TBLASTX 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCPvsSce/blast/1605_C05_E09ZS5.seq
         (1297 letters)

Database: /home/pmiguel/yeast/yeast
           122 sequences; 13,206,306 total letters

Searching............................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

GI-14318439_06 gi-14318439_06.seq Continuation (6 of 11) of gi-1...    36  0.022
GI-6862570_6 gi-6862570_6.seq Continuation (6 of 6) of gi-686257...    32  0.38
GI-10383748 gi|10383748|ref|NC_001135.2| Saccharomyces cerevisia...    27  0.54
GI-6323989_8 gi-6323989_8.seq Continuation (8 of 8) of gi-632398...    30  0.63
GI-14277709_7 gi-14277709_7.seq Continuation (7 of 7) of gi-1427...    31  0.97
GI-7839148_05 gi-7839148_05.seq Continuation (5 of 16) of gi-783...    24  1.1
GI-14277709_2 gi-14277709_2.seq Continuation (2 of 7) of gi-1427...    30  1.3
GI-6323501_09 gi-6323501_09.seq Continuation (9 of 10) of gi-632...    30  1.8
GI-6323501_10 gi-6323501_10.seq Continuation (10 of 10) of gi-63...    30  1.8
GI-7276232_6 gi-7276232_6.seq Continuation (6 of 6) of gi-727623...    27  3.4
GI-7276232_1 gi-7276232_1.seq Continuation (1 of 6) of gi-727623...    29  3.5
GI-14318439_01 gi-14318439_01.seq Continuation (1 of 11) of gi-1...    25  4.3
GI-6324971_05 gi-6324971_05.seq Continuation (5 of 10) of gi-632...    29  4.8
GI-14318439_08 gi-14318439_08.seq Continuation (8 of 11) of gi-1...    28  6.5
GI-7839148_14 gi-7839148_14.seq Continuation (14 of 16) of gi-78...    28  9.0
GI-7276232_2 gi-7276232_2.seq Continuation (2 of 6) of gi-727623...    28  9.0
GI-14627172_5 gi-14627172_5.seq Continuation (5 of 8) of gi-1462...    28  9.0
GI-14318439_10 gi-14318439_10.seq Continuation (10 of 11) of gi-...    28  9.0

>GI-14318439_06 gi-14318439_06.seq Continuation (6 of 11) of gi-14318439
             from base 500001
          Length = 110000

 Score = 36.3 bits (73), Expect = 0.022
 Identities = 18/63 (28%), Positives = 32/63 (50%)
 Frame = -1 / -1

                                                                         
Query: 706   LCASLHSAARHMTRVTYYI*LVQKSVRSRLTSERDPTIPQG*RNNNINISSKDKGIHTHH 527
             L  +LH   +  T  TYY *    + + ++ + RD  + +  R  +I+ S  D G+ T++
Sbjct: 85085 LPTALHQTVQRPTNKTYYF*TKASADQIQMLASRDQRVKELPRQKHIHYSRVDAGVSTNN 84906

                
Query: 526   SRR 518
             S R
Sbjct: 84905 S*R 84897


>GI-6862570_6 gi-6862570_6.seq Continuation (6 of 6) of gi-6862570 from
             base 500001
          Length = 62639

 Score = 32.2 bits (64), Expect = 0.38
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +2 / +2

                                 
Query: 353   WCVGHCVWGGRMILCIAGVC 412
             WCVG  VW G  + C  GVC
Sbjct: 62576 WCVGVWVWCGVWVWCGCGVC 62635


>GI-10383748 gi|10383748|ref|NC_001135.2| Saccharomyces cerevisiae
           chromosome III, complete c
          Length = 316613

 Score = 27.2 bits (53), Expect(2) = 0.54
 Identities = 9/21 (42%), Positives = 11/21 (51%)
 Frame = -3 / +2

                                
Query: 422 HPTHKPPQYTESSDHPTHNDP 360
           H TH P  +T +  H TH  P
Sbjct: 281 HHTHTPHPHTHTHTHHTHTTP 343


 Score = 24.4 bits (47), Expect(2) = 1.6
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -3 / +3

                                  
Query: 437 HCASLHPTHKPPQYTESSDHPTH 369
           H    H  H P  +T ++ HP H
Sbjct: 12  HPHHTHTPHTPHPHTHTTPHPHH 80


 Score = 23.1 bits (44), Expect(2) = 1.6
 Identities = 12/48 (25%), Positives = 13/48 (27%)
 Frame = -1 / +1

