TBLASTX 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCPvsSce/blast/1605_A08_A15ZS5.seq
         (949 letters)

Database: /home/pmiguel/yeast/yeast
           122 sequences; 13,206,306 total letters

Searching............................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

GI-14318439_03 gi-14318439_03.seq Continuation (3 of 11) of gi-1...    33  0.19
GI-14270686_6 gi-14270686_6.seq Continuation (6 of 9) of gi-1427...    31  0.69
GI-6323989_7 gi-6323989_7.seq Continuation (7 of 8) of gi-632398...    29  2.4
GI-7839148_10 gi-7839148_10.seq Continuation (10 of 16) of gi-78...    29  3.4
GI-14627172_1 gi-14627172_1.seq Continuation (1 of 8) of gi-1462...    29  3.4
GI-14318434_11 gi-14318434_11.seq Continuation (11 of 11) of gi-...    28  6.3
GI-6324971_03 gi-6324971_03.seq Continuation (3 of 10) of gi-632...    28  6.3
GI-6322016_4 gi-6322016_4.seq Continuation (4 of 5) of gi-632201...    28  6.3
GI-6322016_1 gi-6322016_1.seq Continuation (1 of 5) of gi-632201...    28  6.3
GI-14389432_10 gi-14389432_10.seq Continuation (10 of 11) of gi-...    28  6.3
GI-14318434_10 gi-14318434_10.seq Continuation (10 of 11) of gi-...    28  6.3
GI-14318434_09 gi-14318434_09.seq Continuation (9 of 11) of gi-1...    24  7.2
GI-14318439_04 gi-14318439_04.seq Continuation (4 of 11) of gi-1...    27  8.7
GI-6862570_6 gi-6862570_6.seq Continuation (6 of 6) of gi-686257...    27  8.7

>GI-14318439_03 gi-14318439_03.seq Continuation (3 of 11) of gi-14318439
             from base 200001
          Length = 110000

 Score = 32.7 bits (65), Expect = 0.19
 Identities = 12/19 (63%), Positives = 12/19 (63%)
 Frame = +3 / -1

                                
Query: 690   GHTPGCGRRKPRYSVFFGR 746
             GH PGCGR   RY   FGR
Sbjct: 83690 GHCPGCGRCCKRYFCIFGR 83634


 Score = 27.2 bits (53), Expect = 8.7
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2 / -2

                                
Query: 551    RRPSTDWFASRGPWCLWG 604
              RR  T  F + G WC+WG
Sbjct: 108004 RRSVT*NFVTLGKWCIWG 107951


>GI-14270686_6 gi-14270686_6.seq Continuation (6 of 9) of gi-14270686
             from base 500001
          Length = 110000

 Score = 30.8 bits (61), Expect = 0.69
 Identities = 12/28 (42%), Positives = 13/28 (45%)
 Frame = -3 / -2

                                         
Query: 527   PSYLHHQRRSRTRPPLVPSSGCNLRPPR 444
             P Y HHQ  +R  P   P   C  RP R
Sbjct: 57808 PKYRHHQHHNRQTPQFPPVCICLARPVR 57725


>GI-6323989_7 gi-6323989_7.seq Continuation (7 of 8) of gi-6323989 from
             base 600001
          Length = 110000

 Score = 29.0 bits (57), Expect = 2.4
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +2 / -1

                                             
Query: 530   LCYVGGERRPSTDWFASRGPWCLWGTIYWILC 625
             LC +GG+ R    WF  R  +  W T +   C
Sbjct: 26801 LCRLGGD*RRRRRWFNQRKDYLRWQTCFTFHC 26706


>GI-7839148_10 gi-7839148_10.seq Continuation (10 of 16) of gi-7839148
             from base 900001
          Length = 110000

 Score = 28.6 bits (56), Expect = 3.4
 Identities = 13/34 (38%), Positives = 16/34 (46%)
 Frame = -3 / +3

                                               
Query: 599   KGTTDPETQTSLYSAGAHPLHNTDPSYLHHQRRS 498
             K    P  QTSL      P H  D + LHH++ S
Sbjct: 76857 KNDRTPVQQTSLLHYSPVPCH*IDSNRLHHEKSS 76958


>GI-14627172_1 gi-14627172_1.seq Continuation (1 of 8) of gi-14627172
             from base 1
          Length = 110000

 Score = 28.6 bits (56), Expect = 3.4
 Identities = 10/29 (34%), Positives = 18/29 (61%)
 Frame = -3 / +3

                                          
Query: 893   TSRLLECEQCDLCVYSAQTHHALYAASTC 807
             +S+ L C +  LCV++   H+A+  + TC
Sbjct: 79245 SSKELICSRVRLCVFTFPQHYAIKNSKTC 79331


>GI-14318434_11 gi-14318434_11.seq Continuation (11 of 11) of
           gi-14318434 from base 1000001
          Length = 90937

