (4 of 11) of gi-14318439
             from base 300001
          Length = 110000

 Score = 29.5 bits (58), Expect = 1.7
 Identities = 17/57 (29%), Positives = 27/57 (46%)
 Frame = -3 / -2

                                                                      
Query: 770   TFFRRLEKLRKDILNELGREYSQTPLPC*IEGFELLS*RCRMHWR*HQRARRRELSS 600
             T  R    L+K +   L  + SQT L    +   +  *+ R  WR H++ ++R  SS
Sbjct: 47527 TVLRAARCLQKHLYKILAGQDSQTRLTFPKKDISVQK*KARKPWRNHRQRKKRRSSS 47357


>GI-6323501_03 gi-6323501_03.seq Continuation (3 of 10) of gi-6323501
             from base 200001
          Length = 110000

 Score = 29.0 bits (57), Expect = 2.4
 Identities = 10/38 (26%), Positives = 21/38 (54%)
 Frame = +2 / -1

                                                   
Query: 278   ITRLNSQTFPILNIVQMSATRVHLYQNAIISPLWNINA 391
             +TR + Q FP+    Q++ + + L+    +S  WN+ +
Sbjct: 91430 LTRFSHQQFPL*TFHQIAGSHLQLFSAQRLSGTWNLES 91317


>GI-7839148_09 gi-7839148_09.seq Continuation (9 of 16) of gi-7839148
             from base 800001
          Length = 110000

 Score = 28.6 bits (56), Expect = 3.3
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1 / -2

                        
Query: 157   CITINLWWLEW 189
             C+ ++LWW EW
Sbjct: 17089 CVELHLWWFEW 17057


>GI-14627172_4 gi-14627172_4.seq Continuation (4 of 8) of gi-14627172
            from base 300001
          Length = 110000

 Score = 28.6 bits (56), Expect = 3.3
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +2 / +3

                             
Query: 362  IISPLWNINAHSVMYMI 412
            ++S +WN N H +MYM+
Sbjct: 4161 VLSDVWNSNPHLLMYMV 4211


>GI-14627172_3 gi-14627172_3.seq Continuation (3 of 8) of gi-14627172 from
              base 200001
          Length = 110000

 Score = 28.6 bits (56), Expect = 3.3
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +2 / +1

                               
Query: 362    IISPLWNINAHSVMYMI 412
              ++S +WN N H +MYM+
Sbjct: 104161 VLSDVWNSNPHLLMYMV 104211


>GI-14270686_7 gi-14270686_7.seq Continuation (7 of 9) of gi-14270686
             from base 600001
          Length = 110000

 Score = 28.6 bits (56), Expect = 3.3
 Identities = 12/42 (28%), Positives = 22/42 (51%)
 Frame = +2 / +2

                                                       
Query: 350   YQNAIISPLWNINAHSVMYMIQGHIWVQVVNDHGRNVFNDLL 475
             Y N     +  I+AH+ +Y I  HIW++ + +      N+L+
Sbjct: 80483 YHNGSRKSMPPISAHTYIYFIYLHIWLRGI*NLSFRFMNELI 80608


>GI-14389432_01 gi-14389432_01.seq Continuation (1 of 11) of gi-14389432
             from base 1
          Length = 110000

 Score = 28.1 bits (55), Expect = 4.5
 Identities = 12/39 (30%), Positives = 19/39 (47%)
 Frame = -3 / -1

                                                    
Query: 248   HDWDRRCSHLDYDHKSSPLNHSNHHKLIVMHEIALHEVD 132
             HDWD  C+ +D  H S   +     K+  + E++  E D
Sbjct: 61529 HDWDTPCAIIDAGHMSILSDLVPKEKIKEIKELSPEEYD 61413


>GI-14318439_11 gi-14318439_11.seq Continuation (11 of 11) of
             gi-14318439 from base 1000001
          Length = 91284

 Score = 27.6 bits (54), Expect = 6.2
 Identities = 11/30 (36%), Positives = 19/30 (62%)
 Frame = -1 / +2

                                           
Query: 925   WKMNVLTAMDPLLKLIEGALILKRYEGVTQ 836
             W+ +  T +D ++K  E  +ILK  +GVT+
Sbjct: 56963 WQSHPFTVLDSIIKDGELTIILKEKKGVTK 57052


>GI-6323989_3 gi-6323989_3.seq Continuation (3 of 8) of gi-6323989 from
             base 200001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.2
 Identities = 11/29 (37%), Positives = 15/29 (50%)
 Frame = +2 / -2

                                          
Query: 665   EARNPQFNREEEFGSIPFLIHSKYLSLVF 751
             E R  Q  R   FG +PF I   + S++F
Sbjct: 91906 EKRKIQEYRVFSFGELPFFIFFPFFSVIF 91820


>GI-6323989_6 gi-6323989_6.seq Continuation (6 of 8) of gi-6323989 from
             base 500001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.5
 Identities = 8/18 (44%), Positives = 13/18 (71%)
 Frame = -3 / -3

                               
Query: 224   HLDYDHKSSPLNHSNHHK 171
             H + D K+  L+HS+HH+
Sbjct: 38415 HYNTDEKNQKLSHSSHHR 38362


 Score = 25.3 bits (49), Expect(2) = 7.1
 Identities = 10/18 (55%), Positives = 11/18 (60%)
 Frame = +3 / +3