                                                           
Query: 316 THHTRTIQHSTKHHLRRRYCQSTXXXXXXXXXXLPQHIHTARPATTPP 173
           TH      H   HH    +   T             H HT  P T  P
Sbjct: 127 THTHTHTPHPHTHHTHTHHTTPTPHPHPHTTPTPTPHTHTPHPHTPHP 270


 Score = 22.1 bits (42), Expect(2) = 0.54
 Identities = 10/38 (26%), Positives = 12/38 (31%)
 Frame = -3 / +3

                                                 
Query: 521 TCAVPYDNNQTHRTDHST*TTISPQQARHCASLHPTHK 408
           T   P  +  TH     T  T +     H    H TH 
Sbjct: 195 TTPTPTHHTHTHTPHPHTTPTHTTPTHTHTTPTHHTHT 308


 Score = 21.2 bits (40), Expect(3) = 4.5
 Identities = 6/14 (42%), Positives = 8/14 (56%)
 Frame = -3 / +1

                         
Query: 209 THTHSSARHDATHL 168
           T TH++  H  TH 
Sbjct: 106 TPTHTTPTHTHTHT 147


 Score = 21.2 bits (40), Expect(3) = 4.5
 Identities = 10/32 (31%), Positives = 11/32 (34%)
 Frame = -2 / +1

                                           
Query: 135 TQVIKTTPGKNTRPPNXPICTXTGXXPSPQRP 40
           T    TTP  +  P   P  T     P P  P
Sbjct: 169 THTHHTTPTPHPHPHTTPTPTPHTHTPHPHTP 264


 Score = 20.8 bits (39), Expect(3) = 4.5
 Identities = 6/13 (46%), Positives = 6/13 (46%)
 Frame = -1 / +1

                        
Query: 316 THHTRTIQHSTKH 278
           THHT T      H
Sbjct: 4   THHTHTTPTHHTH 42


>GI-6323989_8 gi-6323989_8.seq Continuation (8 of 8) of gi-6323989 from
             base 700001
          Length = 84328

 Score = 29.9 bits (59), Expect(2) = 0.63
 Identities = 17/81 (20%), Positives = 22/81 (26%)
 Frame = -1 / -3

                                                                         
Query: 316   THHTRTIQHSTKHHLRRRYCQSTXXXXXXXXXXLPQHIHTARPATTPPIFHAEGGRIXRA 137
             TH      H   HH    +  +            P H  T  P    P  H         
Sbjct: 84275 THTPHPHPHPHTHHTPHPHPHTHTTPTHTTPTPTPTHHTTPTPHPHTPTHHTHTTPTHHT 84096

                                  
Query: 136   YASHKNNPRKKHSPTKRTYMH 74
             +  H +     H+PT  T  H
Sbjct: 84095 HTPHPHPHTHTHTPTHTTPTH 84033


 Score = 26.3 bits (51), Expect(3) = 1.6
 Identities = 12/43 (27%), Positives = 13/43 (29%)
 Frame = -1 / -2

                                                        
Query: 292   HSTKHHLRRRYCQSTXXXXXXXXXXLPQHIHTARPATTPPIFH 164
             H+   H        T           P H HT  P TTP   H
Sbjct: 84198 HTHHTHTHTHTPHHTHTTPTHTHTPHPHHTHTPHPHTTPTPTH 84070


 Score = 25.8 bits (50), Expect(3) = 7.6
 Identities = 11/39 (28%), Positives = 14/39 (35%)
 Frame = -1 / -2

                                                    
Query: 538   HTHHSRRVLYHMTTIRHTEPTTLHKQLLAPNKPGTVPPY 422
             H  H+     H  T  HT  T  H     P+   T  P+
Sbjct: 84207 HHTHTHHTHTHTHTPHHTHTTPTHTHTPHPHHTHTPHPH 84091


 Score = 21.7 bits (41), Expect(3) = 7.6
 Identities = 6/14 (42%), Positives = 7/14 (49%)
 Frame = -3 / -3

                           
Query: 209   THTHSSARHDATHL 168
             THTH+      TH 
Sbjct: 84071 THTHTPTHTTPTHY 84030


 Score = 21.7 bits (41), Expect(3) = 7.6
 Identities = 12/46 (26%), Positives = 19/46 (41%)
 Frame = -3 / -1