 Score = 27.6 bits (54), Expect = 6.3
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3 / +3

                                
Query: 530 DPSYLHHQRRSRTRPPLVPSS 468
           D  YLHHQ+     PPL+ S+
Sbjct: 477 DDLYLHHQKPLSPLPPLITST 539


>GI-6324971_03 gi-6324971_03.seq Continuation (3 of 10) of gi-6324971
             from base 200001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.3
 Identities = 13/41 (31%), Positives = 17/41 (40%)
 Frame = -3 / +1

                                                      
Query: 623   TVSNKLYPKGTTDPETQTSLYSAGAHPLHNTDPSYLHHQRR 501
             ++  K+ P  TTD       YS+   P H T      H RR
Sbjct: 27010 SLKTKVVPTRTTDNHGWLKRYSSTQRPAHQTKSQGRCHSRR 27132


>GI-6322016_4 gi-6322016_4.seq Continuation (4 of 5) of gi-6322016 from
             base 300001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.3
 Identities = 12/37 (32%), Positives = 19/37 (50%)
 Frame = -1 / -3

                                                  
Query: 565   CTRPALTPYITQTHRTYITSGAAEPAPHSSPLRAATS 455
             CT+   TP  T +  T  +S A  P P SS   ++++
Sbjct: 92757 CTKKTTTPVPTPSSSTTESSSAPVPTPSSSTTESSSA 92647


>GI-6322016_1 gi-6322016_1.seq Continuation (1 of 5) of gi-6322016 from
             base 1
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.3
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2 / +3

                                 
Query: 713   KKATVFSLFRPSQLLLGSMP 772
             K++ +   F PS+L LGS+P
Sbjct: 61167 KRSFITVFFLPSKLFLGSLP 61226


>GI-14389432_10 gi-14389432_10.seq Continuation (10 of 11) of
             gi-14389432 from base 900001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.3
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +3 / +1

                                                
Query: 717   KPRYSVFFGRHNCCWVPCRTGVKR*C*IWTASGCS 821
             K R S++F   + C++ C       C  W A+GCS
Sbjct: 23602 K*RVSLYFKYTSRCFILCSDNSLFLCSTWGATGCS 23706


>GI-14318434_10 gi-14318434_10.seq Continuation (10 of 11) of gi-14318434
              from base 900001
          Length = 110000

 Score = 27.6 bits (54), Expect = 6.3
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3 / +1

                                   
Query: 530    DPSYLHHQRRSRTRPPLVPSS 468
              D  YLHHQ+     PPL+ S+
Sbjct: 100477 DDLYLHHQKPLSPLPPLITST 100539


>GI-14318434_09 gi-14318434_09.seq Continuation (9 of 11) of gi-14318434
             from base 800001
          Length = 110000

 Score = 23.5 bits (45), Expect(2) = 7.2
 Identities = 7/13 (53%), Positives = 11/13 (83%)
 Frame = -3 / +2

                          
Query: 506   RRSRTRPPLVPSS 468
             ++SRT PP +PS+
Sbjct: 60098 KKSRTPPPAIPSA 60136


 Score = 21.2 bits (40), Expect(2) = 7.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3 / +3

                           
Query: 662   VRHHRATRAMLECT 621
             V HHR   A++EC+
Sbjct: 60036 VHHHRHFPAVVECS 60077


>GI-14318439_04 gi-14318439_04.seq Continuation (4 of 11) of
            gi-14318439 from base 300001
          Length = 110000

 Score = 27.2 bits (53), Expect = 8.7
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2 / -3

                              
Query: 551  RRPSTDWFASRGPWCLWG 604
            RR  T  F + G WC+WG
Sbjct: 8004 RRSVT*NFVTLGKWCIWG 7951


>GI-6862570_6 gi-6862570_6.seq Continuation (6 of 6) of gi-6862570 from
             base 500001
          Length = 62639

 Score = 27.2 bits (53), Expect = 8.7
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = +3 / +1

                                      
Query: 756   CWVPCRTGVKR*C*IWTASGCSVKC 830
             C   C  GV   C +W   GC V C
Sbjct: 62509 CGCGCGVGVVCGCGVWVWCGCGVVC 62583


  Database: /home/pmiguel/yeast/yeast
    Posted date:  Oct 27, 2001  2:26 PM
  Number of letters in database: 13,206,306
  Number of sequences in database:  122
  
Lambda     K      H
   0.318    0.135    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 17642396
Number of Sequences: 122
Number of extensions: 250432
Number of successful extensions: 14513
Number of sequences better than 10.0: 14
length of query: 316
length of database: 4,402,102
effective HSP length: 44
effective length of query: 271
effective length of database: 4,396,734
effective search space: 1191514914
effective search space used: 1191514914
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 53 (27.2 bits)