                                
Query: 63     RPPEEGREGNLKKNNLRQ 116
              RP E   EGNLK  N +Q
Sbjct: 105318 RPIER*PEGNLKYTNKKQ 105371


 Score = 19.4 bits (36), Expect(2) = 7.1
 Identities = 5/18 (27%), Positives = 13/18 (71%)
 Frame = +2 / +1

                                
Query: 8      SEASRLEXQRGGLSKHSQ 61
              S  +++  ++GG+S+H +
Sbjct: 105190 SPKNKMGREKGGISEHRE 105243


>GI-6323989_7 gi-6323989_7.seq Continuation (7 of 8) of gi-6323989
            from base 600001
          Length = 110000

 Score = 25.3 bits (49), Expect(2) = 7.1
 Identities = 10/18 (55%), Positives = 11/18 (60%)
 Frame = +3 / +2

                              
Query: 63   RPPEEGREGNLKKNNLRQ 116
            RP E   EGNLK  N +Q
Sbjct: 5318 RPIER*PEGNLKYTNKKQ 5371


 Score = 19.4 bits (36), Expect(2) = 7.1
 Identities = 5/18 (27%), Positives = 13/18 (71%)
 Frame = +2 / +3

                              
Query: 8    SEASRLEXQRGGLSKHSQ 61
            S  +++  ++GG+S+H +
Sbjct: 5190 SPKNKMGREKGGISEHRE 5243


>GI-6319247 gi|6319247|ref|NC_001133.1| Saccharomyces cerevisiae
              chromosome I, complete chro
          Length = 230203

 Score = 27.2 bits (53), Expect = 8.5
 Identities = 10/43 (23%), Positives = 22/43 (50%)
 Frame = +2 / -1

                                                         
Query: 374    LWNINAHSVMYMIQGHIWVQVVNDHGRNVFNDLLSPGQLLIIP 502
              +W +      YM+  ++W  +  + G+N+++   S G L+  P
Sbjct: 203596 VWFLRHIHKPYMLHSNMWRNLSMNTGKNLYSSHFSSGLLVSTP 203468


>GI-6862570_5 gi-6862570_5.seq Continuation (5 of 6) of gi-6862570 from
             base 400001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.5
 Identities = 13/42 (30%), Positives = 21/42 (49%)
 Frame = -3 / +2

                                                       
Query: 902   NGPFVEINRGRPNIEKIRRGNPIKGCVYFSPKASFDIISGVL 777
             N  + E+N  +  +EK ++ + +KG       A FD I  VL
Sbjct: 87305 NAKYQELNNLKTELEKFKKESHVKGLKKEDSDAWFDKIISVL 87430


>GI-6324971_07 gi-6324971_07.seq Continuation (7 of 10) of gi-6324971
             from base 600001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.5
 Identities = 11/29 (37%), Positives = 17/29 (57%)
 Frame = +3 / +2

                                          
Query: 612   SAPCPLMSSPMHTASLGQKLETLNLTGKR 698
             + PCPL SSP H  S+     + +L+ +R
Sbjct: 46778 TTPCPLPSSPCHRPSMA*WFASRSLSTER 46864


>GI-14389432_04 gi-14389432_04.seq Continuation (4 of 11) of gi-14389432
             from base 300001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.5
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = +3 / -1

                               
Query: 345   ISTRTPLFHHYGTLMPIV 398
             I+ +TP+FH +G + P+V
Sbjct: 84935 INVKTPIFHGHGDMDPVV 84882


>GI-14318439_10 gi-14318439_10.seq Continuation (10 of 11) of
             gi-14318439 from base 900001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.5
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -3 / -1

                                             
Query: 224   HLDYDHKSSPLNHSNHHKLIVMHEIALHEVDI 129
             HLD+   SSP+ HS  H ++ + + + + V+I
Sbjct: 97280 HLDHLSCSSPVAHSVEHVMVCLAQTSKYCVEI 97185


>GI-6862570_6 gi-6862570_6.seq Continuation (6 of 6) of gi-6862570 from
             base 500001
          Length = 62639

 Score = 27.2 bits (53), Expect = 8.5
 Identities = 10/43 (23%), Positives = 22/43 (50%)
 Frame = +2 / -1

                                                        
Query: 374   LWNINAHSVMYMIQGHIWVQVVNDHGRNVFNDLLSPGQLLIIP 502
             +W +      YM+  ++W  +  + G+N+++   S G L+  P
Sbjct: 25595 VWFLRHIHKPYMLHSNMWRNLSMNTGKNLYSSHFSSGLLVSTP 25467


  Database: /home/pmiguel/yeast/yeast
    Posted date:  Oct 27, 2001  2:26 PM
  Number of letters in database: 13,206,306
  Number of sequences in database:  122
  
Lambda     K      H
   0.318    0.135    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 25885871
Number of Sequences: 122
Number of extensions: 376704
Number of successful extensions: 20639
Number of sequences better than 10.0: 23
length of query: 309
length of database: 4,402,102
effective HSP length: 44
effective length of query: 264
effective length of database: 4,396,734
effective search space: 1160737776
effective search space used: 1160737776
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 53 (27.2 bits)