                                                           
Query: 542   NPYTSFTTCAVPYDNNQTHRTDHST*TTISPQQARHCASLHPTHKP 405
             +P+T+ T     + +  TH T H+   T +P         HP   P
Sbjct: 84295 HPHTTPTPTHHTHTHTHTHTTHHTHTHTPTPHPHTPHPHPHPHTTP 84158


 Score = 21.2 bits (40), Expect(3) = 1.6
 Identities = 7/21 (33%), Positives = 9/21 (42%)
 Frame = -3 / -3

                                  
Query: 422   HPTHKPPQYTESSDHPTHNDP 360
             H  H P  +  +   PTH  P
Sbjct: 84245 HTHHTPHPHPHTHTTPTHTTP 84183


 Score = 19.4 bits (36), Expect(2) = 0.63
 Identities = 6/18 (33%), Positives = 10/18 (55%)
 Frame = -3 / -1

                               
Query: 419   PTHKPPQYTESSDHPTHN 366
             PTH    +  ++  PTH+
Sbjct: 84316 PTHTHTPHPHTTPTPTHH 84263


 Score = 19.4 bits (36), Expect(3) = 7.6
 Identities = 5/9 (55%), Positives = 6/9 (66%)
 Frame = -1 / -1

                      
Query: 313   HHTRTIQHS 287
             HHT T  H+
Sbjct: 84151 HHTHTHPHT 84125


 Score = 18.9 bits (35), Expect(3) = 7.6
 Identities = 5/14 (35%), Positives = 7/14 (49%)
 Frame = -3 / -1

                           
Query: 419   PTHKPPQYTESSDH 378
             PTH    +T +  H
Sbjct: 84097 PTHHTHTHTPTPTH 84056


 Score = 18.0 bits (33), Expect(3) = 7.6
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = -1 / -3

                         
Query: 310   HTRTIQHSTKHH 275
             HT T  H+T  H
Sbjct: 84068 HTHTPTHTTPTH 84033


 Score = 18.0 bits (33), Expect(3) = 1.6
 Identities = 7/21 (33%), Positives = 9/21 (42%)
 Frame = -1 / -1

                                  
Query: 538   HTHHSRRVLYHMTTIRHTEPT 476
             H H +    +H  T  HT  T
Sbjct: 84295 HPHTTPTPTHHTHTHTHTHTT 84233


>GI-14277709_7 gi-14277709_7.seq Continuation (7 of 7) of gi-14277709
             from base 600001
          Length = 66445

 Score = 30.8 bits (61), Expect = 0.97
 Identities = 15/50 (30%), Positives = 19/50 (38%)
 Frame = -3 / -1

                                                               
Query: 509   PYDNNQTHRTDHST*TTISPQQARHCASLHPTHKPPQYTESSDHPTHNDP 360
             P+ +  TH T   T  T +     H    HP    P  T +  H TH  P
Sbjct: 66436 PHPHPHTHHTHTHTHHTHTHHTHTHHTHTHPHTTHPHTTPTHPHHTHTTP 66287


 Score = 27.6 bits (54), Expect(2) = 4.6
 Identities = 12/40 (30%), Positives = 15/40 (37%)
 Frame = -1 / -2

                                                     
Query: 538   HTHHSRRVLYHMTTIRHTEPTTLHKQLLAPNKPGTVPPYT 419
             HTHH+    +   T  HT PT        P    T   +T
Sbjct: 66444 HTHHTHTHTHTTPTHTHTTPTHTTPTHTTPTHTHTPHTHT 66325


 Score = 24.0 bits (46), Expect(2) = 8.0
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1 / -2

                           
Query: 316   THHTRTIQHSTKHH 275
             THHT T  H+T  H
Sbjct: 66441 THHTHTHTHTTPTH 66400


 Score = 21.2 bits (40), Expect(2) = 8.0
 Identities = 6/10 (60%), Positives = 6/10 (60%)
 Frame = -1 / -1

                       
Query: 208   HIHTARPATT 179
             H HT  P TT
Sbjct: 66349 HPHTTHPHTT 66320


 Score = 18.5 bits (34), Expect(2) = 4.6
 Identities = 5/14 (35%), Positives = 7/14 (49%)
 Frame = -3 / -1

                           
Query: 419   PTHKPPQYTESSDH 378
             PTH    +T  + H
Sbjct: 66319 PTHPHHTHTTPTPH 66278


>GI-7839148_05 gi-7839148_05.seq Continuation (5 of 16) of gi-7839148
             from base 400001
          Length = 110000

 Score = 24.0 bits (46), Expect(3) = 1.1
 Identities = 7/16 (43%), Positives = 10/16 (61%)
 Frame = +3 / +2

                             
Query: 264   RLLRWCLVECCMVRVW 311
             R + W L+ CC+  VW
Sbjct: 60554 RSISWWLLLCCLFFVW 60601


 Score = 23.5 bits (45), Expect(3) = 1.1
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2 / +2

                                      
Query: 353   WCVGHCVWGGRMILCIAGVCEWGVR 427
             W +    WGGR I+ I+    WG R
Sbjct: 60641 WLL*RRWWGGRWIVDISINILWGYR 60715


 Score = 18.5 bits (34), Expect(3) = 1.1
 Identities = 5/14 (35%), Positives = 12/14 (85%)
 Frame = +2 / +3

                           
Query: 548   ILTRYINIIISLSL 589
             +++  +NI++SLS+
Sbjct: 60780 LVSNVLNIVLSLSI 60821


>GI-14277709_2 gi-14277709_2.seq Continuation (2 of 7) of gi-14277709
             from base 100001
          Length = 110000

 Score = 30.4 bits (60), Expect = 1.3
 Identities = 14/36 (38%), Positives = 19/36 (51%)
 Frame = -1 / -2

                                                 
Query: 523   RRVLYHMTTIRHTEPTTLHKQLLAPNKPGTVPPYTP 416
             RR++  MTTIR       H Q+L+P     +  YTP
Sbjct: 32884 RRIIT*MTTIRRLYAEQHHIQILSPPSNSIMKGYTP 32777


>GI-6323501_09 gi-6323501_09.seq Continuation (9 of 10) of gi-6323501 from
              base 800001
          Length = 110000

 Score = 29.9 bits (59), Expect = 1.8
 Identities = 17/46 (36%), Positives = 24/46 (51%)
 Frame = -2 / +2

                                                            
Query: 831    SISNIKLAS*QRNYDAMSKSLTTVITPPLHAIQLEPSNTYSLSVLV 694
              SIS++ LAS        + +LTT   P   + QL   +T S S+LV
Sbjct: 109625 SISSVPLASGDVTSSLAAHNLTTFSAPSTSSAQLVSKSTTSSSILV 109762


>GI-6323501_10 gi-6323501_10.seq Continuation (10 of 10) of gi-6323501
            from base 900001
          Length = 24430

 Score = 29.9 bits (59), Expect = 1.8
 Identities = 17/46 (36%), Positives = 24/46 (51%)
 Frame = -2 / +1

                                                          
Query: 831  SISNIKLAS*QRNYDAMSKSLTTVITPPLHAIQLEPSNTYSLSVLV 694
            SIS++ LAS        + +LTT   P   + QL   +T S S+LV
Sbjct: 9625 SISSVPLASGDVTSSLAAHNLTTFSAPSTSSAQLVSKSTTSSSILV 9762


>GI-7276232_6 gi-7276232_6.seq Continuation (6 of 6) of gi-7276232 from
             base 500001
          Length = 76869

 Score = 27.2 bits (53), Expect(2) = 3.4
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -3 / -2

                                       
Query: 479   DHST*TTISPQQARHCASLHPTHKPP 402
             +H+T TTI P  + H  ++H    PP
Sbjct: 70241 NHTTPTTIHPSTSYHQPTVHHNRYPP 70164


 Score = 19.4 bits (36), Expect(2) = 3.4
 Identities = 7/19 (36%), Positives = 9/19 (46%)
 Frame = -1 / -2

                                
Query: 328   TKITTHHTRTIQHSTKHHL 272
             T I  HH     + T HH+
Sbjct: 70160 THIQLHHHLPYHYPTIHHV 70104


>GI-7276232_1 gi-7276232_1.seq Continuation (1 of 6) of gi-7276232 from
             base 1
          Length = 110000

 Score = 29.0 bits (57), Expect = 3.5
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -2 / -1

                                      
Query: 918   SDHRHFTNEHPSTQRLTYKNVRVNH 844
             SDHR  TN +PST     K V +NH
Sbjct: 71141 SDHRWKTNPNPST*SKMCKRVDLNH 71067


>GI-14318439_01 gi-14318439_01.seq Continuation (1 of 11) of
           gi-14318439 from base 1
          Length = 110000

 Score = 24.9 bits (48), Expect(2) = 4.3
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -1 / +2

                             
Query: 328 TKITTHHTRTIQHSTKHH 275
           T   THHT T  H+T  H
Sbjct: 17  TPTPTHHTHTHTHTTPTH 70


 Score = 21.2 bits (40), Expect(2) = 4.3
 Identities = 6/13 (46%), Positives = 6/13 (46%)
 Frame = -1 / +2

                        
Query: 214 PQHIHTARPATTP 176
           P H HT     TP
Sbjct: 62  PTHTHTPHHTHTP 100


>GI-6324971_05 gi-6324971_05.seq Continuation (5 of 10) of gi-6324971
             from base 400001
          Length = 110000

 Score = 28.6 bits (56), Expect = 4.8
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = -3 / -2

                                                             
Query: 530   SFTTCAVPYDNNQTHRTDHST*TTISPQQARHCASLHPTHKPPQYTES 387
             S+ + A PY ++ T+   H   T   P    + A  +P H P   + S
Sbjct: 54433 SYHSSAYPYSSSHTYNNYHHRETPPPPPSNGYYAKGYPVHVPENRSNS 54290


>GI-14318439_08 gi-14318439_08.seq Continuation (8 of 11) of gi-14318439
             from base 700001
          Length = 110000

 Score = 28.1 bits (55), Expect = 6.5
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = -3 / +1

                                   
Query: 1094  MSRHCFMILARVHVDRRCANTY 1029
             +SR C + L R+++  RCA+TY
Sbjct: 90034 ISRRCCLYLKRLYLCVRCADTY 90099


>GI-7839148_14 gi-7839148_14.seq Continuation (14 of 16) of gi-7839148
             from base 1300001
          Length = 110000

 Score = 27.6 bits (54), Expect = 9.0
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -3 / -3

                                                 
Query: 950   VSRNTSLSGIYQITAILRTNIPQLNVSPTKTYASIT 843
             + R T L+G+Y     L T   +LN+S    YA+ T
Sbjct: 14139 IIRITHLTGMYFSIPCLETRFAELNISFADLYANST 14032


>GI-7276232_2 gi-7276232_2.seq Continuation (2 of 6) of gi-7276232 from
             base 100001
          Length = 110000

 Score = 27.6 bits (54), Expect = 9.0
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = -2 / -1

                                                   
Query: 957   ATCLT*YLSIWHISDHRHFTNEHPSTQRLTYKNVRVNH 844
             ATC+  Y +  H++   HF   +P   R  ++ +   H
Sbjct: 32084 ATCMGNYPATLHVTSKPHFRRVYPLVPRTLHETLACYH 31971


>GI-14627172_5 gi-14627172_5.seq Continuation (5 of 8) of gi-14627172
             from base 400001
          Length = 110000

 Score = 27.6 bits (54), Expect = 9.0
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2 / +3

                               
Query: 164   VEDGWRRGGPSCVYVLGK 217
             ++D WRR G  C  +LGK
Sbjct: 60066 LKDDWRRMGLDCTVILGK 60119


>GI-14318439_10 gi-14318439_10.seq Continuation (10 of 11) of
             gi-14318439 from base 900001
          Length = 110000

 Score = 27.6 bits (54), Expect = 9.0
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -1 / +1

                                            
Query: 532   HHSRRVLYHMTTIRHTEPTTLHKQLLAPNKP 440
             HHS+         RHT P+ L+  + +P++P
Sbjct: 43333 HHSQHAFRSNHQFRHTCPSLLNNYI*SPSRP 43425


  Database: /home/pmiguel/yeast/yeast
    Posted date:  Oct 27, 2001  2:26 PM
  Number of letters in database: 13,206,306
  Number of sequences in database:  122
  
Lambda     K      H
   0.318    0.135    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 30446528
Number of Sequences: 122
Number of extensions: 389309
Number of successful extensions: 21952
Number of sequences better than 10.0: 18
length of query: 432
length of database: 4,402,102
effective HSP length: 47
effective length of query: 384
effective length of database: 4,396,368
effective search space: 1688205312
effective search space used: 1688205312
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 54 (27.6 bits)